Search USGSSearch

SEARCH · Search USGS

Results for “Analytical Methods”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 271 records · Page 15Linked to original sources

Detecting and inferring cause of change in an Alaska nearshore marine ecosystem

Community composition, species abundance, and species distribution are expected to change while monitoring ecosystems over time, and effective management of natural resources requires understanding mechanisms contributing to change. Marine ecosystems in particular can be difficult to monitor, in part due to large, multidimensional spatial scales and complex dynamics. However, within the temperate marine ecosystems, the nearshore food web is reasonably well described. This food web is ecologically and socially important, spatially constrained, and has been the focus of extensive experimental research that describes the underlying mechanisms important to system dynamics. Here, we describe a monitoring program initiated in 2006 that focuses on the nearshore benthic food web in the Gulf of Alaska, whose design anticipates potential causes of ecosystem change to improve rigor, resolution, and confidence in understanding the mechanisms underlying change. We established 15 long‐term monitoring sites across more than 1000 km of coastline, including 10 within two national parks and 5 within Prince William Sound, area of the 1989 Exxon Valdez oil spill. The program evaluates six ecological indicators and more than 200 species that range from primary producers to top‐level consumers, and is designed to examine both bottom‐up and top‐down dynamics. Employing a design that allows broad spatial inference and selecting species with direct food‐web linkages, we demonstrate the ability of our monitoring program to simultaneously detect change and assess potential mechanisms underlying that change. Detecting change and understanding mechanisms can help guide management and conservation policy. Specifically, we provide an example focusing on the sea otter ( Enhydra lutris ) that illustrates how (1) analytical methods are used to evaluate changes on various scales and infer potential mechanisms of change, (2) food‐web linkages can enhance the understanding of changes and their effects, and (3) data can be used to inform management.

Alaska

Can grazing by elk and bison stimulate herbaceous plant productivity in semiarid ecosystems?

Plant communities in rangeland ecosystems vary widely in the degree to which they can compensate for losses to herbivores. Ecosystem-level factors have been proposed to affect this compensatory capacity, including timing and intensity of grazing, and availability of soil moisture and nutrients. Arid ecosystems are particularly challenging to predict because of their high degree of temporal variability in moisture inputs. We used a replicated herbivore exclusion experiment to evaluate herbaceous plant responses to grazing by large ungulates to test current theory and identify constraints on plant compensation in a dryland ecosystem. We measured nitrogen (N) yield and herbaceous production in three plant communities: meadows, willow-associated herbaceous communities, and riparian communities. We implemented grazing exclusion treatments from 2005 to 2008 in areas with elk and bison and areas with only elk. Grazing by large ungulates increased herbaceous production and N yield in herbaceous riparian communities. In willow communities, herbaceous plants displayed equal compensation in response to grazing in total aboveground production and N yield. Our results support the idea that plant compensation in this semiarid system is contingent on soil moisture availability, wherein the most productive sites (that received substantial moisture inputs from subsurface flow) exhibited overcompensation. Although the herbaceous riparian communities we studied are isolated patches of productive grassland in an otherwise shrub-dominated and minimally productive semiarid landscape, grazing by a combination of bison and elk removed only 44%–53% of aboveground net primary productivity (ANPP) during the growing season, and 25%–38% of production over winter. Consumption by ungulates was a positive linear function of herbaceous production, similar to reported patterns from other temperate and tropical grazing ecosystems. The slope of this relationship was affected by the analytical method used to calculate ANPP and consumption rates, but, regardless of the method, was lower or similar to reported slopes for other intensively grazed systems (Yellowstone, Serengeti, Laikipia) that have sustained high ungulate densities for decades to centuries. Given that the vegetation communities exhibited equal or overcompensation in terms of total herbaceous ANPP in both years, elk and bison population levels during our study period did not appear to occur at densities leading to degradation of herbaceous communities.

Colorado

Disentangling geomorphic equifinality in sediment and hydrologic connectivity through the analyses of landscape drivers of hysteresis

Sources, transport mechanisms and pathways of fine sediment in river systems are dependent on a multitude of climatic, geomorphic and anthropogenic factors, resulting in geomorphic equifinality, in which it is difficult to parse how different landscape processes affect sediment transport across different spatiotemporal scales. The objectives of this study are to 1) provide a conceptual model to consider how differing spatial distributions and hydrologic timing of sediment sources, both upland and in-channel, can result in equifinal sediment transport outcomes, and 2) utilize analytical methods with widely available environmental datasets to infer sediment processes from stream gaging data. Hysteretic patterns of observed storm events were classified based on their direction and timing of peak sediment concentration, relative to streamflow, using records from 35 U.S. Geological Survey stream gages in the period between 2007 and 2023 within two different physiographic regions: the Mid-Atlantic Delaware River Basin (DRB) and the Midwestern Illinois River Basin (IRB). The DRB contains mixed forest, urban, suburban and agricultural watersheds over diverse topography, and the IRB is primarily an intensively managed agricultural watershed on flat terrain. We use principal component analysis and linear discriminant analysis to infer regional hydrologic relations with turbidity dynamics, and to identify the primary hydrologic and land surface characteristics most effective at distinguishing between hysteretic classes in each region. These analyses reveal underlying regional relations in storm event hydrodynamics and landscape characteristics that contribute to varying patterns in sediment dynamics. Incorporating these sediment dynamic relations with spatial distributions and hydrologic timing of sediment sources could help to improve process understanding and predictive capability of fine sediment transport in watersheds.

Delaware, Illinois, Indiana, New Jersey, New York,

Pesticides in Mississippi air and rain: A comparison between 1995 and 2007

A variety of current-use pesticides were determined in weekly composite air and rain samples collected during the 1995 and 2007 growing seasons in the Mississippi Delta (MS, USA) agricultural region. Similar sampling and analytical methods allowed for direct comparison of results. Decreased overall pesticide use in 2007 relative to 1995 generally resulted in decreased detection frequencies in air and rain; observed concentration ranges were similar between years, however, even though the 1995 sampling site was 500 m from active fields whereas the 2007 sampling site was within 3 m of a field. Mean concentrations of detections were sometimes greater in 2007 than in 1995, but the median values were often lower. Seven compounds in 1995 and 5 in 2007 were detected in ≥50% of both air and rain samples. Atrazine, metolachlor, and propanil were detected in ≥50% of the air and rain samples in both years. Glyphosate and its degradation product, aminomethyl-phosphonic acid (AMPA), were detected in ≥75% of air and rain samples in 2007 but were not measured in 1995. The 1995 seasonal wet depositional flux was dominated by methyl parathion (88%) and was >4.5 times the 2007 flux. Total herbicide flux in 2007 was slightly greater than in 1995 and was dominated by glyphosate. Malathion, methyl parathion, and degradation products made up most of the 2007 nonherbicide flux.

Mississippi

Accumulation of current-use and organochlorine pesticides in crab embyros from northern California, USA

Invertebrates have long been used as resident sentinels for assessing ecosystem health and productivity. The shore crabs, Hemigrapsus oregonensis and Pachygrapsus crassipes, are abundant in estuaries and beaches throughout northern California, USA and have been used as indicators of habitat conditions in several salt marshes. The overall objectives of the present study were to conduct a lab-based study to test the accumulation of current-use pesticides, validate the analytical method and to analyze field-collected crabs for a suite of 74 current-use and legacy pesticides. A simple laboratory uptake study was designed to determine if embryos could bioconcentrate the herbicide molinate over a 7-d period. At the end of the experiment, embryos were removed from the crabs and analyzed by gas chromatography/mass spectrometry. Although relatively hydrophilic (log K(OW) of 2.9), molinate did accumulate with an estimated bioconcentration factor (log BCF) of approximately 2.5. Following method validation, embryos were collected from two different Northern California salt marshes and analyzed. In field-collected embryos 18 current-use and eight organochlorine pesticides were detected including synthetic pyrethroids and organophosphate insecticides, as well as DDT and its degradates. Lipid-normalized concentrations of the pesticides detected in the field-collected crab embryos ranged from 0.1 to 4 ppm. Pesticide concentrations and profiles in crab embryos were site specific and could be correlated to differences in land-use practices. These preliminary results indicate that embryos are an effective sink for organic contaminants in the environment and have the potential to be good indicators of ecosystem health, especially when contaminant body burden analyses are paired with reproductive impairment assays.

California

Considerations in As analysis and speciation

This article summarizes recent experiences in arsenic (As) quantification, preservation, and speciation developed during AWWA Research Foundation (AWWARF) and Water Industry Technical Action Fund (WITAF) projects. The goal of this article is to alert analysts and decision-makers to potential problems in As analysis and speciation, because there appear to be several unresolved problems with routine analytical approaches. In true split drinking water samples As was quantified by three accepted analytical methods in three laboratories. The techniques used were graphite furnace atomic absorption spectrometry (GFAAS), inductively coupled plasma mass spectrometry (ICP-MS), and hydride generation inductively coupled plasma-emission spectrometry (HG-ICP-AES). Experimental findings are organized into sections on As analysis, particulate As in water supplies, and examination of As speciation methods.

Journal of the American Water Works Association

Spatial patch occupancy patterns of the Lower Keys marsh rabbit

Reliable estimates of presence or absence of a species can provide substantial information on management questions related to distribution and habitat use but should incorporate the probability of detection to reduce bias. We surveyed for the endangered Lower Keys marsh rabbit ( Sylvilagus palustris hefneri ) in habitat patches on 5 Florida Key islands, USA, to estimate occupancy and detection probabilities. We derived detection probabilities using spatial replication of plots and evaluated hypotheses that patch location (coastal or interior) and patch size influence occupancy and detection. Results demonstrate that detection probability, given rabbits were present, was <0.5 and suggest that naïve estimates (i.e., estimates without consideration of imperfect detection) of patch occupancy are negatively biased. We found that patch size and location influenced probability of occupancy but not detection. Our findings will be used by Refuge managers to evaluate population trends of Lower Keys marsh rabbits from historical data and to guide management decisions for species recovery. The sampling and analytical methods we used may be useful for researchers and managers of other endangered lagomorphs and cryptic or fossorial animals occupying diverse habitats.

Florida

Evaluating response distances to develop buffer zones for staging terns

Buffer zones, calculated by flight‐initiation distance (FID), are often used to reduce anthropogenic disturbances to wildlife, but FID can vary significantly across life‐history stages. We examined the behavioral effect of potential natural (gulls and shorebirds) and anthropogenic (pedestrians) disturbance sources to staging roseate ( Sterna dougallii ) and common tern ( S. hirundo ) flocks from July to September in 2014 and 2015 at Cape Cod, Massachusetts, USA. We estimated the proportion of the flock exhibiting different responses to potential disturbance sources as a function of distance, flock size, percent roseate terns, and local disturbance rates, using Bayesian zero‐and‐one inflated beta regression. The proportion of tern flocks responding to the presence of shorebirds by flying was low (0.01 ± 0.001 [SE]) and did not vary by distance or other covariates, whereas the proportion flying in response to gulls increased as distance decreased, with smaller flocks, and with flocks with a larger proportion of roseate terns being more sensitive to gull presence. Prolonged flight response rapidly increased in probability from 0.0 to as much as 1.0 as distance from pedestrians to the flock decreased from 100 m and was much more likely with smaller flocks. Pedestrian activity levels also had an effect on flock responses; those engaged in active behaviors such as jogging were more likely to cause flushing than those engaged in passive behaviors. Terns seemed to view pedestrians as more of a threat than shorebirds and gulls, even though gulls are frequent kleptoparasites of terns. Pedestrians >120 m from a tern flock generally elicited the same probability of flight response as shorebirds and gulls. We recommend managers maintain anthropogenic disturbance levels at or below the intensity of those from natural sources at sites where recreation and wildlife values are both important. Because staging tern flocks may use a variety of areas within a site, we recommend instituting a 100‐m buffer around areas potentially used by staging flocks at Cape Cod, where we studied every location roseate terns are known to use in large numbers. For other sites used by mixed‐species tern flocks, we recommend the use of our field and analytical methods to develop appropriate buffer distances that will keep pedestrians far enough away to reduce the likelihood of flight and other non‐locomotive anti‐predator behaviors. These buffer zones will also benefit other species sensitive to human activity.

Journal of Wildlife Management

Regional walrus abundance estimate in the United States Chukchi Sea in autumn

Human activities (e.g., shipping, tourism, oil, gas development) have increased in the Chukchi Sea because of declining sea ice. The declining sea ice itself and these activities may affect Pacific walrus ( Odobenus rosmarus divergens ) abundance; however, previous walrus abundance estimates have been notably imprecise. When sea ice is absent from the eastern Chukchi Sea, walruses in waters of the United States usually rest together onshore at a single Alaska coastal haulout, where they can be surveyed more easily than when they rest on dispersed offshore ice floes. We estimated the number of walruses on land (herd size) at this haulout from 13 unoccupied aircraft system (UAS) surveys flown within a 10-day period in each of 2018 and 2019. We estimated population size of walruses using the haulout over the course of the surveys by combining herd size data with data from satellite-linked transmitters that indicated whether tagged walruses were in or out of water during each survey. Our estimates of the population size of walruses using the haulout during each year's survey period were similar to each other and more precise than historical walrus abundance estimates: posterior means (95% credibility intervals) were 166,000 (133,000–201,000) for 2018 and 189,000 (135,000–251,000) for 2019. Auxiliary observations support using these estimates to represent the size of the population using the eastern Chukchi Sea in autumn during the surveyed years. Our study site was the only substantial Chukchi Sea coastal haulout in the United States during the survey periods and study-specific tracking data (consistent with known distribution and movement patterns) indicated tagged walruses remained in eastern Chukchi waters during the survey periods. In addition, the imagery, telemetry, and analytical methods developed for this study advance the prospect for precise range-wide walrus population size estimates.

Alaska

Accounting for spatial heterogeneity in visual obstruction in line-transect distance sampling of gopher tortoises

Line-transect distance sampling (LTDS) surveys are commonly used to estimate abundance of animals or objects. In terrestrial LTDS surveys of gopher tortoise ( Gopherus polyphemus ) burrows, the presence of ground-level vegetation substantially decreases detection of burrows of all sizes, but no field or analytical methods exist to control for spatially heterogeneous vegetation obstruction as a source of variation in detection. We propose the addition of a simple measurement of ground-level vegetation that serves as a covariate for the detection function. We present a Bayesian hierarchical model in which covariates burrow width and nearby vegetation height help to account for detection bias and improve precision of estimated density. We investigate the performance of this covariate by simulation and by using real LTDS data collected before and after application of prescribed fire. We collected data in 2018 at the Jones Center at Ichauway in Newton, Georgia, USA. Across all simulations, our model including both covariates produced the most accurate density point estimates of any of the models tested. For our case study, our Bayesian model with vegetation covariates tended to produce similar estimates of density before and after burns. Our study indicates that any level of spatial variation in vegetation obstruction decreases detection of burrows and may lead to underestimation in population size (≤68%) and proportion of individuals with small burrow sizes (≤32%) when not considered during analysis. Our work is extensible to other terrestrial sampling efforts where systematic measurement of a spatially distributed obstructing feature is feasible during the LTDS survey.

Georgia

Precision and relative effectiveness of a purse seine for sampling age-0 river herring in lakes

Stock assessments for anadromous river herring, collectively Alewife Alosa pseudoharengus and Blueback Herring A. aestivalis , lack adequate demographic information, particularly with respect to early life stages. Although sampling adult river herring is increasingly common throughout their range, currently no standardized, field‐based, analytical methods exist for estimating juvenile abundance in freshwater lakes. The objective of this research was to evaluate the relative effectiveness and sampling precision of a purse seine for estimating densities of age‐0 river herring in freshwater lakes. We used a purse seine to sample age‐0 river herring in June–September 2015 and June–July 2016 in 16 coastal freshwater lakes in the northeastern USA. Sampling effort varied from two seine hauls to more than 50 seine hauls per lake. Catch rates were highest in June and July, and sampling precision was maximized in July. Sampling at night (versus day) in open water (versus littoral areas) was most effective for capturing newly hatched larvae and juveniles up to ca. 100 mm TL. Bootstrap simulation results indicated that sampling precision of CPUE estimates increased with sampling effort, and there was a clear threshold beyond which increased effort resulted in negligible increases in precision. The effort required to produce precise CPUE estimates, as determined by the CV, was dependent on lake size; river herring densities could be estimated with up to 10 purse‐seine hauls (one‐two nights) in a small lake (<50 ha) and 15–20 hauls (two‐three nights) in a large lake (>50 ha). Fish collection techniques using a purse seine as described in this paper are likely to be effective for estimating recruit abundance of river herring in freshwater lakes across their range.

North American Journal of Fisheries Management

Oxygen isotope corrections for online δ34S analysis

Elemental analyzers have been successfully coupled to stable-isotope-ratio mass spectrometers for online measurements of the δ34S isotopic composition of plants, animals and soils. We found that the online technology for automated δ34S isotopic determinations did not yield reproducible oxygen isotopic compositions in the SO2 produced, and as a result calculated δ34S values were often 1–3‰ too high versus their correct values, particularly for plant and animal samples with high C/S ratio. Here we provide empirical and analytical methods for correcting the S isotope values for oxygen isotope variations, and further detail a new SO2-SiO2 buffering method that minimizes detrimental oxygen isotope variations in SO2.

Rapid Communications in Mass Spectrometry

Isotopic tracing of perchlorate in the environment

Isotopic measurements can be used for tracing the sources and behavior of environmental contaminants. Perchlorate (ClO 4 − ) has been detected widely in groundwater, soils, fertilizers, plants, milk, and human urine since 1997, when improved analytical methods for analyzing ClO 4 − concentration became available for routine use. Perchlorate ingestion poses a risk to human health because of its interference with thyroidal hormone production. Consequently, methods for isotopic analysis of ClO 4 − have been developed and applied to assist evaluation of the origin and migration of this common contaminant. Isotopic data are now available for stable isotopes of oxygen and chlorine, as well as 36 Cl isotopic abundances, in ClO 4 − samples from a variety of natural and synthetic sources. These isotopic data provide a basis for distinguishing sources of ClO 4 − found in the environment, and for understanding the origin of natural ClO 4 − . In addition, the isotope effects of microbial ClO 4 − reduction have been measured in laboratory and field experiments, providing a tool for assessing ClO 4 − attenuation in the environment. Isotopic data have been used successfully in some areas for identifying major sources of ClO 4 − contamination in drinking water supplies. Questions about the origin and global biogeochemical cycle of natural ClO 4 − remain to be addressed; such work would benefit from the development of methods for preparation and isotopic analysis of ClO 4 − in samples with low concentrations and complex matrices.

Book chapter

Sources and age of aquatic humus

As aquatic scientists have recognized the diversity of processes controlled by or dependent upon aquatic humus, it has become important to learn more about the genesis, chemical properties, and concentration of humic substances in aquatic ecosystems. There are three classes of aquatic humus (fulvic acids, humic acids, and humin), all of which share the characteristics of being heterogeneous biomolecules which are yellow to brown or black in color, high to moderate molecular weight, and biologically recalcitrant. Fulvic acids are organic acids which are soluble at any pH; humic acids are soluble above pH 2; and humin is insoluble under the full range of pH. Aquatic humus occurs in both dissolved and solid phases, with molecular weights ranging from about 500 D for dissolved fulvic acid to greater than 100,000 D for humic acids in sediments. Although the heterogeneity of these humic fractions makes rigorous chemical studies challenging, there are sufficient analytical methods at hand to make progress toward understanding the sources, formation pathways, and fate of aquatic humus.

Book chapter

Cyanide and migratory birds at gold mines in Nevada, USA

Since the mid-1980s, cyanide in heap leach solutions and mill tailings ponds at gold mines in Nevada has killed a large but incompletely documented number of wildlife (>9,500 individuals, primarily migratory birds). This field investigation documents the availability of cyanide at a variety of ‘typical’ Nevada gold mines during 1990 and 1991, describes wildlife reactions to cyanide solutions, and discusses procedures for eliminating wildlife loss from cyanide poisoning. Substantial progress has been made to reduce wildlife loss. About half of the mill tailings ponds (some up to 150 ha) in Nevada have been chemically treated to reduce cyanide concentrations (the number needing treatment is uncertain) and many of the smaller heap leach solution ponds and channels are now covered with netting to exclude birds and most mammals. The discovery of a cyanide gradient in mill tailings ponds (concentration usually 2–3 times higher at the inflow point than at reclaim point) provides new insight into wildlife responses (mortality) observed in different portions of the ponds. Finding dead birds on the tops of ore heaps and associated with solution puddling is a new problem, but management procedures for eliminating this source of mortality are available. A safe threshold concentration of cyanide to eliminate wildlife loss could not be determined from the field data and initial laboratory studies. New analytical methods may be required to assess further the wildlife hazard of cyanide in mining solutions.

Nevada

Survey of trace elements in coals and coal-related materials by neutron activation analysis

Utilizing primarily instrumental neutron activation analysis (INAA) and other analytical methods as many as 61 elements were quantitatively surveyed in 170 U.S. whole coals, 70 washed coals, and 40 bench samples. Data on areal and vertical distributions in various regions were obtained along with extensive information on the mode of occurrence of various elements in the coal matrix itself. ?? 1977 Akade??miai Kiado??.

Journal of Radioanalytical Chemistry

Near-field tsunami edge waves and complex earthquake rupture

The effect of distributed coseismic slip on progressive, near-field edge waves is examined for continental shelf tsunamis. Detailed observations of edge waves are difficult to separate from the other tsunami phases that are observed on tide gauge records. In this study, analytic methods are used to compute tsunami edge waves distributed over a finite number of modes and for uniformly sloping bathymetry. Coseismic displacements from static elastic theory are introduced as initial conditions in calculating the evolution of progressive edge-waves. Both simple crack representations (constant stress drop) and stochastic slip models (heterogeneous stress drop) are tested on a fault with geometry similar to that of the M w = 8.8 2010 Chile earthquake. Crack-like ruptures that are beneath or that span the shoreline result in similar longshore patterns of maximum edge-wave amplitude. Ruptures located farther offshore result in reduced edge-wave excitation, consistent with previous studies. Introduction of stress-drop heterogeneity by way of stochastic slip models results in significantly more variability in longshore edge-wave patterns compared to crack-like ruptures for the same offshore source position. In some cases, regions of high slip that are spatially distinct will yield sub-events, in terms of tsunami generation. Constructive interference of both non-trapped and trapped waves can yield significantly larger tsunamis than those that produced by simple earthquake characterizations.

Pure and Applied Geophysics

Development and certification of the new SRM 695 trace elements in multi-nutrient fertilizer

During the past seven years, several states within the US have enacted regulations that limit the amounts of selected non-nutritive elements in fertilizers. Internationally, several countries, including Japan, China, and Australia, and the European Union also limit the amount of selected elements in fertilizers. The elements of interest include As, Cd, Co, Cr, Cu, Hg, Mo, Ni, Pb, Se, and Zn. Fertilizer manufacturers and state regulatory authorities, faced with meeting and verifying these limits, need to develop analytical methods for determination of the elements of concern and to validate results obtained using these methods. Until now, there were no certified reference materials available with certified mass fraction values for all elements of interest in a blended, multi-nutrient fertilizer matrix. A new standard reference material (SRM) 695 trace elements in multi-nutrient fertilizer, has been developed to help meet these needs. SRM 695 has recently been issued with certified mass fraction values for seventeen elements, reference values for an additional five elements, and information values for two elements. The certificate of analysis includes an addendum listing percentage recovery for eight of these elements, determined using an acid-extraction inductively-coupled plasma optical-emission spectrometry (ICP-OES) method recently developed and tested by members of the Association of American Plant Food Control Officials. ?? Springer-Verlag 2007.

Conference Paper