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At least 289 records · Page 16Linked to original sources

Tuberculosis in wild birds: implications for captive birds

The geographic distribution of avian tuberculosis is widespread but the lack of visible epizootics makes assessment of its impact on wild birds difficult. Generally a low prevalence, widely-scattered, individual animal disease, avian tuberculosis is caused by the same agent in wild and domestic birds. Thus there exists the potential for disease transfer between these two groups in situations that result in direct contact such as wild animals newly captured or transferred from rehabilitation centers, and wild and captive animals intermingling in exhibit areas. During the past 7 yr, tuberculosis caused by Mycobacterium avium, was diagnosed in 64 birds submitted to the National Wildlife Health Research Center from 16 states; avian tuberculosis was the primary diagnosis in 52 of the 64 birds, while the remaining 12 isolates were incidental findings. Twenty-eight of these birds were picked up during epizootics caused by other disease agents including avian cholera, botulism type C, and lead, organophosphorus compound, and cyanide poisoning. Twelve birds were found incidental to birds collected during disease monitoring programs and research projects, and 10 birds were collected by hunters or found sick and euthanatized. Tuberculosis lesions occurred (in order of decreasing frequency) in the liver, intestine, spleen, lung, and air sacs. Several unusual morphological presentations were observed in the gizzard, shoulder joint, jugular vein, face, nares and bill, ureter and bone marrow. Infected birds were collected during all 12 mo of the yr from a variety of species in the Anseriformes, Podicipediformes, Gruiformes, and Falconiformes. Nine of the 46 known age birds were immature indicating that lesions can develop during the first year.

Book↗

Observations of geese foraging for clam shells during spring on the Yukon-Kuskokwim Delta, Alaska

We studied the behavior of geese on exposed river ice during spring on the Yukon-Kuskokwim Delta. The predominant behavior while on the ice for both sexes was foraging; however, females foraged more than males. Visual inspection of the ice revealed no potential plant or animal food items. However, numerous small (<20 mm) clam shells ( Macoma balthica ) and pieces of shell were noted. It appeared that geese were foraging on empty clam shells. This potential source of calcium was available to breeding geese just prior to egg formation and geese likely stored this calcium in the form of medullary bone for use during egg formation.

Alaska↗

Late summer survival of adult female and juvenile spectacled eiders on the Yukon-Kuskokwim Delta, Alaska

We used radio-telemetry to examine survival of adult female and juvenile Spectacled Eiders (Somateria fischeri) from 30 days after hatch until departure from the Yukon-Kuskokwim Delta (YKD) during 1997-1999. Juvenile survival was 71.4%; adult female survival was 88.5%. Mink (Mustella vison) were the most common predator identified for both adults and juveniles. Detectable levels of lead were found in bones of 74% of juvenile carcasses recovered and 21% had levels indicative of acute exposure. Average age at departure was 59 ?? 1 days old for juveniles and 56 ?? 1 days after hatch for adults. Most broods (60.5%) departed the YKD synchronously. Overall our data indicate that mortality during the latter half of brood-rearing is higher than previously thought. We conclude that brood rearing is a period of high mortality for brood-rearing females and that lead poisoning is responsible for reductions in juvenile survival to fledging. Received 15 February 2000, accepted 1 April 2000.

Waterbirds↗

Geology of the Carnegie museum dinosaur quarry site of Diplodocus carnegii, Sheep Creek, Wyoming

The holotype of Diplodocus carnegii Hatcher, 1901, consists of a partial skeleton (CM 84) that was recovered, along with a second partial skeleton of the same species (CM 94), from the upper 10 m of the Talking Rock facies of the Brushy Basin Member of the Morrison Formation exposed along Bone Quarry Draw, a tributary of Sheep Creek in Albany County, Wyoming. A composite measured section of the stratigraphic interval exposed adjacent to the quarry indicates that the Brushy Basin Member in this area is a stacked succession of lithofacies consisting of hackly, greenish gray, calcareous mudstone and greenish brown, dense, fine-grained limestone. The more erosion resistant limestone layers can be traced over many hundreds of meters. Thus, these strata do not appear to represent a highly localized deposit such as a stream channel, oxbow lake, or backwater pond. The Sheep Creek succession is interpreted as representing a clastic-dominated lake where high turbidity and sediment influx produced deposition of calcareous mudstone. During drier periods the lake's turbidity decreased and limestone and dolomite precipitation replaced mud deposition. Microkarsting at the top of some limestone/ dolomite layers suggests subaerial deposition may have prevailed during these dry episodes. The quarry of D. carnegii was excavated within the top strata of one of the numerous intervals of hackly, greenish gray, calcareous mudstone that represent an ephemeral freshwater lake. The quarry strata are directly overlain by 0.3 m of dolomite-capped limestone that was deposited shortly after interment of D. carnegii in the lake mudstones. The close vertical proximity of the overlying limestone to the skeleton's stratigraphic: level suggests that the animal's carcass may have been buried beneath the drying lake deposits during a period of decreased rainfall.

Annals of Carnegie Museum↗

Eo-Ulrichian to Neo-Ulrichian views: The renaissance of "layer-cake stratigraphy"

Classical notions of "layer-cake stratigraphy" have been denigrated as representing an antiquated "Neptunian" view of the geologic record with the American paleontologist-stratigrapher E.O. Ulrich vilified as its quintessential advocate. Some of the extreme "layer-cake" interpretations of E.O. Ulrich are demonstrably incorrect, especially where applied in marginal marine and terrestrial settings. However, close scrutiny of Ulrich's work suggests that the bulk was correct and demonstrated considerable insight for the time. Subsequent development of facies concepts revolutionized geologists' view of time-space relationships in stratigraphy, but rather than focusing on facies patterns within the established stratigraphic (layer-cake) frameworks many geologists in North America came to view strata as parts of diachronous facies mosaics. Recent advances in the development of event and sequence stratigraphic paradigms are beginning to swing the pendulum back the other way. Possible causes of "layer-cake" patterns are numerous and varied, including: (1) parallelism of depositional strike and outcrop belts, especially in foreland basins, (2) very widespread environmental belts developed in low-relief cratonic areas, (3) time-averaging homogenizes facies to a limited extent, resulting in a very subtle signature of lateral change, (4) condensed beds (hardgrounds, bone beds, ironstones, etc.) often form in responses to extrabasinal forces, thus they cross-cut facies, and (5) large events (i.e. hurricanes, floods, tsunamis, eruptions, etc.) are "over represented" in the rock record. A revised ("Neo-Ulrichian") layer-cake paradigm carries many of the original correct empirical observations of pattern, noted by Ulrich, recast in terms of event and sequence stratigraphy.

Conference Paper↗

Clutch and egg allometry of the turtle Mauremys leprosa (Chelonia: Geoemydidae) from a polluted peri-urban river in west-central Morocco

We examined the relationships of clutch size (CS) and egg size to female body size (straight-line carapace length, CL) in a population of the turtle Mauremys leprosa from a polluted segment of oued (river) Tensift in arid west-central Morocco. Twenty-eight adult females were collected in May&ndash;July, 2009 and all were gravid. Each was weighed, measured, humanely euthanized and then dissected. Oviductal shelled eggs were removed, weighed (egg mass, EM) and measured for length (EL) and width (EW). Clutch mass (CM) was the sum of EM for a clutch. Pelvic aperture width (PAW) was measured at the widest point between the ilia bones through which eggs must pass at oviposition. The smallest gravid female had a CL of 124.0 mm. Mean CS was relatively large (9.7&plusmn;2.0 eggs, range: 3&ndash;13) and may reflect high productivity associated with polluted (eutrophic) waters. Regression analyses were conducted using log-transformed data. CM increased isometrically with maternal body size. CS, EW and EM were all significantly hypoallometric in their relationship with CL. EL did not change significantly with increases in CL. EW increased at a hypoallometric rate with increasing CL but was unconstrained by PAW since the widest egg was smaller than the narrowest PAW measurement when excluding the three smallest females. Smaller females may have EW constrained by PAW. As females increase in size they increase both clutch size and egg width in contradiction to predictions of optimal egg size theory.

Tensift River↗

Gopherus agassizii (Agassiz’s desert tortoise). scute dysecdysis/scute sloughing

Desert tortoises with scute injuries due to fire or disease related processes can result in loss of the scute. These animals appear to function normally, and can replace the scute material with a keratinized layer that covers the bone. This paper describes a tortoise with severe scute loss from a wildfire in 2005, and an animal that lost its scute for unknown reasons. Both animals appeared to be healthy in all other aspects, and lived for many years afterward.

Herpetological Review↗

Infectious diseases in Yellowstone’s canid community

Each summer Yellowstone Wolf Project staff visit den sites to monitor the success of wolf reproduction and pup rearing behavior. For the purposes of wolf monitoring, Yellowstone National Park (YNP) is divided into two study areas, the northern range and the interior, each distinguished by their ecological and physiographical differences. The 1,000 square kilometer northern range, characterized by lower elevations (1,500–2,200 m), serves as prime winter habitat for ungulates and supports a higher density of wolves than the interior (20–99 wolves/1,000 km 2 versus 2–11 wolves/1,000 km 2 ). The interior of the park encompasses 7,991 square kilometers, is higher in elevation, receives higher annual snowfall, and generally supports lower densities of wolves and ungulates. During the Yellowstone Wolf Project’s 2005 observations on the northern range, researchers noticed that some wolf pups were disappearing and those that remained were unusually listless. The Slough Creek pups, at first numbering 18, dwindled to three survivors. Similar findings were mirrored at other den sites across the northern range. When annual den surveys were conducted in late July, all that remained were scattered piles of bones and fur. Coyotes suffered similar setbacks in 2005, with many of the survivors exhibiting neurological shakes and tremors. The park’s canids had been affected by something, but what? Prompted by what seemed to be a disease outbreak, the Yellowstone Wolf Project, the Yellowstone Ecological Research Center (YERC), and the University of Minnesota decided to take several collaborative approaches toward improving our understanding of the presence and role of infectious disease in Yellowstone’s canid community. Several serological studies have been conducted in the past among the park’s coyotes (Gese et al. 1997) and cougars (Biek 2006), providing a helpful foundation on which to build and compare. A serological survey was conducted, using serum samples collected during routine wolf and coyote captures over a period of 18 years (Almberg et al. 2009). Simulation models were used to explore the dynamics of canine distemper virus (Almberg et al. 2010)—one of the more prominent pathogens in terms of its effects on its hosts—and several long-term pathogen surveillance projects were initiated which are intended to someday provide a foundation for more advanced genetic-based analyses of pathogen dynamics. Since these initial efforts, the group has also expanded the research to include a study of sarcoptic mange, which began affecting wolves and coyotes in YNP in 2006 and 2007.

Yellowstone National Park↗

Primary mapping and stratigraphic data and field methods for the Snowmastodon Project

During the Snowmastodon Project, many different people collected data for a wide array of purposes under a variety of conditions. Early in the process and in an attempt to provide project-wide consistency, Kirk Johnson appointed Carol Lucking as the project’s data manager both in the field and the lab. She was responsible for using GIS to create maps on an ongoing basis throughout the project. Jeff Pigati agreed to measure stratigraphic sections and coordinate the collection of various nonvertebrate samples to make sure that all resulting data could be plotted on common diagrams. Kirk Johnson was onsite for the entire project and measured the basin margin stratigraphy on a daily basis as it was destroyed by the digging teams. In the fall of 2010, we treated the upper part of the site (which included discrete excavations for the mammoth, deer, and bison skeletons) as an archaeological excavation and the lower part of the site (which contained isolated mastodon, ground sloth, and bison bones) as a construction salvage site.

Colorado↗

Volcanoes in outer space and inner space

AS a teenager, I spent many long, bone-chilling hours studying the Moon and the planets with a rickety, homemade telescope. After 30 years, I still recall the pain and pleasure of creeping illicitly out of the house in the small hours of the morning for the few moments of satisfaction when the boiling, bouncing image of Jupiter would come to rest momentarily in sharp focus, the Galilean satellites strung out like brilliant beads on either side of the flattened disc. For me, then, the most remarkable piece of volcanology in the last twenty years was the discovery of active volcanism on Io, one of those tiny points of light I grew to know so well, though I was never really sure which satellite was which. To be sure, flying in a helicopter over the wasteland surrounding Mount St. Helens shortly after the 1980 eruption left an indelible, visceral impression on me, as it must have done to a great many others. But the discovery of volcanism on Io was a stunning piece of pure science.

Earthquakes & Volcanoes (USGS)↗

Bobcat ( Felis rufus ) ecology and management

The bobcat ( Felis rufus ) is a medium sized predator in the family Felidae found exclusively in North America. Extensive natural history information is available and is summarized in several bibliographies and reviews (Sweeny and Poelker 1977, McCord and Cardoza 1982, Boddicker 1983, Anderson 1987, Rolley 1987). The bobcat is a spotted cat with a short white-tipped tail, small dark ear tufts and is about twice the size of the house cat ( Felis domesticus ) because of the bobcat’s longer bone structure (McCord and Cardoza 1982, Jameson and Peeters 1988). The bobcat weights between 5- 15 kg with males larger than females. TL 700- 1000, T 95-150, E (from crown) 60-75 (Jameson and Peeters 1988).

Conference Paper↗

Elk reintroductions

Rocky Mountain elk are native to northcentral New Mexico, including the Jemez Mountains, whereas a different subspecies, Merriam’s elk, inhabited southern New Mexico, east-central Arizona, and the Mexican border region (Hall 1981). Merriam’s elk went extinct around 1900 in New Mexico, and native Rocky Mountain elk were extirpated by 1909 (Findley et al. 1975). Although elk were known to early inhabitants of the Jemez Mountains (Fig. 1), elk remains are seldom found in archaeological sites there. Indeed, two of three known elk remains from the Jemez Mountains (Table) came from archaeological sites dating to the late 1880’s, while the third is represented by a single bone tool dated at A.D. 1390 to 1520. This scarcity of elk in archaeological remains suggests that only small, local elk populations were present between A.D. 1150 and A.D. 1600. Elk numbers may have been suppressed by the many ancestral Pueblo people who inhabited the area, as suggested for nearby Arroyo Hondo by Lang and Harris (1984) and for the intermountain West by Kay (1994). The gray wolf, the most important natural predator of elk in the Jemez Mountains, was extirpated from the area by the 1940’s (Findley et al. 1975). Hunting has reduced local populations of another elk predator, the mountain lion (Allen 1989).

New Mexico↗

Water

What do you use water for? If someone asked you this question you would probably think right away of water for drinking. Then you would think of water for bathing, brushing teeth, flushing the toilet. Your list would get longer as you thought of water for cooking, washing the dishes, running the garbage grinder. Water for lawn watering, for play pools, for swimming pools, for washing the car and the dog. Water for washing machines and for air conditioning. You can hardly do without water for fun and pleasure—water for swimming, boating, fishing, water-skiing, and skin diving. In school or the public library, you need water to wash your hands, or to have a drink. If your home or school bursts into flames, quantities of water are needed to put it out. In fact, life to Americans is unthinkable without large supplies of fresh, clean water. If you give the matter a little thought, you will realize that people in many countries, even in our own, may suffer from disease and dirt simply because their homes are not equipped with running water. Imagine your own town if for some reason - an explosion, perhaps - water service were cut off for a week or several weeks. You would have to drive or walk to a neighboring town and bring water back in pails. Certainly if people had to carry water themselves they might not be inclined to bathe very often; washing clothes would be a real chore. Nothing can live without water. The earth is covered by water over three-fourths of its surface - water as a liquid in rivers, lakes and oceans, and water as ice and snow on the tops of high mountains and in the polar regions. Only one-quarter of our bodies is bone and muscle; the other three-fourths is made of water. We need water to live, and so do plants and animals. People and animals can live a long time without food, but without water they die in a few days. Without water, everything would die, and the world would turn into a huge desert.

Book↗

Subdivision and regional stratigraphy of the pre-Punta Gorda rocks (lowermost cretaceous-jurassic?) in South Florida

In recent years several wells have been drilled in the South Florida Basin through carbonate and evaporite sequences to depths as much as 5,300 ft below the Punta Gorda Anhydrite. The deepest well penetrated igneous basement rocks to a total depth of 18, 670 ft. Correlation of anhydrite beds below the Punta Gorda has revealed several thick anhydrite units (200 to 400 ft) with regional persistence. The pre-Punta Gorda section is subdivided into four easily identifiable units listed in order of increasing age — Lehigh Acres (lowermost Comanchean), Pumpkin Bay (upper Coahuilan), Bone Island (lower Coahuilan), and Wood River (Jurassic?) Formations, all newly named in this report. In addition, the Lehigh Acres is divided into the West Felda Shale (base), Twelve Mile, and Able Members which are also named and defined in this report. Geochemical evidence indicates that the Lehigh Acres unit and the upper part of the Pumpkin Bay unit contain the most likely source beds for petroleum. Only two production tests have been carried out in the basin in strata below the oil-productive Sunniland Limestone. One was through casing in a Wood River dolomite zone. It reportedly produced water and some gas. The other was a drill stem test in an upper Pumpkin Bay dolomite zone which produced only water. In the Gulf Florida State Lease 826Y (Permit No. 275), a moderately porous, 350-ft-thick Pumpkin Bay dolomite zone was observed. As this well is west of the axis of the basin, better reservoir conditions presumably exist on the West Florida shelf than onshore.

Florida↗

Fifty years after Welles and Welles: Distribution and genetic structure of Desert Bighorn Sheep in Death Valley National Park

The status of desert bighorn sheep (Ovis canadensis nelsoni) populations in the mountains around Death Valley was first evaluated in 1938, shortly after designation of Death Valley National Monument. However, the most comprehensive evaluation of bighorn sheep in the region was conducted by Ralph and Florence Welles during 1955-1961. They documented patterns of use at water sources and other focal areas around Death Valley and roughly estimated numbers of bighorn sheep from observational data. Data collection on bighorn sheep in the area since that time has lacked a regional approach needed to address metapopulation questions.From 2011-2013, we evaluated bighorn activity at important water sources and other likely locations around Death Valley using remote cameras and observations of tracks, beds, sign, and bighorn sheep, and non-invasively collected genetic samples (fecal pellets and bones). Where possible, we revisited many of the water sources and other locations originally investigated by Welles and Welles (1961) and earlier researchers. We extracted DNA from fecal pellets, carcass tissue samples, and blood samples archived from earlier captures and genotyped them using highly variable genetic markers (15 microsatellite loci) with sufficient power to distinguish individuals and characterize gene flow and genetic structure. We also analyzed DNA samples collected from other bighorn sheep populations extending north to the White Mountains, west to the Inyo Mountains, south to the Avawatz Mountains, and southeast to the Clark Mountain Range, Kingston Range, and Spring Mountains of Nevada. We estimated genetic structure and recent gene flow among nearly all known populations of bighorn sheep in and around Death Valley National Park (DEVA), and used assignment tests to evaluate individual and population-level genetic structure to infer connectivity across the region. We found that bighorn sheep are still widely distributed in mountain ranges throughout DEVA, including many of the areas described by Welles and Welles (1961), although some use patterns appear to have changed and other areas still require resurvey. Gene flow was relatively high through some sections of fairly continuous habitat, such as the Grapevine and Funeral Mountains along the eastern side of Death Valley, but other populations were more isolated. Genetic diversity was relatively high throughout the park. Although southern Death Valley populations were genetically distinct from populations to the southeast, population assignment tests and recent gene flow estimates suggested that individuals occasionally migrate between those regions, indicating the potential for the recent outbreak of respiratory disease in the southern Mojave Desert to spread into the Death Valley system. We recommend careful monitoring of bighorn sheep using remote cameras to check for signs of respiratory disease in southeastern DEVA and ground surveys in the still-understudied southwestern part of DEVA.

Conference Paper↗

Multiple stacked plays to drive continued Permian development

The exploitation of unconventional (continuous) resource plays with horizontal drilling and fracturing techniques continues to spur renewed development in mature producing basins in the US. The Permian basin of west Texas has emerged as a particularly strong prospect due to the potential for multiple stacked resource plays in formations such as the Wolfcamp shale and Spraberry and Bone Spring formations. Production began in the Permian basin in the early 1920s, and more than 116,000 wells have been drilled in Midland basin alone. 1 2 In 2017, total Permian basin oil production climbed to nearly 1.7 million b/d. 3 The US Geological Survey (USGS) conducts geologic-based assessments of undiscovered, technically recoverable domestic hydrocarbon resources. The USGS recently assessed the Wolfcamp shale in the Midland basin portion of the Permian basin for continuous (unconventional) oil and gas resources, and completed a reassessment of the Spraberry formation for both continuous and conventional oil and gas. 4 5 Combined, the assessments of the Spraberry formation and underlying Wolfcamp shale in Midland basin comprise the largest domestic continuous oil assessment in the contiguous US (Fig. 1).

Texas↗

Encylopedia of Caves

For many people, a visit to a cave is a wondrous event directing our minds to ponder the mysteries presented by these unique places and inspiring questions: How old is the cave? What was the role of water in forming the cave and where did the water come from? How is the cave connected to the surface environment? These are intriguing questions to ask, and karst scientists use isotope geochemistry to help solve these mysteries. Isotopes are atoms of the same chemical element that have the same number of protons but vary in their number of neutrons. As a result of their atomic mass difference, isotopes of a single element may exhibit slightly different chemical behavior. Radioisotopes are unstable and the nucleus of a parent isotope will spontaneously break apart (decay), releasing energy and changing into another element (daughter product) by loss or gain of protons, neutrons, or electrons. Stable isotopes, as implied by the name, are stable and do not spontaneously decay. These two types of isotopes are used widely by scientists to understand ancient and modern karst systems. Generally, radioisotopes are used for absolute dating karst water, cave sediments, cave formations (speleothems), and other material preserved in caves (such as bones). Stable isotopes can provide information about relative ages of cave water and speleothems. An absolute age provides a numeric date—such as 100,000 years old—whereas a relative age provides information that something is older or younger than something else—such as cave art is younger than a speleothem found in the same cave. Stable isotopes are used to study ancient karst systems because isotopic signals of past climate (paleoclimate) and environmental conditions (paleoenvironment) are preserved in speleothems and sediments. Stable isotopes are also used to understand modern systems, primarily through studies that distinguish sources of karst water, cave air, or contaminants, mixing of those sources, and biologic or chemical reactions that process compounds, such as breakdown of contaminants or organic matter. The variation in mass among isotopes is small, and isotope abundances are measured as a ratio of a common isotope to its less common isotopic counterparts (stable isotopes) or the abundance of a parent compared to daughter isotope (radioisotopes). As an example, hydrogen (H) has three naturally occurring isotopes. Most H comprises one proton (1H), but the rarer stable isotope (called deuterium) comprises one proton and one neutron (2H), and the radioisotope (called tritium) comprises one proton and two neutrons (3H). Because scientists use the minute differences in isotopes to test hypotheses, a scientist must understand the accuracy, precision, and error of the available methods, the assumptions about the chemical conditions of interest, and the limitations of the isotopic method being used. Many isotopic studies employ multiple isotopic tracers to better leverage the strengths and offset the limitations of using a single isotope. This article focuses on isotopes used to study the geology and hydrology of caves, but much additional isotopic work has been used to characterize the biology of caves.

Book chapter↗

Beloniformes: Belonidae (Needlefishes) and Hemiramphidae (Halfbeaks)

The order Beloniformes (or Synentognathi) contains two suborders, six families, 37 genera, and about 235 species of atherinomorph fishes (Rosen & Parenti 1981; Collette et al. 1984; Collette 2004). Features common to these fishes include dorsal and anal fins on the rear half of the body, abdominal pelvic fins with six soft rays, no fin spines, lateral line running along the ventral edge of the body, an open nasal pit, and lower pharyngeal bones fused into a triangular plate (leading to the name Synentognathi). Two families, the Flying fishes (Exocoetidae) and the Sauries (Scomberesocidae) are restricted to marine waters but several genera of Needlefishes (Belonidae) and Halfbeaks (Hemiramphidae and Zenarchopteridae) are restricted to fresh waters and other genera contain estuarine, freshwater, and marine species. The family name Belonidae, based on the type genus Belone, means needle in reference to the unusually long and slender jaws of most Needlefishes. Similarly, the family name Hemiramphidae means half-beak, alluding to the conspicuous presence of a long slender lower jar and a short upper jaw in most species. Two species of Needlefishes (Belonidae, Strongylura) and two species of Halfbeaks (Hemiramphidae, Hyporhamphus) occur in North American fresh waters.

Book chapter↗