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USGS2002

Effects of colony relocation on diet and productivity of Caspian terns

We investigated the efficacy of management to reduce the impact of Caspian tern ( Sterna caspia ) predation on survival of juvenile salmonids (Oncorhynchus spp.) in the Columbia River estuary. Resource managers sought to relocate approximately 9,000 pairs of terns nesting on Rice Island (river km 34) to East Sand Island (river km 8), where terns were expected to prey on fewer juvenile salmonids. Efforts to attract terns to nest on East Sand Island included creation of nesting habitat, use of social attraction techniques, and predator control, with concurrent efforts to discourage terns from nesting on Rice Island. This approach was successful in completely relocating the tern colony from Rice Island to East Sand Island by the third breeding season. Juvenile salmonids decreased and marine forage fishes (i.e., herring, sardine, anchovy, smelt, surfperch, Pacific sand lance) increased in the diet of Caspian terns nesting on East Sand Island, compared with terns nesting on Rice Island. During 1999 and 2000, the diet of terns nesting on Rice Island consisted of 77% and 90% juvenile salmonids, respectively, while during 1999, 2000, and 2001, the diet of terns nesting on East Sand Island consisted of 46%, 47%, and 33% juvenile salmonids, respectively. Nesting success of Caspian terns was consistently and substantially higher on East Sand Island than on Rice Island. These results indicate that relocating the Caspian tern colony was an effective management action for reducing predation on juvenile salmonids without harm to the population of breeding terns, at least in the short term. The success of this management approach largely was a consequence of the nesting and foraging ecology of Caspian terns: the species shifts breeding colony sites frequently in response to changing habitats, and the species is a generalist forager, preying on the most available forage fish near the colony.

Oregon, Washington↗

USGS2025

Genetics of wild, whirling disease resistant rainbow trout populations in Colorado

Introduction: Myxobolus cerebralis , the parasite responsible for salmonid whirling disease, was unintentionally introduced to and became established in Colorado in the 1990s. Mortality of young-of-year fish due to infection by M. cerebralis resulted in recruitment failure and subsequent significant declines in Rainbow Trout ( Oncorhynchus mykiss ) populations. The complex multistage lifecycle of M. cerebralis makes it difficult to eradicate and manage, and hatchery control strategies do not work in the wild. A viable method that has been utilized for wild populations is enhancing host resistance. Myxobolus cerebralis resistant Rainbow Trout were discovered at a hatchery in Germany and subsequently incorporated into Colorado's brood stock program. Since 2004, M. cerebralis resistant strains have been stocked into all major Colorado coldwater drainages to re-establish Rainbow Trout populations after whirling disease-related declines, with documented survival and reproduction of stocked disease resistant fish. Methods and results: Genetic population assignment tests (via putatively neutral microsatellite markers) were used to monitor the stocked populations and indicated that, after only a few years, many of the individuals in these populations unexpectedly assigned to genetic strains that were historically susceptible to M. cerebralis . To further investigate the genetic composition of these fish, a single nucleotide polymorphism (SNP) panel was used to determine the percent genetic composition of resistant strain in these individuals. Microsatellites and SNPs provided similar results, indicating a low percentage of ancestry from the resistant strain in these fish, but they continued to survive exposure to M. cerebralis , suggesting that these individuals possessed genetic loci necessary for resistance. Finally, a quantitative trait locus (QTL) region (termed WDRES-9) was used to identify individuals with alleles associated with disease resistance. Implementation of the WDRES-9 QTL test allowed for more accurate determination of M. cerebralis resistant individuals within wild populations and better described their variability in resistance.

Colorado↗

USGS2009

Lead in the environment

Anthropogenic uses of lead have probably altered its availability and environmental distribution more than any other toxic element. Consequently, lead concentrations in many living organisms may be approaching thresholds of toxicity for the adverse effects of lead. Such thresholds are difficult to define, as they vary with the chemical and physical form of lead, exposure regime, other elements present and also vary both within and between species. The technological capability to accurately quantify low lead concentrations has increased over the last decade, and physiological and behavioral effects have been measured in wildlife with tissue lead concentrations below those previously considered safe for humans.s.236 Consequently. lead criteria for the protection of wildlife and human health are frequently under review, and 'thresholds' of lead toxicity are being reconsidered. Proposed lead criteria for the protection of natural resources have been reviewed by Eisler. Uptake of lead by plants is limited by its generally low availability in soils and sediments, and toxicity may be limited by storage mechanisms and its apparently limited translocation within most plants. Lead does not generally accumulate within the foliar parts of plants, which limits its transfer to higher trophic levels. Although lead may concentrate in plant and animal tissues, no evidence of biomagnification exists. Acid deposition onto surface waters and soils with low buffering capacity may influence the availability of lead for uptake by plants and animals, and this may merit investigation at susceptible sites. The biological significance of chronic low-level lead exposure to wildlife is sometimes difficult to quantify. Animals living in urban environments or near point sources of lead emission are inevitably subject to greater exposure to lead and enhanced risk of lead poisoning. Increasingly strict controls on lead emissions in many countries have reduced exposure to lead from some sources. and the .reduction of lead in gasoline has resulted in lower tissue lead concentrations in humans and wildlife from many, particularly urban, locations. However, it has been suggested that increasing use of organic lead compounds as catalysts for the production of plastics and as wood preservatives and biocides could adversely affect wildlife. The most significant source of direct wildlife mortality from lead is spent gunshot and fishing sinkers. Elevated mortality from shot ingestion in avian species resulted in the introduction of nontoxic (steel) shot zones along certain flyways in the United States in the mid-1970s and a total ban on the use of lead for waterfowl and coot hunting nationwide by 1992. Several other countries are now following suit and have either banned or are in the process of restricting the use of lead shot for waterfowl hunting. In the United States it has been estimated that since the 1986 hunting season. when the use of nontoxic shot became widespread. over 6 million ducks have not been lost to lead poisoning. Raptors, especially eagles, have also apparently benefited. although lead poisoning from ingestion of bullet fragments remains a problem for the critically threatened California condor. Quantifying reductions in lead mortality rates would be difficult since eagle populations throughout North America are rapidly recovering from other anthropogenic perturbations, especially organochlorine pesticides.

Book chapter↗

USGS2008

Effects of food limitation and emigration on self-thinning in experimental minnow cohorts

1. &ensp;The theory of food-regulated self-thinning (FST) for mobile animals predicts population density ( N ) to be an inverse function of mean body mass ( W ) scaled to an exponent ( b ), such that N = k W −b , where k is a constant. FST also predicts energy requirements (or energy flow) to remain constant over time (termed energetic equivalence) as losses to cohorts (e.g. emigration and mortality) are balanced by increased growth of surviving individuals. 2. &ensp;To test these predictions, we analysed the dynamics of six experimental minnow cohorts. Replicate populations of fish were held under identical conditions with a constant and limited supply of food over a 126-day period. Half of the cohorts were open to emigration, and half were closed so that fish could only be lost through starvation mortality. 3. &ensp;Patterns of self-thinning indicated non-linear changes in population density and energy flow in relation to changes in mean body mass and time, respectively. Non-linear patterns of self-thinning were probably due to a delayed growth response to changes in population density effected through mortality and/or emigration. Contrary to results of similar experiments on other fish, emigration did not have a significant influence on the pattern of self-thinning. 4. &ensp;These results may be attributed to trophic interactions within cohorts and the importance of social behaviour to cohort dynamics. Both population density and energy flow in our experimental populations appeared to cycle, with episodes of starvation and mortality alternating with food recovery and weight gain, as predicted by recent models of stepwise die-off and stunted growth in animal cohorts. 5. &ensp;Most of the support for FST in mobile animals comes from observational data on mean body mass and population density. Potentially important mechanisms, including the manner in which individuals are lost or retained in populations, are usually not investigated directly. Such tests of FST can only provide equivocal support. Detailed observational study and controlled experiments are needed to understand casual mechanisms.

Journal of Animal Ecology↗

USGS2022

Conflicts among protected native birds and valuable sport fishes: Potential pelican predation effects

Reservoirs are examples of novel ecosystems that have developed into popular sport fisheries; these systems are also becoming seasonal refuges for migratory birds, including the piscivorous American white pelican ( Pelecanus erythrorhynchos ). We (1) investigated the proportion of cutthroat trout ( Oncorhynchus clarkii utah ) and other species consumed by pelicans, (2) compared whether pelicans have an adverse effect on cutthroat trout spawning movement, and (3) determined the importance of pelican predation relative to other sources of fish mortality in Strawberry Reservoir, Utah, USA. Pelican diet samples consisted of >85% Utah sucker ( Catostomus ardens ), 6% Utah chub ( Gila atraria ), and 3% cutthroat trout. Based on bioenergetics, we estimated that pelicans consumed 384–3020 individual cutthroat trout (0.17%–1.3% of population), in contrast to 14 166–27 196 nongame sucker and chub. Bird-related mortality rate ranged from 1% to 6% for stocked, PIT (passive integrated transponder)-tagged adult cutthroat trout and from 4% to 16% for subadult cutthroat trout. Based on these results, any management action taken to control pelican predation would need to be weighed against the benefits of nongame fish removal and the protected status of pelicans.

Utah↗

USGS2012

Evidence of hypoxic foraging forays by yellow perch ( Perca flavescens ) and potential consequences for prey consumption

Previous studies in a variety of ecosystems have shown that ecologically and economically important benthic and bentho-pelagic fishes avoid hypoxic (<2 mg O2 L −1 ) habitats by moving vertically or horizontally to more oxygenated areas. While avoidance of hypoxic conditions generally leads to a complete shift away from preferred benthic prey, some individual fish continue to consume benthic prey items in spite of bottom hypoxia, suggesting complex habitat utilisation and foraging patterns. For example, Lake Erie yellow perch ( Perca flavescens ) continue to consume benthic prey, despite being displaced vertically and horizontally by hypolimnetic hypoxia. We hypothesised that hypolimnetic hypoxia can negatively affect yellow perch by altering their distribution and inducing energetically expensive foraging behaviour. To test this hypothesis, we used drifting hydroacoustics and trawl sampling to quantify water column distribution, sub-daily vertical movement and foraging behaviour of yellow perch within hypoxic and normoxic habitats of Lake Erie’s central basin during August-September 2007. We also investigated the effects of rapid changes in ambient oxygen conditions on yellow perch consumption potential by exposing yellow perch to various static and fluctuating oxygen conditions in a controlled laboratory experiment. Our results indicate that, while yellow perch in general avoid hypoxic conditions, some individuals undertake foraging forays into hypoxic habitats where they experience greater fluctuations in abiotic conditions (pressure, temperature and oxygen concentration) than at normoxic sites. However, laboratory results suggest short-term exposure to low oxygen conditions did not negatively impact consumption potential of yellow perch. Detailed understanding of sub-daily individual behaviours may be crucial for determining interactive individual- and ecosystem-level effects of stressors such as hypoxia.

Freshwater Biology↗

USGS2019

In vivo effects of 17α-ethinylestradiol, 17B-estradiol and 4-nonylphenol on insulin-like growth-factor binding proteins (igfbps) in Atlantic salmon

Feminizing endocrine disrupting compounds (EDCs) affect the growth and development of teleost fishes. The major regulator of growth performance, the growth hormone (Gh)/insulin-like growth-factor (Igf) system, is sensitive to estrogenic compounds and mediates certain physiological and potentially behavioral consequences of EDC exposure. Igf binding proteins (Igfbps) are key modulators of Igf activity, but their alteration by EDCs has not been examined. We investigated two life-stages (fry and smolts) of Atlantic salmon ( Salmo salar ), and characterized how the Gh/Igf/Igfbp system responded to waterborne 17α-ethinylestradiol (EE 2 ), 17β-estradiol (E 2 ) and 4-nonylphenol (NP). Fry exposed to EE 2 and NP for 21 days had increased hepatic vitellogenin ( vtg ) mRNA levels while hepatic estrogen receptor α ( erα ), gh receptor (ghr) , igf1 and igf2 mRNA levels were decreased. NP-exposed fry had reduced body mass and total length compared to controls. EE 2 and NP reduced hepatic igfbp1b1 , -2a , -2b1 , -4 , -5b2 and -6b1 , and stimulated igfbp5a . In smolts, hepatic vtg mRNA levels were induced following 4-day exposures to all three EDCs, while erα only responded to EE 2 and E 2 . EDC exposures did not affect body mass or fork length; however, EE 2 diminished plasma Gh and Igf1 levels in parallel with reductions in hepatic ghr and igf1 . In smolts, EE 2 and E 2 diminished hepatic igfbp1b1 , -4 and -6b1 , and stimulated igfbp5a . There were no signs of compromised ionoregulation in smolts, as indicated by unchanged branchial ion pump/transporter mRNA levels. We conclude that hepatic igfbps respond (directly and/or indirectly) to environmental estrogens during two key life-stages of Atlantic salmon, and thus may modulate the growth and development of exposed individuals.

Aquatic Toxicology↗

USGS2014

Extending the turbidity record: making additional use of continuous data from turbidity, acoustic-Doppler, and laser diffraction instruments and suspended-sediment samples in the Colorado River in Grand Canyon

Turbidity is a measure of the scattering and absorption of light in water, which in rivers is primarily caused by particles, usually sediment, suspended in the water. Turbidity varies significantly with differences in the design of the instrument measuring turbidity, a point that is illustrated in this study by side-by-side comparisons of two different models of instruments. Turbidity also varies with changes in the physical parameters of the particles in the water, such as concentration, grain size, grain shape, and color. A turbidity instrument that is commonly used for continuous monitoring of rivers has a light source in the near-infrared range (860±30 nanometers) and a detector oriented 90 degrees from the incident light path. This type of optical turbidity instrument has a limited measurement range (depending on pathlength) that is unable to capture the high turbidity levels of rivers that carry high suspended-sediment loads. The Colorado River in Grand Canyon is one such river, in which approximately 60 percent of the range in suspended-sediment concentration during the study period had unmeasurable turbidity using this type of optical instrument. Although some optical turbidimeters using backscatter or other techniques can measure higher concentrations of suspended sediment than the models used in this study, the maximum turbidity measurable using these other turbidimeters may still be exceeded in conditions of especially high concentrations of suspended silt and clay. In Grand Canyon, the existing optical turbidity instruments remain in use in part to provide consistency over time as new techniques are investigated. As a result, during these periods of high suspended-sediment concentration, turbidity values that could not be measured with the optical turbidity instruments were instead estimated from concurrent acoustic attenuation data collected using side-looking acoustic-Doppler profiler (ADP) instruments. Extending the turbidity record to the full range of sediment concentrations in the study area using data from the ADP instruments is particularly useful for biological studies. In Grand Canyon, turbidity has been correlated with food availability for aquatic organisms (gross primary production) as well as with fish behavior specific to predator-prey interactions. On the basis of the complete “extended” turbidity record and the relation between suspended-sediment concentration and turbidity, levels were higher before the construction of Glen Canyon Dam by a factor of approximately 2,000 at the Lees Ferry monitoring station (15 miles downstream from the dam) and by a factor of approximately 20 at the monitoring station 87 miles downstream from Lees Ferry (102 miles downstream from the dam). A comparison of turbidity data with data from Laser In-Situ Scattering and Transmissometry (LISST) laser-diffraction instruments, suspended-sediment concentration data, and ADP data shows the influence of the physical properties of suspended sediment. Apparent outliers in relations between turbidity, ADP, and suspended-sediment data during two events within the study period, a 2007 tributary flood from a watershed altered by a recent wildfire and a 2008 experimental controlled-flood release from Glen Canyon Dam, are explained in part by atypical grain sizes, shapes, densities, colors, and (or) clay mineral assemblages of suspended sediment occurring in the Colorado River during these two events. These analyses demonstrate the value of using multiple data-collection strategies for turbidity and sediment-transport studies and of continuous monitoring for capturing the full range and duration of turbidity and sediment-transport conditions, identifying the provenance of the sediment causing turbidity, and detecting physical and chemical processes that may be important for management of critical physical and biological resources.

Arizona↗

USGS2014

Identifying non-point sources of endocrine active compounds and their biological impacts in freshwater lakes

Contaminants of emerging concern, particularly endocrine active compounds (EACs), have been identified as a threat to aquatic wildlife. However, little is known about the impact of EACs on lakes through groundwater from onsite wastewater treatment systems (OWTS). This study aims to identify specific contributions of OWTS to Sullivan Lake, Minnesota, USA. Lake hydrology, water chemistry, caged bluegill sunfish ( Lepomis macrochirus ), and larval fathead minnow ( Pimephales promelas ) exposures were used to assess whether EACs entered the lake through OWTS inflow and the resultant biological impact on fish. Study areas included two OWTS-influenced near-shore sites with native bluegill spawning habitats and two in-lake control sites without nearby EAC sources. Caged bluegill sunfish were analyzed for plasma vitellogenin concentrations, organosomatic indices, and histological pathologies. Surface and porewater was collected from each site and analyzed for EACs. Porewater was also collected for laboratory exposure of larval fathead minnow, before analysis of predator escape performance and gene expression profiles. Chemical analysis showed EACs present at low concentrations at each study site, whereas discrete variations were reported between sites and between summer and fall samplings. Body condition index and liver vacuolization of sunfish were found to differ among study sites as did gene expression in exposed larval fathead minnows. Interestingly, biological exposure data and water chemistry did not match. Therefore, although results highlight the potential impacts of seepage from OWTS, further investigation of mixture effects and life history factor as well as chemical fate is warranted.

Minnesota↗

USGS2001

Copper avoidance and mortality of juvenile brown trout ( Salmo trutta ) in tests with copper-sulfate-treated water from West Branch Reservoir, Putnam County, New York

Copper-avoidance tests and acute-toxicity (mortality) tests on hatchery-reared, young-of- the-year brown trout ( salmo trutta ) were conducted with water from West Branch Reservoir to assess the avoidance response to copper sulfate treatment, which is used occasionally by New York City Department of Environmental Protection to decrease phytoplankton populations in the reservoir. Avoidance-test results indicate that juvenile brown trout tend to avoid dissolved copper concentrations greater than about 55 μg/L (micrograms per liter), which is the approximate avoidance-response threshold. The mean net avoidance response of brown trout to dissolved copper concentrations of 70 and 100 μg/L, and possibly 80 μg/L, was significantly different (at α= 0.1) from the mean net avoidance response of fish to control (untreated) water and to treated water at most other tested concentrations. Mortality-test results indicate that the 96-hr median lethal concentration (LC 50 ) of dissolved copper was 61.5 μg/L. All (100 percent) of the brown trout died at a dissolved copper concentration of 85 μg/L, many died at concentrations of 62 μg/L and 70 μg/L, and none died in the control waters (7 μg/L) or at concentrations of 10, 20, or 45 μg/L. The estimated concentration of dissolved copper that caused fish mortality (threshold) was 53.5 μg/L, virtually equivalent to the avoidance-response threshold. Additional factors that could affect the copper-avoidance and mortality response of individual brown trout and their populations in West Branch Reservoir include seasonal variations in certain water-quality parameters, copper-treatment regimes, natural fish distributions during treatment, and increased tolerance due to acclimation. These warrant additional study before the findings from this study can be used to predict the effects that copper sulfate treatments have on resident fish populations in New York City reservoirs.

New York↗

USGS2011

Temporal trends in algae, benthic invertebrate, and fish assemblages in streams and rivers draining basins of varying land use in the south-central United States, 1993-2007

Site-specific temporal trends in algae, benthic invertebrate, and fish assemblages were investigated in 15 streams and rivers draining basins of varying land use in the south-central United States from 1993–2007. A multivariate approach was used to identify sites with statistically significant trends in aquatic assemblages which were then tested for correlations with assemblage metrics and abiotic environmental variables (climate, water quality, streamflow, and physical habitat). Significant temporal trends in one or more of the aquatic assemblages were identified at more than half (eight of 15) of the streams in the study. Assemblage metrics and abiotic environmental variables found to be significantly correlated with aquatic assemblages differed between land use categories. For example, algal assemblages at undeveloped sites were associated with physical habitat, while algal assemblages at more anthropogenically altered sites (agricultural and urban) were associated with nutrient and streamflow metrics. In urban stream sites results indicate that streamflow metrics may act as important controls on water quality conditions, as represented by aquatic assemblage metrics. The site-specific identification of biotic trends and abiotic–biotic relations presented here will provide valuable information that can inform interpretation of continued monitoring data and the design of future studies. In addition, the subsets of abiotic variables identified as potentially important drivers of change in aquatic assemblages provide policy makers and resource managers with information that will assist in the design and implementation of monitoring programs aimed at the protection of aquatic resources.

Arkansas, Colorado, Kansas, Kentucky, Louisiana, M↗

USGS2013

A compilation of U.S. Geological Survey pesticide concentration data for water and sediment in the Sacramento–San Joaquin Delta region: 1990–2010

Beginning around 2000, abundance indices of four pelagic fishes (delta smelt, striped bass, longfin smelt, and threadfin shad) within the San Francisco Bay and Sacramento–San Joaquin Delta began to decline sharply (Sommer and others, 2007). These declines collectively became known as the pelagic organism decline (POD). No single cause has been linked to this decline, and current theories suggest that combinations of multiple stressors are likely to blame. Contaminants (including current-use pesticides) are one potential stressor being investigated for its role in the POD (Anderson, 2007). Pesticide concentration data collected by the U.S. Geological Survey (USGS) at multiple sites in the delta region over the past two decades are critical to understanding the potential effects of current-use pesticides on species of concern as well as the overall health of the delta ecosystem. In April 2010, a compilation of contaminant data for the delta region was published by the State Water Resources Control Board (Johnson and others, 2010). Pesticide occurrence was the major focus of this report, which concluded that “there was insufficient high quality data available to make conclusions about the potential role of specific contaminants in the POD.” The report cited multiple sources; however, data collected by the USGS were not included in the publication even though these data met all criteria listed for inclusion in the report. What follows is a summary of publicly available USGS data for pesticide concentrations in surface water and sediments within the Sacramento–San Joaquin Delta region from the years 1990 through 2010. Data were retrieved though the USGS National Water Information System (NWIS) database, a publicly available online-data repository (U.S. Geological Survey, 1998), and from published USGS reports (also available online at http://pubs.er.usgs.gov/). The majority of the data were collected in support of two long term USGS monitoring programs—National Water Quality Assessment Program (NAWQA; http://water.usgs.gov/ nawqa/) and National Stream Quality Accounting Network (NASQAN; http://water.usgs.gov/nasqan/)—and through projects associated with the USGS Toxics Substances Hydrology Program (http://toxics.usgs.gov/). In addition, data were collected during multiple research projects that were supported by various federal, state, and local agencies. Although these data have been previously published in some form, it is hoped that by focusing on samples collected within the delta region and presenting these data in a concise format, they will be a valuable resource for scientists, resource managers, and members of the public working to understand the role of pesticides in the POD and their potential effects on the overall health of the delta ecosystem.

California↗

USGS2009

Assessment of Local Recharge Area Characteristics of Four Caves in Northern Arkansas and Northeastern Oklahoma, 2004-07

A study was conducted from 2004 to 2007 by the U.S. Geological Survey in cooperation with the U.S. Fish and Wildlife Service to assess the characteristics of the local recharge areas of four caves in northern Arkansas and northeastern Oklahoma that provide habitat for a number of unique organisms. Characterization of the local recharge areas are important because the caves occur in a predominately karst system and because land use proximal to the caves, including areas suspected to lie within the local recharge areas, may include activities with potentially deleterious effects to cave water quality. An integrated approach was used to determine the hydrogeologic characteristics and the extent of the local recharge areas of Civil War Cave, January-Stansbury Cave, Nesbitt Spring Cave, and Wasson's Mud Cave. This approach incorporated methods of hydrology, structural geology, geomorphology, and geochemistry. Continuous water-level and water-temperature data were collected at each cave for various periods to determine recharge characteristics. Field investigations were conducted to determine surficial controls affecting the groundwater flow and connections of the groundwater system to land-surface processes in each study area. Qualitative groundwater tracing also was conducted at each cave to help define the local recharge areas. These independent methods of investigation provided multiple lines of evidence for effectively describing the behavior of these complex hydrologic systems. Civil War Cave is located near the city of Bentonville in Benton County, Arkansas, and provides habitat for the Ozark cavefish. Civil War Cave is developed entirely within the epikarst of the upper Boone Formation, and recharge to Civil War Cave occurs from the Boone Formation (Springfield Plateau aquifer). The daily mean discharge for the period of study was 0.59 cubic feet per second and ranged from 0.19 to 2.8 cubic feet per second. The mean water temperature for Civil War Cave was 14.0 degrees Celsius. The calculated recharge area for Civil War Cave ranged from 0.13 to 2.5 square miles using the water-balance equation to 3.80 square miles using a normalized base-flow method. Tracer tests indicated a portion of the water within Civil War Cave was from across a major topographic divide located to the southwest. January-Stansbury Cave is located in Delaware County in northeastern Oklahoma, and provides habitat for the Oklahoma cave crayfish and the Ozark cavefish. January-Stansbury Cave is developed in the St. Joe Limestone member of the Boone Formation. The daily mean discharge for the period of study was 1.0 cubic foot per second and ranged from 0.35 to 8.7 cubic feet per second. The mean water temperature for January-Stansbury Cave was 14.3 degrees. The calculated recharge area for January-Stansbury Cave using the water-balance equation ranged from approximately 0.04 to 0.83 square miles. Tracer tests generally showed water discharging from January-Stansbury Cave during high flow originates from within the topographic drainage area and from an area outside the topographic drainage area to the southwest. Nesbitt Spring Cave is located near the city of Mountain View in north-central Arkansas and provides habitat for the Hell Creek cave crayfish. Nesbitt Spring Cave is developed in the Plattin Limestone (Ozark aquifer) and is recharged through the Boone Formation (Springfield Plateau aquifer). The mean daily discharge for the period of study was 4.5 cubic feet per second and ranged from 0.39 to 70.7 cubic feet per second. The mean water temperature for Nesbitt Spring Cave was 14.2 degrees Celsius. The calculated recharge area for Nesbitt Spring Cave using the water-balance equation ranged from 0.49 square mile to 4.0 square miles. Tracer tests generally showed a portion of water discharging from Nesbitt Spring during high flow originates from outside the topographic drainage area. Wasson's Mud Cave is located near the city of Springtown

Scientific Investigations Report↗

USGS2014

Productivity and linkages of the food web of the southern region of the western Antarctic Peninsula continental shelf

The productivity and linkages in the food web of the southern region of the west Antarctic Peninsula continental shelf were investigated using a multi-trophic level mass balance model. Data collected during the Southern Ocean Global Ocean Ecosystem Dynamics field program were combined with data from the literature on the abundance and diet composition of zooplankton, fish, seabirds and marine mammals to calculate energy flows in the food web and to infer the overall food web structure at the annual level. Sensitivity analyses investigated the effects of variability in growth and biomass of Antarctic krill ( Euphausia superba ) and in the biomass of Antarctic krill predators on the structure and energy fluxes in the food web. Scenario simulations provided insights into the potential responses of the food web to a reduced contribution of large phytoplankton (diatom) production to total primary production, and to reduced consumption of primary production by Antarctic krill and mesozooplankton coincident with increased consumption by microzooplankton and salps. Model-derived estimates of primary production were 187–207 g C m −2 y −1 , which are consistent with observed values (47–351 g C m −2 y −1 ). Simulations showed that Antarctic krill provide the majority of energy needed to sustain seabird and marine mammal production, thereby exerting a bottom-up control on higher trophic level predators. Energy transfer to top predators via mesozooplanton was a less efficient pathway, and salps were a production loss pathway because little of the primary production they consumed was passed to higher trophic levels. Increased predominance of small phytoplankton (nanoflagellates and cryptophytes) reduced the production of Antarctic krill and of its predators, including seabirds and seals.

Progress in Oceanography↗

USGS2022

A suction pump sampler for invertebrate drift detects exceptionally high concentrations of small invertebrates that drift nets miss

Invertebrate drift is a key process in riverine ecosystems controlling aquatic invertebrate movement, distribution, and availability to fish as prey. However, accurately sampling drift across a wide range of invertebrate sizes is difficult because small invertebrates slip through coarse-mesh drift nets, and fine mesh clogs more easily, which reduces filtration efficiency and measurement accuracy. To avoid this limiting tradeoff, we developed a gas-powered drift pump which pours 20 m3/hour of river water through nested 80- and 750-m nets suspended in the air, and we tested it against a conventional 250-m drift net during low and high flows in a clearwater Alaskan river. The drift pump detected a geometric mean drift concentration of 467 invertebrates m-3 and maximum of 5637 m-3, eleven times the mean concentration of 42 m-3 from the drift net. Invertebrates  3 mm length, primarily chironomids, comprised the entire difference. Studies in which the drift of 0.5 – 3 mm invertebrates might be relevant, such as foraging models investigating the growth of juvenile drift-feeding fishes, should consider using similar methods to quantify small invertebrate drift, lest they underestimate it by an order of magnitude.

Alaska↗

USGS2020

Book review: Proceedings of the First International Snakehead Symposium

Snakehead fishes (family Channidae) are among the most maligned aquatic invasive species in the USA and some other countries where they have been introduced outside of their native range in Asia and Africa. Nevertheless, snakeheads continue to be widely exploited in the live‐food trade in aquaculture and wild‐capture fisheries, are highly sought by anglers, and are also popular in the aquarium trade (Courtenay and Williams 2004). The Northern Snakehead Channa argus is the most widespread of the three channid species that are currently naturalized in the USA. This species has generated much concern and controversy, a situation that is partly fueled by sensational media coverage and B‐grade science fiction horror films, such as “Frankenfish,” “Snakehead Terror,” and “Snakehead Swamp.” Media reports of snakehead introductions are often replete with provocative terms, such as “vicious,” “villain,” “voracious,” “monster,” “diabolical,” and even “ecological Armageddon.” When snakeheads first appeared in natural waters of the USA, fisheries professionals became increasingly interested in their status. Established populations rapidly expanded in the mid‐Atlantic region and Arkansas, with scattered reports of introduced snakeheads from isolated locations in Hawaii, California, North Carolina, Florida, the Upper Midwest, and New England. In 2002, snakeheads were added to the list of injurious fishes under the Lacey Act, thereby prohibiting their importation or transport across state lines without a permit. This symposium was conceived by the editors and other concerned fisheries professionals of the Mississippi River Basin Panel on Aquatic Invasive Species. The mission of the symposium, held in Alexandria, Virginia, in July 2018, was to bring together experts on snakehead biology and ecology and to synthesize existing information into summary papers. In this book, 35 authors contributed to 15 peer‐reviewed articles that detail the current state of knowledge about snakehead introductions in the USA. Additionally, 16 abstracts are included from meeting presentations that were not accompanied by full‐length manuscripts. Also included is a summary of a facilitated symposium panel discussion featuring eight experts representing state and federal natural resource agencies and private fishing organizations. The book is organized into six sections. In the first section (Distribution), three papers provide an overview of the Channa species introduced into the USA and historical accounts of occurrence and dispersal of the Northern Snakehead in the mid‐Atlantic region and Arkansas. The second section (Biology/Ecology) consists of two articles that examine growth and energetics of Northern Snakehead populations and two papers that investigate diet, diel feeding activity, and movement of this species in the Potomac River drainage. The third section (Monitoring/Response) includes a paper that models range expansion of the Northern Snakehead in the southeastern USA based on occurrence data and environmental conditions. Also included in this section is a paper summarizing an environmental DNA study to assess the status and range of the Bullseye Snakehead C. marulius in southern Florida. The fourth section (Management/Control) is comprised of four papers that address harvest, age and growth, and development of a stock–recruitment model to inform management decisions regarding control and mitigation for Northern Snakehead populations in the greater Chesapeake Bay area. The fifth section (Perspectives) includes a paper on the history of snakehead introductions in Japan and a thought‐provoking social commentary on the human dimensions of Northern Snakehead management. Abstracts in the final section provide brief summaries of a diversity of snakehead studies, including aspects of distribution, ecology, behavior, control and monitoring efforts, public outreach, and pathology. The summary of the panel discussion is an engaging dialogue about the challenges of snakehead management in the context of conflicts regarding snakeheads as injurious versus their value as game and food species. Most of this book is focused on the Northern Snakehead. Much has been done to document snakehead distributions and certain aspects of snakehead biology, such as diets, age, and growth. Less research has been devoted to understanding the ecological impacts of snakeheads to native aquatic communities and ecosystems. This book would have benefited from a chapter summarizing the current systematics and diversity of the Channidae to inform fisheries biologists about the morphological characteristics of the family, approximate numbers of genera and species, and taxonomic instability. Exemplifying the latter, recent molecular and morphological evidence indicates uncertainty regarding identification of the feral snakehead population in Florida (Adamson and Britz 2019). Those authors suggest that this population may have originated from western Thailand, a possibility that could have implications for understanding historical pathways of snakehead introductions into the USA. In comparison with many published AFS symposia, this volume is relatively narrow in scope and lacks cohesive integration. It will primarily be of interest to those fisheries professionals engaged in the study of snakeheads as well as other nonnative species for which there are contrasting social values regarding their management: whether to monitor and attempt control or eradication efforts or to maintain populations for harvest as game or food species. The book should serve to identify information gaps and guide future research.

Transactions of the American Fisheries Society↗

USGS2018

Corresponding long-term shifts in stream temperature and invasive fish migration

By investigating historic trapping records of invasive sea lamprey ( Petromyzon mari nus) throughout tributaries to the Laurentian Great Lakes, we found that upstream spawning migration timing was highly correlated with stream temperatures over large spatial and temporal scales. Furthermore, several streams in our study exceeded a critical spring thermal threshold (i.e., 15°C) and experienced peak spawning migration up to 30 days earlier since the 1980s, whereas others were relatively unchanged. Streams exhibiting warming trends and earlier migration were spatially clustered and generally found on the leeward side of the Great Lakes where the lakes most affect local climate. These findings highlight that all streams are not equally impacted by climate change and represent, to our knowledge, the first observation linking long-term changes in stream temperatures to shifts in migration timing of an invasive fish. Earlier sea lamprey migration in Great Lakes tributaries may improve young of the year growth and survival, but not limit their spatial distribution, making sea lamprey control more challenging.

Laurentian Great Lakes↗

USGS2011

Analysis of dam-passage survival of yearling and subyearling Chinook salmon and juvenile steelhead at The Dalles Dam, Oregon, 2010

We performed a series of analyses of mark-recapture data from a study at The Dalles Dam during 2010 to determine if model assumptions for estimation of juvenile salmonid dam-passage survival were met and if results were similar to those using the University of Washington's newly developed ATLAS software. The study was conducted by the Pacific Northwest National Laboratory and used acoustic telemetry of yearling Chinook salmon, juvenile steelhead, and subyearling Chinook salmon released at three sites according to the new virtual/paired-release statistical model. This was the first field application of the new model, and the results were used to measure compliance with minimum survival standards set forth in a recent Biological Opinion. Our analyses indicated that most model assumptions were met. The fish groups mixed in time and space, and no euthanized tagged fish were detected. Estimates of reach-specific survival were similar in fish tagged by each of the six taggers during the spring, but not in the summer. Tagger effort was unevenly allocated temporally during tagging of subyearling Chinook salmon in the summer; the difference in survival estimates among taggers was more likely a result of a temporal trend in actual survival than of tagger effects. The reach-specific survival of fish released at the three sites was not equal in the reaches they had in common for juvenile steelhead or subyearling Chinook salmon, violating one model assumption. This violation did not affect the estimate of dam-passage survival, because data from the common reaches were not used in its calculation. Contrary to expectation, precision of survival estimates was not improved by using the most parsimonious model of recapture probabilities instead of the fully parameterized model. Adjusting survival estimates for differences in fish travel times and tag lives increased the dam-passage survival estimate for yearling Chinook salmon by 0.0001 and for juvenile steelhead by 0.0004. The estimate was unchanged for subyearling Chinook salmon. The tag-life-adjusted dam-passage survival estimates from our analyses were 0.9641 (standard error [SE] 0.0096) for yearling Chinook salmon, 0.9534 (SE 0.0097) for juvenile steelhead, and 0.9404 (SE 0.0091) for subyearling Chinook salmon. These were within 0.0001 of estimates made by the University of Washington using the ATLAS software. Contrary to the intent of the virtual/paired-release model to adjust estimates of the paired-release model downward in order to account for differential handling mortality rates between release groups, random variation in survival estimates may result in an upward adjustment of survival relative to estimates from the paired-release model. Further investigation of this property of the virtual/paired-release model likely would prove beneficial. In addition, we suggest that differential selective pressures near release sites of the two control groups could bias estimates of dam-passage survival from the virtual/paired-release model.

Open-File Report↗