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At least 307 records · Page 17Linked to original sources
USGS2020

Estimation of vital population rates to assess the relative health of mussel assemblages in the Upper Mississippi River

Native freshwater mussels are a guild of benthic, filter feeding invertebrates that perform important ecological functions in rivers. Because of their long lifespans (30–50 years or longer), mussels are slow to respond to human‐induced alterations. Thus, development of sensitive indicators of mussel population responses to river conditions and management would be beneficial. Compared to marine species, estimation of vital rates (e.g. survival, growth) in freshwater mussels has received little attention. We placed passively integrated transponder tags on 578 mussels of four species ( Amblema plicata , Cyclonaias pustulosa , Obliquaria reflexa , and Pleurobema sintoxia ) in a well‐studied mussel assemblage in a side channel of the upper Mississippi River. Growth and survival of tagged mussels were assessed annually for 4 years across core (high density) and peripheral (low density) areas of the assemblage. Overall survival was highly variable, ranging from c . 15 to 90%, and was related to life history, habitat quality, and hydrologic events. Survival, which varied significantly among species and over time, was consistently higher in the dense and species‐rich core of the mussel assemblage, relative to the periphery because substrates were consistently more stable in the core of the mussel bed relative to the periphery. Substrate movement during low flows was an order of magnitude lower in the core relative to the periphery, and survival was inversely related to stability of river substrates. Patterns in habitat‐specific survival indicate source–sink population dynamics such that mussels in the core habitat provide recruitment to the periphery, but mussels in the periphery are subject to unsustainably low survival; additional studies to track the source of recruitment in the periphery are needed to test this hypothesis. Growth rate did not vary significantly between core and peripheral areas but did vary by species. Growth rate (proportional change per year) declined with age, and was similar at mean age for A. plicata (0.016 per year), P. sintoxia (0.015 per year), and C. pustulosa (0.013 per year), but much lower for O. reflexa (0.008 per year). Effective management decisions for mussels requires a better understanding of how vital rates govern populations and how they vary across a suite of physical and biological factors. Information on how population vital rates vary among species and over time gives managers another tool to understand how mussels may respond to management actions such as habitat restoration projects. Given the importance of substrate stability inferred from this study, management actions that maintain or increase substrate stability are likely to result in high quality mussel assemblages and may restore a valuable component of ecosystem function in this region.

Minnesota, Wisconsin↗
USGS2008

Ground-Water Quality in Western New York, 2006

Water samples were collected from 7 production wells and 26 private residential wells in western New York from August through December 2006 and analyzed to characterize the chemical quality of ground water. Wells at 15 of the sites were screened in sand and gravel aquifers, and 18 were finished in bedrock aquifers. The wells were selected to represent areas of greatest ground-water use and to provide a geographical sampling from the 5,340-square-mile study area. Samples were analyzed for 5 physical properties and 219 constituents that included nutrients, major inorganic ions, trace elements, radionuclides, pesticides, volatile organic compounds (VOC), phenolic compounds, organic carbon, and bacteria. Results indicate that ground water used for drinking supply is generally of acceptable quality, although concentrations of some constituents or bacteria exceeded at least one drinking-water standard at 27 of the 33 wells. The cations that were detected in the highest concentrations were calcium, magnesium, and sodium; anions that were detected in the highest concentrations were bicarbonate, chloride, and sulfate. The predominant nutrients were nitrate and ammonia; nitrate concentrations were higher in samples from sand and gravel aquifers than in samples from bedrock. The trace elements barium, boron, copper, lithium, nickel, and strontium were detected in every sample; the trace elements with the highest concentrations were barium, boron, iron, lithium, manganese, and strontium. Eighteen pesticides, including 9 pesticide degradates, were detected in water from 14 of the 33 wells, but none of the concentrations exceeded State or Federal Maximum Contaminant Levels (MCLs). Fourteen volatile organic compounds were detected in water from 12 of the 33 wells, but none of the concentrations exceeded MCLs. Eight chemical analytes and three types of bacteria were detected in concentrations that exceeded Federal and State drinking-water standards, which are typically identical. Sulfate concentrations exceeded the U.S. Environmental Protection Agency (USEPA) Secondary Maximum Contaminant Level (SMCL) of 250 milligrams per liter (mg/L) in three samples, and chloride concentrations exceeded the SMCL of 250 mg/L in two samples. Sodium concentrations exceeded the USEPA Drinking Water Health Advisory of 60 mg/L in nine samples. Iron concentrations exceeded the SMCL of 300 ug/L (micrograms per liter) in 14 filtered samples, and manganese exceeded the USEPA SMCL of 50 ug/L in 15 filtered samples, as well as the New York State MCL of 300 ug/L in 1 filtered sample. Arsenic exceeded the USEPA MCL of 10 ug/L in two samples, aluminum exceeded the SMCL for aluminum of 50 ug/L in one sample, and lead exceeded the MCL of 15 ug/L in one sample. Radon-222 exceeded the proposed USEPA MCL of 300 picocuries per liter in 24 samples. Any detection of coliform bacteria indicates a violation of New York State health regulations; total coliform was detected in 12 samples, and Escherichia coli was detected in 2 samples. The plate counts for heterotrophic bacteria exceeded the MCL (500 colony-forming units per milliliter) in four samples.

Open-File Report↗
USGS2000

Regression analysis and real-time water-quality monitoring to estimate constituent concentrations, loads, and yields in the Little Arkansas River, south-central Kansas, 1995-99

Water from the Little Arkansas River is used as source water for artificial recharge to the Equus Beds aquifer, which provides water for the city of Wichita in south-central Kansas. To assess the quality of the source water, continuous in-stream water-quality monitors were installed at two U.S. Geological Survey stream-gaging stations to provide real-time measurement of specific conductance, pH, water temperature, dissolved oxygen, and turbidity in the Little Arkansas River. In addition, periodic water samples were collected manually and analyzed for selected constituents, including alkalinity, dissolved solids, total suspended solids, chloride, sulfate, atrazine, and fecal coliform bacteria. However, these periodic samples do not provide real-time data on which to base aquifer-recharge operational decisions to prevent degradation of the Equus Beds aquifer. Continuous and periodic monitoring enabled identification of seasonal trends in selected physical properties and chemical constituents and estimation of chemical mass transported in the Little Arkansas River. Identification of seasonal trends was especially important because high streamflows have a substantial effect on chemical loads and because concentration data from manually collected samples often were not available. Therefore, real-time water-quality monitoring of surrogates for the estimation of selected chemical constituents in streamflow can increase the accuracy of load and yield estimates and can decrease some manual data-collection activities. Regression equations, which were based on physical properties and analysis of water samples collected from 1995 through 1998 throughout 95 percent of the stream's flow duration, were developed to estimate alkalinity, dissolved solids, total suspended solids, chloride, sulfate, atrazine, and fecal coliform bacteria concentrations. Error was evaluated for the first year of data collection and each subsequent year, and a decrease in error was observed as the number of samples increased. Generally, 2 years of data (35 to 55 samples) collected throughout 90 to 95 percent of the stream's flow duration were sufficient to define the relation between a constituent and its surrogate(s). Relations and resulting equations were site specific. To test the regression equations developed from the first 3 years of data collection (1995-98), the equations were applied to the fourth year of data collection (1999) to calculate estimated constituent loads and the errors associated with these loads. Median relative percentage differences between measured constituent loads determined using the analysis of periodic, manual water samples and estimated constituent loads were less than 25 percent for alkalinity, dissolved solids, chloride, and sulfate. The percentage differences for total suspended solids, atrazine, and bacteria loads were more than 25 percent. Even for those constituents with large relative percentage differences between the measured and estimated loads, the estimation of constituent concentrations with regression analysis and real-time water-quality monitoring has numerous advantages over periodic manual sampling. The timely availability of bacteria and other constituent data may be important when considering recreation and the whole-body contact criteria established by the Kansas Department of Health and Environment for a specific water body. In addition, water suppliers would have timely information to use in adjusting water-treatment strategies; environmental changes could be assessed in time to prevent negative effects on fish or other aquatic life; and officials for the Equus Beds Ground-Water Recharge Demonstration project could use this information to prevent the possible degradation of the Equus Beds aquifer by choosing not to recharge when constituent concentrations in the source water are large. Constituent loads calculated from the regression equations may be useful for calculating total maximum daily loads (TMDL's), wh

Water-Resources Investigations Report↗
USGS2009

Groundwater Quality in Central New York, 2007

Water samples were collected from 7 production wells and 28 private residential wells in central New York from August through December 2007 and analyzed to characterize the chemical quality of groundwater. Seventeen wells are screened in sand and gravel aquifers, and 18 are finished in bedrock aquifers. The wells were selected to represent areas of greatest groundwater use and to provide a geographical sampling from the 5,799-square-mile study area. Samples were analyzed for 6 physical properties and 216 constituents, including nutrients, major inorganic ions, trace elements, radionuclides, pesticides, volatile organic compounds, phenolic compounds, organic carbon, and 4 types of bacteria. Results indicate that groundwater used for drinking supply is generally of acceptable quality, although concentrations of some constituents or bacteria exceeded at least one drinking-water standard at several wells. The cations detected in the highest concentrations were calcium, magnesium, and sodium; anions detected in the highest concentrations were bicarbonate, chloride, and sulfate. The predominant nutrients were nitrate and ammonia, but no nutrients exceeded Maximum Contaminant Levels (MCLs). The trace elements barium, boron, lithium, and strontium were detected in every sample; the trace elements present in the highest concentrations were barium, boron, iron, lithium, manganese, and strontium. Fifteen pesticides, including seven pesticide degradates, were detected in water from 17 of the 35 wells, but none of the concentrations exceeded State or Federal MCLs. Sixteen volatile organic compounds were detected in water from 15 of the 35 wells. Nine analytes and three types of bacteria were detected in concentrations that exceeded Federal and State drinking-water standards, which typically are identical. One sample had a water color that exceeded the U.S. Environmental Protection Agency (USEPA) Secondary Maximum Contaminant Level (SMCL) and the New York State MCL of 10 color units. Sulfate concentrations exceeded the USEPA SMCL and the New York State MCL of 250 milligrams per liter (mg/L) in two samples, and chloride concentrations exceeded the USEPA SMCL and the New York State MCL of 250 mg/L in two samples. Sodium concentrations exceeded the USEPA Drinking Water Health Advisory of 60 mg/L in eight samples. Iron concentrations exceeded the USEPA SMCL and the New York State MCL of 300 micrograms per liter (ug/L) in 10 filtered samples. Manganese exceeded the USEPA SMCL of 50 ug/L in 10 filtered samples and the New York State MCL of 300 ug/L in 1 filtered sample. Barium exceeded the MCL of 2,000 ug/L in one sample, and aluminum exceeded the SMCL of 50 ug/L in three samples. Radon-222 exceeded the proposed USEPA MCL of 300 picocuries per liter in 12 samples. One sample from a private residential well had a trichloroethene concentration of 50.8 ug/L, which exceeded the MCL of 5 ug/L. Any detection of coliform bacteria indicates a potential violation of New York State health regulations; total coliform bacteria were detected in 19 samples, and fecal coliform bacteria were detected in one sample. The plate counts for heterotrophic bacteria exceeded the MCL (500 colony-forming units per milliliter) in three samples.

Open-File Report↗
USGS2001

Macroinvertebrate instream flow studies after 20 years: A role in stream management and restoration

Over the past two decades of refinement and application of instream flow evaluations, we have examined the hydraulic habitat of aquatic macroinvertebrates in a variety of conditions, along with the role of these macroinvertebrates in sustaining ecosystem integrity. Instream flow analyses assume that predictable changes in channel flow characteristics can, in turn, be used to predict the change in the density or distribution of lotic species or, more appropriately, the availability of useable habitat for those species. Five major hydraulic conditions most affect the distribution and ecological success of lotic biota: suspended load, bedload movement, and water column effects, such as turbulence, velocity profile, and substratum interactions (near-bed hydraulics). The interactions of these hydraulic conditions upon the morphology and behavior of the individual organisms govern the distribution of aquatic biota. Historically, management decisions employing the Physical Habitat Simulation (PHABSIM) have focused upon prediction of available habitat for life stages of target fish species. Regulatory agencies have rarely included evaluation of benthos for flow reservations. Although ‘taxonomic discomfort’ may be cited for the reluctant use or creation of benthic criteria, we suggest that a basic misunderstanding of the links between benthic macroinvertebrate and the fish communities is still a problem. This is derived from the lack of a perceived ‘value’ that can be assigned to macroinvertebrate species. With the exception of endangered mussel species (for which PHABSIM analysis is probably inappropriate), this is understandable. However, it appears that there is a greater ability to predict macroinvertebrate distribution (that is, a response to the change in habitat quality or location) and diversity without complex population models. Also, habitat suitability criteria for water quality indicator taxa (Ephemeroptera, Plecoptera, and Trichoptera; the so-called ‘EPTs’) may also provide additional management options to stream regulators. The greatest application for macroinvertebrate criteria will be in low-order streams where a more immediate link to fish communities can be established. We present an example from Queens Creek, in North Carolina, USA, in which monthly allocations required to preserve the integrity of the benthic macroinvertebrate community were significantly higher than for the target benthic fish species, Cottus bairdi . In the months when both Cottus and community diversity of macroinvertebrates were the ‘bottleneck’ life stages, preservation of only fish species could result in an additional 5–25% loss in macroinvertebrate habitat. We suggest that, as there becomes an increased emphasis on maintaining macroinvertebrates as monitors of stream health, there will be a concurrent emphasis on incorporating hydraulic habitat conditions as a part of bioassessment.

Regulated Rivers: Research & Management↗
USGS1998

Isolation of Acholeplasma laidlawii from centrarchids in a Central Florida Lake

In 1991, the poor physical condition of largemouth bass Micropterus salmoides from Lake Harris, Florida, was associated with the decline of the lake's fishery. The swim bladders of emaciated bass had mild inflammation and ecchymotic hemorrhages. A mycoplasma-like organism isolated from swim bladders was initially believed to be the causative agent. The organism was later identified as Acholeplasma laidlawii by using a fluorescent antibody procedure and was demonstrated to be nonpathogenic. Parenteral injection of the organism into healthy largemouth bass fingerlings produced no signs of disease or difference in growth rate compared with control fish during a 16-month period. Field studies resulted in isolation of A. laidlawii from black crappies Pomoxis nigromaculatus , bluegills Lepomis macrochirus , and redear sunfish L. microlophus , but not from noncentrarchids in Lake Harris or from any fish species in a control fishery (Lake Holly, Florida). The absence of organisms in all emaciated bass, our inability to reproduce the disease, and isolation of the organism from seemingly healthy fish suggest this organism was not pathogenic.

Journal of Aquatic Animal Health↗
USGS2019

An integrative GIS approach to analyzing the impacts of septic systems on the coast of Florida, USA

An estimated 2.7 million septic systems in Florida, USA are potential ground and surface water contaminant sources that may affect environmental and human health. This study examined the spatial distribution of septic systems, coastal surface water contamination, and related environmental factors of coastal Florida watersheds at the 8-digit hydrologic unit code level. Hydrology, in situ sampling data, and other ancillary data were combined in a geographic information system to examine spatial relationships. Spatial distribution data were correlated to nitrogen, Enterococci counts, and beach closures tabulated since 2000, 2007, and 2012. Significant positive correlations (α = 0.05) with nitrogen and Enterococci counts were consistent for percent agricultural cover, percent combined urban and agricultural cover, septic tank density, population density, and septic tank density in poorly drained soils. Beach closures since 2012 were significantly positively correlated (α = 0.05) to average impervious cover (IC) and percent urbanization. Statistics indicated that Enterococci counts, nitrogen, and beach closures may be related to specific environmental factors and septic tank densities. The combination of septic tanks in urban regions with high IC prone to elevated runoff could also be a factor in surface water contamination. Data availability was also highlighted as a limitation due to infrequent spatial and temporal sampling.

Florida↗
USGS2026

Investigation of drivers and sources of potential harmful algal blooms in Lake Anna, Virginia, 2023-24

Algal blooms in freshwater reservoirs are an increasing concern because of the risk to aquatic ecosystem health, recreational use, and water quality. Among the taxa that comprise an algal bloom, cyanobacteria are of particular concern due to the potential to produce toxic compounds which can cause acute and chronic illness in humans if ingested through contaminated water or shellfish. When toxins are above a toxin-specific threshold in the water column, the Commonwealth of Virginia categorizes the bloom as a harmful algal bloom (HAB), distinguishing it from an algal bloom without toxins present. Toxins are of particular concern in bodies of water which serve as major recreational areas, such as Lake Anna in central Virginia. Lake Anna is a 27 km-long and 47 km2 reservoir in central Virginia. Since the Commonwealth of Virginia revised the HAB monitoring framework in 2018, algal bloom advisories for potentially toxigenic blooms have been issued in the western, riverine zone of the reservoir. There were detections of microcystin and anatoxin production but no detections of cylindrospermopsin and saxitoxin production in Lake Anna; however, toxin concentrations were low, at values less than 0.65 µg/L. In 2023, the U.S. Geological Survey, in cooperation with Virginia Department of Environmental Quality, initiated a 19-month intensive and extensive study of western Lake Anna and its tributaries (North Anna River and Pamunkey Creek) to (1) characterize the algal community, biomass, and toxin production; (2) identify potential drivers leading to algal bloom initiation, persistence, and decline; and (3) assess the primary sources of the drivers contributing to algal blooms. Continuous and discrete monitoring of water quality within the lake, watershed inputs, meteorological conditions, and algal communities were monitored. Multiple modeling scenarios identified that the formation and persistence of algal blooms in Lake Anna are driven by interactions among chemical, macro- and micronutrient, and physical factors. Key drivers include total nitrogen, total phosphorus, water temperature, suspended sediment concentration, wind speed, copper, iron, molybdenum, nickel, sodium, and alkalinity. During this study, winter stormflow events delivered the highest loading of macro- and micronutrients from the tributaries to the lake. The lake is a sink for these nutrients in the water column or in the lake-bed sediments. During high-occupancy and recreation periods on the lake in the summer months, boating activity can promote internal loading by the resuspension of the lake-bed sediments, thereby increasing the nutrient availability for algal uptake. Thermal stratification and hypoxic conditions were observed, which can contribute to the passive release of nutrients into the water column, further facilitating algal bloom proliferation. These processes may create a positive feedback loop that supports the formation, persistence, and annual recurrence of algal blooms in the western region of Lake Anna. Continued water-quality monitoring of early warning indicators may improve the detection and forecasting of algal growth in the lake and help managers proactively manage water quality and algal growth.

EarthArXiv↗
USGS1993

The Pajarito Plateau: A bibliography

This bibliography is the result of two initially independent projects. As the consulting archaeologist at Los Alamos National Laboratory (LANL), Charlie R. Steen collected entries at the suggestion of the staff of the Environmental Surveillance Group of the Health, Safety, and Environmental Division, HSE-8. The primary purpose was to aid the staff in evaluating cultural resources on LANL lands. In addition to works that related to the archaeology and history of the area, Steen included notations of a few books and articles in other fields such as geology and natural history. It was hoped that they also would be of value to other organizations and to students of past human activities on the Pajarito Plateau. At the same time, the National Park Service (NPS) was planning a major survey of Bandelier National Monument (BNM). As part of this plan, the author was asked to prepare a background document that described research previously carried out in the area, including an annotated bibliography. Although the survey would be limited to the park boundaries, the larger Pajarito Plateau is a more logical study area from physiographic, environmental, and cultural perspectives; hence the focus was on this larger region. Mathien (1986) also included some references to natural resources studies, particularly those initiated by NPS within Bandelier National Monument. Both bibliographies were made available to Colleen Olinger and Beverly Larson of the Health and Environmental Services Group at Los Alamos. They realized that while neither was complete, each included entries missing from the other. Larson suggested the two bibliographies be combined. (At this time, Craig Allen was studying the landscape of the Jemez Mountains [Allen 1984c, 1989]. His investigations included much detailed information on natural resource studies and were added in 1991 and 1992.) To limit the scope of their work, Steen and Mathien had chosen their parameter: the Pajarito Plateau. Geographically, the Pajarito Plateau is described as the high tableland that lies between the Jemez Mountains on the west and the Rio Grande on the east. From north to south, it extends from the Chama Valley to La Cañada de Cochiti (Hewett 1906:14)(Figure 1). Because human activity rarely stops at such definite boundaries, major ethnographic studies of Tewa (San Ildefonso and Santa Clara) and Keres (Cochiti) linguistic groups are included. (Even though most of the historic pueblos occupied by the Tewa and Keres are not located on the Pajarito Plateau, oral traditions and archaeological data suggest that these groups once occupied sites on the plateau.) Towa studies are not included because Steen believed Towa ancestors were not involved in major cultural developments of the Pajarito Plateau. In addition, a bibliography of the Jemez area (home of Towa people) has been prepared by Michael Elliott (1982) and included with his nomination of large Pueblo sites near Jemez Springs to the National Register of Historic Places that is on file at the Museum of New Mexico, Laboratory of Anthropology, in Santa Fe. Both Steen and Mathien included references to geographically and historically related material that does not focus on the Pajarito Plateau but, nonetheless, is important to understanding the area's archaeology and physical environment, for example, lithic resources available from Cerro Pedernal or in the Sangre de Cristo Mountains.

New Mexico↗
USGS2011

Pharmaceutical compounds in Merrimack River water used for public supply, Lowell, Massachusetts, 2008-09

This report presents results of a study conducted by the U.S. Geological Survey (USGS), in cooperation with the Massachusetts Department of Environmental Protection, to determine the occurrence of 14 commonly used human-health pharmaceutical compounds and fecal-indicator bacteria in Merrimack River water used as a drinking-water source by 135,000 residents in eastern Massachusetts. The study was designed to complement the USGS National Water-Quality Assessment Program's Source Water-Quality Assessment, which identifies patterns of occurrence of 280 primarily unregulated organic wastewater contaminants in source water used by community water systems and determines whether these patterns also occur in treated drinking water prior to distribution. The study involved periodic collection and analysis of raw Merrimack River water and treated drinking water over the course of 1 year. Water samples were collected periodically without regard to flow regime or antecedent weather conditions at the Lowell Regional Water Utility's Merrimack River intake upstream from Lowell, Mass. The same parcel of water was then sampled as finished water following treatment. Despite the presence of many potential sources of contamination in the drinking-water source area, only 2 of the 14 pharmaceutical analytes were detected at reportable concentrations in the source-water samples, and these occurred in only one set of periodic samples. Acetaminophen, a nonprescription analgesic, and caffeine were detected in the September source-water samples at concentrations of 0.084 and 0.068 micrograms per liter, respectively. Three other compounds-carbamazepine, an antiepileptic; cotinine, a metabolite of nicotine; and diphenhydramine, a nonprescription antihistamine-were detected in source-water samples, but at concentrations too low to be reliably quantified. None of the 14 pharmaceuticals was found in the finished water at a reportable concentration, defined as two times the long-term detection limit used by the analytical laboratory. In addition to the pharmaceutical analyses, measurements of fecal-indicator bacteria (Escherichia coli) concentrations and several physical characteristics were made on all source-water samples. Values for these constituents were consistently within State standards. It is possible that the monthly sampling schedule missed hydrologic events that would have transported greater concentrations of sewage contaminants to the sampling site, or that the large flow volume of the river at the study site effectively diluted the contaminant signal, but it is also likely that recent efforts to separate stormwater- and wastewater-discharge systems in the reaches upstream from the Lowell Regional Water Utility have greatly reduced the potential for sewage contamination at the intake.

Scientific Investigations Report↗
USGS2011

Hydrogeologic setting and simulation of groundwater flow near the Canterbury and Leadville Mine Drainage Tunnels, Leadville, Colorado

The Leadville mining district is historically one of the most heavily mined regions in the world producing large quantities of gold, silver, lead, zinc, copper, and manganese since the 1860s. A multidisciplinary investigation was conducted by the U.S. Geological Survey, in cooperation with the Colorado Department of Public Health and Environment, to characterize large-scale groundwater flow in a 13 square-kilometer region encompassing the Canterbury Tunnel and the Leadville Mine Drainage Tunnel near Leadville, Colorado. The primary objective of the investigation was to evaluate whether a substantial hydraulic connection is present between the Canterbury Tunnel and Leadville Mine Drainage Tunnel for current (2008) hydrologic conditions. Altitude in the Leadville area ranges from about 3,018 m (9,900 ft) along the Arkansas River valley to about 4,270 m (14,000 ft) along the Continental Divide east of Leadville, and the high altitude of the area results in a moderate subpolar climate. Winter precipitation as snow was about three times greater than summer precipitation as rain, and in general, both winter and summer precipitation were greatest at higher altitudes. Winter and summer precipitation have increased since 2002 coinciding with the observed water-level rise near the Leadville Mine Drainage Tunnel that began in 2003. The weather patterns and hydrology exhibit strong seasonality with an annual cycle of cold winters with large snowfall, followed by spring snowmelt, runoff, and recharge (high-flow) conditions, and then base-flow (low-flow) conditions in the fall prior to the next winter. Groundwater occurs in the Paleozoic and Precambrian fractured-rock aquifers and in a Quaternary alluvial aquifer along the East Fork Arkansas River, and groundwater levels also exhibit seasonal, although delayed, patterns in response to the annual hydrologic cycle. A three-dimensional digital representation of the extensively faulted bedrock was developed and a geophysical direct-current resistivity field survey was performed to evaluate the geologic structure of the study area. The results show that the Canterbury Tunnel is located in a downthrown structural block that is not in direct physical connection with the Leadville Mine Drainage Tunnel. The presence of this structural discontinuity implies there is no direct groundwater pathway between the tunnels along a laterally continuous bedrock unit. Water-quality results for pH and major-ion concentrations near the Canterbury Tunnel showed that acid mine drainage has not affected groundwater quality. Stable-isotope ratios of hydrogen and oxygen in water indicate that snowmelt is the primary source of groundwater recharge. On the basis of chlorofluorocarbon and tritium concentrations and mixing ratios for groundwater samples, young groundwater (groundwater recharged after 1953) was indicated at well locations upgradient from and in a fault block separate from the Canterbury Tunnel. Samples from sites downgradient from the Canterbury Tunnel were mixtures of young and old (pre-1953) groundwater and likely represent snowmelt recharge mixed with older regional groundwater that discharges from the bedrock units to the Arkansas River valley. Discharge from the Canterbury Tunnel contained the greatest percentage of old (pre-1953) groundwater with a mixture of about 25 percent young water and about 75 percent old water. A calibrated three-dimensional groundwater model representing high-flow conditions was used to evaluate large-scale flow characteristics of the groundwater and to assess whether a substantial hydraulic connection was present between the Canterbury Tunnel and Leadville Mine Drainage Tunnel. As simulated, the faults restrict local flow in many areas, but the fracture-damage zones adjacent to the faults allow groundwater to move along faults. Water-budget results indicate that groundwater flow across the lateral edges of the model controlled the majority of flow in and out of the aquifer (79 percent and 63 percent of the total water budget, respectively). The largest contributions to the water budget were groundwater entering from the upper reaches of the watershed and the hydrologic interaction of the groundwater with the East Fork Arkansas River. Potentiometric surface maps of the simulated model results were generated for depths of 50, 100, and 250 m. The surfaces revealed a positive trend in hydraulic head with land-surface altitude and evidence of increased control on fluid movement by the fault network structure at progressively greater depths in the aquifer. Results of advective particle-tracking simulations indicate that the sets of simulated flow paths for the Canterbury Tunnel and the Leadville Mine Drainage Tunnel were mutually exclusive of one another, which also suggested that no major hydraulic connection was present between the tunnels. Particle-tracking simulations also revealed that although the fault network generally restricted groundwater movement locally, hydrologic conditions were such that groundwater did cross the fault network at many locations. This cross-fault movement indicates that the fault network controls regional groundwater flow to some degree but is not a complete barrier to flow. The cumulative distributions of adjusted age results for the watershed indicate that approximately 30 percent of the flow pathways transmit groundwater that was younger than 68 years old (post-1941) and that about 70 percent of the flow pathways transmit old groundwater. The particle-tracking results are consistent with the apparent ages and mixing ratios developed from the chlorofluorocarbon and tritium results. The model simulations also indicate that approximately 50 percent of the groundwater flowing through the study area was less than 200 years old and about 50 percent of the groundwater flowing through the study area is old water stored in low-permeability geologic units and fault blocks. As a final examination of model response, the conductance parameters of the Canterbury Tunnel and Leadville Mine Drainage Tunnel were manually adjusted from the calibrated values to determine if altering the flow discharge in one tunnel affects the hydraulic behavior in the other tunnel. The examination showed no substantial hydraulic connection. The multidisciplinary investigation yielded an improved understanding of groundwater characteristics near the Canterbury Tunnel and the Leadville Mine Drainage Tunnel. Movement of groundwater between the Canterbury Tunnel and Leadville Mine Drainage Tunnel that was central to this investigation could not be evaluated with strong certainty owing to the structural complexity of the region, study simplifications, and the absence of observation data within the upper sections of the Canterbury Tunnel and between the Canterbury Tunnel and the Leadville Mine Drainage Tunnel. There was, however, collaborative agreement between all of the analyses performed during this investigation that a substantial hydraulic connection did not exist between the Canterbury Tunnel and the Leadville Mine Drainage Tunnel under natural flow conditions near the time of this investigation.

Colorado↗
USGS2012

Prioritizing pesticide compounds for analytical methods development

The U.S. Geological Survey (USGS) has a periodic need to re-evaluate pesticide compounds in terms of priorities for inclusion in monitoring and studies and, thus, must also assess the current analytical capabilities for pesticide detection. To meet this need, a strategy has been developed to prioritize pesticides and degradates for analytical methods development. Screening procedures were developed to separately prioritize pesticide compounds in water and sediment. The procedures evaluate pesticide compounds in existing USGS analytical methods for water and sediment and compounds for which recent agricultural-use information was available. Measured occurrence (detection frequency and concentrations) in water and sediment, predicted concentrations in water and predicted likelihood of occurrence in sediment, potential toxicity to aquatic life or humans, and priorities of other agencies or organizations, regulatory or otherwise, were considered. Several existing strategies for prioritizing chemicals for various purposes were reviewed, including those that identify and prioritize persistent, bioaccumulative, and toxic compounds, and those that determine candidates for future regulation of drinking-water contaminants. The systematic procedures developed and used in this study rely on concepts common to many previously established strategies. The evaluation of pesticide compounds resulted in the classification of compounds into three groups: Tier 1 for high priority compounds, Tier 2 for moderate priority compounds, and Tier 3 for low priority compounds. For water, a total of 247 pesticide compounds were classified as Tier 1 and, thus, are high priority for inclusion in analytical methods for monitoring and studies. Of these, about three-quarters are included in some USGS analytical method; however, many of these compounds are included on research methods that are expensive and for which there are few data on environmental samples. The remaining quarter of Tier 1 compounds are high priority as new analytes. The objective for analytical methods development is to design an integrated analytical strategy that includes as many of the Tier 1 pesticide compounds as possible in a relatively few, cost-effective methods. More than 60 percent of the Tier 1 compounds are high priority because they are anticipated to be present at concentrations approaching levels that could be of concern to human health or aquatic life in surface water or groundwater. An additional 17 percent of Tier 1 compounds were frequently detected in monitoring studies, but either were not measured at levels potentially relevant to humans or aquatic organisms, or do not have benchmarks available with which to compare concentrations. The remaining 21 percent are pesticide degradates that were included because their parent pesticides were in Tier 1. Tier 1 pesticide compounds for water span all major pesticide use groups and a diverse range of chemical classes, with herbicides and their degradates composing half of compounds. Many of the high priority pesticide compounds also are in several national regulatory programs for water, including those that are regulated in drinking water by the U.S. Environmental Protection Agency under the Safe Drinking Water Act and those that are on the latest Contaminant Candidate List. For sediment, a total of 175 pesticide compounds were classified as Tier 1 and, thus, are high priority for inclusion in analytical methods available for monitoring and studies. More than 60 percent of these compounds are included in some USGS analytical method; however, some are spread across several research methods that are expensive to perform, and monitoring data are not extensive for many compounds. The remaining Tier 1 compounds for sediment are high priority as new analytes. The objective for analytical methods development for sediment is to enhance an existing analytical method that currently includes nearly half of the pesticide compounds in Tier 1 by adding as many additional Tier 1 compounds as are analytically compatible. About 35 percent of the Tier 1 compounds for sediment are high priority on the basis of measured occurrence. A total of 74 compounds, or 42 percent, are high priority on the basis of predicted likelihood of occurrence according to physical-chemical properties, and either have potential toxicity to aquatic life, high pesticide useage, or both. The remaining 22 percent of Tier 1 pesticide compounds were either degradates of Tier 1 parent compounds or included for other reasons. As with water, the Tier 1 pesticide compounds for sediment are distributed across the major pesticide-use groups; insecticides and their degradates are the largest fraction, making up 45 percent of Tier 1. In contrast to water, organochlorines, at 17 percent, are the largest chemical class for Tier 1 in sediment, which is to be expected because there is continued widespread detection in sediments of persistent organochlorine pesticides and their degradates at concentrations high enough for potential effects on aquatic life. Compared to water, there are fewer available benchmarks with which to compare contaminant concentrations in sediment, but a total of 19 Tier 1 compounds have at least one sediment benchmark or screening value for aquatic organisms. Of the 175 compounds in Tier 1, 77 percent have high aquatic-life toxicity, as defined for this process. This evaluation of pesticides and degradates resulted in two lists of compounds that are priorities for USGS analytical methods development, one for water and one for sediment. These lists will be used as the basis for redesigning and enhancing USGS analytical capabilities for pesticides in order to capture as many high-priority pesticide compounds as possible using an economically feasible approach.

Scientific Investigations Report↗
USGS1992

Ground-water-quality assessment of the central Oklahoma aquifer, Oklahoma: Hydrologic, water-quality, and quality-assurance data 1987-90

This report presents data collected from 202 wells between June 1987 and September 1990 as part of the Central Oklahoma aquifer pilot study of the National Water-Quality Assessment Program. The report describes the sampling networks, the sampling procedures, and the results of the ground-water quality and quality-assurance sample analyses. The data tables consist of information about the wells sampled and the results of the chemical analyses of ground water and quality-assurance sampling. Chemical analyses of ground-water samples in four sampling networks are presented: A geochemical network, a low-density survey bedrock network, a low-density survey alluvium and terrace deposits network, and a targeted urban network. The analyses generally included physical properties, major ions, nutrients, trace substances, radionuclides, and organic constituents. The chemical analyses of the ground-water samples are presented in five tables: (1) Physical properties and concentrations of major ions, nutrients, and trace substances; (2) concentrations of radionuclides and radioactivities; (3) carbon isotope ratios and delta values (d-values) of selected isotopes; (4) concentrations of organic constituents; and (5) organic constituents not reported in ground-water samples. The quality of the ground water sampled varied substantially. The sum of constituents (dissolved solids) concentrations ranged from 71 to 5,610 milligrams per liter, with 38 percent of the wells sampled exceeding the Secondary Maximum Contaminant Level of 500 milligrams per liter established under the Safe Drinking Water Act. Values of pH ranged from 5.7 to 9.2 units with 20 percent of the wells outside the Secondary Maximum Contaminant Level of 6.5 to 8.5 units. Nitrite plus nitrate concentrations ranged from less than 0.1 to 85 milligrams per liter with 8 percent of the wells exceeding the proposed Maximum Contaminant Level of 10 milligrams per liter. Concentrations of trace substances were highly variable, ranging from below the reporting level to concentrations over the Maximum Contaminant Levels for several constituents (arsenic, barium, cadmium, chromium, lead, and selenium). Radionuclide activities also were highly variable. Gross alpha radioactivity ranged from 0.1 to 210 picocuries per liter as 230thorium. Of the wells sampled, 20 percent exceeded the proposed Maximum Contaminant Level of 15 picocuries per liter for gross alpha radioactivity. Organic constituents were detected in 39 percent of the 170 wells sampled for organic constituents; in most cases concentrations were at or near the laboratory minimum reporting levels. Ten of the wells sampled for organic constituents had one or more constituents (chlordane, dieldrin, heptachlor epoxide, trichloroethylene, 1,1-dichloroethylene, 1,1,1-trichloroethane) at concentrations equal to or greater than the Maximum Contaminant Level or acceptable concentrations as suggested in the Environmental Protection Agency's Health Advisory Summaries. Quality-assurance sampling included duplicate samples, repeated samples, blanks, spikes, and blind samples. These samples proved to be essential in evaluating the accuracy of the data, particularly in the case of volatile organic constituents.

Oklahoma↗
USGS1999

Pesticides in streams in New Jersey and Long Island, New York, and relation to land use

Pesticide compounds were detected in all 50 water samples collected from streams in New Jersey and Long Island, New York, during June 9-18, 1997. Samples were analyzed for 47 compounds, of which 25 were detected. The number of pesticides detected at each site ranged from 1 to 14. The seven most frequently detected pesticides were atrazine (in 93 percent of samples), metolachlor (86 percent), prometon (84 percent), desethyl-atrazine (78 percent), simazine (78 percent), carbaryl (44 percent), and diazinon (44 percent). All pesticide concentrations were within both U.S. Environmental Protection Agency (USEPA) and State maximum contaminant levels (MCL?s) for drinking water and USEPA lifetime health advisory levels (HAL?s). Concentrations of dieldrin and methylazinphos at one or more sites, however, equaled or exceeded a Federal or State water-quality criterion for aquatic life. The pesticides detected in a stream were related to the land-use composition of the basin. Detection frequencies of 14 of the 25 pesticides detected were highest at agricultural sites; acetochlor, azinphos-methyl, carbofuran, and pebulate were detected only at agricultural sites. Seven compounds were detected most frequently at urban sites; trifluralin, dieldrin, napropamide, and benfluralin were detected only at urban sites. Four compounds were detected most frequently at sites draining areas of mixed land use. No pesticides were detected most frequently at sites draining forested areas. The median concentration and the detection frequency of a given pesticide always were highest in samples from sites in the same land-use category.The median concentrations of seven pesticides at the agricultural sites were at least twice as high as the median concentrations at sites in other land-use categories. The median concentrations of the seven compounds detected most frequently at urban sites were equal to or only slightly higher than the median concentrations at sites in other land-use categories. The median total-pesticide concentration was highest at agricultural sites (0.2 mg/L (micrograms per liter)) and lowest at forested sites (0.025 mg/L). Total-pesticide concentrations varied most at agricultural sites and least at forested sites. Total-pesticide concentration and number of pesticides detected at a site increased as the percentage of agricultural land in the basin increased and decreased as the percentage of undeveloped land increased. Only three of the seven most frequently detected compounds?atrazine, metolachlor, and carbaryl?are among the seven most heavily applied pesticides in New Jersey. This is because detection frequencies are the result of physical and chemical properties of the pesticide compounds as well as application rates. Water solubility and soil-adsorption coefficients appear to be the two physical properties of pesticides that most influence their presence in streams.

New Jersey, New York↗
USGS2019

Epidemic growth rates and host movement patterns shape management performance for pathogen spillover at the wildlife-livestock interface

Managing pathogen spillover at the wildlife–livestock interface is a key step towards improving global animal health, food security and wildlife conservation. However, predicting the effectiveness of management actions across host–pathogen systems with different life histories is an on-going challenge since data on intervention effectiveness are expensive to collect and results are system-specific. We developed a simulation model to explore how the efficacies of different management strategies vary according to host movement patterns and epidemic growth rates. The model suggested that fast-growing, fast-moving epidemics like avian influenza were best-managed with actions like biosecurity or containment, which limited and localized overall spillover risk. For fast-growing, slower-moving diseases like foot-and-mouth disease, depopulation or prophylactic vaccination were competitive management options. Many actions performed competitively when epidemics grew slowly and host movements were limited, and how management efficacy related to epidemic growth rate or host movement propensity depended on what objective was used to evaluate management performance. This framework offers one means of classifying and prioritizing responses to novel pathogen spillover threats, and evaluating current management actions for pathogens emerging at the wildlife–livestock interface.

Philosophical Transactions of the Royal Society A:↗
USGS2019

The landscape of soil carbon data: Emerging questions, synergies and databases

Soil carbon has been measured for over a century in applications ranging from understanding biogeochemical processes in natural ecosystems to quantifying the productivity and health of managed systems. Consolidating diverse soil carbon datasets is increasingly important to maximize their value, particularly with growing anthropogenic and climate change pressures. In this progress report, we describe recent advances in soil carbon data led by the International Soil Carbon Network and other networks. We highlight priority areas of research requiring soil carbon data, including (a) quantifying boreal, arctic and wetland carbon stocks, (b) understanding the timescales of soil carbon persistence using radiocarbon and chronosequence studies, (c) synthesizing long-term and experimental data to inform carbon stock vulnerability to global change, (d) quantifying root influences on soil carbon and (e) identifying gaps in model–data integration. We also describe the landscape of soil datasets currently available, highlighting their strengths, weaknesses and synergies. Now more than ever, integrated soil data are needed to inform climate mitigation, land management and agricultural practices. This report will aid new data users in navigating various soil databases and encourage scientists to make their measurements publicly available and to join forces to find soil-related solutions.

Progress in Physical Geography: Earth and Environm↗
USGS2002

Induction of skin ulcers in Atlantic menhaden by injection and aqueous exposure to the zoospores of Aphanomyces invadans

The infectivity and role of Aphanomyces invadans in the etiology of skin ulcers in Atlantic menhaden Brevoortia tyrannus were investigated with two laboratory challenges. In the first experiment, Atlantic menhaden received subcutaneous injections with secondary zoospores from one of three cultures of Aphanomyces : WIC (an endemic isolate of A. invadans in Atlantic menhaden from the Wicomico River, Maryland), PA7 (an isolate of A. invadans from striped snakehead Channa striata (also known as chevron snakehead), infected with epizootic ulcerative syndrome from Thailand), and ATCC-62427 (an isolate from Atlantic menhaden from North Carolina). Fish were injected with 1.9 × 10 2 (WIC-low), 1.9 × 10 3 (WIC-high), 5.2 × 10 2 (PA7), or 6.0 × 10 2 (ATCC-62427) zoospores and held in static water at 23.5°C (6‰ salinity) for 21 d. Both low and high doses of WIC caused incipient, granulomatous lesions after 5 d. Fish injected with the high-dose WIC died within 7 d. All fish injected with the low-dose WIC were dead after 10 d. Fish injected with zoospores of PA7 developed lesions after 9 d. Fish injected with the ATCC-62427 isolate or those that received subcutaneous injections of sterile water (controls) did not develop lesions. In the second experiment, fish were bath-exposed with zoospores of the WIC isolate after various trauma-inducing treatments. These treatments consisted of handling fish with a net (net stress, exposed for 2 h to either 70 or 700 zoospores/mL), physically removing a few scales (trauma, exposed for 1 h to 700 zoospores/mL), or acclimating fish with less handling (acclimated, untraumatized, exposed for 5.5 h to 110 zoospores/mL). Unexposed fish served as controls. Mortality ranged from 94% to 100% for net-handled and traumatized fish, with the prevalence of ulcerous lesions ranging from 70% to 79% in net-handled fish. However, mortality was 24% for the “untraumatized” fish and the prevalence of lesions was 32%. Fish injected with or exposed to bath challenges of zoospores developed lesions that were grossly and histologically identical to those observed in naturally infected Atlantic menhaden from several estuaries and rivers along the mid-Atlantic coast of the USA. The deeply penetrating ulcers were characterized by dermatitis, myofibrillar degeneration, and deep, necrotizing granulomatous myositis. Experimentally induced lesions, however, exhibited invasiveness, often involving the kidney. Injected or bath-exposed fish developed incipient granulomas after 5 d, which progressed to overt lesions over 7–9 d. We have here demonstrated that ulcerative skin lesions can be experimentally induced in Atlantic menhaden after exposure to oomycete zoospores of an endemic strain of A. invadans .

Journal of Aquatic Animal Health↗
USGS2007

Water quality on the Prairie Band Potawatomi Reservation, northeastern Kansas, June 1996 through August 2006

This report describes surface- and ground-water-quality data collected on the Prairie Band Potawatomi Reservation in northeastern Kansas from November 2003 through August 2006 (hereinafter referred to as the "current study period"). Data from this study period are compared to results from June 1996 through August 2003, which are published in previous reports as part of a multiyear cooperative study with the Prairie Band Potawatomi Nation. Surface and ground water are valuable resources to the Prairie Band Potawatomi Nation as tribal members currently (2007) use area streams to fulfill subsistence hunting and fishing needs and because ground water potentially could support expanding commercial enterprise and development. Surface-water-quality samples collected from November 2003 through August 2006 were analyzed for physical properties, dissolved solids, major ions, nutrients, trace elements, pesticides, fecal-indicator bacteria, suspended-sediment concentration, and total suspended solids. Ground-water samples were analyzed for physical properties, dissolved solids, major ions, nutrients, trace elements, pesticides, and fecal-indicator bacteria. Chemical oxygen demand and volatile organic compounds were analyzed in all three samples from one monitoring well located near a construction and demolition landfill on the reservation, and in one sample from another well in the Soldier Creek drainage basin. Previous reports published as a part of this ongoing study identified total phosphorus, triazine herbicides, and fecal coliform bacteria as exceeding their respective water-quality criteria in surface water on the reservation. Previous ground-water assessments identified occasional sample concentrations of dissolved solids, sodium, sulfate, boron, iron, and manganese as exceeding their respective water-quality criteria. Fifty-six percent of the 55 surface-water samples collected during the current study period and analyzed for total phosphorus exceeded the goal of 0.1 mg/L (milligram per liter) established by the U.S. Environmental Protection Agency (USEPA) to limit cultural eutrophication in flowing water. Concentrations of dissolved solids frequently exceeded the USEPA Secondary Drinking-Water Regulation (SDWR) of 500 mg/L in samples from two sites. Concentrations of sodium exceeded the Drinking-Water Advisory of 20 mg/L set by USEPA in almost 50 percent of the surface-water samples. All four samples analyzed for atrazine concentrations showed some concentration of the pesticide, but none exceeded the Maximum Contaminant Level (MCL) established for drinking water by USEPA of 3.0 µg/L (micrograms per liter) as an annual average. A triazine herbicide screen was used on 55 surface-water samples, and triazine compounds were frequently detected. Triazine herbicides and their degradates are listed on the USEPA Contaminant Candidate List. In 41 percent of surface-water samples, densities of Escherichia coli ( E. coli ) bacteria exceeded the primary contact, single-sample maximum in public-access bodies of water (1,198 colonies per 100 milliliters of water for samples collected between April 1 and October 31) set by the Kansas Department of Health and Environment (KDHE). Nitrite plus nitrate concentrations in all three water samples from 1 of 10 monitoring wells exceeded the MCL of 10 mg/L established by USEPA for drinking water. Arsenic concentrations in all three samples from one well exceeded the proposed MCL of 10 µg/L established by USEPA for drinking water. Boron also exceeded the drinking-water advisory in three samples from one well, and iron concentrations were higher than the SDWR in water from four wells. There was some detection of pesticides in ground-water samples from three of the wells, and one detection of the volatile organic compound diethyl ether in one well. Concentrations of dissolved solids exceeded the SDWR in 20 percent of ground-water samples collected during the current study period, and concentrations of sulfate and chloride exceeded their respective SDWR in 10 percent of the ground-water samples. Concentrations exceeded the Drinking-Water Advisory Level set by USEPA for sodium in 50 percent of the ground-water samples. Results from the current study period remained similar to results from previous study periods. The median triazine herbicide concentration (triazine screen by ELISA) for the current study period decreased slightly compared to past study periods. In the event that ground water on the reservation is to be used as a drinking-water source, additional treatment may be necessary to remove excess dissolved solids, sulfate, sodium, and chloride.

Kansas↗