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USGS2001

Influences of introduced plague on North American mammals: Implications from ecology of plague in Asia

Intercontinental movements of invasive species continue to modify the world's ecosystems. The plague bacterium ( Yersinia pestis ) has colonized and altered animal communities worldwide but has received much more attention as a human pathogen. We reviewed studies on the ecology of Y. pestis in ancient foci of central Asia and in western North America, where the bacterium apparently has become established much more recently. Although rodent populations on both continents are affected dramatically by epizootics of plague, the epidemiologically important species of Asia demonstrate resistance in portions of their populations, whereas those of North America are highly susceptible. Individual variation in resistance, which is widespread in Asian rodents and allows a microevolutionary response, has been documented in few North American species of rodents. Plague increases costs of sociality and coloniality in susceptible hosts, increases benefits of disease resistance in general, and increases benefits of adaptability to variable environments for species at higher trophic levels. Prairie dogs ( Cynomys ) epitomize taxa with high risk to plague because prairie dogs have uniformly low resistance to plague and are highly social. Relationships to plague are poorly understood for many North American rodents, but more than one-half of the species of conservation concern occur within the geographic range of plague.

Journal of Mammalogy↗

USGS2018

Rule reversal: Ecogeographical patterns of body size variation in the common treeshrew (Mammalia, Scandentia)

There are a number of ecogeographical “rules” that describe patterns of geographical variation among organisms. The island rule predicts that populations of larger mammals on islands evolve smaller mean body size than their mainland counterparts, whereas smaller‐bodied mammals evolve larger size. Bergmann's rule predicts that populations of a species in colder climates (generally at higher latitudes) have larger mean body sizes than conspecifics in warmer climates (at lower latitudes). These two rules are rarely tested together and neither has been rigorously tested in treeshrews, a clade of small‐bodied mammals in their own order (Scandentia) broadly distributed in mainland Southeast Asia and on islands throughout much of the Sunda Shelf. The common treeshrew, Tupaia glis , is an excellent candidate for study and was used to test these two rules simultaneously for the first time in treeshrews. This species is distributed on the Malay Peninsula and several offshore islands east, west, and south of the mainland. Using craniodental dimensions as a proxy for body size, we investigated how island size, distance from the mainland, and maximum sea depth between the mainland and the islands relate to body size of 13 insular T. glis populations while also controlling for latitude and correlation among variables. We found a strong negative effect of latitude on body size in the common treeshrew, indicating the inverse of Bergmann's rule. We did not detect any overall difference in body size between the island and mainland populations. However, there was an effect of island area and maximum sea depth on body size among island populations. Although there is a strong latitudinal effect on body size, neither Bergmann's rule nor the island rule applies to the common treeshrew. The results of our analyses demonstrate the necessity of assessing multiple variables simultaneously in studies of ecogeographical rules.

Ecology and Evolution↗

USGS2014

Northern bobwhite predator avoidance behavior in response to varying types of threat

The flight behavior and cover use of northern bobwhite (Colinus virginianus) have been examined in several studies, but the current data lack quantitative measures of how bobwhites respond to natural threats. We examined aspects of bobwhite behavior in response to 4 threat categories: researcher, hunter, raptor, and mammal. We found that bobwhite flight distance is best predicted by threat type and covey size, and bobwhite flight speed is best predicted by threat type. Bobwhites flushed by the hunter threat and the raptor threat selected for significantly taller obstruction at landing sites than was randomly available, with average heights of 6.2cm taller (P=0.034), and 38.1cm taller (P<0.001), respectively. Raptor-flushed bobwhites also selected for significantly denser shrub cover (42.2%, P<0.001) and a lower angle of obstruction (70.4 degrees, P<0.001) at landing points than was randomly available. In the process of data collection, we also observed bobwhite roost locations have lower visual height obstruction (7.3cm, P=0.03), lower shrub intercept (10.1%, P=0.02), and greater angles of obstruction (18.5 degrees, P=0.005) than bobwhite diurnal locations; this may facilitate escape from nocturnal mammalian predators. Our results suggest that bobwhite escape strategies and cover use vary among threat types. These results support current management recommendations of creating a patchwork of vegetation covers for bobwhites but also suggest how a more complete understanding of bobwhite behavior would improve management and conservation efforts.

Journal of Wildlife Management↗

USGS2020

Ecological insights from three decades of animal movement tracking across a changing Arctic

The Arctic is entering a new ecological state, with alarming consequences for humanity. Animal-borne sensors offer a window into these changes. Although substantial animal tracking data from the Arctic and subarctic exist, most are difficult to discover and access. Here, we present the new Arctic Animal Movement Archive (AAMA), a growing collection of more than 200 standardized terrestrial and marine animal tracking studies from 1991 to the present. The AAMA supports public data discovery, preserves fundamental baseline data for the future, and facilitates efficient, collaborative data analysis. With AAMA-based case studies, we document climatic influences on the migration phenology of eagles, geographic differences in the adaptive response of caribou reproductive phenology to climate change, and species-specific changes in terrestrial mammal movement rates in response to increasing temperature.

Science↗

USGS2017

Protection of bats (Eptesicus fuscus) against rabies following topical or oronasal exposure to a recombinant raccoon poxvirus vaccine

Rabies is an ancient neglected tropical disease that causes tens of thousands of human deaths and millions of cattle deaths annually. In order to develop a new vaccine for potential use in bats, a reservoir of rabies infection for humans and animals alike, an in silico antigen designer tool was used to create a mosaic glycoprotein (MoG) gene using available sequences from the rabies Phylogroup I glycoprotein. This sequence, which represents strains more likely to occur in bats, was cloned into raccoonpox virus (RCN) and the efficacy of this novel RCN-MoG vaccine was compared to RCN-G that expresses the glycoprotein gene from CVS-11 rabies or luciferase (RCN- luc , negative control) in mice and big brown bats ( Eptesicus fuscus ). Mice vaccinated and boosted intradermally with 1 x 10 7 plaque forming units (PFU) of each RCN-rabies vaccine construct developed neutralizing antibodies and survived at significantly higher rates than controls. No significant difference in antibody titers or survival was noted between rabies-vaccinated groups. Bats were vaccinated either oronasally (RCN-G, RCN-MoG) with 5x10 7 PFU or by topical application in glycerin jelly (RCN-MoG, dose 2x10 8 PFU), boosted (same dose and route) at 46 days post vaccination (dpv), and then challenged with wild-type big brown variant RABV at 65 dpv. Prior to challenge, 90% of RCN-G and 75% of RCN-MoG oronasally vaccinated bats had detectable levels of serum rabies neutralizing antibodies. Bats from the RCN- luc and topically vaccinated RCN-MoG groups did not have measurable antibody responses. The RCN-rabies constructs were highly protective and not significantly different from each other. RCN-MoG provided 100% protection (n = 9) when delivered oronasally and 83% protection (n = 6) when delivered topically; protection provided by the RCN-G construct was 70% (n = 10). All rabies-vaccinated bats survived at a significantly (P ≤ 0.02) higher rate than control bats (12%; n = 8). We have demonstrated the efficacy of a novel, in silico designed rabies MoG antigen that conferred protection from rabies challenge in mice and big brown bats in laboratory studies. With further development, topical or oronasal administration of the RCN-MoG vaccine could potentially mitigate rabies in wild bat populations, reducing spillover of this deadly disease into humans, domestic mammals, and other wildlife.

PLoS Neglected Tropical Diseases↗

USGS2026

Agency approach to allocation of human capital and program composition for human-marine mammal interaction management in the United States

Introduction: Marine mammals have served important and diverse roles throughout human history. Once exploited to near extinction, many species in the United States (U.S.) have recovered dramatically under the Marine Mammal Protection Act (MMPA). The U.S. National Marine Fisheries Service (NMFS) has jurisdiction to administer the MMPA for cetaceans and most pinnipeds. While most take is now prohibited, NMFS still dedicates significant time and resources to protecting and conserving marine mammals. As human populations continue to grow and exploit marine environments, opportunities for human-marine mammal interactions (HMMI) have increased. Resources may fail to keep up with growing needs for conservation investments, so that many agencies struggle to adequately meet social and legal requirements. Methods: This study evaluated NMFS’ approach to addressing HMMI through a mixed-methods (semi-structured interviews, quantitative questionnaire, and facilitated workshops) expert elicitation analysis of resource allocation (i.e., staff time) and priorities of NMFS Science Center (SC) and Regional Office (RO) staff across five geographic regions to understand how employee time is allocated, the degree to which employee time allocation is aligned with self-reported job descriptions, and employee perceptions of actions or investments which would improve their ability to mitigate HMMI. Results and Discussion: SC staff reported spending more time on Biological and Administrative tasks , while RO staff allocated more time to Policy, Social science , and Outreach tasks . SC employees spent less time on Biological tasks than specified by their perceived job descriptions, suggesting resource constraints. Participants identified Biological research and monitoring as top priorities, followed by Policy tasks . Identified actions included increasing research capacity, enhancing enforcement, expanding social science expertise, and improving outreach programs. The study reveals mismatches between mandated activities and available resources, suggesting strategic reallocation or increased funding may benefit the agency in effectively addressing growing HMMI challenges.

Frontiers in Marine Science↗

USGS2000

The current status of amphibian and reptile ecotoxicological research

The extent of research conducted on the effects of contaminants on reptiles and amphibians has been scant compared to that of other vertebrate classes including fishes, birds and mammals. In a review of literature from 1972 until 1998 we found that only about 2.7% of the papers published on ecotoxicology in vertebrates concerned amphibians and 1.4% for reptiles. Most studies on amphibian ecotoxicology were on metals, pesticides, and acid deposition. For reptiles the greatest frequency of papers included metals, organochlorines, and others. In proportion to the taxonomic importance, far more papers were written on turtles than on other reptile orders. Most of the papers dealt with residues and very few dealt with effects of contaminant exposure.

Book chapter↗

USGS2008

Living in Yellowstone's Caldera: A geochemical trophic cascade in elk

Though the geology of earth's rare geothermal environments and their associated microbial communities are intensely studied, less scientific attention has focused on their potential effects through the plant-herbivore-carnivore trophic chain. The west-central portion of Yellowstone National Park contains a 2000-km 2 volcanic caldera with 2- to 60-million-year-old, predominantly rhyolitic, rocks that produce relatively infertile soils. The caldera area contains one of the largest concentrations of active geothermal features in the world, including thousands of geysers, fumaroles , hot springs, and mud pots. In many other chapters of this book, we address the ecological impacts of this unique geology to the ecology of the large mammals that live within the caldera, primarily through the effects of geothermal heat on snow pack. In this chapter, we explore the unique geochemistry of the geothermal environments and the consequences of this geochemistry to elk and perhaps other herbivores that reside within the caldera. These studies were prompted by behavioral and demographic observations of elk during the initial years of our studies that we could not explain and, in turn, led us to formulate hypotheses about potential geochemical influences on elk ecology. Specifically, we contrast the concentrations of fluoride (F) and silica (SiO 2 ) found in the Madison headwaters area with areas on Yellowstone's northern range located approximately 50 km to the northwest, where geothermal features are rare or absent. We then trace the consequences of geochemical differences through abiotic and biotic linkages in the ecosystem.

Book↗

USGS2020

Survival is negatively associated with glucocorticoids in a wild ungulate neonate

It is unknown how ungulate physiological responses to environmental perturbation influence overall population demographics. Moreover, neonatal physiological responses remain poorly studied despite the importance of neonatal survival to population growth. Glucocorticoid (GC) hormones potentially facilitate critical physiological and behavioral responses to environmental perturbations. However, elevated GC concentrations over time may compromise body condition and indirectly reduce survival. We evaluated baseline salivary cortisol (CORT; a primary GC in mammals) concentrations in 19 wild neonatal white-tailed deer ( Odocoileus virginianus ) in a northern (NS) and southern (SS) area in Pennsylvania. After ranking survival models consisting of variables hypothesized to influence neonate survival (i.e. weight, sex), the probability of neonate survival was best explained by CORT concentrations, where elevated CORT concentrations were associated with reduced survival probability to 12 weeks of age. Cortisol concentrations were greater in the SS where predation rates and predator densities were lower. As the first evaluation of baseline CORT concentrations in an ungulate neonate to our knowledge, this is also the first study to demonstrate CORT concentrations are negatively associated with ungulate survival at any life stage. Glucocorticoid hormones could provide a framework in which to better understand susceptibility to mortality in neonatal white-tailed deer.

Integrative Zoology↗

USGS2001

Effects of pre- and postnatal polychlorinated biphenyl exposure on metabolic rate and thyroid hormones of white-footed mice

Energy budgets have proven to be a valuable tool for predicting life history from physiological data in terrestrial vertebrates, yet these concepts have not been applied to the physiological effects of contaminants. Contaminants might affect energy budgets by imposing an additional metabolic cost or by reducing the overall amount of energy taken in; either process will reduce the energy available for production (i.e., growth or reproduction). This study examined whole animal energetic effects of polychlorinated biphenyl (PCB) exposure in white-footed mice ( Peromyscus leucopus ). Exposure to PCBs is known to reduce concentrations of plasma thyroid hormones, and thyroid hormones exert strong control over the rate of energy metabolism in mammals. Peromyscus leucopus that were proven breeders were fed PCBs in their food at 0, 10, and 25 ppm. Through lactation, offspring were exposed to PCB from conception and were maintained on the maternal diet to adulthood. No effects were seen on energy metabolism (O 2 consumption, measured in adulthood) or on growth, but there were large dose-dependent decreases in thyroid hormone concentrations, particularly T 4 . The apparent disparity in our data between unchanged metabolic rates and 50% reductions in T 4 concentrations can be rationalized by noting that free T 3 (the fraction not bound to plasma protein) in treated mice was not significantly different from controls and that metabolism is most strongly influenced by free T 3 . Overall, this study did not demonstrate any energetic consequences of PCB exposure in P. leucopus at dietary concentrations up to 25 ppm.

Environmental Toxicology and Chemistry↗

USGS2003

Surgical implantation of transmitters into fish

Although the Animal Welfare Act does not cover poikilotherms, individual institutions and policies and legal requirements other than the Animal Welfare Act (e.g., the US Public Health Service and the Interagency Research Animal Committee's Principles for the Utilization and Care of Vertebrate Animals Used in Testing, Research, and Training) require the review of projects involving fish by institutional animal care and use committees (IACUCs). IACUCs may, however, lack the knowledge and experience to evaluate fish projects judiciously, especially when the projects are in field settings. Surgeries involving implantation of transmitters and other instruments into the coelom, which now comprise a very common research tool in the study of free-ranging fishes, are examples of surgeries that use a broad spectrum of surgical and anesthetic techniques, some of which would not be considered acceptable for similar work on mammals. IACUCs should apply the standards they would expect to be used for surgeries on homeotherms to surgeries on fish. Surgeons should be carefully trained and experienced. Surgical instruments and transmitters should be sterile. Regulations and laws on the use of drugs in animals should be followed, particularly those concerned with anesthetics and antibiotics used on free-ranging fish. Exceptions to surgical procedures should be made only when circumstances are extreme enough to warrant the use of less than optimal procedures.

ILAR Journal↗

USGS2010

Activity budgets derived from time-depth recorders in a diving mammal

We describe a method to convert continuously collected time–depth data from archival time–depth recorders (TDRs) into activity budgets for a benthic-foraging marine mammal. We used data from 14 TDRs to estimate activity-specific time budgets in sea otters ( Enhydra lutris ) residing near Cross Sound, southeast Alaska, USA. From the TDRs we constructed a continuous record of behavior for each individual over 39–46 days during summer of 1999. Behaviors were classified as foraging (diving to the bottom), other diving (traveling, grooming, interacting), and nondiving (assumed resting). The overall average activity budget (proportion of 24-hr/d) was 0.37 foraging (8.9 hr/d), 0.11 in other diving (2.6 hr/d), and 0.52 nondiving time (12.5 hr/d). We detected significant differences in activity budgets among individuals and between groups within our sample. Historically, the sea otter population in our study area had been expanding and sequentially reoccupying vacant habitat since their reintroduction to the area in the 1960s, and our study animals resided in 2 adjacent yet distinct locations. Males ( n = 5) and individuals residing in recently occupied habitat ( n = 4) spent 0.28–0.30 of their time foraging (6.7–7.2 hr/d), 0.17–0.18 of their time in other diving behaviors (4.1–4.3 hr/d), and 0.53–0.54 of their time resting (12.7–13.0 hr/d). In contrast, females ( n = 9) and individuals residing in longer occupied habitat ( n = 10) spent 0.40 of their time foraging (9.6 hr/d), 0.08–0.09 of their time in other diving behaviors (1.9–2.2 hr/d), and 0.51–0.52 of their time resting (12.2–12.5 hr/d). Consistent with these differences, sea otters residing in more recently occupied habitat captured more and larger clams ( Saxidomus spp., Protothaca spp., Macoma spp., Mya spp., Clinocardium spp.) and other prey, and intertidal clams were more abundant and larger in this area. We found that TDRs provided data useful for measuring activity time budgets and behavior patterns in a diving mammal over long and continuous time periods. Fortuitous contrasts in time budgets between areas where our study animals resided suggest that activity time budgets estimated from TDRs may be a sensitive indicator of population status, particularly in relation to prey availability.

Journal of Wildlife Management↗

USGS2020

How and why is the timing and occurrence of seasonal migrants in the Gulf of Maine changing due to climate?

Plants and animals undergo certain recurring life-cycle events, such as migrations between summer and winter habitats or the annual blooming of plants. Known as phenology, the timing of these events is very sensitive to changes in climate (and changes in one species’ phenology can impact entire food webs and ecosystems). Shifts in phenology have been described as a “fingerprint” of the temporal and spatial responses of wildlife to climate change impacts. Thus, phenology provides one of the strongest indicators of the adaptive capacity of organisms (or the ability of organisms to cope with future environmental conditions). In this study, researchers are exploring how the timing and occurrence of a number of highly migratory marine animals is changing due to a series of climatic and ecological shifts. First, using existing long-term historical data series, they will determine the direction and magnitude of how migration, abundance, or other phenological factors have changed for marine mammals, sea turtles, and fishes that migrate into the Gulf of Maine on a seasonal basis. Because marine animals are inherently difficult to detect, the team will apply dynamic occupancy models to evaluate seasonal migration patterns and habitat use across multiple habitats in the Gulf of Maine region. The project team will also synthesize regional information on a key, ecologically-important prey fish, sandlance, whose timing and abundance is a strong predictor of the occurrence and behavior of predator species targeted in this study as well as a range of other regional fish and wildlife of conservation and management concern. Results from this component of the project will identify coastal fish and wildlife species that are relatively more or less able to adapt and thus potentially vulnerable to climate change; determine the likely primary drivers of those changes; and identify data gaps and future monitoring needs. Ultimately, this information will be available and useful for regional coastal management and adaptation decisions that will allow managers to effectively plan for the future. In a second component of the project, researchers will focus specifically on changes in migration patterns of the endangered North Atlantic right whale. While shifts in the distribution and time of recurring life events are adaptive responses that may help species cope with climate impacts, they can also lead to changes in how species interact with humans. The North Atlantic right whale is one of the most endangered whale species on the planet. In the North Atlantic Ocean, ship strikes and entanglements with commercial fishing gear represent fatal threats to right whales. Recent reports suggest that North Atlantic right whale migration patterns have changed. Many researchers posit that shifts in migration are responsible for recent increases in the overlap between right whales and human activities, especially fishing. To help understand how changes in right whale movements and behaviors may overlap with ship traffic, and thus put the animals at risk of encountering vessels, we will combine right whale habitat models with ship traffic maps. The end result will be a set of maps identifying risk levels.

Gulf of Maine↗

USGS2010

Variation in δ 13 C and δ 15 N diet–vibrissae trophic discrimination factors in a wild population of California sea otters

The ability to quantify dietary inputs using stable isotope data depends on accurate estimates of isotopic differences between a consumer (c) and its diet (d), commonly referred to as trophic discrimination factors (TDFs) and denoted by Δ c-d . At present, TDFs are available for only a few mammals and are usually derived in captive settings. The magnitude of TDFs and the degree to which they vary in wild populations is unknown. We determined δ 13 C and δ 15 N TDFs for vibrissae (i.e., whiskers), a tissue that is rapidly becoming an informative isotopic substrate for ecologists, of a wild population of sea otters for which individual diet has been quantified through extensive observational study. This is one of the very few studies that report TDFs for free-living wild animals feeding on natural diets. Trophic discrimination factors of 2.2 ± 0.7 for δ 13 C and 3.5 ± 0.6 for δ 15 N (mean ± SD) were similar to those reported for captive carnivores, and variation in individual δ 13 C TDFs was negatively but significantly related to sea urchin consumption. This pattern may relate to the lipid-rich diet consumed by most sea otters in this population and suggests that it may not be appropriate to lipid-extract prey samples when using the isotopic composition of keratinaceous tissues to examine diet in consumers that frequently consume lipid-rich foods, such as many marine mammals and seabirds. We suggest that inherent variation in TDFs should be included in isotopically based estimates of trophic level, food chain length, and mixing models used to quantify dietary inputs in wild populations; this practice will further define the capabilities and limitations of isotopic approaches in ecological studies.

Ecological Applications↗

USGS2019

Interactive range‐limit theory (iRLT): An extension for predicting range shifts

A central theme of range‐limit theory (RLT) posits that abiotic factors form high‐latitude/altitude limits, whereas biotic interactions create lower limits. This hypothesis, often credited to Charles Darwin, is a pattern widely assumed to occur in nature. However, abiotic factors can impose constraints on both limits and there is scant evidence to support the latter prediction. Deviations from these predictions may arise from correlations between abiotic factors and biotic interactions, as a lack of data to evaluate the hypothesis, or be an artifact of scale. Combining two tenets of ecology—niche theory and predator–prey theory—provides an opportunity to understand how biotic interactions influence range limits and how this varies by trophic level. We propose an expansion of RLT, interactive RLT (iRLT), to understand the causes of range limits and predict range shifts. Incorporating the main predictions of Darwin's hypothesis, iRLT hypothesizes that abiotic and biotic factors can interact to impact both limits of a species’ range. We summarize current thinking on range limits and perform an integrative review to evaluate support for iRLT and trophic differences along range margins, surveying the mammal community along the boreal‐temperate and forest‐tundra ecotones of North America. Our review suggests that range‐limit dynamics are more nuanced and interactive than classically predicted by RLT. Many (57 of 70) studies indicate that biotic factors can ameliorate harsh climatic conditions along high‐latitude/altitude limits. Conversely, abiotic factors can also mediate biotic interactions along low‐latitude/altitude limits (44 of 68 studies). Both scenarios facilitate range expansion, contraction or stability depending on the strength and the direction of the abiotic or biotic factors. As predicted, biotic interactions most often occurred along lower limits, yet there were trophic differences. Carnivores were only limited by competitive interactions ( n = 25), whereas herbivores were more influenced by predation and parasitism (77%; 55 of 71 studies). We highlight how these differences may create divergent range patterns along lower limits. We conclude by (a) summarizing iRLT; (b) contrasting how our model system and others fit this hypothesis and (c) suggesting future directions for evaluating iRLT.

Journal of Animal Ecology↗

USGS2002

Evaluation of management practices in wetland meadows at Grays Lake National Wildlife Refuge, Idaho, 1997-2000

We assessed the relative values of 4 management practices (idle, late season grazing, fall prescribed burning, and rotation of idle and summer grazing) to biotic resources of the grassland-wetland meadow ecosystem at Grays Lake during 1997-2000. Three replicates of each treatment were randomly assigned to 12 experimental units that bordered the deep emergent marsh. Biotic factors examined included the breeding bird community and abundance, nesting activity and nest success, small mammal abundance, plant community, and annual plant biomass production. Fall burns achieved treatment objectives, removing most residual vegetation across a range of cover types. Objectives for grazing treatments were mostly attained; however, vegetation use levels were insufficient for consistent attainment of treatment objectives. Savannah sparrow, American coot, Canada goose, sandhill crane, mallard, and yellow-headed blackbird were the most common bird species present. Densities of 2 bird species (savannah sparrow and red-winged blackbird) were related to year effect only. The effect of unit on densities of redhead, lesser scaup, ruddy duck, sora, long-billed curlew, and common snipe likely reflects habitat differences among units. Densities of 6 species (eared grebe, canvasback, American coot, American avocet, willet, and common yellowthroat) were related to both year and unit effects. Treatment affected densities of 6 of the 29 species examined (mallard, northern shoveler, cinnamon teal, blue-winged teal, American crow, and yellow-headed blackbird); we found no common trend in response to treatments among those species. Overall, idled habitat did not stand out to be a valuable treatment, whereas grazing tended to have positive responses for a number of species. Burning was more likely to result in reduced bird densities than other treatments. We also describe the distribution of species observations among 8 different habitat types. Of the 23 nesting species sampled in the experimental units, the most common were American coot, sandhill crane, Canada goose, American avocet, mallard, and cinnamon teal. Daily survival rates (DSRs) of dabbling duck nests (all species pooled) were negatively affected by fall grazing. We detected no effects of treatments on DSRs of Canada geese or sandhill crane nests. DSRs for sandhill crane nests were higher in 1998 than in 1999 or 2000 and were slightly higher than that in 1997. DSRs for coot nests were affected by both year and treatment; within-treatment differences among years were extensive, In 1998, when all units were idled, DSRs for coot nests were higher in units assigned to idle treatment than those assigned to fall-grazed or rotation treatment. DSRs for coot nests did not differ among treatment blocks in 1997 (all units idled) or 1999 (first year after treatments). We speculate that compaction of residual vegetation by snowpack reduced any differences between idle and treated units and thus lessened the value of idle habitat for most nesting birds. Nesting densities and nest success rates of Canada geese, dabbling ducks, and sandhill cranes were lower those that reported from Steel's (1952) study in 1949-1950, but differences in habitats and areas searched relative to our study make comparisons difficult. Nest success rates of sandhill cranes also were lower than those reported by Drewien (1973). Declines in nest success probably are related to changes in predator community. We captured 5 species of small mammals (meadow vole, montane vole, deer mouse, vagrant shrew, and ermine). Populations of meadow and montane voles irrupted in 1998 then crashed in spring 1999; the most marked changes were in montane vole numbers. Capture rates of ermine and observation rates for striped skunks and raptors suggested a numerical response (higher recruitment) by these predators to higher prey abundance and possibly distributional shifts (movement into areas of more abundant microtines). We did not detect differences

Report↗

USGS2009

Sexing sirenians: Validation of visual and molecular sex determination in both wild dugongs (Dugong dugon) and Florida manatees (Trichechus manatus latirostris)

Sexing wild marine mammals that show little to no sexual dimorphism is challenging. For sirenians that are difficult to catch or approach closely, molecular sexing from tissue biopsies offers an alternative method to visual discrimination. This paper reports the results of a field study to validate the use of two sexing methods: (1) visual discrimination of sex vs (2) molecular sexing based on a multiplex PCR assay which amplifies the male-specific SRY gene and differentiates ZFX and ZFY gametologues. Skin samples from 628 dugongs (Dugong dugon) and 100 Florida manatees (Trichechus manatus latirostris) were analysed and assigned as male or female based on molecular sex. These individuals were also assigned a sex based on either direct observation of the genitalia and/or the association of the individual with a calf. Individuals of both species showed 93 to 96% congruence between visual and molecular sexing. For the remaining 4 to 7%, the discrepancies could be explained by human error. To mitigate this error rate, we recommend using both of these robust techniques, with routine inclusion of sex primers into microsatellite panels employed for identity, along with trained field observers and stringent sample handling.

Aquatic Mammals↗

USGS2004

A comparison of three methods for assessing raptor diet during the breeding season

Video recording of prey deliveries to nests is a new technique for collecting data on raptor diet, but no thorough comparison of results from traditional methods based on collections of prey remains and pellets has been undertaken. We compared data from these 3 methods to determine relative merits of different methods for assessing raptor diet as part of a study of the breeding-season diet of northern goshawks ( Accipiter gentilis ) in Southeast Alaska. We applied these methods to 5 nests during each of the northern goshawk breeding seasons of 1998 and 1999 and identified 1,540 prey from deliveries, 209 prey from remains, and 209 prey from pellets. The proportions of birds and mammals varied among techniques, as did relative proportions of prey groups and age groups. Prey remains and pellets gave the least-similar diet descriptions. Over 2-day intervals during which data were collected using all 3 methods, prey-delivery data gave more individual prey and prey categories than the 2 other sources of information. We found that prey were not directly tracked in either prey remains or pellets compared with prey delivery videography. Analysis of prey-delivery videography provided the most complete description of diet, and we recommend that studies attempting to describe diet use this technique, at least as part of their methodology.

Alaska↗