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USGS1975

Some effects of pollutants in terrestrial ecosystems

Summary: Pollutants tend to simplify plant and animal communities by causing a progressive loss of species. At the extreme, this leads to erosion and loss of soil fertility. Weedy, broadly adapted species increase. Among animals, carnivorous species and groups are often the first to suffer. This is partly because of their exposure at the top of the food chain, and partly, it appears, because of physiological differences. Species differences in susceptibility are abundant and are often critical. One result is that when one pest is controlled another is likely to flare up. Resistance appears commonly in insects and is known in other fast-breeding forms, including fishes, frogs, and rodents. Resistant individuals can carry toxicant loads that make them dangerous food for other animals. Some groups, including mollusks and annelids, are naturally resistant to many organohalogens and tend to accumulate them. Animals such as birds may carry lipophilic pollutants in large amounts with apparent safety until forced to draw upon their fat. They may then suffer delayed mortality, and no doubt suffer reproductive or behavioral effects at sublethal levels. Lipophilic pollutants in the brain rise when body lipids decrease and fall when body lipids increase. Mutagenesis can be caused by some common pollutants and the mutagenic properties of most chemicals are far too little known. Fortunately, common pesticides are not likely to be strong mutagens. Mutagenicity may be affecting certain long-lived and slow-breeding species in the wild, but most species have enough population turnover to swamp an occasional mutagenic event. Behavioral changes can be caused by relatively low levels of contaminants, but it is often hard to demonstrate them without using high dosages. Reproduction may or may not be affected adversely by low exposures. At certain exposures that are below the toxic levels of a chemical, a biostimulatory effect is to be expected. Food chain accumulations definitely do occur when persistent chemicals enter organisms that eliminate them poorly. However, loss of chemicals in the food chain must be more common than accumulation. The great concentration from water to aquatic organism is chiefly a physical phenomenon, not a food chain effect, but it affords high starting levels for these chains. Terrestrial food chains often start at a high level with heavily contaminated, struggling prey. Litter feeders are another important base. Vegetation may be contaminated enough to be dangerous to animals that eat it. Dermal and respiratory routes of intoxication occur in the wild, but the oral route is far more important at most times and places. The organisms that govern soil fertility and texture are affected more by cultivation than by pesticides. Above ground, growing knowledge of resistance, species differences, and biological controls is leading to integrated control, in which use of chemicals is limited and specific. We do not know what is happening to most nontarget invertebrates. Amphibians and reptiles may be killed by applications of insecticides, but are not highly sensitive and can carry large residues. Effects of these residues on reproduction are little known. Heavy kills of birds by pesticides still occur in the field. Fish-eating and bird-eating birds also undergo shell thinning and related reproductive troubles in many areas, sometimes to the point of population decline and local or regional extermination. DDE most often correlates with shell thinning in the wild and in experiments. No other known chemical approaches DDE in causing severe and lasting shell thinning. Herbivorous birds seem to be largely immune to this effect. It is uncertain how much dieldrin and PCBs contribute to embryotoxicity in carnivorous birds. Mammals may be killed by the more toxic pesticides, but some of the commonest small rodents are so resistant, and lose their residues so rapidly, that they are of little

Book chapter↗

USGS2012

The FOBIMO (FOraminiferal BIo-MOnitoring) initiative—Towards a standardised protocol for soft-bottom benthic foraminiferal monitoring studies

The European Community Marine Strategy Framework Directive (MSFD) was established to provide guidelines for monitoring the quality of marine ecosystems. Monitoring the status of marine environments is traditionally based on macrofauna surveys, for which standardised methods have been established. Benthic foraminifera are also good indicators of environmental status because of their fast turnover rates, high degree of specialisation, and the preservation of dead assemblages in the fossil record. In spite of the growing interest in foraminiferal bio-monitoring during the last decades, no standardised methodology has been proposed until today. The aim of the FOraminiferal BIo-MOnitoring (FOBIMO) expert workshop, held in June 2011 at Fribourg, Switzerland, which assembled 37 scientists from 24 research groups and 13 countries, was to develop a suite of standard methods. This paper presents the main outcome of the workshop, a list of motivated recommendations with respect to sampling devices, sample storage, treatment, faunal analysis and documentation. Our recommendations fulfil the criteria imposed both by scientific rigour and by the practical limitations of routine studies. Hence, our aim is to standardise methodologies used in bio-monitoring only and not to limit the use of different methods in pure scientific studies. Unless otherwise stated, all recommendations concern living (stained) benthic foraminiferal assemblages. We have chosen to propose two types of recommendations. Mandatory recommendations have to be followed if a study wants to qualify as sound and compatible to the norms. The most important of these recommendations are the interval from 0 to 1 cm below the sediment surface has to be sampled, and an interface corer or box corer that keeps the sediment surface intact is to be used for offshore surveys. A grab sampler must not be deployed in soft sediments. Three replicate samples are to be taken and analysed separately. Samples are to be washed on a 63-μm screen, and the living benthic foraminiferal fauna of the > 125 μm fraction is to be analysed. Splits are to be picked and counted entirely, and all counted foraminifera from at least one replicate per station have to be stored in micropalaeontological slides. Census data, supplementary laboratory data and microslides have to be archived. Advisory recommendations are to sample in autumn, to have a sample size of 50 cm 2 or a tube of 8 cm inner diameter, to use > 70% ethanol as a preservative, rose Bengal at a concentration of 2 grams per litre for staining, and a staining time of at least 14 days. The split size should be defined by a target value of 300 specimens, heavy liquid separation should be avoided, and the 63–125 μm fraction or deeper sediment levels may be considered in some environments. We are convinced that the application of this protocol by a large number of scientists is a necessary first step to a general acceptance of benthic foraminifera as a reliable tool in bio-monitoring studies.

Marine Micropaleontology↗

USGS2010

Do three massive coral species from the same reef record the same SST signal? A test from the Dry Tortugas, Florida Keys

Paleoclimatologists have reconstructed century-long records of sea surface temperature (SST) in the Pacific using the Sr/Ca of massive corals, whereas similar reconstructions in the Atlantic have not proceeded at the same pace. Past research in the Florida Keys has focused on Montastrea spp. , an abundant and fast-growing massive coral, thus a good candidate for climate reconstructions. However, coral records from the Florida Keys are complicated by freshwater flux, which varies the Sr/Ca in seawater, thus confounding the Sr/Ca to SST signal. In this research, we compared the monthly Sr/Ca variations in three massive corals species ( Montastraea faveolata, Diploria strigosa, and Siderastrea siderea ) from the same reef in the nearly pristine Dry Tortugas National Park (24.70N, 82.80W) at the southwestern extent of the Florida Keys. This location is ideal for a calibration study as hourly water temperature records are available and the remote reef is far from mainland freshwater influence. These corals experienced the same environmental conditions (water depth, clarity, Sr/Ca of seawater, etc.) but differ in the mean annual growth rates (0.86 ±0.10 (1σ) cm/year M. faveolata ; 0.67 ±0.04 (1σ) cm/year D. strigosa ; 0.44 ±0.04 (1σ) cm/year S. siderea ). The mean Sr/Ca values are not the same but decrease with mean annual growth rates (9.201 ±0.091 (1σ) mmol/mol M. faveolata ; 9.177 ±0.081 (1σ) mmol/mol D. strigosa ; 8.964 ±0.12 (1σ) mmol/mol S. siderea ), thus supporting the “vital effect” or biological differences during calcification between coral species. The amplitude of the seasonal cycle in Sr/Ca varies with the slower growing S. siderea having the largest mean amplitude and D. strigosa the smallest (0.340 mmol/mol S. siderea ; 0.284 mmol/mol M. faveolata ; 0.238 mmol/mol D. strigosa ). We confirmed our sampling methods by conducting several intracolony and intercolony coral Sr/Ca replication tests and found a high correlation in all tests (>0.95 S. siderea ; >0.90 D. strigosa ; >0.83 M. faveolata; p < 0.05). The weighted linear regression of monthly coral Sr/Ca to mean monthly SST revealed that S. siderea captured the seasonal and interannual variability in SST ( r = -0.97, -0.61 monthly and monthly anomalies, respectively, p < 0.05). The other corals have reduced correlation with monthly anomalies and do not capture the seasonal variability with the same fidelity as S. siderea . All three corals were sampled along the thecal wall following the same procedures; however, each coral species has a different skeletal structure, density, and micro-scale growth patterns. We hypothesize the thecal wall of S. siderea calcifies at a continuous rate along the time-growth axis whereas the wall of D. strigosa and M. faveolata reflects a more complex signal. Of the three species, the slow growing S. siderea provides a robust reconstruction of mean monthly SST for the Dry Tortugas thus suitable for longer centennial-scale reconstructions.

Florida↗

USGS2013

Hydraulic and water-quality data collection for the investigation of Great Lakes tributaries for Asian carp spawning and egg-transport suitability

If the invasive Asian carps (bighead carp Hypophthalmichthys nobilis and silver carp Hypophthalmichthys molitrix ) migrate to the Great Lakes, in spite of the efforts to stop their advancement, these species will require the fast-flowing water of the Great Lakes tributaries for spawning and recruitment in order to establish a growing population. Two Lake Michigan tributaries (the Milwaukee and St. Joseph Rivers) and two Lake Erie tributaries (the Maumee and Sandusky Rivers) were investigated to determine if these tributaries possess the hydraulic and water-quality characteristics to allow successful spawning of Asian carps. To examine this issue, standard U.S. Geological Survey sampling protocols and instrumentation for discharge and water-quality measurements were used, together with differential global positioning system data for georeferencing. Non-standard data-processing techniques, combined with detailed laboratory analysis of Asian carp egg characteristics, allowed an assessment of the transport capabilities of each of these four tributaries. This assessment is based solely on analysis of observed data and did not utilize the collected data for detailed transport modeling. All four tributaries exhibited potential settling zones for Asian carp eggs both within the estuaries and river mouths and within the lower 100 kilometers (km) of the river. Dams played a leading role in defining these settling zones, with the exception of dams on the Sandusky River. The impoundments created by many of the larger dams on these rivers acted to sufficiently decelerate the flows and allowed the shear velocity to drop below the settling velocity for Asian carp eggs, which would allow the eggs to fall out of suspension and settle on the bottom where it is thought the eggs would perish. While three rivers exhibited these settling zones upstream of the larger dams, not all settling zones are likely to have such effects on egg transport. The Milwaukee River exhibited only a short settling zone upstream of the Grafton Dam, whereas the St. Joseph and Maumee Rivers both had extensive settling zones (>5 km) behind major dams. These longer settling zones are likely to capture more eggs than shorter settling reaches. All four rivers exhibited settling zones at their river mouths, with the Lake Erie tributaries having much larger settling zones extending more than 10 km up the tributaries. While hydraulic data from all four rivers indicated settling of eggs is possible in some locations, all four rivers also exhibited sufficient temperatures, water-quality characteristics, turbulence, and transport times outside of settling zones for successful suspension and development of Asian carp eggs to the hatching stage before the threat of settlement. These observed data indicate that these four Great Lakes tributaries have sufficient hydraulic and water-quality characteristics to support successful spawning and recruitment of Asian carps. The data indicate that with the right temperature and flow conditions, river reaches as short as 25 km may allow Asian carp eggs sufficient time to develop to hatching. Additionally, examining the relation between critical shear velocity and mean velocity, egg settling appears to take place at mean velocities in the range of 15–25 centimeters per second, a much lower value than is generally cited in the literature. A first-order estimate of the minimum transport velocity for Asian carp eggs in a river can be obtained by using mean flow depth and river substrate data, and curves were constructed to show this relation. These findings would expand the number of possible tributaries suitable for Asian carp spawning and contribute to the understanding of how hydraulic and water-quality information can be used to screen additional rivers in the future.

Great Lakes↗

USGS2013

Borehole-explosion and air-gun data acquired in the 2011 Salton Seismic Imaging Project (SSIP), southern California: description of the survey

The Imperial and Coachella Valleys are being formed by active plate-tectonic processes. From the Imperial Valley southward into the Gulf of California, plate motions are rifting the continent apart. In the Coachella Valley, the plates are sliding past one another along the San Andreas and related faults (fig. 1). These processes build the stunning landscapes of the region, but also produce damaging earthquakes. Rupture of the southern section of the San Andreas Fault (SAF), from the Coachella Valley to the Mojave Desert, is believed to be the greatest natural hazard that California will face in the near future. With an estimated magnitude between 7.2 and 8.1, such an event would result in violent shaking, loss of life, and disruption of infrastructure (freeways, aqueducts, power, petroleum, and communication lines) that might bring much of southern California to a standstill. As part of the nation’s efforts to avert a catastrophe of this magnitude, a number of projects have been undertaken to more fully understand and mitigate the effects of such an event. The Salton Seismic Imaging Project (SSIP), funded jointly by the National Science Foundation (NSF) and the U.S. Geological Survey (USGS), seeks to understand, through seismic imaging, the structure of the Earth surrounding the SAF, including the sedimentary basins on which cities are built. The principal investigators (PIs) of this collaborative project represent the USGS, Virginia Polytechnic Institute and State University (Virginia Tech), California Institute of Technology (Caltech), Scripps Institution of Oceanography (Scripps), University of Nevada, Reno (UNR), and Stanford University. SSIP will create images of underground structure and sediments in the Imperial and Coachella Valleys and adjacent mountain ranges to investigate the earthquake hazards posed to cities in this area. Importantly, the images will help determine the underground geometry of the SAF, how deep the sediments are, and how fast earthquake energy can travel through the sediments. All of these factors determine how hard the earth will shake during a major earthquake. If we can improve on our understanding of how and where earthquakes will occur, and how strong their resultant shaking will be, then buildings can be designed or retrofitted accordingly in order to resist damage and collapse, and emergency plans can be adequately prepared. In addition, SSIP will investigate the processes of rifting and magmatism in the Salton Trough in order to better understand this important plate-boundary region. The Salton Trough is a unique rift in that subsidence is accompanied by huge influxes of infilling sediment from the Colorado River. Volcanism that accompanies the subsidence here is muted by these influxes of sediment. The Salton Trough, in the central part of the Imperial Valley, is apparently made up of entirely new crust: young sediment in the upper crust and basaltic intrusive rocks in the mid-to-lower crust (Fuis and others, 1984). Similar to the ultrasound and computed tomography (CT) scans performed by the medical industry, seismic imaging is a collection of techniques that enable scientists to obtain a picture of what is underground. The petroleum industry routinely uses these techniques to search for oil and gas at relatively shallow depths; however, the scope of this project demanded that we image as much as 30 km into the Earth’s crust. This project generated and recorded seismic waves, similar to sound waves, which move downward into the Earth and are bent (refracted) or echoed (reflected) back to the surface. SSIP acquired data in a series of intersecting lines that cover key areas of the Salton Trough. The sources of sound waves were detonations (shots) in deep boreholes, designed to create energy equivalent to magnitude 1–2 earthquakes. The study region routinely experiences earthquakes of these magnitudes, but earthquakes are not located in such a way as to permit us to create the detailed images we need for earthquake hazard assessment. Air gun bursts, generated in the Salton Sea along extensions of our onshore seismic lines, also were utilized as sound-wave sources. Temporary deployments of portable land seismometers, as well as ocean-bottom seismometers (OBSs) on the floor of the Salton Sea, recorded the energy from the land shots and air gun bursts. SSIP is similar to the Los Angeles Regional Seismic Experiments of 1994 and 1999 (LARSE I and II, respectively; Murphy and others, 1996; Fuis and others, 2001). The LARSE surveys demonstrated that the USGS and collaborators can safely and effectively conduct seismic imaging surveys in urban and nonurban areas, on lands owned and/or managed by many different types of agencies and entities. Information was produced that could not have been obtained any other way, and this information was key to changing the leading ideas about earthquake hazards at that time in the Los Angeles region. These surveys produced no significant environmental impact or damage to structures, and they did not trigger earthquakes.

California↗

USGS2013

Snake River fall Chinook salmon life history investigations: Annual report 2011 (April 2011 - March 2012)

Executive Summary Chapter One – This chapter was published in the Transactions of the American Fisheries Society in 2012. We conducted a three-year radiotelemetry study in the lower Snake River to answer the questions: do fall Chinook salmon juveniles pass dams during winter when bypass systems and structures designed to prevent mortality are not operated; does downstream movement rate vary annually, seasonally, and from reservoir to reservoir; and, what are some of the factors that contribute to annual, seasonal, and spatial variation in downstream movement rate? Fall Chinook salmon juveniles moved downstream up to 169 km and fast enough (7.5 km/d) such that large percentages (up to 93%) of the fish passed one or more dams during winter. Mean downstream movement rate varied annually (9.2-11.3 km/d), increased from winter (7.5 km/d) to spring (16.4 km/d), and increased (6.9-16.8 km/d) as fish moved downstream from reservoir to reservoir. Fish condition factor at tagging explained some of the annual variation ( P ≤ 0.01) in downstream movement rate, whereas water particle velocity ( P ≤0.0001) and temperature ( P ≤0.0001) explained portions of the seasonal variation. An increase in migrational disposition as fish moved downstream helped explain the spatial variation ( P =0.05-0.07). The potential cost of winter movement might be reduced survival due to turbine passage when the bypass systems and spillway passage structures are not operated. Efforts to understand and increase passage survival of winter migrants in large impoundments might help to rehabilitate some imperiled anadromous salmonid populations. Chapter Two – Natural juvenile fall Chinook salmon in the Snake and Clearwater rivers exhibit two life history strategies. “Ocean-type” fish migrate out to the ocean in their first summer of life as subyearlings, but “reservoir-type” fish delay seaward migration during the summer, and some overwinter in reservoirs before continuing their migration the following spring as yearlings. Earlier emerging fish produced in the Snake River tend to adopt the ocean-type life history whereas many of the later emerging fish from the Clearwater River tend to adopt the reservoirtype life history. The underlying cause of the reservoir-type life history is poorly understood, but we believe there may be link to physiological development. We used traditional markers of the parr-smolt transformation (smoltification), including gill Na + /K + -ATPase activity and thyroid hormone levels, along with gene expression microarrays to assess the development of ocean-type juvenile fall Chinook salmon and then compared it to that of juvenile fall Chinook salmon from the Clearwater River. We showed that parr in the Snake River are physiologically distinct from actively-migrating smolts but smolts migrating early and late in the summer and fall are physiologically similar. Juvenile fall Chinook salmon collected from the Clearwater River were similar in size to early-migrating smolts in the Snake River but were most physiologically similar to Snake River parr. Genes differentially expressed between Snake River parr and smolts and between fish from the Clearwater River and smolts from the Snake River were involved in the cell cycle, steroid metabolism and other metabolic pathways, and DNA repair and packaging. Many of the genes differentially expressed in these comparisons had expression patterns that correlated with gill Na + /K + -ATPase activity, suggesting that they were related to smoltification and migration status. Chapter Three – Natural subyearlings produced in the Clearwater River are exposed to cool (~10-12°C) temperatures when water is released from Dworshak Reservoir for summer flow augmentation. Total dissolved gas (TDG) levels range from 100-110% in the lower Clearwater iv River. When fish move into the Snake River, they encounter temperatures up to 24°C at the surface which have the potential to incur gas bubble disease (GBD) in fish as dissolved gases in their bodies expand under warmer temperatures. This may result in both direct and indirect mortality, but this situation has been little studied. We conducted laboratory experiments to examine subyearling mortality rates and incidence and severity of GBD in fish that were moved between waters that varied in TDG and temperature. Fish experienced significant mortality only at temperatures of 25°C, which increased with exposure time. However there was no significance difference in mortality between fish acclimated to 100% TDG and 110% TDG. Fish that died did show signs of GBD. Generally, signs of GBD such as bubbles in the lateral line and unpaired fins were higher in fish acclimated at 110% TDG than in fish acclimated at 100% TDG, but there were few trends related to exposure temperature. Field measurements of TDG showed that TDG ranged from about 100% to 122.5% at some locations. Generally, TDG fluctuated daily, up to 8% during August and early September, and was highest late in the afternoon and lowest in the early morning. Laboratory results and field monitoring demonstrated that emigrating juvenile salmon can potentially be at risk from elevated temperatures, TDG, and GBD albeit to an unknown extent, which may increase their vulnerability to predation. Chapter Four – We conducted monthly beam trawling in Lower Granite and Little Goose reservoirs to describe the seasonal abundance of benthic epifauna that are potentially important as prey to juvenile fall Chinook salmon. The predominant taxa collected were Siberian prawns, the opossum shrimp Neomysis mercedis , and the amphipod Corophium sp. Prawns were relatively abundant at shallow sites in both reservoirs in June, but were more abundant at deep sites in lower and middle reservoir reaches in autumn. Prawn densities were commonly <0.2/m2. Prawn length-frequency data indicated that there were at least two size classes. Juvenile prawns present in shallow water more often than adult prawns, which were generally only found in deep water by autumn. Ovigerous prawns had an average of 171 eggs, which represented about 11.5% of their body weight. Limited diet analyses suggested that prawns consumed Corophium , Neomysis , and aquatic insects. Neomysis dominated all catches both in terms of abundance and biomass, and they were more abundant in Lower Granite compared to Little Goose reservoir. Neomysis were more abundant at shallow sites than at deep sites. Corophium were present in our collections but were never abundant, probably because our trawl was not effective at capturing them. The caloric content of prawns (4,782 Kcal), Neomysis (4,962 Kcal), and Corophium (4,926 Kcal) indicates that these prey would be energetically profitable for juvenile salmon. Subyearling fall Chinook salmon prey heavily on Neomysis and Corophium at times, but the importance of prawns as prey is uncertain.

Oregon, Washington↗

USGS2026

Treatability study to evaluate bioremediation of trichloroethene at Site K, former Twin Cities Army Ammunition Plant, Arden Hills, Minnesota, 2020–22

Executive Summary Chlorinated solvents, including trichloroethene (TCE) and other chlorinated volatile organic compounds (cVOCs), are widespread contaminants that can be treated by bioremediation approaches that enhance anaerobic reductive dechlorination. Reductive dechlorination can be enhanced either through the addition of an electron donor (biostimulation) or the addition of a known dechlorinating culture (bioaugmentation) along with an electron donor. Although bioremediation has been applied at many TCE-contaminated groundwater sites, application in source zones at sites where residual dense nonaqueous phase liquid (DNAPL) is present is more limited. In this study, laboratory and field treatability tests were completed to evaluate the potential application of anaerobic bioremediation for a shallow groundwater plume containing TCE in a perched alluvial aquifer at Site K, former Twin Cities Army Ammunition Plant, Arden Hills, Minnesota, which was on the National Priorities List as the New Brighton/Arden Hills Superfund site until 2019. In addition to the presence of residual DNAPL at the site, temporal variability in groundwater flow directions and input of oxygenated recharge were possible complicating factors for the application of enhanced anaerobic biodegradation in the shallow plume. The Site K plume extends beneath the footprint of Building 103, which was demolished in 2006, and soil excavations to a maximum depth of 6 feet (ft) below ground surface in 2014 were known to leave some deeper contaminated soil in place in the TCE source area. Groundwater treatment at the site, formalized as part of the 1997 Record of Decision, has been in operation since 1986 and consists of an extraction trench at the downgradient edge of the plume to collect groundwater, which is then pumped to an on-site air stripper. Groundwater concentrations in the plume have been relatively stable since treatment began, indicating a continued source of TCE in the aquifer. The desire for a destructive remedy that would enhance the removal of cVOCs in the aquifer at Site K and shorten the remediation timeframe led the U.S. Army to request that the U.S. Geological Survey conduct a groundwater treatability study to assess bioremediation. This report describes the U.S. Geological Survey bioremediation treatability study conducted during 2020–22, including pre-design site characterization to assist in formulating the bioremediation approach, laboratory experiments to support the design of the field pilot test, and implementation and 1-year performance monitoring results for the pilot test. Pre-design site characterization included the collection of soil cores for cVOC analysis and lithologic descriptions and the re-installment of three wells to obtain hydrologic measurements and initial groundwater chemistry. Relatively flat head gradients were measured at the site, and substantial decreases in water-level elevations occurred from spring to summer (May–July 2021). Continuous water-level monitoring indicated a rapid response to precipitation. Groundwater flow velocities were consistently less than 0.5 foot per day, and the pilot bioremediation test was therefore designed with short lateral distances (about 5 ft) between injection and individual monitoring points. Soil analyses confirmed that high volatile organic compound contamination was left in place in the source area. The highest concentrations were near or in clay at the base of the perched aquifer. Concentrations of cVOCs measured in the replaced wells were consistent with historical data and had a maximum TCE concentration of 57,700 micrograms per liter (μg/L), indicative of nearby residual DNAPL based on the general rule of observed concentrations exceeding 1 percent of solubility. The primary TCE daughter product detected was 1,2-cis-dichloroethene (cisDCE), which indicated limited reductive dechlorination in the plume. Groundwater in both the source and downgradient areas was relatively reducing during the pre-design characterization, particularly in the source area where methane concentrations greater than 400 μg/L were measured. Initial laboratory tests conducted using native aquifer microorganisms from the three replacement wells showed that anaerobic TCE biodegradation rates were low when biostimulated with the addition of sodium lactate as an electron donor, also known as a carbon donor, and resulted in the production of only cisDCE. Addition of a known dechlorinating culture, WBC-2, however, resulted in rapid biodegradation and production of ethene, verifying complete reductive dechlorination of TCE. Microcosms constructed with aquifer soil collected from the site were used to evaluate other electron donors besides lactate to support reductive dechlorination by WBC-2, including corn syrup as an alternative fast-release compound and whey, soy-based vegetable oil, and 3-D Microemulsion (Regenesis, San Clemente, California) as slow-release compounds. First-order rate constants for total organic chlorine removal in these WBC-2 amended microcosms were greatest with either lactate or vegetable oil as the donor, ranging between 0.061 and 0.047 per day or corresponding half-lives of 11–15 days. Testing of commercial products in other WBC-2-bioaugmented microcosms led to selection for the field pilot test of an emulsified vegetable oil product that also contained some sodium lactate as a fast-release donor. Delaying the addition of WBC-2 relative to the donor in the microcosms resulted in the most rapid overall biodegradation rates. The selected design for the pilot test utilized three separate test plots, each about 30-ft wide and 60-ft long: plots GS1 and GS2 in the source area of the plume and plot GS3 in the downgradient area of the plume near the excavation trench. Each test plot had one injection well, one monitoring well upgradient from the injection point, and 12 surrounding monitoring wells in a grid to capture variable groundwater flow directions. Donor injections, which included a bromide tracer, were completed in October 2021, immediately following baseline sampling, and the WBC-2 culture was injected about 40 days later, between November 30 and December 2, 2021. Performance monitoring conducted until December 2022 included hydrologic measurements and analyses of cVOCs, redox-sensitive constituents, dissolved organic carbon, bromide, volatile fatty acids, compound-specific carbon isotopes, and microbial communities. The biogeochemical data collected during the pilot tests in the three treatment plots showed that enhanced, complete reductive dechlorination of cVOCs in the groundwater was achieved in the GS1 and GS3 plots. In contrast, evidence of distribution of the injected amendments and subsequent biodegradation was limited in GS2, which was in an area of more heterogeneous soil lithology and low water table elevations. The molar composition of volatile organic compounds in the GS1 and GS3 plots was dominated by ethene in wells that were reached by the injected amendments by the end of the monitoring period. In the GS1 and GS3 plots, similar patterns were observed of cVOC concentrations decreasing to near detection levels, or below, at some wells sampled in July and October 2022, whereas ethene became dominant and indicated sustained complete reductive dechlorination. Baseline cVOC concentrations were more than a factor of 10 higher in the groundwater in the GS1 plot than in GS3, but no apparent inhibition of complete dechlorination occurred. As expected from the initial pre-design site data and the laboratory experiments, enhanced dissolution of residual DNAPL coupled to biodegradation was evident in the GS1 plot, where a marked increase in dichloroethene (DCE) above the initial baseline and upgradient TCE and DCE concentrations occurred. DCE concentrations subsequently declined where DNAPL dissolution was evident, concurrent with production of vinyl chloride and then predominantly ethene. Thus, overall biodegradation rates outpaced the DNAPL dissolution and desorption and DCE production in the source area. This success in complete degradation to predominantly ethene was achieved even in areas where the DCE concentrations reached a maximum of about 30,000 μg/L. Compound specific isotope analysis of carbon in TCE, cisDCE, trans-1,2-dichloroethene, and vinyl chloride was conducted to provide another line of evidence of the occurrence and extent of anaerobic biodegradation. Along a flow path in each plot that was affected by the injected amendments, carbon isotopes in the TCE and daughter cVOCs in the groundwater became isotopically heavier, indicating biodegradation. Enhanced biodegradation rates calculated from the field tests in GS1 and GS3 showed half-lives of 36.9–75.3 days for DCE degradation and 9.48–38.5 days for ethene production. Notably, these ethene production rates calculated from the field tests are consistent with the results of WBC-2-bioaugmented microcosms amended with either lactate or vegetable oil, which had half-lives for total organic chlorine removal that ranged from 11 to 15 days. These rates indicated rapid enhanced biodegradation, which is promising for application of a full-scale bioremediation remedy. Ultimately, however, the mass of residual or sorbed TCE in the aquifer that remains accessible for dissolution and biodegradation would likely control the time required for a full-scale bioremediation effort to achieve performance goals for TCE and cisDCE specified in the Record of Decision for Site K. The field pilot tests showed that the relatively low hydraulic head gradients and temporal changes in groundwater flow directions in the shallow aquifer would add complexity to a full-scale bioremediation effort. The radius of influence (ROI) at GS1 and GS3 (16.3 ft and 12.7 ft, respectively) were close to the design ROI of 15 ft. The estimated ROI at GS2 was about four times the design ROI, but may be less reliable at this location owing to groundwater flow direction. In addition, the low temperatures following WBC-2 injection in late November to early December 2021, in combination with the low hydraulic head gradients, were probably major factors in the delay observed before the onset of enhanced biodegradation following injection of the culture. Additional test injections could be beneficial to optimize the timing of donor and culture injections with the variable temperatures and hydraulic head in the shallow aquifer.

Minnesota↗

USGS2011

Simulations of groundwater flow and particle-tracking analysis in the zone of contribution to a public-supply well in San Antonio, Texas

In 2006, a public-supply well in San Antonio, Texas, was selected for intensive study to assess the vulnerability of public-supply wells in the Edwards aquifer to contamination by a variety of compounds. A local-scale, steady-state, three-dimensional numerical groundwater-flow model was developed and used in this study to evaluate the movement of water and solutes from recharge areas to the selected public-supply well. Particle tracking was used to compute flow paths and advective traveltimes throughout the model area and to delineate the areas contributing recharge and zone of contribution for the selected public-supply well. The local-scale model grid has a finer vertical discretization than do previous regional Edwards aquifer models and incorporates refined parameter zones corresponding with multiple (10) hydrogeologic units representing the Edwards aquifer. In the Edwards aquifer, high matrix porosity and permeability likely are overshadowed by high permeability developed in structurally influenced karstic conduit systems that transmit water into, through, and out of the aquifer system. The complexity of the aquifer system in the local-scale study area is further increased by numerous faults with varying vertical displacements. The extensive faulting results in the juxtaposition of hydrogeologic units with differing hydraulic properties and has appreciable effects on groundwater flow in the Edwards aquifer. The local-scale model simulations use the MODFLOW Hydrogeologic-Unit Flow Package and include two hydrogeologic units with high hydraulic conductivities (one or more orders of magnitude higher than for the other simulated hydrogeologic units) that are intended to simulate fast flow paths attributable to karst features. The two “conduit” hydrogeologic units of the Edwards aquifer represent the lower 8 meters of the leached and collapsed members and the Kirschberg evaporite member of the Edwards Group. The MODFLOW Horizontal-Flow Barrier Package was used to simulate faults in the local-scale model. The assumption was made that the degree to which a fault acts as a barrier to groundwater flow is proportional to the fault displacement. The final calibrated hydraulic-conductance values ranged from 0.01 to 0.2 per day for fault displacements ranging from 0 to more than 100 percent of the total aquifer thickness. The calibrated steady-state simulation generally reproduces the spatial distribution of measured water-level altitudes. Simulated water-level altitudes were within 9.0 meters of measured water-level altitudes at 74 of the 84 wells used as targets for the local-scale model for the calibrated steady-state simulation. The overall mean absolute difference between simulated and measured water-level altitudes is 4.2 meters, and the mean algebraic difference is 1.9 meters. The simulated springflow for San Antonio Springs was 7.7 percent greater and for San Pedro Springs was 4.2 percent less than the median measured springflow. Simulated tritium concentrations were within 0.14 tritium units of measured tritium concentrations for 11 of the 13 local-scale study tritium observations from the 10 local-scale study wells used to calibrate the steady-state local-scale model, with a mean absolute difference between simulated and measured tritium concentrations of 0.11 tritium units and a mean algebraic difference of -0.04 tritium units. Simulated tritium concentrations in the selected public-supply well during November 2007 were within 0.09 tritium units of the measured concentrations, with the exception of the shallowest observation from the well. The steady-state simulation water budget indicates that recharge occurring in the local-scale study area accounts for 31.8 percent of the sources of water to the Edwards aquifer in the local-scale model area and that inflow through the model boundaries contributes 68.2 percent. Most of the flow into the local-scale model area through the model boundaries occurs through the western and southern boundaries, 58.2 and 39.6 percent, respectively. The largest discharges from the Edwards aquifer in the local-scale model area are boundary outflow (71.4 percent) and withdrawals by wells (24.9 percent). Most of the flow out of the local-scale model area through the model boundaries occurs through the southern and eastern boundaries, 54.2 and 39.6 percent, respectively. The simulated zones of contribution for the selected public-supply well, Timberhill well nest, and Zarzamora well nest extend to the north, northeast, and northwest from each site in the confined zone of the aquifer into the recharge zone, where all recharge to the aquifer occurs. The area contributing recharge for the selected public-supply well has the greatest extent. The area contributing recharge for the Timberhill well nest encompasses approximately the western one-half of the area contributing recharge for the selected public-supply well, and that for the Zarzamora well nest encompasses approximately the eastern two-thirds of the area contributing recharge for the selected public-supply well. Simulated particle ages ranged from less than 1 day to more than 1,900 years in the 10 local-scale study wells (13 local-scale study tritium observations) used to calibrate the local-scale model. The simulated mean particle ages for the tritium observations representing selected well depths (shallow, intermediate, and deep) ranged from 2.5 to 15 years. The minimum (youngest) mean particle ages for the selected public-supply well and the Timberhill monitoring wells were for the intermediate well depth, while the youngest mean particle age for the Zarzamora monitoring wells was for the intermediate and deep well depth. The maximum (oldest) mean particle ages for the selected public-supply well and the Zarzamora monitoring wells were for the shallow well depth. The mean of simulated particle ages for tritium observations representing well depths open to the simulated conduit hydrogeologic units was 3.8 years, whereas the mean of simulated particle ages for tritium observations representing well depths not open to the simulated conduit hydrogeologic units was 9.6 years. The effect of short-circuit pathways, for example karst conduits, in the flow system on the movement of young water to the selected public-supply well could greatly alter contaminant arrival times compared to what might be expected from advection in a system without short circuiting. In a forecasting exercise, the simulated concentrations showed rapid initial response at the beginning and end of chemical input, followed by more gradual response as older water moved through the system. The nature of karst groundwater flow, where flow predominantly occurs via conduit flow paths, could lead to relatively rapid water quality responses to land-use changes. Results from the forecasting exercise indicate that timescales for change in the quality of water from the selected public-supply well could be on the order of a few years to decades for land-use changes that occur over days to decades, which has implications for source-water protection strategies that rely on land-use change to achieve water-quality objectives.

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USGS2017

Water quality and quantity and simulated surface-water and groundwater flow in the Laurel Hill Creek Basin, southwestern Pennsylvania, 1991–2007

Laurel Hill Creek is considered one of the most pristine waterways in southwestern Pennsylvania and has high recreational value as a high-quality cold-water fishery; however, the upper parts of the basin have documented water-quality impairments. Groundwater and surface water are withdrawn for public water supply and the basin has been identified as a Critical Water Planning Area (CWPA) under the State Water Plan. The U.S. Geological Survey, in cooperation with the Somerset County Conservation District, collected data and developed modeling tools to support the assessment of water-quality and water-quantity issues for a basin designated as a CWPA. Streams, springs, and groundwater wells were sampled for water quality in 2007. Streamflows were measured concurrent with water-quality sampling at main-stem sites on Laurel Hill Creek and tributaries in 2007. Stream temperatures were monitored continuously at five main-stem sites from 2007 to 2010. Water usage in the basin was summarized for 2003 and 2009 and a Water-Analysis Screening Tool (WAST) developed for the Pennsylvania State Water Plan was implemented to determine whether the water use in the basin exceeded the “safe yield” or “ the amount of water that can be withdrawn from a water resource over a period of time without impairing the long-term utility of a water resource .” A groundwater and surface-water flow (GSFLOW) model was developed for Laurel Hill Creek and calibrated to the measured daily streamflow from 1991 to 2007 for the streamflow-gaging station near the outlet of the basin at Ursina, Pa. The CWPA designation requires an assessment of current and future water use. The calibrated GSFLOW model can be used to assess the hydrologic effects of future changes in water use and land use in the basin. Analyses of samples collected for surface-water quality during base-flow conditions indicate that the highest nutrient concentrations in the main stem of Laurel Hill Creek were at sites in the northeastern part of the basin where agricultural activity is prominent. All of the total nitrogen (N) and a majority of the total phosphorus (P) concentrations in the main stem exceeded regional nutrient criteria levels of 0.31 and 0.01 milligrams per liter (mg/L), respectively. The highest total N and total P concentrations in the main stem were 1.42 and 0.06 mg/L, respectively. Tributary sites with the highest nutrient concentrations are in subbasins where treated wastewater is discharged, such as Kooser Run and Lost Creek. The highest total N and total P concentrations in subbasins were 3.45 and 0.11 mg/L, respectively. Dissolved chloride and sodium concentrations were highest in the upper part of the basin downstream from Interstate 76 because of road deicing salts. The mean base-flow concentrations of dissolved chloride and sodium were 117 and 77 mg/L, respectively, in samples from the main stem just below Interstate 76, and the mean concentrations in Clear Run were 210 and 118 mg/L, compared to concentrations less than 15 mg/L in tributaries that were not affected by highway runoff. Water quality in forested tributary subbasins underlain by the Allegheny and Pottsville Formations was influenced by acidic precipitation and, to a lesser extent, the underlying geology as indicated by pH values less than 5.0 and corresponding specific conductance ranging from 26 to 288 microsiemens per centimeter at 25 degrees Celsius for some samples; in contrast, pH values for main stem sites ranged from 6.6 to 8.5. Manganese (Mn) was the only dissolved constituent in the surface-water samples that exceeded the secondary maximum contaminant level (SMCL). More than one-half the samples from the main stem had Mn concentrations exceeding the SMCL level of 50 micrograms per liter (μg/L), whereas only 19 percent of samples from tributaries exceeded the SMCL for Mn. Stream temperatures along the main stem of Laurel Hill Creek became higher moving downstream. During the summer months of June through August, the daily mean temperatures at the five sites exceeded the limit of 18.9 degrees Celsius (°C) for a cold-water fishery. The maximum instantaneous values for each site ranged from 27.2 to 32.8 °C. Water-quality samples collected at groundwater sites (wells and springs) indicate that wells developed within the Mauch Chunk Formation had the best water quality, whereas wells developed within the Allegheny and Pottsville Formations yielded the poorest water quality. Waters from the Mauch Chunk Formation had the highest median pH (7.6) and alkalinity (80 mg/L calcium carbonate) values. The lowest pH and alkalinity median values were in waters from the Allegheny and Pottsville Formations. Groundwater samples collected from wells in the Allegheny and Pottsville Formations also had the highest concentrations of dissolved iron (Fe) and dissolved Mn. Seventy-eight percent of the groundwater samples collected from the Allegheny Formation exceeded the SMCL of 300 μg/L for Fe and 50 μg/L for Mn. Forty-three and 62 percent of the groundwater samples collected from the Pottsville Formation exceeded the SMCL for iron and Mn, respectively. The highest Fe and Mn concentrations for surface waters were measured for tributaries draining the Pottsville Formation. The highest median Fe concentration for tributaries was in samples from streams draining the Allegheny Formation. During base-flow conditions, the streamflow per unit area along the main stem of Laurel Hill Creek was lowest in the upper parts of the basin [farthest upstream site 0.07 cubic foot per second per square mile (ft 3 /s/mi 2 )] and highest (two sites averaging about 0.20 (ft 3 /s/mi 2 ) immediately downstream from Laurel Hill Lake in the center of the basin. Tributaries with the highest streamflow per unit area were those subbasins that drain the western ridge of the Laurel Hill Creek Basin. The mean streamflow per unit area for tributaries draining areas that extend into the western ridge and draining eastern or central sections was 0.24 and 0.05 ft 3 /s/mi 2 , respectively. In general, as the drainage area increased for tributary basins, the streamflow per unit area increased. Criteria established by the Pennsylvania Department of Environmental Protection indicate that the safe yield of water withdrawals from the Laurel Hill Creek Basin is 1.43 million gallons per day (Mgal/d). Water-use data for 2009 indicate that net (water withdrawals subtracted by water discharges) water withdrawals from groundwater and surface-water sources in the basin were approximately 1.93 Mgal/d. Water withdrawals were concentrated in the upper part of the basin with approximately 80 percent of the withdrawals occurring in the upper 36 mi 2 of the basin. Three subbasins—Allen Creek, Kooser Run, and Shafer Run— in the upper part were affected the most by water withdrawals such that safe yields were exceeded by more than 1,000 percent in the first two and more than 500 percent in the other. In the subbasin of Shafer Run, intermittent streamflow characterizes sections that historically have been perennial. The GSFLOW model of the Laurel Hill Creek Basin is a simple one-layer representation of the groundwater flow system. The GSFLOW model was primarily calibrated to reduce the error term associated with base-flow periods. The total amount of observed streamflow at the Laurel Hill Creek at Ursina, Pa. streamflow-gaging station and the simulated streamflow were within 0.1 percent over the entire modeled period; however, annual differences between simulated and observed streamflow showed a range of -27 to 24 percent from 1992 to 2007 with nine of the years having less than a 10-percent difference. The primary source of simulated streamflow in the GSFLOW model was the subsurface (interflow; 62 percent), followed by groundwater (25 percent) and surface runoff (13 percent). Most of the simulated subsurface flow that reached the stream was in the form of slow flow as opposed to preferential (fast) interflow.

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