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At least 253 records · Page 14Linked to original sources
USGS2022

Detecting algal toxins and organic contaminants of concern in the environment

The U.S. Geological Survey (USGS) Kansas Water Science Center Organic Geochemistry Research Laboratory (OGRL) was established in 1987. The OGRL is a multidisciplinary program that contributes knowledge about the distribution, fate, transport, and effects of new and understudied organic compounds that may affect human health and (or) ecosystems. The OGRL consists of two units: Algal and Other Environmental Toxins Unit and Environmental Organic Chemistry Unit. The OGRL does independent and collaborative research, develops robust analytical methods, and provides fee-for-service analytical laboratory analyses.

Fact Sheet↗
USGS2019

The expectations and challenges of wildlife disease research in the era of genomics: Forecasting with a horizon scan-like exercise

The outbreak and transmission of disease-causing pathogens are contributing to the unprecedented rate of biodiversity decline. Recent advances in genomics have coalesced into powerful tools to monitor, detect, and reconstruct the role of pathogens impacting wildlife populations. Wildlife researchers are thus uniquely positioned to merge ecological and evolutionary studies with genomic technologies to exploit unprecedented ‘Big Data’ tools in disease research; however, many researchers lack the training and expertise required to use these computationally intensive methodologies. To address this disparity, the inaugural ‘Genomics of Disease in Wildlife’ workshop assembled early to mid-career professionals with expertise across scientific disciplines (e.g., genomics, wildlife biology, veterinary sciences, and conservation management) for training in the application of genomic tools to wildlife disease research. A horizon scanning-like exercise, an activity to identify forthcoming trends and challenges, performed by the workshop participants identified and discussed five themes considered to be the most pressing to the application of genomics in wildlife disease research: i) “Improving Communication”, ii) “Methodological and Analytical Advancements”, iii) “Translation into Practice”, iv) “Integrating Landscape Ecology and Genomics”, and v) “Emerging New Questions”. Wide-ranging solutions from the horizon scan were international in scope, itemized both deficiencies and strengths in wildlife genomic initiatives, promoted the use of genomic technologies to unite wildlife and human disease research, and advocated best practices for optimal use of genomic tools in wildlife disease projects. The results offer a glimpse of the potential revolution in human and wildlife disease research possible through multi-disciplinary collaborations at local, regional, and global scales.

Journal of Heredity↗
USGS2014

Effects of capturing and collaring on polar bears: findings from long-term research on the southern Beaufort Sea population

Context: The potential for research methods to affect wildlife is an increasing concern among both scientists and the public. This topic has a particular urgency for polar bears because additional research is needed to monitor and understand population responses to rapid loss of sea ice habitat. Aims: This study used data collected from polar bears sampled in the Alaska portion of the southern Beaufort Sea to investigate the potential for capture to adversely affect behaviour and vital rates. We evaluated the extent to which capture, collaring and handling may influence activity and movement days to weeks post-capture, and body mass, body condition, reproduction and survival over 6 months or more. Methods: We compared post-capture activity and movement rates, and relationships between prior capture history and body mass, body condition and reproductive success. We also summarised data on capture-related mortality. Key results: Individual-based estimates of activity and movement rates reached near-normal levels within 2–3 days and fully normal levels within 5 days post-capture. Models of activity and movement rates among all bears had poor fit, but suggested potential for prolonged, lower-level rate reductions. Repeated captures was not related to negative effects on body condition, reproduction or cub growth or survival. Capture-related mortality was substantially reduced after 1986, when immobilisation drugs were changed, with only 3 mortalities in 2517 captures from 1987–2013. Conclusions: Polar bears in the southern Beaufort Sea exhibited the greatest reductions in activity and movement rates 3.5 days post-capture. These shorter-term, post-capture effects do not appear to have translated into any long-term effects on body condition, reproduction, or cub survival. Additionally, collaring had no effect on polar bear recovery rates, body condition, reproduction or cub survival. Implications: This study provides empirical evidence that current capture-based research methods do not have long-term implications, and are not contributing to observed changes in body condition, reproduction or survival in the southern Beaufort Sea. Continued refinement of capture protocols, such as the use of low-impact dart rifles and reversible drug combinations, might improve polar bear response to capture and abate short-term reductions in activity and movement post-capture.

Wildlife Research↗
USGS2026

Restoring dryland water cycles for precipitation feedback and climate stability; a review

Drylands across the globe are experiencing intensifying water scarcity, land degradation, and hydroclimatic extremes. This review integrates evidence from multidecadal field studies, hydrologic monitoring, geomorphic and ecological assessments, remote sensing, and land–atmosphere science to evaluate how restoration influences key components of the terrestrial water cycle. Low-tech natural infrastructure in dryland streams (NIDS)—including check dams, leaky weirs, one-rock dams, and gabions—has emerged as a promising but under-synthesized nature-based solution for restoring hydrologic function in these environments. We describe the mechanisms through which these interventions modify runoff detention, infiltration, sediment and alluvial storage, shallow-groundwater recharge, vegetation recovery, and surface-energy partitioning, and we summarize outcomes across diverse dryland settings. Findings consistently show increased water residence time, enhanced soil-moisture storage, expanded riparian vegetation, extended flow duration, and shifts toward greater latent-heat flux—producing localized cooling and strengthened ecohydrological feedbacks. Building on these localized effects, we articulate a hypothesis that links the spatial extent of restoration, the density of NIDS per unit drainage area, and the magnitude of the latent-to-sensible-heat contrast generated by wetter post-rainfall conditions. Specifically, we hypothesize that when NIDS are implemented at densities permitted by topography and across areas large enough to maintain elevated soil moisture after storm events, the resulting increases in latent heat flux, surface cooling, and boundary-layer moistening may enhance moisture convergence and boundary-layer development, potentially increasing the likelihood or stability of convective precipitation, analogous to how reductions in these processes have contributed to regional drought intensification. These land–atmosphere feedbacks remain untested at scale but represent an important research Frontier. By integrating hydrologic, geomorphic, ecological, and atmospheric perspectives, this review provides a comprehensive framework for considering how low-tech, landscape-scale interventions can strengthen watershed resilience and contribute to climate-relevant nature-based solutions.

Arizona↗
USGS2025

Experimental drought suppresses amphibian pathogen yet intensifies transmission and disrupts protective skin microbiome

Shifting precipitation regimes driven by global climate change can alter vertebrate behavior and host-symbiont relationships, potentially compromising host resistance to pathogen invasion. In Brazil's Atlantic Forest, a biodiversity hotspot, prior research identified drought as a key factor disrupting the skin microbiome, contributing to a die-off of pumpkin toadlets due to the invasive waterborne fungal pathogen Batrachochytrium dendrobatidis (Bd). However, observational studies cannot disentangle the direct effect of moisture on Bd growth from increased amphibian activity during wet breeding seasons. Using field enclosures, we experimentally tested the influence of drought conditions on host microhabitat use, Bd disease dynamics, and the composition and predicted Bd-inhibitory function of cutaneous bacterial communities. Each enclosure housed ecologically realistic densities of Brachycephalus pitanga , a micro-endemic pumpkin toadlet. We simulated a short-term drought in half of the enclosures using translucent tarp coverings. To track individual toadlets, we identified their unique markings and collected skin swabs biweekly over 3 months. We then implemented molecular techniques to quantify Bd loads and characterize skin bacterial diversity and composition over time. Our findings indicate that while drought may reduce overall Bd loads on hosts, this effect is partially offset by an increase in the use of water-filled areas of the enclosures and by a disruption of the protective host skin microbiome. This study provides valuable insights into the cascading impacts of climate change on animal behavior, host-symbiont interactions, and disease dynamics.

Atlantic Forest↗
USGS2023

Ground‐motion variability from kinematic rupture models and the implications for nonergodic probabilistic seismic hazard analysis

The variability of earthquake ground motions has a strong control on probabilistic seismic hazard analysis (PSHA), particularly for the low frequencies of exceedance used for critical facilities. We use a crossed mixed‐effects model to partition the variance components from simulated ground motions of M w "> M w 7 earthquakes on the Salt Lake City segment of the Wasatch fault zone. Total variability of simulated ground motions is approximately equivalent to empirical models. The high contribution from rupture speed suggests an avenue to reducing variability through research on the causes and predictions of rupture speed on specific faults. Simulations show a strong spatial heterogeneity in the variability that manifests from directivity effects. We illustrate the impact of this spatial heterogeneity on hazard using a partially nonergodic PSHA framework. The results highlight the benefit of accounting for directivity effects in nonergodic PSHA, in which models that account for additional processes controlling ground motions are paired with reductions in the modeled ground‐motion variability.

Salt Lake City segment of the Wasatch fault zone↗
USGS2004

The world's largest floods, past and present: Their causes and magnitudes

Floods are among the most powerful forces on earth. Human societies worldwide have lived and died with floods from the very beginning, spawning a prominent role for floods within legends, religions, and history. Inspired by such accounts, geologists, hydrologists, and historians have studied the role of floods on humanity and its supporting ecosystems, resulting in new appreciation for the many-faceted role of floods in shaping our world. Part of this appreciation stems from ongoing analysis of long-term streamflow measurements, such as those recorded by the U.S. Geological Survey's (USGS) streamflow gaging network. But the recognition of the important role of flooding in shaping our cultural and physical landscape also owes to increased understanding of the variety of mechanisms that cause floods and how the types and magnitudes of floods can vary with time and space. The USGS has contributed to this understanding through more than a century of diverse research activities on many aspects of floods, including their causes, effects, and hazards. This Circular summarizes a facet of this research by describing the causes and magnitudes of the world's largest floods, including those measured and described by modern methods in historic times, as well as floods of prehistoric times, for which the only records are those left by the floods themselves.

Circular↗
USGS2023

Epistylis spp. infestation in two species of mud turtles (Kinosternon spp.) in the American Southwest

The protistan genus Epistylis contains freshwater colonial species that attach to aquatic organisms in an epibiotic or parasitic relationship. They are known to attach to the epidermis and shells of aquatic turtles, but have not been reported to cause heavy infestations or morbidity in turtles. We documented heavy infestations of Epistylis spp. in several populations of Sonoran mud turtles ( Kinosternon sonoriense ) inhabiting livestock ponds in Arizona, USA, and rough-footed mud turtles ( Kinosternon hirtipes ) from livestock ponds in Texas, USA, over the course of several years. Severe Epistylis spp. infestations on mud turtles appeared to alter diving and swimming behavior when compared to uninfested conspecifics. Infestations were cleared in captivity using tap water or a 10% salt solution, and the turtles had no permanent damage to their shell or epidermis upon clearing. While several of the mud turtles we observed had poor body condition, it is possible that the severe infestations we observed were caused by a comorbidity associated with a pathogen, parasite, or poor habitat quality that made the turtles more susceptible to the Epistylis spp. infestation. Further research on causes for these severe infestations are warranted because they contribute to changes in behavior of the heavily infested turtles and may contribute to morbidity in Kinosternon spp. when mud turtles inhabit extremely warm, shallow, eutrophic aquatic habitats, such as livestock ponds.

Arizona↗
USGS2008

An exploration of Bureau of Reclamation approaches for managing conflict over diverging science

As a major institutional agent supplying Western water resources, the Bureau of Reclamation (Reclamation) provides important leadership, technical, and financial resources in water management, serving as the West's "water broker" (Bowersox 2000; Pisani 2003). In recent years, growing numbers of constituencies using water and the over-allocation of water resources have contributed to conflict over the resource in the American West (National Research Council 2004). Although the conflicts arise from many sources, one common theme is that Reclamation managers often must make decisions about water use and allocation when scientific studies provide uncertain or competing recommendations. We conducted a preliminary study of Reclamation water managers and water scientists to try to understand the approaches or techniques they use or consider useful for dealing with scientific conflicts over water allocation and how these compare to techniques found in the relevant literature. We report the results of (1) an electronic survey of Reclamation senior managers and (2) a panel discussion amongst Reclamation senior managers as to the current institutional capabilities for managing diverging scientific findings in water dispute resolution processes. We conclude with a discussion of the strengths and weaknesses of the different tools and techniques managers reported in the survey and in the panel discussion.

Technical Memorandum↗
USGS1995

USGS supports ecosystem management in the San Francisco bay and delta

In the past several years, the Department of the Interior has ,l?laced particular emphasis on "ecosystem management" - the integration of scientific knowledge of ecological relationships with resource management practices to sustain ecological, cultural, and economic systems in broad habitat areas; eg., forest, desert, and aquatic habitats. The goal of ecosystem management is to understand the habitat requirements of many species and thereby assess the impact of a variety of human activities on regional biodiversity rather than to manage for individual species. In support of the management of the natural resources of San Francisco Bay and the delta, the USGS is augmenting its ongoing research program to provide additional research, monitoring, and assessment information and to improve the availability of that information. Following a workshop with resource and regulatory agency representatives, hosted by the USGS in early 1994, USGS researchers identified specific areas where existing and new scientific information could contribute to resolving some of the critical bay and delta land and aquatic management issues. The "ecosystems initiative" effort now underway addresses questions in three areas: Freshwater flow, including sediment and contaminant transport. Wetlands. Information and data access. Following is a brief description of activities being supported by this initiative.

Interagency Ecological Program Newsletter↗
USGS2024

Layered intrusions in the Precambrian: Observations and perspectives

Layered intrusions are plutonic bodies of cumulates that form by the crystallization of mantle-derived melts. These intrusions are characterized by igneous layering distinguishable by shifts in mineralogy, texture, or composition. Layered intrusions have been fundamental to our understanding of igneous petrology; however, it is their status as important repositories of critical metals – such as platinum-group elements, chromium, and vanadium – that has predominantly driven associated research in recent decades. Many layered intrusions were emplaced during the Precambrian, predominantly at the margins of ancient cratons during intervals of supercontinent accretion and destruction. It appears that large, layered intrusions require rigid crust to ensure their preservation, and their geometry and layering is primarily controlled by the nature of melt emplacement. Layered intrusions are best investigated by integrating observations from various length-scales. At the macroscale, intrusion geometries can be discerned, and their presence understood in the context of the regional geology. At the mesoscale, the layering of an intrusion may be characterized, intrusion-host rock contact relationships studied, and the nature of stratiform mineral occurrences described. At the microscale, the mineralogy and texture of cumulate rocks and any mineralization are elucidated, particularly when novel microtextural and mineral chemical datasets are integrated. For example, here we demonstrate how mesoscale observations and microscale datasets can be combined to understand the petrogenesis of the perplexing snowball oiks outcrop located in the Upper Banded Series of the Stillwater Complex. Our data suggest that the orthopyroxene oikocrysts did not form in their present location, but rather formed in a dynamic magma chamber where crystals were transported either by convective currents or within crystal-rich slurries. Critical metals may be transported to the level of a nascent intrusion as dissolved components in the melt. Alternatively, ore minerals are entrained from elsewhere in a plumbing system, potentially facilitated by volatile-rich phases. There are many ore-forming processes propounded by researchers to occur at the level of emplacement; however, each must address the arrival of the ore mineral, its concentration of metals, and its accumulation into orebodies. In this contribution, several of these processes are described as well as our perspectives on the future of layered intrusion research.

Precambrian Research↗
USGS2008

Climate change and global carbon cycle: Perspectives and opportunities

The relevance of methane hydrates research to broader societal themes is often framed in terms of methane’s role in the global carbon cycle and its potential contribution to future climate change. To date, investigations of these fundamental issues have remained largely disconnected from applied studies focused on locating natural gas hydrate deposits, developing production technologies, and analyzing and mitigating hydrate-related geohazards. The 2005 reauthorization of the 2000 Methane Hydrate Research and Development Act provides broad latitude for better integration of applied and basic research related to methane hydrates, the carbon cycle, and climate change through its direction “to assess and to mitigate the environmental impact of hydrate degassing.” This mandate includes sponsoring research that evaluates whether methane hydrate degassing triggered by either natural or anthropogenic perturbations will (1) contribute to global climate change and (2) release significant quantities of currently sequestered carbon to the ocean-atmosphere system. This article provides an overview of progress and challenges in these areas and sets the stage for future research on related issues under the auspices of the Methane Hydrate Act.

Fire in the Ice: NETL Methane Hydrate Newsletter↗
USGS2024

Ungulate personality and the human shield contribute to long-distance migration loss

Long-distance ungulate migrations are declining and past research has focused on preserving migration paths where habitat fragmentation and loss disrupts movement corridors. However, changing residency-migration tradeoffs are the stronger driver of long-distance migration loss in some populations. The human shield effect relative to predation risk and anthropogenic food resources likely shapes these tradeoffs, but individual animals also vary in their propensity to tolerate proximity to humans and developed areas. We investigated how personality relative to human-habituation affects migration behavior. We categorized elk as bold or shy based on use of anthropogenic food resources identified through a clustering algorithm applied to GPS collar data. Bold elk were 4 times more likely to select wintering areas close to human activity and migrated 60% shorter distances compared to shy elk. As a result, elk wintering grounds were spatially structured such that conflict- and disease-prone individuals selected areas adjacent to human activity. Our results suggest that bold personality traits act as a precursor to human-habituation, which permits bold elk to reap the forage and predation rewards that occur in suburban landscapes. A multi-pronged approach beyond just maintaining habitat corridors may be necessary to conserve long-distance migrations for species that can become human-habituated.

BioRxiv↗
USGS2019

Integrating hydrology and biogeochemistry across frozen landscapes

Research has traditionally focused on atmospheric release of carbon from thawing permafrost, yet overlooked waterborne release pathways likely contribute significantly, especially in a warming Arctic. To address this knowledge gap and better constrain the fate of carbon in the North, we recommend inter-disciplinary efforts bridging physical, chemical and computational research.

Nature Communications↗
USGS2016

Population-specific life histories contribute to metapopulation viability

Restoration efforts can be improved by understanding how variations in life-history traits occur within populations of the same species living in different environments. This can be done by first understanding the demographic responses of natural occurring populations. Population viability analysis continues to be useful to species management and conservation with sensitivity analysis aiding in the understanding of population dynamics. In this study, using life-table response experiments and elasticity analyses, we investigated how population-specific life-history demographic responses contributed to the metapopulation viability of the Federally threatened Pitcher's thistle ( Cirsium pitcheri ). Specifically, we tested the following hypotheses: (1) Subpopulations occupying different environments within a metapopulation have independent demographic responses and (2) advancing succession results in a shift from a demographic response focused on growth and fecundity to one dominated by stasis. Our results showed that reintroductions had a positive contribution to the metapopulation growth rate as compared to native populations which had a negative contribution. We found no difference in succession on the contribution to metapopulation viability. In addition, we identified distinct population-specific contributions to metapopulation viability and were able to associate specific life-history demographic responses. For example, the positive impact of Miller High Dunes population on the metapopulation growth rate resulted from high growth contributions, whereas increased time of plant in stasis for the State Park Big Blowout population resulted in negative contributions. A greater understanding of how separate populations respond in their corresponding environment may ultimately lead to more effective management strategies aimed at reducing extinction risk. We propose the continued use of sensitivity analyses to evaluate population-specific demographic influences on metapopulation viability. In understanding the underlying causes of the projected extinction probabilities of each population and identifying broad-scale contributions of different populations to the metapopulation, the process of pinpointing target populations is simplified. More detailed analyses can then be applied to the target populations to increase population viability and consequently metapopulation viability. Based on our research, we suggest that the best approach to improve the overall metapopulation viability is to manage the contributions to population growth for each population separately.

Ecosphere↗
USGS2023

Species management research program [postcard]

Executive Summary Our nation’s fish and wildlife species face increasingly complex threats and challenges. Ensuring a healthy future for these species benefits all Americans, contributing to the abundance of our food supply, the well-being of diverse cultures and communities, and the future of biodiverse ecosystems. The U.S. Geological Survey Species Management Research Program (SMRP) plays a critical role in achieving that future by delivering targeted research and foundational scientific services needed to conserve fish and wildlife in a changing world.

General Information Product↗
USGS2011

Young (<7 Ma) gold deposits and active geothermal systems of the Great Basin: Enigmas, questions, and exploration potential

Young gold systems in the Great Basin (£ 7 Ma), though not as well studied as their older counterparts, comprise a rapidly growing and in some ways controversial group. The gold inventory for these systems has more than doubled in the last 5 years from roughly 370 tonnes (12 Moz) to 890 tonnes (29 Moz). Although these deposits are characterized by low grades, tonnages can be high and stripping ratios low, and they have been mined profitably, as exemplified by Florida Canyon and Hycroft. Active geothermal systems in the Great Basin also comprise a rapidly growing group, as evidenced by a number of recent discoveries of geothermal groundwater and a more than 50% increase in electricity production capacity from these systems in the last 5 years. Many young gold deposits are closely associated with active geothermal systems, suggesting that gold deposits may be forming today in the Great Basin. Measured or estimated geothermal reservoir temperatures commonly approach or exceed 200∞C, and other characteristics and processes (advanced argillic caps, hydrothermal eruption breccias) of these young deposits resemble those of nearby Tertiary precious metal deposits. Nonetheless, many young gold systems, especially in Nevada, are not associated with coeval igneous rocks. Similarly, almost all electricity-grade geothermal systems in Nevada are not associated with Quaternary silicic volcanic rocks, and have lower temperature gradients, lower 3He/4He ratios, and lower dissolved trace element concentrations than most magmatic-heated geothermal systems elsewhere in the world. The increasing economic significance of young gold deposits and active geothermal systems justifies more research to better understand their origins, particularly because in some aspects they remain enigmatic and controversial. Are young gold deposits in Nevada truly amagmatic, or have they received metal and fluid contributions from magmas deeper within the crust? Has gold in these deposits been remobilized from older gold mineralization? Current research is investigating these and other questions to improve our genetic understanding of these young gold systems, which in turn can lead to improved exploration targeting. The recent rapid growth in resources for both young gold deposits and geothermal systems underscores their underdeveloped exploration potential. Even though many young gold deposits exhibit relatively shallow hot-springs-style mineralization, their young age may preclude exposure by erosion. Uplift along active normal faults has exposed some deposits (e.g., Florida Canyon, Dixie Comstock, Wind Mountain), but in other areas, such as the Walker Lane, where strike-slip faulting is prevalent, the opportunities for exposure can be limited. Many active geothermal systems are also concealed below the surface in that hot springs or steam vents may be absent above areas of thermal groundwater. With sources of energy to support mine production becoming more problematic, the potential advantages of simultaneously exploring for young gold deposits and spatially associated geothermal systems are becoming more apparent. Exploration methods recently proven effective in geothermal exploration that can be adapted to gold exploration include temperature surveys, hyperspectral remote sensing, geophysical surveys, water analyses, and detailed mapping of geothermal-related features and related fault systems.

Conference Paper↗
USGS2019

Scientific integrity issues in environmental toxicology and chemistry: Improving research transparency, reproducibility, and credibility

High‐profile reports of detrimental scientific practices leading to retractions in the scientific literature contribute to lack of trust in scientific experts. Although the bulk of these have been in the literature of other disciplines, environmental toxicology and chemistry are not free from problems. While we believe that egregious misconduct such as fraud, fabrication of data, or plagiarism is rare, scientific integrity is much broader than the absence of misconduct. We are more concerned with more commonly encountered and nuanced issues such as poor reliability and bias. We review a range of topics including conflicts of interests, competing interests, some particularly challenging situations, reproducibility, bias, and other attributes of ecotoxicological studies that enhance or detract from scientific credibility. Our vision of scientific integrity encourages a self‐correcting culture that promotes scientific rigor, relevant reproducible research, transparency in competing interests, methods and results, and education.

Integrated Environmental Assessment and Management↗