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Results for “Evolutionary Ecology”

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At least 325 records · Page 18Linked to original sources
USGS2016

Recurrent hybridization and recent origin obscure phylogenetic relationships within the ‘white-headed’ gull (Larus sp.) complex

Species complexes that have undergone recent radiations are often characterized by extensive allele sharing due to recent ancestry and (or) introgressive hybridization. This can result in discordant evolutionary histories of genes and heterogeneous genomes, making delineating species limits difficult. Here we examine the phylogenetic relationships among a complex group of birds, the white-headed gulls (Aves: Laridae), which offer a unique window into the speciation process due to their recent evolutionary history and propensity to hybridize. Relationships were examined among 17 species (61 populations) using a multilocus approach, including mitochondrial and nuclear intron DNA sequences and microsatellite genotype information. Analyses of microsatellite and intron data resulted in some species-based groupings, although most species were not represented by a single cluster. Considerable allele and haplotype sharing among white-headed gull species was observed; no locus contained a species-specific clade. Despite this, our multilocus approach provided better resolution among some species than previous studies. Interestingly, most clades appear to correspond to geographic locality: our BEAST analysis recovered strong support for a northern European/Icelandic clade, a southern European/Russian clade, and a western North American/ canus clade, with weak evidence for a high latitude clade spanning North America and northwestern Europe. This geographical structuring is concordant with behavioral observations of pervasive hybridization in areas of secondary contact. The extent of allele and haplotype sharing indicates that ecological and sexual selection are likely not strong enough to complete reproductive isolation within several species in the white-headed gull complex. This suggests that just a few genes are driving the speciation process.

Molecular Phylogenetics and Evolution↗
USGS2006

Understanding the genetic effects of recent habitat fragmentation in the context of evolutionary history: Phylogeography and landscape genetics of a southern California endemic Jerusalem cricket (Orthoptera: Stenopelmatidae: Stenopelmatus)

Habitat loss and fragmentation due to urbanization are the most pervasive threats to biodiversity in southern California. Loss of habitat and fragmentation can lower migration rates and genetic connectivity among remaining populations of native species, reducing genetic variability and increasing extinction risk. However, it may be difficult to separate the effects of recent anthropogenic fragmentation from the genetic signature of prehistoric fragmentation due to previous natural geological and climatic changes. To address these challenges, we examined the phylogenetic and population genetic structure of a flightless insect endemic to cismontane southern California, Stenopelmatus 'mahogani' (Orthoptera: Stenopelmatidae). Analyses of mitochondrial DNA sequence data suggest that diversification across southern California began during the Pleistocene, with most haplotypes currently restricted to a single population. Patterns of genetic divergence correlate with contemporary urbanization, even after correcting for (geographical information system) GIS-based reconstructions of fragmentation during the Pleistocene. Theoretical simulations confirm that contemporary patterns of genetic structure could be produced by recent urban fragmentation using biologically reasonable assumptions about model parameters. Diversity within populations was positively correlated with current fragment size, but not prehistoric fragment size, suggesting that the effects of increased drift following anthropogenic fragmentation are already being seen. Loss of genetic connectivity and diversity can hinder a population's ability to adapt to ecological perturbations commonly associated with urbanization, such as habitat degradation, climatic changes and introduced species. Consequently, our results underscore the importance of preserving and restoring landscape connectivity for long-term persistence of low vagility native species. Journal compilation ?? 2006 Blackwell Publishing Ltd.

Molecular Ecology↗
USGS2015

Shaping species with ephemeral boundaries: The distribution and genetic structure of desert tortoise ( Gopherus morafkai ) in the Sonoran Desert region

Aim We examine the role biogeographical features played in the evolution of Morafka's desert tortoise ( Gopherus morafkai ) and test the hypothesis that G. morafkai maintains genetically distinct lineages associated with different Sonoran Desert biomes. Increased knowledge of the past and present distribution of the Sonoran Desert region's biota provides insight into the forces that drive and maintain its biodiversity. Location Sonoran Desert biogeographical region; Sonora and Sinaloa, Mexico and Arizona, USA. Methods We examined wild tortoises from Mexico ( n = 155) and Arizona ( n = 78), spanning their known distribution. We used mtDNA sequences to reconstruct matrilineal relationships and 25 microsatellite (STR) loci for Bayesian analyses of gene flow. We performed clinal analyses on both mtDNA and STR loci to determine the position and amount of introgression where lineages co-occur. We used GIS to assess the association of genetic structuring with ecological features. We used these data in a hypothesis-driven approach to assess different models of how genetic diversity is maintained and distributed in G. morafkai . Results Gopherus morafkai was found to comprise genetically and geographically distinct ‘Sonoran’ and ‘Sinaloan’ lineages. Both lineages occurred in a relatively narrow zone of overlap in Sinaloan thornscrub, where it transitions into Sonoran desertscrub. Limited introgression occurred at the contact zone. The best-fit model suggests that these lineages diverged in parapatry where the distribution of genotypes is environment-dependent and introgression is inhibited by exogenous selection. Main conclusions The historically shifting ecotone between tropical deciduous forest and Sonoran desertscrub appears to be a boundary that fostered divergence between parapatric lineages of tortoises. The sharp genetic cline between the two lineages suggests that periods of isolation in temporary refugia due to Pleistocene climatic cycling influenced divergence. Despite incomplete reproductive isolation, the Sonoran and Sinaloan lineages of G. morafkai are on separate evolutionary trajectories.

Arizona, Sonora↗
USGS2011

Local richness along gradients in the Siskiyou herb flora: R. H. Whittaker revisited

In his classic study in the Siskiyou Mountains (Oregon, USA), one of the most botanically rich forested regions in North America, R. H. Whittaker (1960 ) foreshadowed many modern ideas on the multivariate control of local species richness along environmental gradients related to productivity. Using a structural equation model to analyze his data, which were never previously statistically analyzed, we demonstrate that Whittaker was remarkably accurate in concluding that local herb richness in these late‐seral forests is explained to a large extent by three major abiotic gradients (soils, topography, and elevation), and in turn, by the effects of these gradients on tree densities and the numbers of individual herbs. However, while Whittaker also clearly appreciated the significance of large‐scale evolutionary and biogeographic influences on community composition, he did not fully articulate the more recent concept that variation in the species richness of local communities could be explained in part by variation in the sizes of regional species pools. Our model of his data is among the first to use estimates of regional species pool size to explain variation in local community richness along productivity‐related gradients. We find that regional pool size, combined with a modest number of other interacting abiotic and biotic factors, explains most of the variation in local herb richness in the Siskiyou biodiversity hotspot.

Oregon↗
USGS2005

Decision making with environmental indices

Since Ott's seminal book on environmental indices (1978), the use of indices has expanded into several natural resource disciplines, including ecological studies, environmental policymaking, and agricultural economics. However, despite their increasing use in natural resource disciplines, researchers and public decision makers continue to express concern about validity of these instruments to capture and communicate multidimensional, and sometimes disparate, characteristics of research data and stakeholder interests. Our purpose is to demonstrate how useful indices can be for communicating environmental information to decision makers. We discuss how environmental indices have evolved over four stages: 1) simple; 2) compound multicriteria; 3) the impact matrix and 4) disparate stakeholder management. We provide examples of simple and compound indices that were used by policy decision makers. We then build a framework, called an Impact Matrix (IM), that comprehensively accounts for multiple indices but lets the user decide how to integrate them. The IM was shaped from the concept of a financial risk payoff matrix and applied to ecosystem risk. While the IM offers flexibility, it does not address stakeholder preferences about which index to use. Therefore, the last phase in our evolutionary ladder includes stakeholder indices to specifically address disparate stakeholder preferences. Finally, we assert that an environmental index has the potential to increase resource efficiency, since the number of decision making resources may be reduced, and hence improve upon resource productivity

Book chapter↗
USGS2020

Characterization of the genetic structure of four sucker species in the Klamath River. Final Report

Four species of suckers (family Catostomidae) inhabit the Klamath River Basin of Oregon and California: Lost River suckers (LRS; Deltistes luxatus), shortnose suckers (SNS; Chasmistes brevirostris), Klamath largescale suckers (KLS; Catostomus snyderi), and Klamath smallscale suckers (KSS; Catostomus rimiculus). All but Klamath smallscale suckers are endemic and restricted to the Klamath River Basin where they occur sympatrically in large lakes and reservoirs, including the Lost River and Klamath Lake subbasins (Figure 1; USFWS 2012). Population declines, primarily due to loss or degradation of spawning, rearing, and adult habitat, have resulted in Lost River and shortnose suckers being listed as endangered throughout their entire range under the U.S. Endangered Species Act (USFWS 1988). Continued population declines coupled with failed adult recruitment prompted the USFWS to initiate an assisted rearing program in 2015 as a part of their recovery strategy (Childress et al. 2019). The program was designed to maintain as much genetic diversity as possible while improving recruitment by averting high early life stage mortality (Day et al. 2017). However, while assisted rearing efforts are targeted towards endangered LRS and SNS, species differentiation of larval and juvenile suckers is problematic in the Klamath River Basin. This, in turn, complicates the management of these species as well as the population modeling used to evaluate recovery efforts. Maintaining as much as possible of the genetic resources, or “evolutionary legacy” of a species is a goal common to conservation and endangered species recovery strategies. Inappropriate assumptions regarding species’ evolutionary lineages, and genetic characteristics may lead to the mismanagement of an endangered species through a failure to recognize and appropriately manage species boundaries and genetic population structure. Despite a considerable amount of research, the partitioning of genetic diversity within and among the four species of suckers in the Klamath River Basin remains unclear. Previously developed genetic markers are effective at differentiating some species, but fail to effectively differentiate all four species of suckers in the basin (Tranah et al. 2001; Wagman 2003; Tranah and May 2006; Hoy and Ostberg 2015; Dowling et al. 2016). Peer-reviewed publications describing the morphological characteristics of (Markle et al. 2005) and genetic relationships among (Dowling et al. 2016; Tranah and May 2006) Klamath River Basin suckers have not resolved uncertainties regarding the systematic relationships among the four currently recognized taxa. Specifically, genetic and morphological data generally support LRS and KSS as being distinct entities, but genetic evidence does not support a distinction between KLS and SNS. All three publications above refer to unpublished information regarding ecological differences between KLS and SNS as evidence to support the existence of two entities. However, the authors also acknowledge that overlap in morphological characters (Markle et al. 2005) and a lack of genetic differentiation (Dowling et al. 2016; Tranah and May 2006) between KLS and SNS raises the question of their specific identity. This is particularly problematic in the Lost River subbasin, where overlap in morphological characters between KLS and SNS is greatest. In our opinion, the basis of the strong genetic similarity between KLS and SNS has not been resolved. Morphological characters mostly support the existence of two distinct species, while genetic characters do not (i.e., genetic divergence between KLS and SNS is less than divergence among populations of each species; (Smith et al. 2015). Some have suggested that introgressive hybridization may have resulted in a lack of genetic differentiation between KLS and SNS and a breakdown of monophyletic species (Dowling et al. 2016; Tranah and May 2006), and that this hybridization may be an important process in

California, Oregon↗
USGS2026

Functional traits can explain coordinated seedling responses to drought and freezing stress

Limited plant establishment creates demographic bottlenecks that can alter vegetation trajectories in changing environments, yet it is unclear how common eco-evolutionary indicators of plant strategy shape early response to key stressors. We evaluated how early functional traits, phylogeny, and adult climate niche jointly explain seedling drought and freezing tolerance across 49 semi-arid rangeland species. The best models explained 36% of variation in freezing tolerance (traits only) and 45% of variation in drought tolerance (traits, phylogeny, and climate), identifying both shared and unique indicators of different stress responses. Drought tolerance was explained by rapid root elongation and large seed size, while phylogeny captured additional tolerance within the grass family. Seedling freezing tolerance was linked to rapid root elongation and colder thresholds for root growth, though traits shared some explanatory power with adult climate niche (cold temperature distribution). While stress resistance can be shaped by phylogeny and adaptations to long-term climate regimes, our results elucidate early traits with clearer direct links to establishment capacity under drought and freezing stress, across species. Additional research is needed to understand how variation in stress response strategies across multiple demographic stages (e.g., seeds, seedlings, mature plant) and ecological scales (e.g., within and across species' climate distributions) could affect vegetation distributions and trajectories in changing environments.

Colorado Plateau, Great Basin, western United Stat↗
USGS2015

Generic reclassification and species boundaries in the rediscovered freshwater mussel ‘Quadrula’ mitchelli (Simpson in Dall, 1896)

The Central Texas endemic freshwater mussel, Quadrula mitchelli (Simpson in Dall, 1896), had been presumed extinct until relict populations were recently rediscovered. To help guide ongoing and future conservation efforts focused on Q . mitchelli we set out to resolve several uncertainties regarding its evolutionary history, specifically its unknown generic position and untested species boundaries. We designed a molecular matrix consisting of two loci ( cytochrome c oxidase subunit I and internal transcribed spacer I ) and 57 terminal taxa to test the generic position of Q . mitchelli using Bayesian inference and maximum likelihood phylogenetic reconstruction. We also employed two Bayesian species validation methods to test five a priori species models (i.e. hypotheses of species delimitation). Our study is the first to test the generic position of Q. mitchelli and we found robust support for its inclusion in the genus Fusconaia. Accordingly, we introduce the binomial, Fusconaia mitchelli comb. nov., to accurately represent the systematic position of the species. We resolved F. mitchelli individuals in two well supported and divergent clades that were generally distinguished as distinct species using Bayesian species validation methods, although alternative hypotheses of species delineation were also supported. Despite strong evidence of genetic isolation within F. mitchelli , we do not advocate for species-level status of the two clades as they are allopatrically distributed and no morphological, behavioral, or ecological characters are known to distinguish them. These results are discussed in the context of the systematics, distribution, and conservation of F. mitchelli .

Conservation Genetics↗
USGS2018

Cracking the code of biodiversity responses to past climate change

How individual species and entire ecosystems will respond to future climate change are among the most pressing questions facing ecologists. Past biodiversity dynamics recorded in the paleoecological archives show a broad array of responses, yet significant knowledge gaps remain. In particular, the relative roles of evolutionary adaptation, phenotypic plasticity, and dispersal in promoting survival during times of climate change have yet to be clarified. Investigating the paleo-archives offers great opportunities to understand biodiversity responses to future climate change. In this review we discuss the mechanisms by which biodiversity responds to environmental change, and identify gaps of knowledge on the role of range shifts and tolerance. We also outline approaches at the intersection of paleoecology, genomics, experiments, and predictive models that will elucidate the processes by which species have survived past climatic changes and enhance predictions of future changes in biological diversity.

Trends in Ecology and Evolution↗
USGS2019

Evolutionary history predicts high-impact invasions by herbivorous insects

A long‐standing goal of invasion biology is to identify factors driving highly variable impacts of non‐native species. Although hypotheses exist that emphasize the role of evolutionary history (e.g., enemy release hypothesis & defense‐free space hypothesis), predicting the impact of non‐native herbivorous insects has eluded scientists for over a century. Using a census of all 58 non‐native conifer‐specialist insects in North America, we quantified the contribution of over 25 factors that could affect the impact they have on their novel hosts, including insect traits (fecundity, voltinism, native range, etc.), host traits (shade tolerance, growth rate, wood density, etc.), and evolutionary relationships (between native and novel hosts and insects). We discovered that divergence times between native and novel hosts, the shade and drought tolerance of the novel host, and the presence of a coevolved congener on a shared host, were more predictive of impact than the traits of the invading insect. These factors built upon each other to strengthen our ability to predict the risk of a non‐native insect becoming invasive. This research is the first to empirically support historically assumed hypotheses about the importance of evolutionary history as a major driver of impact of non‐native herbivorous insects. Our novel, integrated model predicts whether a non‐native insect not yet present in North America will have a one in 6.5 to a one in 2,858 chance of causing widespread mortality of a conifer species if established (R2 = 0.91) Synthesis and applications. With this advancement, the risk to other conifer host species and regions can be assessed, and regulatory and pest management efforts can be more efficiently prioritized.

Ecology and Evolution↗
USGS2020

Response to terrestrial nest predators among endemic and introduced Hawaiian birds

Birds free from nest predators for long periods may either lose the ability to recognize and respond to predators or retain antipredator responses if they are not too costly. How these alternate scenarios play out has rarely been investigated in an avian community whose members have different evolutionary histories. We presented models of two nest predators (rat and snake) and a negative control (tree branch) to birds on Hawaiʻi Island. Endemic Hawaiian birds evolved in the absence of terrestrial predators until rats were introduced approximately 1,000 years ago. Introduced birds evolved with diverse predator communities including mammals and snakes, but since their introduction onto the island approximately one century ago have been free from snake predation. We found that (a) endemic and introduced birds had higher agitation scores toward the rat model compared with the branch, and (b) none of the endemic birds reacted to the snake model, while one introduced bird, the Red-billed Leiothrix (Leiothrix lutea), reacted as strongly to the snake as to the rat. Overall, endemic and introduced birds differ in their response to predators, but some endemic birds have the capacity to recognize and respond to introduced rats, and one introduced bird species retained recognition of snake predators from which they had been free for nearly a century, while another apparently lost that ability. Our results indicate that the retention or loss of predator recognition by introduced and endemic island birds is variable, shaped by each species' unique history, ecology, and the potential interplay of genetic drift, and that endemic Hawaiian birds could be especially vulnerable to introduced snake predators.

Hawaii↗
USGS2022

Linking evolutionary potential to extinction risk: Applications and future directions

Extinction-risk assessments play a major role in prioritizing conservation action at national and international levels. However, quantifying extinction risk is challenging, especially when including the full suite of adaptive responses to environmental change. In particular, evolutionary potential (EP), the capacity to evolve genetically based changes that increase fitness under changing conditions, has proven difficult to evaluate, limiting its inclusion in risk assessments. Theory, experiments, simulations, and field studies all highlight the importance of EP in characterizing and mitigating extinction risk. Disregarding EP can therefore result in ineffective allocation of resources and inadequate recovery planning. Fortunately, proxies for EP can be estimated from environmental, phenotypic, and genetic data. Some proxies can be incorporated into quantitative extinction-risk assessments, whereas others better inform basic conservation actions that maximize resilience to future change. Integration of EP into conservation decision-making is challenging but essential and remains an important area for innovation in applied conservation science.

Frontiers in Ecology and the Environment↗
USGS2016

Controls on the geochemical evolution of Prairie Pothole Region lakes and wetlands over decadal time scales

One hundred sixty-seven Prairie Pothole lakes, ponds and wetlands (largely lakes) previously analyzed chemically during the late 1960’s and early to mid-1970’s were resampled and reanalyzed in 2011–2012. The two sampling periods differed climatically. The earlier sampling took place during normal to slightly dry conditions, whereas the latter occurred during and immediately following exceptionally wet conditions. As reported previously in Mushet et al. ( 2015 ), the dominant effect was expansion of the area of these lakes and dilution of their major ions. However, within that context, there were significant differences in the evolutionary pathways of major ions. To establish these pathways, we employed the inverse modeling computer code NetpathXL. This code takes the initial and final lake composition and, using mass balance constrained by the composition of diluting waters, and input and output of phases, calculates plausible geochemical evolution pathways. Despite the fact that in most cases major ions decreased, a subset of the lakes had an increase in SO 4 2− . This distinction is significant because SO 4 2− is the dominant anion in a majority of Prairie Pothole Region wetlands and lakes. For lakes with decreasing SO 4 2− , the proportion of original lake water required for mass balance was subordinate to rainwater and/or overland flow. In contrast, lakes with increasing SO 4 2− between the two sampling episodes tended to be dominated by original lake water. This suite of lakes tended to be smaller and have lower initial SO 4 2− concentrations such that inputs of sulfur from dissolution of the minerals gypsum or pyrite had a significant impact on the final sulfur concentration given the lower dilution factors. Thus, our study provides context for how Prairie Pothole Region water bodies evolve geochemically as climate changes. Because wetland geochemistry in turn controls the ecology of these water bodies, this research contributes to the prediction of the impact of climate change on this important complex of ecosystems.

North Dakota↗
USGS2020

Vegetation sampling and management

What is the utility of vegetation measurements for wildlife managers? In the prairie, savanna, tundra, forest, steppe, and wetland regions of the world, mixtures of plant species provide wildlife with food, cover and, in some circumstances, water; the 3 essential habitat elements necessary to sustain viable wildlife populations. We define habitat in reference to use of a vegetation type by an animal (e.g., deer habitat) and vegetation type when referring to differences in vegetation stands (e.g., marsh vegetation type versus tall grass prairie vegetation type; Hall et al. 1997). In strict definition, the variety of wildlife using plants ranges from snails and voles (Microtus spp.) to bison (Bison bison) and elephants (Loxodonta spp.) in uplands and from mosquitoes and ducks to muskrats (Ondatra zibethicus) and manatees (Trichechus manatus) in wetlands. Through evolutionary processes, some wildlife species are totally dependent on vegetation for all annual life requirements, whereas other species use vegetation only for cover or food. Regardless of the role of vegetation in the sustenance of wildlife, any management or research project that requires evaluation of wildlife and vegetation type relationships on a unit of land will necessitate some form of vegetation measurement. The term vegetation can refer to a single plant or species on a specific site or a community in the landscape. Vegetation may occur naturally or be introduced, and may be live or dead. Uses of vegetation measurements are many: (1) evaluation of vegetation response to management practices, (2) estimation of carrying capacity and/or forage production, (3) characterization of cover and habitat components for an endangered species, or (4) long-term monitoring of the general trend of plant vigor or vegetation type condition. Surveying and measuring quantity and quality of vegetation within habitats are basic to wildlife research and management. Grassland, shrubland, and woodland vegetation types are comprised of populations in which individual plants are usually too numerous to inventory completely. Consequently, wildlife biologists usually use sampling techniques to make inferences about the total plant population within a given vegetation type. Vegetation sampling methodologies have evolved within several ecological disciplines (e.g., plant ecology, forestry, rangeland science) and for a variety of management or research objectives (e.g., estimating forage for ungulates, describing habitat use by passerine birds). Description of every method that has been used to sample vegetation is beyond the scope of this chapter. We describe how to measure vegetation structure, which Dansereau (1957) defined as the spatial organization (distribution) of individuals that form a stand. We have organized this chapter into a description of basic methods of vegetation sampling with examples of how those methods have been applied or modified in wildlife research and management. We assume the investigator/reader has adequate knowledge of the concepts of wildlife ecology, primary habitat requirements of wildlife species under study, and ability to systematically identify the species of wildlife and vascular plants within the geographical area of investigation.

Book chapter↗
USGS2015

If Arctic charr Salvelinus alpinus is “the most diverse vertebrate,” what is the lake charr Salvelinus namaycush?

Teleost fishes are prominent vertebrate models of evolution, illustrated among old-world radiations by the Cichlidae of East African Great Lakes and new-world radiations by the circumpolar Arctic charr Salvelinus alpinus. Herein, we describe variation in lake charr S. namaycush morphology, life history, physiology, and ecology, as another example of radiation. The lake charr is restricted to northern North America, where it originated from glacial refugia and diversified in large lakes. Shallow and deepwater morphs arose in multiple lakes, with a large-bodied shallow-water ‘lean’ morph in shallow inshore depths, a small-bodied mid-water ‘humper’ morph on offshore shoals or banks, and a large-bodied deep-water ‘siscowet’ morph at depths > 100 m. Eye position, gape size, and gillraker length and spacing adapted for feeding on different-sized prey, with piscivorous morphs (leans and siscowets) reaching larger asymptotic size than invertivorous morphs (humpers). Lean morphs are light in color, whereas deepwater morphs are drab and dark, although the pattern is reversed in dark tannic lakes. Morphs shift from benthic to pelagic feeding at a length of 400–490-mm. Phenotypic differences in locomotion, buoyancy, and lipid metabolism evolved into different mechanisms for buoyancy regulation, with lean morphs relying on hydrodynamic lift and siscowet morphs relying on hydrostatic lift. We suggest that the Salvelinus genus, rather than the species S. alpinus, is a diverse genus that should be the subject of comparative studies of processes causing divergence and adaptation among member species that may lead to a more complete evolutionary conceptual model.

Great Bear Lake; Great Slave Lake; Lake Superior; ↗
USGS2015

Life-stage-specific physiology defines invasion extent of a riverine fish

Many ecologists have called for mechanism-based investigations to identify the underlying controls on species distributions. Understanding these controls can be especially useful to construct robust predictions of how a species range may change in response to climate change or the extent to which a non-native species may spread in novel environments. Here, we link spatially intensive observations with mechanistic models to illustrate how physiology determines the upstream extent of the aquatic ectotherm smallmouth bass ( Micropterus dolomieu ) in two headwater rivers. Our results demonstrate that as temperatures become increasingly cold across a downstream to upstream gradient, food consumption in age 0 bass becomes increasingly constrained, and as a result, these fish become growth limited. Sufficient first summer growth of age 0 bass is essential for overwinter survival because young bass must persist from energy reserves accumulated during the summer, and those reserves are determined by body size. Our field data reveal the upstream extent of adult bass reproduction corresponds to a point in the downstream/upstream gradient where cold temperatures impair growth opportunities in young bass. This pattern was repeated in both study streams and explained why bass positioned nests twice as far upstream in the warm compared to the cold stream in the same basin. Placement of spawning nests by adult bass is likely subject to strong evolutionary selection in temperate systems: if bass spawn too far upstream, their young are unlikely to grow large enough to survive the winter. Consumption and growth in older bass (age 3–4) was far less sensitive to temperature. Based on these data, we suggest that temperature-sensitive age 0 bass constrain the upstream distribution limits of bass within temperate streams. In this study, we investigated how temperature-dependent physiology changed through the life history of a species and, in doing so, identified a climate-sensitive life-history stage that likely sets the distributional limits of all other life-history stages. We anticipate the framework developed here could be employed to identify how similar stage-specific environmental sensitivity determines distribution in many other ectothermic species.

Oregon↗
USGS1997

Fish assemblages and environmental correlates in least-disturbed streams of the upper Snake River basin

Fish assemblages and environmental variables were evaluated from 37 least‐disturbed, 1st‐ through 6th‐order streams and springs in the upper Snake River basin, western USA. Data were collected as part of the efforts by the U.S. Geological Survey National Water Quality Assessment Program and the Idaho State University Stream Ecology Center to characterize aquatic biota and associated habitats in least‐disturbed coldwater streams. Geographically, the basin comprises four ecoregions. Environmental variables constituting various spatial scales, from watershed characteristics to instream habitat measures, were used to examine distribution patterns in fish assemblages. Nineteen fish species in the families Salmonidae, Cottidae, Cyprinidae, and Catostomidae were collected. Multivariate analyses showed high overlap in stream fish assemblages among the ecoregions. Major environmental factors determining species distributions in the basin were stream gradient, watershed size, conductivity, and percentage of the watershed covered by forest. Lowland streams (below 1,600 m in elevation), located mostly in the Snake River Basin/High Desert ecoregion, displayed different fish assemblages than upland streams (above 2,000 m elevation) in the Northern Rockies, Middle Rockies, and Northern Basin and Range ecoregions. For example, cottids were not found in streams above 2,000 m in elevation. In addition, distinct fish assemblages were found in tributaries upstream and downstream from the large waterfall, Shoshone Falls, on the Snake River. Fish metrics explaining most of the variation among sites included the total number of species, number of native species, number of salmonid species, percent introduced species, percent cottids, and percent salmonids. Springs also exhibited different habitat conditions and fish assemblages than streams. The data suggest that the evolutionary consequences of geographic features and fish species introductions transcend the importance of ecoregion boundaries on fish distributions in the upper Snake River basin.

Idaho, Oregon, Washington, Wyoming↗
USGS2020

Assessment of population genetics and climatic variability can refine climate‐informed seed transfer guidelines

Restoration guidelines increasingly recognize the importance of genetic attributes in translocating native plant materials (NPMs). However, when species‐specific genetic information is unavailable, seed transfer guidelines use climate‐informed seed transfer zones (CSTZs) as an approximation. While CSTZs may improve how NPMs are developed and/or matched to restoration sites, they overlook genetic factors that can diminish restoration success and/or deteriorate natural patterns of genetic diversity and environmental factors that may introduce unexpected variation. Here, we analyze molecular data and geographic patterns of environmental variability across the western United States and demonstrate how they can refine CSTZs. Using genetic data available for 13 relevant plant species, we found that the probability of mixing genetically differentiated individuals (i.e. from different evolutionary lineages, or populations) was approximately 8% when considering locations separated by 50 km and reached nearly 80% by 500 km, which are distances relevant to ecoregionally constrained CSTZs. Furthermore, climate analyses revealed that geographically proximate locations are likely to maintain environmental similarity, regardless of CSTZ or ecoregion assignment. These results suggest constraining CSTZ‐informed seed transfer decisions by distance may mitigate the opportunity for negative genetic outcomes. Furthermore, environmental variability and/or specificity of NPMs (depending upon the restoration strategy) should be achieved by sourcing NPMs from geographically proximate locations to avoid introducing excessive genetic differentiation. Our results highlight the utility of combining molecular genetic data with other genetic inferences (i.e. of adaptation) to determine how best to transfer seed across restoration species' ranges and develop new restoration materials.

Restoration Ecology↗