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Retrospective ecotoxicological data and current information needs for terrestrial vertebrates residing in coastal habitat of the United States

The Contaminant Exposure and Effects—Terrestrial Vertebrates (CEE-TV) database was developed to conduct simple searches for ecotoxicological information, examine exposure trends, and identify significant data gaps. The CEE-TV database contains 16,696 data records on free-ranging amphibians, reptiles, birds, and mammals residing in estuarine and coastal habitats of the Atlantic, Gulf, and Pacific coasts, Alaska, Hawaii, and the Great Lakes. Information in the database was derived from over 1800 source documents, representing 483 unique species (about 252,000 individuals), with sample collection dates spanning from 1884 to 2003. The majority of the records contain exposure data (generally contaminant concentrations) on a limited number ( n = 209) of chlorinated and brominated compounds, cholinesterase-inhibiting pesticides, economic poisons, metals, and petroleum hydrocarbons, whereas only 9.3% of the records contain biomarker or bioindicator effects data. Temporal examination of exposure data provides evidence of declining concentrations of certain organochlorine pesticides in some avian species ( e.g. , ospreys, Pandion haliaetus ), and an apparent increase in the detection and possibly the incidence of avian die-offs related to cholinesterase-inhibiting pesticides. To identify spatial data gaps, 11,360 database records with specific sampling locations were combined with the boundaries of coastal watersheds, and National Wildlife Refuge and National Park units. Terrestrial vertebrate ecotoxicological data were lacking in 41.9% of 464 coastal watersheds in the continental United States. Recent (1990–2003) terrestrial vertebrate contaminant exposure or effects data were available for only about half of the National Wildlife Refuge and National Park units in the geographic area encompassed by the database. When these data gaps were overlaid on watersheds exhibiting serious water quality problems and/or high vulnerability to pollution, 72 coastal watersheds, and 76 National Wildlife Refuge and 59 National Park units in the continental United States were found to lack recent terrestrial vertebrate ecotoxicology data. Delineation of data gaps in watersheds of concern can help prioritize monitoring in areas with impaired water quality and emphasize the need for comprehensive monitoring to gain a more complete understanding of coastal ecosystem health.

Archives of Environmental Contamination and Toxico↗

Identification of metapopulation dynamics among Northern Goshawks of the Alexander Archipelago, Alaska, and Coastal British Columbia

Northern Goshawks occupying the Alexander Archipelago, Alaska, and coastal British Columbia nest primarily in old-growth and mature forest, which results in spatial heterogeneity in the distribution of individuals across the landscape. We used microsatellite and mitochondrial data to infer genetic structure, gene flow, and fluctuations in population demography through evolutionary time. Patterns in the genetic signatures were used to assess predictions associated with the three population models: panmixia, metapopulation, and isolated populations. Population genetic structure was observed along with asymmetry in gene flow estimates that changed directionality at different temporal scales, consistent with metapopulation model predictions. Therefore, Northern Goshawk assemblages located in the Alexander Archipelago and coastal British Columbia interact through a metapopulation framework, though they may not fit the classic model of a metapopulation. Long-term population sources (coastal mainland British Columbia) and sinks (Revillagigedo and Vancouver islands) were identified. However, there was no trend through evolutionary time in the directionality of dispersal among the remaining assemblages, suggestive of a rescue-effect dynamic. Admiralty, Douglas, and Chichagof island complex appears to be an evolutionarily recent source population in the Alexander Archipelago. In addition, Kupreanof island complex and Kispiox Forest District populations have high dispersal rates to populations in close geographic proximity and potentially serve as local source populations. Metapopulation dynamics occurring in the Alexander Archipelago and coastal British Columbia by Northern Goshawks highlight the importance of both occupied and unoccupied habitats to long-term population persistence of goshawks in this region.

Alaska, British Columbia↗

Resource inventory of marine and estuarine fishes of the West Coast and Alaska: A checklist of North Pacific and Arctic Ocean species from Baja California to the Alaska - Yukon border

This is a comprehensive inventory of the fish species recorded in marine and estuarine waters between the Alaska–Yukon Territory border in the Beaufort Sea and Cabo San Lucas at the southern end of Baja California and out about 300 miles from shore. Our westernmost range includes the eastern Bering Sea and Aleutian Islands. In addition, we have also included our best impressions of the species that might reasonably be expected to be members of the West Coast ichthyofauna but have not yet been captured or reported within our study area. These species are marked with an asterisk (*) and have been reported (1) in the western Bering Sea; (2) off Canada’s Yukon Territory and adjacent portions of the Northwest Territories; (3) along the southern-eastern tip (non-Pacific side) of Baja California; and (4) in waters somewhat beyond 300 miles from shore. Although the term West Coast usually refers to the coast of the continuous western states, our usage herein means the entire study area. The West Coast inventory within this range encompasses fish fauna from 44 orders, 232 families, and a minimum of 1,450 species. Please note that introduced and invasive fish species are marked by double asterisks (**) and that their scientific names are highlighted in gray. We have compiled this document because the most geographically inclusive previous inventories (Jordan and Evermann 1896a, Jordan et al. 1930) are largely of historical interest and are out of date. More recent lists and compilations have either focused on relatively narrow taxonomic groups (e. g., Kramer et al. 1995, Love et al. 2002), are regional in scope (e. g., Hart 1973, Hubbs et al. 1979, Mecklenburg et al. 2002), or focus on commonly observed species (e. g., Miller and Lea 1972, Eschmeyer and Herald 1983). With the explosion of coastal research and environmental assessments, beginning in the 1970s, and more recently, renewed scientific interest in biodiversity (e.g., effects of global climate change), our own studies on related subjects regarding fish populations, assemblages, and biological habitats, suggested this was the appropriate time to update and summarize our knowledge.

Report↗

The National Assessment of Shoreline Change: A GIS compilation of vector shorelines and associated shoreline change data for the sandy shorelines of the California coast

Introduction The Coastal and Marine Geology Program of the U.S. Geological Survey has generated a comprehensive data clearinghouse of digital vector shorelines and shoreline change rates for the sandy shoreline along the California open coast. These data, which are presented herein, were compiled as part of the U.S. Geological Survey's National Assessment of Shoreline Change Project. Beach erosion is a chronic problem along many open-ocean shores of the United States. As coastal populations continue to grow and community infrastructures are threatened by erosion, there is increased demand for accurate information including rates and trends of shoreline migration. There is also a critical need for shoreline change data that is consistent from one coastal region to another. One purpose of this work is to develop standard, repeatable methods for mapping and analyzing shoreline movement so that periodic, systematic, and internally consistent updates of shorelines and shoreline change rates can be made at a National Scale. This data compilation for open-ocean, sandy shorelines of the California coast is one in a series that already includes the Gulf of Mexico and the Southeast Atlantic Coast (Morton et al., 2004; Morton et al., 2005) and will eventually cover Washington, Oregon, and parts of Hawaii and Alaska. Short- and long-term shoreline change evaluations are determined by comparing the positions of three historical shorelines digitized from maps, with a modern shoreline derived from LIDAR (light detection and ranging) topographic surveys. Historical shorelines generally represent the following time-periods: 1850s-1880s, 1920s-1930s, and late 1940s-1970s. The most recent shoreline is from data collected between 1997 and 2002. Long-term rates of change are calculated by linear regression using all four shorelines. Short-term rates of change are end-point rate calculations using the two most recent shorelines. Please refer to our full report on shoreline change of the California coastline at http://pubs.usgs.gov/of/2006/1219/ for additional information regarding methods and results (Hapke et al., 2006). Data in this report are organized into downloadable layers by region (Northern, Central and Southern California) and are provided as vector datasets with metadata. Vector shorelines may represent a compilation of data from one or more sources and these sources are included in the dataset metadata. This project employs the Environmental Systems Research Institute's (ESRI) ArcGIS as it's GIS mapping tool and contains several data layers (shapefiles) that are used to create a geographic view of the California Coast. These vector data form a basemap comprised of polygon and line themes that include a U.S. coastline (1:80,000), U.S. cities, and state boundaries.

California↗

Declining survival of black brant from subarctic and arctic breeding areas

Since the mid 1990s, the number of black brant ( Branta bernicla nigricans ; brant) nests on the Yukon‐Kuskokwim Delta (YKD), Alaska, USA, the historically predominant breeding area of brant, has declined steadily. This has caused researchers and managers to question if arctic breeding populations can compensate for the reduction in brant nests on the YKD. An important component of the assessment of brant population dynamics is having current estimates of first‐year and adult survival. We banded brant at 4 locations in Arctic Alaska and western Canada, and at 1 location in the subarctic, the Tutakoke River (TR) colony on the YKD, 1990–2015. We used joint live and dead mark‐recapture models to estimate first‐year and adult (≥1 yr old) survival of brant. We also used band recovery rates from a Brownie model to assess temporal trends in band recovery rates of adult brant. First‐year survival of brant hatched at TR declined from approximately 0.60 to <0.20 and, although first‐year survival generally was higher for goslings marked in the Arctic, their survival declined from approximately 0.70 in the early 1990s to ≤0.45 in the 2010s. Annual survival of adult females decreased from an average of 0.881 (95% CI = 0.877–0.885) to 0.822 (95% CI = 0.815–0.829) at TR and from 0.851 (95% CI = 0.843–0.860) to 0.821 (95% CI = 0.805–0.836) in the Arctic, from 1990 to 2014. Band recovery rates of adults generally were <1.25% until the last several years of study, when they reached ≤3.5%. Although the current harvest rates may be partially additive to natural mortality, we do not believe that harvest is the main influence on the declines in survival. The general decline in survival rates of brant breeding across a large geographic area may be influenced by a reduction in the quality of migration and wintering ground habitats. We suggest an analysis of seasonal survival of brant to test the hypothesis that declining habitat quality on wintering or spring migration areas is reducing survival. Our results suggest that the number of breeding pairs at TR will continue to decline and also brings into question the ability of arctic breeding populations to grow at a rate necessary to offset the declines on the YKD. Researchers should continue to closely monitor survival and harvest rates of brant, and assess methods currently used to monitor their abundance.

Journal of Wildlife Management↗

Sea otter studies in Glacier Bay National Park and Preserve

Following translocations to the outer coast of Southeast Alaska in 1965, sea otters have been expanding their range and increasing in abundance. We began conducting surveys for sea otters in Cross Sound, Icy Strait, and Glacier Bay, Alaska in 1994, following initial reports (in 1993) of their presence in Glacier Bay. Since 1995, the number of sea otters in Glacier Bay proper has increased from around 5 to more than 1500. Between 1993 and 1997 sea otters were apparently only occasional visitors to Glacier Bay, but in 1998 long-term residence was established as indicated by the presence of adult females and their dependent pups. Sea otter distribution is limited to the Lower Bay, south of Sandy Cove, and is not continuous within that area. Concentrations occur in the vicinity of Sita Reef and Boulder Island and between Pt. Carolus and Rush Pt. on the west side of the Bay (Figure 1). We describe the diet of sea otters during 2001 in Glacier Bay based on visual observations of prey during 456 successful forage dives. In Glacier Bay, diet consisted of 62% clam, 15% mussel, 9% crab, 7% unidentified, 4& urchins, and 4% other. Most prey recovered by sea otters are commercially, socially, or ecologically important species. Species of clam include Saxidomus gigantea, Protothaca staminea, and Mya truncata. Urchins are primarily Strongylocentrotus droebachiensis and the mussel is Modiolus modiolus. Crabs include species of three genera: Cancer, Chinoecetes, and Telmessus. Although we characterize diet at broad geographic scales, we found diet to vary between sites separated by as little as several hundred meters. Dietary variation among and within sites can reflect differences in prey availability and individual specialization. We estimated species composition, density, biomass, and sizes of subtidal clams, urchins, and mussels at 9 sites in lower Glacier Bay. All sites were selected based on the presence of abundant clam siphons. Sites were not selected to allow inference to any area larger than the sampling area (approx 400 m^2). Sites were selected to achieve a broad geographic sample of dense subtidal clam beds within Glacier Bay prior to occupation and foraging by sea otters. There was no direct evidence of otter foraging at any of our clam sampling sites. We sampled 11,568 bivalves representing 14 speces of clam and 2 species of mussel. We sampled 4,981 urchins, all Strongylocentrotus droeobachiensis. Only four species of clam (littleneck clams, Protothaca staminea; butter clams, Saxidomus gigantea; soft-shell claims, Mya truncata; and Macoma sp.) accounted for 91.6% of all clams sampled. Mean total clam density (#/0.25 m^2) across the 9 sites was 62.3. Densities (and se ) of P. staminea averaged 22.6 (1.6) and ranged from 0 to 97. Densities of S. gigantea averaged 14.4 (1.0) and ranged from 0 to 63. Densities of Macoma sp. averaged 14.5 (1.2) and ranged from 0 to 78. Densities of S. droebachiensis averaged 27.3 (1.7) and ranged from 0 to 109. Mean S. droebachiensis sizes ranged from 16 to 30 mm by site. Mean P. staminea sizes ranged from 30 to 53 mm, mean S. gigantea sizes ranged from 51 to 85 mm, and mean Macoma sp. sizes ranged from 14 to 19 mm. Although not the most abundant clam, S. gigantea contributed the greatest proportion to total clam biomass (63%), followed by P. staminea (24%). Sea otters are now well established in limited areas of the lower portions of Glacier Bay. It is likely that distribution and numbers of sea otters will continue to increase in Glacier Bay in the near future. Glacier Bay supports large and diverse populations of clams that are largely unexploited by sea otters presently. It is predictable that the density and sizes of clam populations will decline in response to otter predation. This will result in fewer opportunities for human harvest, but will also trigger ecosystem level changes, as prey for other predators, such as octopus, sea stars, fishes, birds and mammals are modified. Sea ott

Annual Report↗

Variations in Community Exposure and Sensitivity to Tsunami Hazards on the Open-Ocean and Strait of Juan de Fuca Coasts of Washington

Evidence of past events and modeling of potential future events suggest that tsunamis are significant threats to communities on the open-ocean and Strait of Juan de Fuca coasts of Washington. Although potential tsunami-inundation zones from a Cascadia Subduction Zone (CSZ) earthquake have been delineated, the amount and type of human development in tsunami-prone areas have not been documented. A vulnerability assessment using geographic-information-system tools was conducted to document variations in developed land, human populations, economic assets, and critical facilities relative to CSZ-related tsunami-inundation zones among communities on the open-ocean and Strait of Juan de Fuca coasts of Washington (including Clallam, Jefferson, Grays Harbor, and Pacific Counties). The tsunami-inundation zone in these counties contains 42,972 residents (24 percent of the total study-area population), 24,934 employees (33 percent of the total labor force), and 17,029 daily visitors to coastal Washington State Parks. The tsunami-inundation zone also contains 2,908 businesses that generate $4.6 billion in annual sales volume (31 and 40 percent of study-area totals, respectively) and tax parcels with a combined total value of $4.5 billion (25 percent of the study-area total). Although occupancy values are not known for each site, the tsunami-inundation zone also contains numerous dependent-population facilities (for example, schools and child-day-care centers), public venues (for example, religious organizations), and critical facilities (for example, police stations and public-work facilities). Racial diversity of residents in tsunami-prone areas is low?89 percent of residents are White and 8 percent are American Indian or Alaska Native. Nineteen percent of the residents in the tsunami-inundation zone are over 65 years in age, 30 percent of the residents live on unincorporated county lands, and 35 percent of the households are renter occupied. Employees in the tsunami-inundation zone are largely in businesses related to health care and social assistance, accommodation and food services, and retail trade, reflecting businesses that cater to a growing retiree and tourist population. Community vulnerability, described here by exposure (the amount of assets in tsunami-prone areas) and sensitivity (the relative percentage of assets in tsunami-prone areas) varies among 13 incorporated cities, 7 Indian reservations, and 4 counties. The City of Aberdeen has the highest relative community exposure to tsunamis, whereas the City of Long Beach has the highest relative community sensitivity. Levels of community exposure and sensitivity to tsunamis are found to be related to the amount and percentage, respectively, of a community?s land that is in a tsunami-inundation zone. This report will further the dialogue on societal risk to tsunami hazards in Washington and help risk managers to determine where additional risk-reduction strategies may be needed.

Scientific Investigations Report↗

The National Assessment of Shoreline Change: A GIS Compilation of Vector Shorelines and Associated Shoreline Change Data for the U.S. Gulf of Mexico

Introduction The Coastal and Marine Geology Program of the U.S. Geological Survey has generated a comprehensive database of digital vector shorelines and shoreline change rates for the U.S. Gulf of Mexico. These data, which are presented herein, were compiled as part of the U.S. Geological Survey's National Assessment of Shoreline Change Project. Beach erosion is a chronic problem along most open-ocean shores of the United States. As coastal populations continue to grow and community infrastructures are threatened by erosion, there is increased demand for accurate information including rates and trends of shoreline migration. There is also a critical need for shoreline change data that is consistent from one coastal region to another. One purpose of this work is to develop standard repeatable methods for mapping and analyzing shoreline movement so that periodic updates regarding coastal erosion and land loss can be made nationally that are systematic and internally consistent. This data compilation for open-ocean, sandy shorelines of the Gulf of Mexico is the first in a series that will eventually include the Atlantic Coast, Pacific Coast, and parts of Hawaii and Alaska. Short- and long-term shoreline change evaluations are based on merging three historical shorelines with a modern shoreline derived from lidar (light detection and ranging) topographic surveys. Historical shorelines generally represent the following time periods: 1800s, 1920s-1930s, and 1970s. The most recent shoreline is derived from data collected over the period of 1998-2002. Long-term rates of change are calculated by linear regression using all four shorelines. Short-term rates of change are simple end-point rate calculations using the two most recent shorelines. Please refer to our full report on shoreline change in the Gulf of Mexico, National Assessment of Shoreline Change: Part 1, Historical Shoreline Changes and Associated Coastal Land Loss Along the U.S. Gulf of Mexico (USGS Open File Report 2004-1043) for additional information regarding methods and results. Data in this report are organized into data layers by state and are provided as single-point vector datasets with metadata. Vector shorelines may represent a compilation of data from one or more sources and these sources are attributed in the dataset. All data are intended to be GIS-ready inasmuch as the data should not require any additional cleanup, formatting, or renaming of fields in order to use the data in a Geographic Information System (GIS). This project employs the Environmental Systems Research Institute's (ESRI) ArcView as its GIS mapping tool and contains several data layers (or themes) that are used to create a geographic view of the margin off the U.S. Gulf of Mexico. These vector data form a basemap comprised of polygon and line themes that include a U.S. coastline (1:80,000), U.S. cities, and state boundaries.

Open-File Report↗

Catalog of worldwide tidal bore occurrences and characteristics

Documentation of tidal bore phenomena occurring throughout the world aids in defining the typical geographical setting of tidal bores and enables prediction of their occurrence in remote areas. Tidal bores are naturally occurring, tidally generated, solitary, moving water waves up to 6 meters in height that form upstream in estuaries with semidiurnal or nearly semidiurnal tide ranges exceeding 4 meters. Estuarine settings that have tidal bores typically include meandering fluvial systems with shallow gradients. Bores are well defined, having amplitudes greater than wind- or turbulence-caused waves, and may be undular or breaking. Formation of a bore is dependent on depth and velocity of the incoming tide and river outflow. Bores may occur in series (in several channels) or in succession (marking each tidal pulse). Tidal bores propagate up tidal estuaries a greater distance than the width of the estuary and most occur within 100 kilometers upstream of the estuary mouth. Because they are dynamic, bores cause difficulties in some shipping ports and are targets for eradication. Tidal bores are known to occur, or to have occurred in the recent past, in at least 67 localities in 16 countries at all latitudes, including every continent except Antarctica. Parts of Argentina, Canada, Central America, China, Mozambique, Madagascar, Northern Europe, North and South Korea, the United Kingdom, and the U.S.S.R. probably have additional undiscovered or unreported tidal bores. In Turnagain Arm estuary in Alaska, bores cause an abrupt increase in salinity, suspended sediment, surface character, and bottom pressure, a decrease in illumination of the water column, and a change in water temperature. Tidal bores occurring in Turnagain Arm, Alaska, have the

Circular↗

Sea otter studies in Glacier Bay National Park and Preserve: Aerial surveys, foraging observations, and intertidal clam sampling

Following translocations to the outer coast of Southeast Alaska in 1965, sea otters have been expanding their range and increasing in abundance. We began conducting surveys for sea otters in Cross Sound, Icy Strait and Glacier Bay, Alaska in 1994, following initial reports of their presence in Glacier Bay in 1993. Since 1995, the number of sea otters in Glacier Bay proper has increased from about 5 to more than 500. Between 1993 and 1997 sea otters were apparently only occasional visitors to Glacier Bay, but in 1998 long-term residence was established as indicated by the presence of adult females and their dependent pups. Sea otter distribution is limited to the Lower Bay, south of Sandy Cove, and is not continuous within that area. Concentration occur in the vicinity of Sita Reef and Boulder Island and between Pt. Carolus and Rush Pt. on the west side of the Bay (Figure 1). We describe the diet of sea otters in Glacier Bay and south Icy Strait through visual observations of prey during >4,000 successful forage dives. In 2,399 successful foraging dives observed in Glacier Bay proper, diet consisted of 40% clam, 21% urchins, 18% mussel, 4% crab, 5% other and 12% unidentified. Most prey recovered by sea otters are commercially, socially, or ecological important species. Species of clam are primarily Saxidomus gigantea , Protothaca staminea , and Serripes groenlandicus . Urchins are primarily Strongylocentrotus droebachiensis while both mussles, Modiolus modiolus and Mytilus trossulus , are taken. Crabs include species of Cancer, Chinoecetes, Paralithodes, and Telmessus. Although we characterize diet at broad geographic scales, we found diet to vary between sites separated by as little as several hundred meters. Dietary variation among and within sites can reflect differences in prey availability and individual choice. We estimated species composition, density, biomass, and sizes of intertidal clams at 59 sites in Glacier Bay, 14 sites in Idaho Inlet, 12 sites in Port Althorp and 2 sites in Dundas Bay. There is no direct evidence of otter foraging at any of our clam sampling sites except at Port Althorp where sea otters have been present for >20 years and regularly forage intertidally. There is some indication of intertidal foraging in Idaho Inlet, based on reduced mean size of preferred clam species. Sea otters have been present in Idaho Inlet for at least 12 years. We sampled 48 systematically selected sites to allow inference throughout Glacier Bay intertidal areas and 12 preferred habitat intertidal sites to estimate maximum clam densities in the Bay. We also sampled 14 and 12 random sites in Idaho Inlet and Port Althorp, respectively, to provide contrast between sites with and without sea otters. Densities and biomass of intertidal clams were greater in the Lower Bay than either the East or West Arms. Mean densities (#/0.25m 2 ) of all species of clams > 10.0 mm total length were 96.5 at preferred sites, 32.8 in the Lower Bay, 12.2 in the East Arm, 6.6 in the West Arm, 11.32 at Port Althorp and 27.1 at Idaho Inlet. Clam densities were lower in the Upper Arms of Glacier Bay, compared to the Lower Bay and were similar to densities at Port Althorp. In the Lower Bay, clam densities were nearly twice as high at preferred clam sites compared to those systematically sampled. Species of Macoma were the numerically dominant intertidal clam at most sites in Glacier Bay, while Protothaca staminea was dominant at Idaho Inlet and Port Althorp. Biomas (g/0.25m 2 ) was higher in the Lower Bay (23.5) than either Arm (2.1 and .91) and higher at preferred sites (73.4) than systematically selected sites in Glacier Bay. Biomass estimates at Port Althorp were 5.2 and 9.7 at Idaho Inlet. Biomass estimates were dominated by species of Saxidomus , Protothaca and Mya in Glacier Bay and by Protothaca and Saxidomus at Idaho Inlet and Port Althrop. We suspect differences in density and biomass relate to habitat differences between areas within Glacier Bay

Annual Report↗

Surficial geologic map of the Gates of the Arctic National Park and Preserve, Alaska

The Gates of the Arctic National Park and Preserve (GAAR) is centered over the central Brooks Range of northern Alaska. To the west, it abuts the Noatak National Preserve; its eastern boundary is the transportation corridor occupied by the Dalton Highway and the Alyeska Pipeline. The GAAR extends northward beyond the northern flank of the Brooks Range into the southern Arctic Foothills. Its southern boundary lies beyond the south flank of the Brooks Range within foothills and depositional basins of interior Alaska. The accompanying surficial geologic map covers all of the GAAR with the addition of a 10-km (6.2-mi) belt or "buffer zone" beyond its boundaries. A narrower (5-km) buffer zone is employed where the GAAR extends farthest north and south of the Brooks Range, in the north-central and southwestern parts of the map area, respectively. The surfical geologic map incorporates parts of ten surficial geologic maps previously published at 1:250,000 scale. In addition, a small part of the buffer zone mapped in the southwest corner of the map area was compiled from unpublished surficial geologic mapping of the Shungnak 1:250,000-scale quadrangle. Each of those individual maps was developed from (1) aerial and surface observations of morphology and composition of unconsolidated deposits, (2) tracing the distribution and interrelation of terraces, abandoned meltwater channels, moraines, abandoned lake beds, and other landforms, (3) stratigraphic study of exposures along lake shores and river bluffs, (4) examination of sediments and soil profiles in auger borings and test pits, and exposed in roadcuts and placer workings, and (5) analysis of previously published geologic maps and reports. The map units used for those maps and employed in the present compilation are defined on the basis of their physical character, genesis, and age. Relative and absolute ages of the map units were determined from their geographic locations and from their stratigraphic positions and radiocarbon ages.

Alaska↗

Preliminary integrated geologic map databases for the United States: Alabama, Florida, Georgia, Mississippi, North Carolina, and South Carolina

The growth in the use of Geographic Information Systems (GIS) has highlighted the need for regional and national digital geologic maps attributed with age and lithology information. Such maps can be conveniently used to generate derivative maps for purposes including mineral-resource assessment, metallogenic studies, tectonic studies, and environmental research. This Open-File Report is a preliminary version of part of a series of integrated state geologic map databases that cover the entire United States. The only national-scale digital geologic maps that portray most or all of the United States for the conterminous U.S. are the digital version of the King and Beikman (1974a, b) map at a scale of 1:2,500,000, as digitized by Schruben and others (1994) and the digital version of the Geologic Map of North America (Reed and others, 2005a, b) compiled at a scale of 1:5,000,000 which is currently being prepared by the U.S. Geological Survey. The present series of maps is intended to provide the next step in increased detail. State geologic maps that range in scale from 1:100,000 to 1:1,000,000 are available for most of the country, and digital versions of these state maps are the basis of this product. In a few cases, new digital compilations were prepared (e.g. OH, SC, SD) or existing paper maps were digitized (e.g. KY, TX). For Alaska and Hawaii, new regional maps are being compiled and ultimately new state maps will be produced. The digital geologic maps are presented in standardized formats as ARC/INFO (.e00) export files and as ArcView shape (.shp) files. Accompanying these spatial databases are a set of five supplemental data tables that relate the map units to detailed lithologic and age information. The maps for the CONUS have been fitted to a common set of state boundaries based on the 1:100,000 topographic map series of the United States Geological Survey (USGS). When the individual state maps are merged, the combined attribute tables can be used directly with the merged maps to make derivative maps. No attempt has been made to reconcile differences in mapped geology across state lines.

Alabama, Florida, Georgia, Mississippi, North Caro↗

Preliminary integrated geologic map databases for the United States: Central states: Montana, Wyoming, Colorado, New Mexico, North Dakota, South Dakota, Nebraska, Kansas, Oklahoma, Texas, Iowa, Missouri, Arkansas, and Louisiana

The growth in the use of Geographic Information Systems (GIS) has highlighted the need for regional and national digital geologic maps attributed with age and lithology information. Such maps can be conveniently used to generate derivative maps for purposes including mineral-resource assessment, metallogenic studies, tectonic studies, and environmental research. This Open-File Report is a preliminary version of part of a series of integrated state geologic map databases that cover the entire United States. The only national-scale digital geologic maps that portray most or all of the United States for the conterminous U.S. are the digital version of the King and Beikman (1974a, b) map at a scale of 1:2,500,000, as digitized by Schruben and others (1994) and the digital version of the Geologic Map of North America (Reed and others, 2005a, b) compiled at a scale of 1:5,000,000 which is currently being prepared by the U.S. Geological Survey. The present series of maps is intended to provide the next step in increased detail. State geologic maps that range in scale from 1:100,000 to 1:1,000,000 are available for most of the country, and digital versions of these state maps are the basis of this product. In a few cases, new digital compilations were prepared (e.g. OH, SC, SD) or existing paper maps were digitized (e.g. KY, TX). For Alaska and Hawaii, new regional maps are being compiled and ultimately new state maps will be produced. The digital geologic maps are presented in standardized formats as ARC/INFO (.e00) export files and as ArcView shape (.shp) files. Accompanying these spatial databases are a set of five supplemental data tables that relate the map units to detailed lithologic and age information. The maps for the CONUS have been fitted to a common set of state boundaries based on the 1:100,000 topographic map series of the United States Geological Survey (USGS). When the individual state maps are merged, the combined attribute tables can be used directly with the merged maps to make derivative maps. No attempt has been made to reconcile differences in mapped geology across state lines. This is the first version of this product and it will be subsequently updated to include four additional states (North Dakota, South Dakota, Nebraska, and Iowa)

Arkansas, Colorado, Iowa, Kansas, Louisiana, Misso↗

Low-altitude photographic transects of the Arctic Network of National Park Units and Selawik National Wildlife Refuge, Alaska, July 2013

During July 16–18, 2013, low-level photography flights were conducted (with a Cessna 185 with floats and a Cessna 206 with tundra tires) over the five administrative units of the National Park Service Arctic Network (Bering Land Bridge National Preserve, Cape Krusenstern National Monument, Gates of the Arctic National Park and Preserve, Kobuk Valley National Park, and Noatak National Preserve) and the U.S. Fish and Wildlife Service’s Selawik National Wildlife Refuge in northwest Alaska, to provide images of current conditions and prevalence of land-cover types as a baseline for measuring future change, and to complement the existing grid-based sample photography of the region. Total flight time was 17 hours, 46 minutes, and total flight distance was 2,590 kilometers, at a mean altitude of about 300 meters above ground level. A total of 19,167 photographs were taken from five digital camera systems: 1. A Drift® HD-170 (focal length 5.00 mm); 2. A GoPro® Hero3 Black Edition (focal length 2.77 mm); 3. A Panasonic® Lumix DMC-FZ200 (24× superzoom with variable focal length); 4. A Panasonic® Lumix DMC-SZ7 (10x superzoom with variable focal length); and 5. A Canon® Rebel 3Ti with a Sigma zoom lens (18–200 mm focal length). The Drift® HD-170 and GoPro® Hero3 cameras were secured to the struts and underwing for nadir (direct downward) imaging. The Panasonic® and Canon® cameras were each hand-held for oblique-angle landscape images, shooting through the airplanes’ windows, targeting both general landscape conditions as well as landscape features of special interest, such as tundra fire scars and landslips. The Drift® and GoPro® cameras each were set for time-lapse photography at 5-second intervals for overlapping coverage. Photographs from all cameras (100 percent .jpg format) were date- and time-synchronized to geographic positioning system waypoints taken during the flights, also at 5-second intervals, providing precise geotagging (latitude-longitude) of all files. All photographs were adjusted for color saturation and gamma, and nadir photographs were corrected for lens distortion for the Drift® and GoPro® cameras’ 170° wide-angle distortion. EXIF (exchangeable image file format) data on camera settings and geotagging were extracted into spreadsheet databases. An additional 1 hour, 20 minutes, and 43 seconds of high-resolution videos were recorded at 60 frames per second with the GoPro® camera along selected transect segments, and also were image-adjusted and corrected for lens distortion. Geotagged locations of 12,395 nadir photographs from the Drift® and GoPro® cameras were overlayed in a geographic information system (ArcMap 10.0) onto a map of 44 ecotypes (land- and water-cover types) of the Arctic Network study area. Presence and area of each ecotype occurring within a geographic information system window centered on the location of each photograph were recorded and included in the spreadsheet databases. All original and adjusted photographs, videos, geographic positioning system flight tracks, and photograph databases are available by contacting ascweb@usgs.gov.

Alaska↗

National Civil Applications Program

The National Civil Applications Program (NCAP) is a component of the U.S. Geological Survey's (USGS) Mapping, Remote Sensing, and Geographic Investigations Program. The NCAP serves Federal civil agencies by providing for the acquisition, dissemination, and exploitation of classified remote sensing systems and data in support of mission responsibilities for land and resource management, environmental and scientific studies, homeland security, and hazards/disaster management. Civil applications of classified remotely sensed imagery began in 1969 when the USGS provided Federal civil agencies with access to imagery for various uses, including mapping, charting, geodesy, and management of the Nation's lands and resources. The Civil Applications Committee (CAC) was established in 1975 to provide oversight and coordination of these activities. The CAC is composed of 11 Federal departments and independent agencies. The USGS, through the Secretary of the Interior, is delegated responsibility to chair the CAC. The use of classified remotely sensed data has increased dramatically over the past 10 years. There has been an expanded emphasis on using data for environmental monitoring and research and for hazards detection, warning, and emergency response. To address the growing requirements and better serve the Federal civil community, the USGS expanded its investment in NCAP facilities and infrastructure during the 1990s. The USGS Advanced Systems Center (ASC) in Reston, Va., was built in 1993 and serves as the hub of NCAP operations. The USGS operates regional facilities in Denver, Colo.; Rolla, Mo.; Sioux Falls, S. Dak.; and Menlo Park, Calif. An interagency NCAP facility is located in Anchorage, Alaska. Each USGS facility provides the infrastructure, systems, and expertise required to support the growing diversity of civil applications.

Fact Sheet↗

Beringia: Intercontinental exchange and diversification of high latitude mammals and their parasites during the Pliocene and Quaternary

Beringia is the region spanning eastern Asia and northwestern North America that remained ice-free during the full glacial events of the Pleistocene. Numerous questions persist regarding the importance of this region in the evolution of northern faunas. Beringia has been implicated as both a high latitude refugium and as the crossroads (Bering Land Bridge) of the northern continents for boreal mammals. The Beringian Coevolution Project (BCP) is an international collaboration that has provided material to assess the pattern and timing of faunal exchange across the crossroads of the northern continents and the potential impact of past climatic events on differentiation. Mammals and associated parasite specimens have been collected and preserved from more than 200 field sites in eastern Russia, Alaska and northwestern Canada since 1999. Previously, fossils and taxonomic comparisons between Asia and North America mammals have shed light on these events. Molecular phylogenetics based on BCP specimens is now being used to trace the history of faunal exchange and diversification. We have found substantial phylogeographic structure in the Arctic and in Beringia in mustelid carnivores, arvicoline rodents, arctic hares and soricine shrews, including spatially concordant clades and contact zones across taxa that correspond to the edges of Beringia. Among the tapeworms of these mammalian hosts, new perspectives on diversity have also been developed. Arostrilepis horrida (Hymenolepididae) was considered to represent a single widespread and morphologically variable species occurring in a diversity of voles and lemmings in eastern and western Beringia and more broadly across the Holarctic region. The BCP has demonstrated a complex of at least 10 species that are poorly differentiated morphologically. The diversity of Paranoplocephala spp. and Anolocephaloides spp. (Anoplocephalidae) in Beringia included relatively few widespread and morphologically variable species in arvicolines. BCP collections have changed this perspective, allowing the recognition of a series of highly endemic species of Paranoplocephala that demonstrate very narrow host specificity, and additional species complexes among arvicolines. Thus, extensive, previously unrecognized, diversity for tapeworms of 2 major families characterizes the Beringian fauna. By elucidating evolutionary relationships and phylogeographic variation among populations, species and assemblages, refined views of the sequence and timing of biotic expansion, geographic colonization and impact of episodic climate change have been developed for Beringia. Ultimately, Beringia was a determining factor in the structure and biogeography of terrestrial faunas across the Nearctic and Neotropical regions during the Pliocene and Quaternary.

Berengia↗

A workshop model simulating fate and effect of drilling muds and cuttings on benthic communities

Oil and gas exploration and production at marine sites has generated concern over potential environmental impacts resulting from the discharge of spent drilling muds and cuttings. This concern has led to a broad array of publicly and privately sponsored research. This report described a cooperative modeling effort designed to focus information resulting from this research through construction of explicit equations that simulate the potential impacts of discharge drilling fluids (muds) and cuttings on marine communities. The model is the result of collaboration among more than 30 scientists. The principal cooperating organizations were the E.S. Environmental Protection Agency, the U.S. Minerals Management Service, the Offshore Operators Committee, and the Alaska Oil and Gas Association. The overall simulation model can be conceptualized as three connected submodels: Discharge and Plume Fate, Sediment Redistribution, and Benthic Community Effects. On each day of simulation, these submodels are executed in sequence, with flows of information between submodels. The Benthic Community Effects submodel can be further divided into sections that calculate mortality due to burial, mortality due to toxicity, mortality due to resuspension disturbance, and growth of the community. The model represents a series of seven discrete 1-m 2 plots at specified distances along a transect in one direction away from a discharge point. It consists of coupled difference equations for which parameter values can easily be set to evaluate different conditions or to examine the sensitivity of output to various assumptions. Sets of parameter values were developed to represent four general cases or scenarios: (1) a shallow (5 m), cold environment with ice cover during a substantial fraction of the year, such as might be encountered in the Beaufort Sea, Alaska; (2) a shallow (20 m), temperate environment, such as might be encountered in the Gulf of Mexico; (3) a deeper (80 m), temperate environment, such as might be encountered in the Gulf of Mexico; and (4) a very deep (1,000 m) environment, such as might be encountered on the Atlantic slope. The focus of the modeling effort was on the connection of a reasonable representation of physical fate to the biological responses of populations, rather than on highly detailed representations of individual processes. For example, the calculations of physical fate are not as detailed as those in the recently published model of Brandsma et al. (1983). The value of the model described herein is in the broad scope of processes that are explicitly represented and linked together. The model cannot be considered to produce reliable predictions of the quantitative impacts of discharged drilling fluids and cuttings on biological populations at a particular site. Limitations of the model in predicting integrated fate and effects can be traced to three general areas: level of refinement of the algorithms used in the model; lack of understanding of the processes determining fate and effects; and parameter and data values. Despite the limitations, several qualitative conclusions concerning both potential impacts and the importance of various remaining data gaps can be drawn from the modeling effort. These include: (1) Simple, unequivocal conclusions about fate and effects across geographical regions and drilling operations are difficult, if not misleading, due to the large amount of variability in characteristics of discharged materials (e.g., oil content and toxicity), discharge conditions (e.g., duration of drilling operations), physical environments (e.g., water depth, current direction, and sediment disturbance regimes), and biological communities (e.g., intrinsic growth rates). Different combinations of these characteristics can result in substantial differences in simulated environmental fate and biological effects. For examples, simulated recovery in some high-energy environments occurs within months after the cessation of discharge operations, even at heavily impacted sites, whereas simulated recover in some low-energy environments takes years at heavily impacted sites. <2) Considerable difficulties remain in the reliable extrapolation of results from laboratory toxicity experiments to predictions of population effects in the field. (3) The volume of material discharged and duration of operations in the production drilling operations simulated by the model are sufficient to produce substantial simulated biological impacts at some plots, both in terms of differences from a control plot during the period of discharge operations, and in terms of the recovery period following the perturbations. Evaluation of the significance of potential effects involves the following factors: • Definition of a specific spatial and temporal reference frame (e.g., What is the natural variation? Is 1 year to be considered a "long" or "short" time? Is 50 m to be considered a "large" or "trivial" distance? • Consideration of rare or unique resources and particularly sensitive biotic assemblages. • Consideration of the potential for long term, cumulative effects. Some of these aspects are clearly beyond the scope of this modeling efforts (e.g., the model does not simulate the long term fate of resuspended material). The model does, however, contain an internal "reference frame" by comparison to simulated behavior at a control plot. The model, in general, simulates substantial "natural" variation at the reference or control plots, both over time, due to sediment disturbance events in medium to high energy environments, and over space, due to geographically varying conditions, such as water depth and current regime.

Report↗

Preliminary integrated geologic map databases for the United States: Kentucky, Ohio, Tennessee, and West Virginia

The growth in the use of Geographic Information Systems (GIS) has highlighted the need for regional and national digital geologic maps attributed with age and lithology information. Such maps can be conveniently used to generate derivative maps for purposes including mineral-resource assessment, metallogenic studies, tectonic studies, and environmental research. This Open-File Report is a preliminary version of part of a series of integrated state geologic map databases that cover the entire United States. The only national-scale digital geologic maps that portray most or all of the United States for the conterminous U.S. are the digital version of the King and Beikman (1974a, b) map at a scale of 1:2,500,000, as digitized by Schruben and others (1994) and the generalized digital version (Reed and Bush, 2004) of the Geologic Map of North America (Reed and others, 2005a, b) compiled at a scale of 1:5,000,000. The present series of maps is intended to provide the next step in increased detail. State geologic maps that range in scale from 1:100,000 to 1:1,000,000 are available for most of the country, and digital versions of these state maps are the basis for this product. In a few cases, new digital compilations were prepared (e.g. Ohio, South Carloina, South Dakota) or existing paper maps were digitized (e.g. Kentucky, Texas). Also as part of this series, new regional maps for Alaska and Hawaii are being compiled and ultimately new state maps will be produced. The digital geologic maps are presented in standardized formats as ARC/INFO export (.e00) files and as ArcView shape (.shp) files. Accompanying these spatial databases are a set of five supplemental attribute tables that relate the map units to detailed lithologic and age information. The maps for the CONUS have been fitted to a common set of state boundaries based on the 1:100,000 topographic map series of the United States Geological Survey (USGS). When the individual state maps are merged, the combined attribute tables can be used directly with the merged maps to make derivative maps. No attempt has been made to reconcile differences in mapped geology across state lines.

Kentucky, Ohio, Tennessee, West Virginia↗