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At least 271 records · Page 15Linked to original sources
USGS2022

Adult Atlantic salmon (Salmo salar) delayed below dams rapidly deplete energy stores

Atlantic salmon ( Salmo salar ) return to rivers in spring for an energetically costly upstream migration for spawning. These fish are often delayed in the lower river below dams, subjecting them to warmer waters than occur in upstream sections of river, that may increase metabolic costs. We sought to quantify the energetic cost of dam-mediated delays in migrating adults in the Penobscot and Kennebec rivers, ME. We radio-tagged fish at the lower most dams, released them downstream (18 and 14 km), and tracked their movements back upstream. We used a Distell Fish Fatmeter as a noninvasive measurement of full-body energy at tagging and then again after re-ascending the fish-way at the dams. We found that adults ( n = 99) experienced average delays of 16–23 days at dams, losing 11%–22% of initial fat reserves. Using linear regressions, we showed thermal experience as a strong predictor of fat loss. Delay time was also a contributing factor. Extensive delays at dams expose migrating Atlantic salmon to warmer temperatures and increase the depletion rate of energy reserves required for spawning and post-spawn survival.

Maine↗
USGS2022

Effects of dam-induced delays on system-wide survival of Atlantic salmon smolts during high-flow, high-survival years in the Penobscot River, Maine, USA

System-wide survival of hatchery-reared Atlantic salmon ( Salmo salar ) smolts was evaluated (2017–2019) in the Penobscot River and compared to survival estimates from previous years that spanned major changes (2005–2016). This system was transformed through two dam removals in 2012 and construction of a nature-like passage structure at a third. The main stem had three dams (five prior to 2012), while the main tributary had four dams (one with the new nature-like passage). We estimated survival using acoustic telemetry mark–recapture ( n = 1482) from 2017 to 2019. Six release sites and two release dates were included to assess system-wide survival. Survival from 2017 to 2019 was higher than previous years, with total cumulative survival > 0.75, independently of year and release sites, compared to survival < 0.5 in previous years. These years coincided with exceptional high flows not seen previously. We found an effect of delays on survival, longer delays associated with lower survival. Overall, survival in these years increased in all reaches relative to previous years except for one dam, Weldon Dam, which was a site of sustained high mortality.

Maine↗
USGS2023

Effects of freshwater residence time on reproductive success in anadromous alewife (Alosa pseudoharengus): climate change implications

Earlier spring warming and anadromous fish migrations prompted by climate change are linked to shorter freshwater residency. Impacts of phenological change on anadromous fish populations are poorly understood with limited studies focused on iteroparous non-salmonids. We assessed freshwater residence time and reproductive success in an iteroparous clupeid, alewife ( Alosa pseudoharengus ) using a pedigree analysis and otolith-based spawning dates from captured juveniles. The primary objectives were to (1) estimate adult spawning duration in a freshwater pond (freshwater residence time) and (2) evaluate adult freshwater residence time, arrival date, length, sex, and reproductive success across 2 years in one system. Estimated freshwater residence times varied widely (1–64 days), and longer residence times were associated with earlier arrival dates, higher reproductive success, and more mating events. Longer freshwater residence times may allow alewife to spawn with more mates, produce more gametes, and experience a range of spawning and nursery conditions. Plasticity in alewife freshwater residence time could support earlier and shorter migration periods but may result in lower reproductive output if adults spend less time in freshwater ponds.

Massachusetts↗
USGS2023

Juvenile sea lamprey (Petromyzon marinus) have a wide window of elevated salinity tolerance that is eventually limited during springtime warming

The present study examined changes in biometric characteristics, osmoregulatory capacity, and seawater (SW) tolerance of juvenile sea lamprey ( Petromyzon marinus ) throughout the varying thermal changes from late autumn to late spring. Body length, mass, and condition factor were maintained until April, when significant declines in mass and condition factor were observed to correspond with increases in temperature. Nearly 100% survival in SW was maintained through April. In May, after river and estuarine temperatures had increased, significant mortality in SW (up to 50%) was observed. After SW acclimation, plasma chloride was maintained at an elevated set point, and gill Na + /K + -ATPase activity was elevated. Neither parameter appeared to be affected during springtime warming. Together, these results provide a first characterization of the sustained osmoregulatory performance of juvenile sea lamprey after metamorphosis and show that the window of increased hypo-osmoregulatory performance for SW entry lasts for at least 5 months but may ultimately be limited by increases in river water temperatures in late spring.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2023

Using continuous surveys to evaluate precision and bias of inferences from design-based reach-scale sampling of stream habitat

Accurately estimating stream characteristics is essential for managing and restoring populations and aquatic ecosystems. Reach-based sampling designs have been used extensively to collect fisheries related data; however, few studies have examined the effectiveness of reach-based sampling designs for stream habitat assessments. Here, we used continuous habitat surveys to census stream attributes in tributaries in the upper Lewis River, WA and better understand the potential bias and precision of reach-based designs. We used resampling analyses via bootstrapping to create simulated outcomes of different sampling designs including simple random with equal probability, simple random with unequal probability, and a generalized random tessellation stratified design (GRTS). We found precision of estimates of habitat attributes (large woody debris, residual pool depth, and grain size) increased with sampling intensity; however, the effort needed to achieve reasonable precision (CV = 0.20) varied across streams, attributes, and designs. Bias was relatively low, but also varied across streams and attributes. Our findings illustrate the challenges of using reach-based designs for stream habitat assessments and the need for novel approaches for broader data collection.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2023

Connecting habitat to species abundance: The role of light and temperature on the abundance of walleye in lakes

Walleye ( Sander vitreus) are an ecologically important species managed for recreational, tribal, and commercial harvest. Walleye prefer cool water and low light conditions, and therefore changing water temperature and clarity potentially impacts walleye habitat and populations across the landscape. Using survey data collected from 1993 to 2018 from 312 lakes in Minnesota, we evaluated the relationship between thermal-optical habitat and the relative abundance of small (0–300 mm), medium (300–450 mm), and large (450 + mm) walleye. Thermal-optical habitat was positively correlated with the relative abundance of small and medium walleye but not large walleye. Walleye were more abundant in larger, naturally reproducing lakes opposed to smaller, stocked lakes. Thermal-optical habitat changed in 59% of lakes since 1980 (26% increasing and 33% decreasing) and appears to be driven primarily by changes in water clarity and thus optical habitat area. Our study provides important insights into local and regional drivers that influence walleye populations that can be used to assist fisheries managers in setting population goals and managing harvest.

Minnesota↗
USGS2023

Territories within groups: The dynamic competition of drift-feeding juvenile Chinook salmon in 3-dimensional space

Salmonid populations are often regulated by territorial competition among juveniles for food and space. In the canonical view, salmonid territories are spaced horizontally across the river bottom in a 2-D mosaic. However, some juveniles instead feed in tight, three-dimensional (3-D) social groups. To investigate whether territoriality is possible within such groups, we applied a new concept—the momentary home range—to quantify the size, exclusivity, and temporal dynamics of 3-D space use by juvenile Chinook Salmon ( Oncorhynchus tshawytscha ) in the Chena River, Alaska. Individual strategies spanned a broad continuum of exclusivity and stationarity. However, some of the largest, most dominant fish in each group aggressively defended stationary, exclusive feeding spaces and thus were unambiguously territorial. Transient floaters entered and left the group quickly. A majority of fish were not aggressive but nevertheless occupied exclusive, stationary spaces that probably function as territories with regard to resource distribution and population regulation. The presence of territoriality within social groups, in a 3-D configuration, expands the known domain of this important behavior.

Alaska↗
USGS2023

Longitudinal analyses of catch-at-age data for reconstructing year-class strength, with an application to lake trout (Salvelinus namaycush) in the main basin of Lake Huron

We investigated using longitudinal models to reconstruct year-class strength (YCS) from catch-at-age data, with an example application to lake trout ( Salvelinus namaycush ) in the main basin of Lake Huron. The best model structure depended on the age range used for model implementation. The YCS trajectory from the full age range (3–30 years) was similar to the trajectory from a narrow age range that approximated the age of recruitment to the fishing gears (5–7 years), but YCS estimates from the full age range included additional variations due to time-dependent selectivity and mortality. When using ages younger or older than the likely ages of recruitment, YCS estimates did not represent recruitment abundances and were also biased by trends in age-specific selectivity and mortality across years. Longitudinal YCS estimates are likely more robust than single-age recruitment indices, which are often subject to interannual changes in catchability and selectivity. Our findings provide guidance for future applications of the longitudinal YCS reconstruction that in turn may inform and supplement more comprehensive research and management programs for understanding fish recruitment dynamics.

Lake Huron↗
USGS2023

Drought related changes in water quality surpass effects of experimental flows on trout growth downstream of Lake Powell reservoir

Flows released from reservoirs are often modified to mitigate the negative ecosystem effects of dams. We estimated the effects of two experimental flows, fall-timed floods and elimination of sub-daily variation in flows on weekends, on growth rates of rainbow trout (Oncorhynchus mykiss) in the Colorado River downstream from Glen Canyon Dam. Experimental flow effects were compared to effects of water temperature, phosphorous concentration, solar insolation, and competition, by fitting mixed effect von Bertalanffy models to ~ 10,000 observations of growth from mark-recapture between 2012 and 2021. There was strong support for models predicting faster growth during intervals with higher solar insolation, and lower water temperature and competition for prey. Effects of phosphorus and experimental flows were small and uncertain. Drought-related increases in dam release temperatures during summer and fall were predicted to result in severe weight loss for larger trout and could eventually threaten the viability of the population and the fishery it supports. The effects of water temperature and competition on fish growth substantially exceeded the effects of controlled floods and steadier flows.

Arizona, Utah↗
USGS2023

Evaluating regional length limits in freshwater fisheries

Length limits are often used in recreational fisheries management to prevent overharvest and manipulate fish size distributions. These regulations are ideally customized to meet water-specific stock dynamics and fishery objectives. However, in districts with numerous discrete waters, fisheries are commonly managed with a universal regional regulation. Evaluating alternative regional length limits requires consideration of management objectives that may not be important at the single-system level but that emerge as relevant at the regional scale, such as uniformity of regional harvest, diversity of average catch sizes, and opportunity to harvest. We developed a flexible tool for evaluating regional length limits. The tool joins the well-established Beverton–Holt yield-per-recruit model with elements of decision-support methods. The model quantifies regional management objectives as utility functions that are weighted and summed into a single value used to evaluate alternative length limits. The flexibility of the tool stems from its capacity to consider a mixture of stock parameters and associated uncertainty to evaluate multiple length limits, weighting an array of regional fishery objectives quantified by various performance metrics. This adjustability affords flexibility to consider a diversity of options that can stimulate innovation in setting regional length limits. We demonstrate the model by evaluating varying length limits on fishery objectives related to the management of hypothetical yellow perch ( Perca flavescens ) populations and real black crappie ( Pomoxis nigromaculatus ) populations.

Canadian Journal Fisheries and Aquatic Sciences↗
USGS2023

The scale-dependent role of submerged macrophytes as drift-feeding lotic fish habitat

Although submerged macrophyte (hereafter, “macrophyte”) communities are globally prevalent in low-gradient rivers, the net reach-scale effect of macrophytes on drift-feeding fish microhabitat preference is poorly understood. We used snorkeling and bioenergetics to study fish habitat selection for rainbow trout ( Oncorhynchus mykiss ) in the Henrys Fork, ID, USA, investigating microhabitat preference across a reach-scale gradient of macrophyte growth. Fish preferred microhabitats with deep water, low velocity, and low macrophyte coverage. Preferences for microhabitats with higher net rate of energy intake (NREI) were modulated by reach-scale macrophyte coverage, higher coverage increasing preferences for higher NREI. Macrophyte coverage was a weak positive predictor for depth and NREI, and a weak negative predictor for water velocity and median substrate. Our results suggest trade-offs between fish predation risk and bioenergetic food intake, with macrophytes modulating these trade-offs across scales by affecting reach-scale geomorphology, bioenergetics, and predation risk. As such, this study highlights the important and dynamic role that macrophytes can play in fish population dynamics in rivers, with important implications for management decisions.

Idaho↗
USGS2023

Tracking anadromous fish over successive freshwater migrations reveals the influence of tagging effect, previous success and abiotic factors on upstream passage over barriers

Predicting and mitigating the impact of anthropogenic barriers on migratory fish requires an understanding of the individual and environmental factors that influence barrier passage. Here, the upstream spawning migrations of iteroparous twaite shad Alosa fallax were investigated over three successive spawning migrations in a highly fragmented river basin using passive acoustic telemetry (n=184). More fish approached and passed barriers in the lower river reaches than further upstream, with the median cumulative weir passage time (IQR) of 4.6 (1.8 - 9.2) days representing 18% of their time in river. Returning fish in their second year had significantly higher weir passage rates than in their tagging year, with passage rates also positively influenced by previous passage success. Higher water temperature and river level also had positive impacts on passage rates. Lower weir passage rates by newly tagged individuals suggests that reliance on within-year passage estimates in telemetry-based barrier impact assessments could result in conservative results, while higher passage rates of previously successful versus unsuccessful individuals suggests a conserved motivation and/or inherent ability to pass barriers.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2023

Linking ecosystem processes to consumer growth rates: Gross primary productivity as a driver of freshwater fish somatic growth in a resource-limited river

Individual growth can exert strong controls on population dynamics and be constrained by resource acquisition rates. Difficulty in accurately quantifying resource availability over large spatial extents and at high temporal frequency often limits attempts to understand the extent that resources limit individual growth. Daily estimates of stream metabolism, including gross primary productivity (GPP), are increasingly available but have not, to our knowledge, been linked to fish growth. Here we examine how GPP, water temperature, high flow and turbidity are linked to spatiotemporal variation in growth of flannelmouth sucker (Catostomus latipinnis). We fit state space growth models to six years of mark-recapture data collected in four river reaches spanning 300 river kilometers. Consistent with past research in this system, we find that water temperature is the dominant driver of spatiotemporal variation in growth. However, we also find that GPP is strongly linked to fish growth. Fish growth is likely to be linked to stream metabolism in other systems where overall productivity, not the quality of primary producers, limits the food webs that support fish growth.

Arizona↗
USGS2023

Impeding access to tributary spawning habitat and releasing experimental fall-timed floods increases brown trout immigration into a dam's tailwater

River ecosystems have been altered by flow regulation and species introductions. Regulated flow regimes often include releases designed to benefit certain species or restore ecosystem processes, and invasive species suppression programs may include efforts to restrict access to spawning habitat. The impacts of these management interventions are often uncertain. Here, we assess hypotheses regarding introduced brown trout (Salmo trutta) movement in a regulated river. We model mark-recapture data in a multistate framework to assess whether movement was affected by the operation of a tributary weir (restricting access to spawning habitat), experimental releases of fall-timed High Flow Experiments (Fall HFEs), or simply increased during the fall, spawning season. Our results suggest that the presence of the weir led to reduced tributary homing and the release of Fall HFEs stimulated upstream movement and straying. Both effects are of a similar magnitude, however the fall HFE effect is more certain. Our results suggest the expansion of an invasive species was stimulated by management interventions, and demonstrate the potential for unanticipated outcomes of restoration in highly altered river ecosystems.

Arizona, Utah↗
USGS2023

Who spawns where? Temperature, elevation, and discharge differentially affect the distribution of breeding by six Pacific salmonids within a large river basin

Within the geographic range of salmonid fishes, many apparently suitable rivers and streams are used for reproduction by some species but not others. This is widely known but seldom addressed, as studies often examine factors determining the distribution of one or only a few species. We examined physical factors associated with the spawning distribution of six native Pacific salmonids (pink, chum, coho, and Chinook salmon, bull trout, and steelhead) in the Skagit River basin, Washington. Annual mean temperature and catchment elevation had the strongest association with spawning assemblage distribution, but stream length, annual discharge, seasonal hydrology, and land use were also influential. Some species (e.g., pink and Chinook salmon) were more closely associated with each other and with common variables than others, and bull trout were the most distinctive. For interpretation, we investigated the roles of adult body size, timing of spawning, and duration of juvenile rearing, but none of these factors explained groupings in the data. Interspecific differences in habitat association remained, suggesting fundamental constraints on species distributions with implications for conservation and restoration.

Washington↗
USGS2023

Redd superimposition mediates the accuracy, precision, and significance of redd counts for cutthroat trout

Redd counts are commonly applied to estimate spawning population size for salmonids and allow for broad spatial and temporal coverage in monitoring efforts. However, the utility of redd counts may be compromised by observation error, particularly with respect to superimposition, where later arriving spawners construct redds overlapping existing redds. Here, we provide a mechanistic evaluation of the effects of superimposition on the error structure and biological significance of redd count data for Yellowstone cutthroat trout ( Oncorhynchus clarkii bouvieri ) spawning within tributaries to the Snake River, Wyoming. We used a Bayesian framework to parse observation error into distinct components and found low detection of redd clusters (i.e., areas of superimposition) was offset by overestimates of the number of redds per cluster, such that observed counts accurately reflected census redd abundance. However, a saturating relationship between redd counts and spawner abundance indicated that counts is best interpreted as effective reproductive effort rather than spawner abundance. Our results provide a mechanistic understanding of redd count data that can be used to assess their application and interpretation for monitoring.

Wyoming↗
USGS2023

A generalized application of the catch-curve regression with comparisons of adult mortality and year-class strength between hatchery-stocked and wild-reared lake trout in US waters of Lake Huron

The recently developed approach to estimating the instantaneous total mortality of coded-wire-tagged lake trout ( Salvelinus namaycush ) is generally applicable to catch-at-age data. We further formalized the technique to objectively incorporate the year-class and year effects into the model structure of catch-curve regression. We used this new method to compare adult mortality and year-class strength between the hatchery-stocked and wild-reared lake trout in US waters of Lake Huron, one of the Laurentian Great Lakes. Model comparisons showed no difference in adult mortality between the hatchery-stocked and wild-reared lake trout. Based on 95% confidence intervals, the estimate of adult mortality using the simple catch-curve regression with average number-at-age was not statistically different from the estimate using the linear mixed model with individual number-at-age of multiple year-classes and sampling years. The linear mixed model, however, also quantified lake trout year-class strength and indicated that since 2003, the increases in recruitment of wild-reared lake trout did not fully compensate for the rapid declines in recruitment of hatchery-stocked lake trout in Lake Huron.

Lake Huron↗