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USGS1998

Wetland connectivity and waterbird conservation in the western Great Basin of the United States: Introduction to workshop

As scientists, managers and landowners, we have come to realize that to best understand the local and regional value of individual wetlands, we need to take a broad geographic, taxonomic, and management view. In December 1994, a symposium was held in Reno, Nevada that addressed this topic for shorebirds by bringing together researchers and managers from the Western Great Basin to discuss shorebird research and management in the region (Reed et al. 1997, International Wader Studies 9). In February 1998, a similar, but broader, symposium was held in Bend, Oregon that addressed wetland connectivity and waterbird conservation in the Western Great Basin. Over 100 participants spent one day listening to talks from waterbird researchers that focused on multi-scale habitat use and movements of birds in the region. From American Avocets Recurvirostra americana to White Pelicans Pelcanus erythrorhynchos we learned of phenomenal intra-season movements throughout the Basin and the value of collecting detailed data of this nature for representative waterbirds. We learned also about the National Shorebird Conservation Plan and spent the next day in discussion groups where future research and management priorities were outlined. These discussions were the first regional planning effort for the National Plan.

Great Basin↗

USGS2008

Historical Ground-Water Development in the Salinas Alluvial Fan Area, Salinas, Puerto Rico, 1900-2005

The Salinas alluvial fan area has historically been one of the most intensively used agricultural areas in the South Coastal Plain of Puerto Rico. Changes in agricultural practices and land use in the Salinas alluvial fan have also caused changes in the geographic distribution of ground-water withdrawals from the alluvial aquifer. As a result, the ground-water balance and ground-water flow pattern have changed throughout the years and may explain the presence of saline ground water along parts of the coast at present. By providing a reconstruction of historical ground-water development in the Salinas alluvial fan area, from the initial years of aquifer development at about 1900 to the most recent conditions existing in 2005, water resources managers and planners can use the results of the analysis for a more complete understanding of aquifer conditions especially pertaining to water quality. This study effort was conducted by the U.S. Geological Survey in cooperation with the Puerto Rico Department of Natural and Environmental Resources as a contribution in the management of the Jobos Bay National Estuarine Research Reserve. The study area encompasses about 20 mi2 (square miles) of the extensive South Coastal Plain alluvial aquifer system (fig. 1). The study area is bounded to the north by foothills of the Cordillera Central mountain chain, to the south by the Caribbean Sea, and to the east and west by the Rio Nigua de Salinas and the Quebrada Aguas Verdes, respectively. Fan-delta and alluvial deposits contain the principal aquifers in the study area.

Scientific Investigations Map↗

USGS2012

Hydrologic and landscape database for the Cache and White River National Wildlife Refuges and contributing watersheds in Arkansas, Missouri, and Oklahoma

A hydrologic and landscape database was developed by the U.S. Geological Survey, in cooperation with the U.S. Fish and Wildlife Service, for the Cache River and White River National Wildlife Refuges and their contributing watersheds in Arkansas, Missouri, and Oklahoma. The database is composed of a set of ASCII files, Microsoft Access® files, Microsoft Excel® files, an Environmental Systems Research Institute (ESRI) ArcGIS® geodatabase, ESRI ArcGRID® raster datasets, and an ESRI ArcReader® published map. The database was developed as an assessment and evaluation tool to use in examining refuge-specific hydrologic patterns and trends as related to water availability for refuge ecosystems, habitats, and target species; and includes hydrologic time-series data, statistics, and hydroecological metrics that can be used to assess refuge hydrologic conditions and the availability of aquatic and riparian habitat. Landscape data that describe the refuge physiographic setting and the locations of hydrologic-data collection stations are also included in the database. Categories of landscape data include land cover, soil hydrologic characteristics, physiographic features, geographic and hydrographic boundaries, hydrographic features, regional runoff estimates, and gaging-station locations. The database geographic extent covers three hydrologic subregions—the Lower Mississippi–St Francis (0802), the Upper White (1101), and the Lower Arkansas (1111)—within which human activities, climatic variation, and hydrologic processes can potentially affect the hydrologic regime of the refuges and adjacent areas. Database construction has been automated to facilitate periodic updates with new data. The database report (1) serves as a user guide for the database, (2) describes the data-collection, data-reduction, and data-analysis methods used to construct the database, (3) provides a statistical and graphical description of the database, and (4) provides detailed information on the development of analytical techniques designed to assess water availability for ecological needs.

Arkansas;Missouri;Oklahoma↗

USGS1998

Satellite telemetry: A new tool for wildlife research and management

The U.S. Fish and Wildlife Service and the Alaska Department of Fish and Game have cooperated since 1984 to develop and evaluate satellite telemetry as a means of overcoming the high costs and logistical problems of conventional VHF (very high frequency) radiotelemetry systems. Detailed locational and behavioral data on caribou ( Rangifer tarandus ), polar bears ( Ursus maritimus ), and other large mammals in Alaska have been obtained using the Argos Data Collection and Location System (DCLS). The Argos system, a cooperative project of the Centre National d'Études Spatiales of France, the National Oceanic and Atmospheric Administration, and the National Aeronautics and Space Administration, is designed to acquire environmental data on a routine basis from anywhere on earth. Transmitters weighing 1.6-2.0 kg and functioning approximately 12-18 months operated on a frequency of 401.650 MHz. Signals from the transmitters were received by Argos DCLS instruments aboard two Tiros-N weather satellites in sun-synchronous, nearpolar orbits. Data from the satellites were received at tracking stations, transferred to processing centers in Maryland and France, and made available to users via computer tape, printouts, or telephone links. During 1985 and 1986, more than 25,000 locations and an additional 28,000 sets of sensor data (transmitter temperature and short-term and long-term indices of animal activity) were acquired for caribou and polar bears. Locations were calculated from the Doppler shift in the transmitted signal as the satellite approached and then moved away from the transmitter. The mean locational error for transmitters at known locations (n - 1,265) was 829 m; 90% of the calculated locations were within 1,700 m of the true location. Caribou transmitters provided a mean of 3.1 (+5.0. SD) locations per day during 6h of daily operation, and polar bear transmitters provided 1.7 (+6.9SD) locations during 12h of operation every third day. During the first 6 months of operation, the UHF (ultra-high frequency) signal failed on three of 32 caribou transmitters and 10 of 36 polar bear transmitters. A geographic information system (GIS) incorporating other databases (e.g., land cover, elevation, slope, aspect, hydrology, ice distribution) was used to analyze and display detailed locational and behavioral data collected via satellite. Examples of GIS applications to research projects using satellite telemetry and examples of detailed movement patterns of caribou and polar bears are presented. This report includes documentation for computer software packages for processing Argos data and presents developments, as of March 1987, in transmitter design, data retrieval using a local user terminal, computer software, and sensor development and calibration.

Resource Publication↗

USGS2017

An open source high-performance solution to extract surface water drainage networks from diverse terrain conditions

This paper describes a workflow for automating the extraction of elevation-derived stream lines using open source tools with parallel computing support and testing the effectiveness of procedures in various terrain conditions within the conterminous United States. Drainage networks are extracted from the US Geological Survey 1/3 arc-second 3D Elevation Program elevation data having a nominal cell size of 10 m. This research demonstrates the utility of open source tools with parallel computing support for extracting connected drainage network patterns and handling depressions in 30 subbasins distributed across humid, dry, and transitional climate regions and in terrain conditions exhibiting a range of slopes. Special attention is given to low-slope terrain, where network connectivity is preserved by generating synthetic stream channels through lake and waterbody polygons. Conflation analysis compares the extracted streams with a 1:24,000-scale National Hydrography Dataset flowline network and shows that similarities are greatest for second- and higher-order tributaries.

Cartography and Geographic Information Science↗

USGS2019

Pallid sturgeon basin-wide contaminants assessment

Pallid sturgeon (Scaphirhynchus albus), listed as endangered in 1990 under the federal Endangered Species Act (United States Fish and Wildlife Service (USFWS), 1990), have declined due to habitat loss, commercial fishing, and hybridization. Pollution in the Missouri and Mississippi Rivers has to-date only received minor attention as a factor in the on-going decline of wild pallid sturgeon populations (Jacobson et al. 2016a; Bergman 2008). Pallid sturgeon experts and contaminant specialists conceived of the Pallid Sturgeon Basin-Wide Contaminants Assessment (Assessment) to identify potentially harmful contaminants (contaminants of concern), their distribution within pallid sturgeon habitat, and their effects on pallid sturgeon at the landscape level. Extant water quality and analytical chemistry data from samples of river water, sediment, and sturgeon tissues from past studies, assessments, or monitoring activities throughout the species’ range were used to establish a list of contaminants. The list includes: metal and non-metal elements, pesticides, organic industrial chemicals, hormones, nutrients, and other potential water quality contaminants. Environmental samples collected from January 1, 2001 through December 31, 2014, when available, were used for all evaluations. This report is effectively a screening level hazard assessment whereby contituents of concern that may pose a potential harm to pallid sturgeon have been identified. These constituents of concern warrant further examination to determine the level of risk they pose to pallid sturgeon. The Assessment process was one of comparing the existing environmental data for individual constituents to reference values for adverse effects on fish specifically or aquatic life generally. The product of the Assessment is a simplified summary that is geographically organized by pallid sturgeon management unit that generally categorizes each individual contaminant or water quality constituent according to operationally defined levels of concern. This hazard assessment identifies potential constituents of concern to pallid sturgeon and may support prioritization for future data collection and research to enable a quantitative risk assessment. Regional data density at spatial and temporal scales notwithstanding, the Assessment points to some generalities in contaminant concerns within and across management units. Metals but not pesticides are the predominant contaminant of concern in the Great Plains Management Unit (GPMU). In the Central Lowlands Management Unit (CLMU), selenium exceeds benchmark levels. Triazine herbicides are potentially of concern in all but the GPMU. Concentrations of legacy contaminants such as PCBs and DDT and its metabolites exceeded benchmarks in samples from the CLMU, Interior Highlands Mangement Unit (IHMU), and Coastal Plains Management Unit (CPMU), but local and national trends indicate environmental levels of these contaminants continue to decline. Observed concentrations of nutrients and indicators of nutrient pollution were above benchmark levels throughout the pallid sturgeon’s range; however, the significance for pallid sturgeon health specifically is unknown. Almost no information exists on contemporary contaminants of concern such as the natural and synthetic estrogens (estradiol, ethinyl estradiol, and estrone) or polybrominated diphenyls (PBDEs). There are considerable informational data gaps for contaminants throughout the species’ range. Water quality measurements were the most frequent data encountered whereas, sediment and tissue data were orders of magnitude less frequent. The paucity of sediment and tissue concentrations, particularly the latter, prevents any meaningful conclusions regarding adverse effects of these contaminants on the growth and reproduction of pallid sturgeon. However, the Assessment could form the basis for regional workshops with subject matter specialists to develop plans to evaluate the contaminants most likely to affect pallid sturgeon health.

Missouri River basin, Mississippi River basin↗

USGS2023

National-scale assessment of total gaseous mercury isotopes across the United States

With the 2011 promulgation of the Mercury and Air Toxics Standards by the U.S. Environmental Protection Agency, and the successful negotiation by the United Nations Environment Program of the Minamata Convention, emissions of mercury (Hg) have declined in the United States. While the declines in atmospheric Hg concentrations in North America are encouraging, linking the declines to changing domestic and global source portfolios remains challenging. To address these research gaps, the U.S. Geological Survey initiated the first national-scale effort to establish a baseline of total gaseous mercury stable isotope values at 31 sites distributed across the United States. Results indicated that unique Hg sources, such as Hg evasion from an elemental Hg contaminated site or free tropospheric intrusions in high altitude sites, were distinguishable from background atmospheric values. Minor gradients were observed across the nation, with regions of heavy industrial activity demonstrating lower δ 202 Hg, but no consistent changes in other isotopes such as Δ 199 Hg and Δ 200 Hg were observed. Furthermore, δ 202 Hg was impacted by foliar uptake and senescence but trends varied between forested regions in the northeastern and midwestern United States. These data demonstrate regional emission sources and other environmental variables can impact total gaseous Hg (TGM) isotope values, highlighting the need to characterize atmospheric Hg isotopes over larger geographical areas to evaluate changes related to national and international Hg regulations.

JGR Atmospheres↗

USGS2008

The Landslide Handbook - A Guide to Understanding Landslides

This handbook is intended to be a resource for people affected by landslides to acquire further knowledge, especially about the conditions that are unique to their neighborhoods and communities. Considerable literature and research are available concerning landslides, but unfortunately little of it is synthesized and integrated to address the geographically unique geologic and climatic conditions around the globe. Landslides occur throughout the world, under all climatic conditions and terrains, cost billions in monetary losses, and are responsible for thousands of deaths and injuries each year. Often, they cause long-term economic disruption, population displacement, and negative effects on the natural environment. Outdated land-use policies may not always reflect the best planning for use of land that is vulnerable to landslides. The reasons for poor or nonexistent land-use policies that minimize the perceived or actual danger and damage potential from geologic hazards are many and encompass the political, cultural, and financial complexities and intricacies of communities. Landslides often are characterized as local problems, but their effects and costs frequently cross local jurisdictions and may become State or Provincial or national problems. Growing populations may be limited in their geographic expansion, except to occupy unstable, steep, or remote areas. Often, stabilizing landslide-scarred areas is too costly, and some inhabitants have no other places to relocate. Fortunately, simple, 'low-tech' precautions and actions can be adopted to at least ensure an individual's immediate safety, and this handbook gives a brief overview of many of these options. We strongly suggest that, where possible, the assistance of professional engineers/geologists or those experienced in the successful mitigation of unstable slopes be consulted before actions are taken. This handbook helps homeowners, community and emergency managers, and decisionmakers to take the positive step of encouraging awareness of available options and recourse in regard to landslide hazard. We provide a list of references, available in print or on the World Wide Web (Internet), that can be used for further knowledge about landslides. We recommend this handbook to managers and decisionmakers in communities in the hope that the information will be disseminated by such officials to other members of those communities. In response to the differing levels of literacy around the globe, we have emphasized visual information through the use of photographs and graphics. We plan to translate the handbook into additional languages as funding permits to further facilitate its use. We welcome comments and critiques and have provided our contact information and the names and addresses of our respective agencies.

Circular↗

USGS2000

Arsenic in Ground-Water Resources of the United States

Arsenic is a naturally occurring element in rocks, soils, and the waters in contact with them. Recognized as a toxic element for centuries, arsenic today also is a human health concern because it can contribute to skin, bladder, and other cancers (National Research Council, 1999). Recently, the National Research Council (1999) recommended lowering the current maximum contaminant level (MCL) allowed for arsenic in drinking water of 50 ?g/L (micrograms per liter), citing risks for developing bladder and other cancers. The U.S. Environmental Protection Agency (USEPA) will propose a new, and likely lower, arsenic MCL during 2000 (U.S. Environmental Protection Agency, 2000). This fact sheet provides information on where and to what extent natural concentrations of arsenic in ground water exceed possible new standards. The U.S. Geological Survey (USGS) has collected and analyzed arsenic in potable (drinkable) water from 18,850 wells in 595 counties across the United States during the past two decades. These wells are used for irrigation, industrial purposes, and research, as well as for public and private water supply. Arsenic concentrations in samples from these wells are similar to those found in nearby public supplies (see Focazio and others, 1999). The large number of samples, broad geographic coverage, and consistency of methods produce a more accurate and detailed picture of arsenic concentrations than provided by any previous studies.

Fact Sheet↗

USGS2002

National Civil Applications Program

The National Civil Applications Program (NCAP) is a component of the U.S. Geological Survey's (USGS) Mapping, Remote Sensing, and Geographic Investigations Program. The NCAP serves Federal civil agencies by providing for the acquisition, dissemination, and exploitation of classified remote sensing systems and data in support of mission responsibilities for land and resource management, environmental and scientific studies, homeland security, and hazards/disaster management. Civil applications of classified remotely sensed imagery began in 1969 when the USGS provided Federal civil agencies with access to imagery for various uses, including mapping, charting, geodesy, and management of the Nation's lands and resources. The Civil Applications Committee (CAC) was established in 1975 to provide oversight and coordination of these activities. The CAC is composed of 11 Federal departments and independent agencies. The USGS, through the Secretary of the Interior, is delegated responsibility to chair the CAC. The use of classified remotely sensed data has increased dramatically over the past 10 years. There has been an expanded emphasis on using data for environmental monitoring and research and for hazards detection, warning, and emergency response. To address the growing requirements and better serve the Federal civil community, the USGS expanded its investment in NCAP facilities and infrastructure during the 1990s. The USGS Advanced Systems Center (ASC) in Reston, Va., was built in 1993 and serves as the hub of NCAP operations. The USGS operates regional facilities in Denver, Colo.; Rolla, Mo.; Sioux Falls, S. Dak.; and Menlo Park, Calif. An interagency NCAP facility is located in Anchorage, Alaska. Each USGS facility provides the infrastructure, systems, and expertise required to support the growing diversity of civil applications.

Fact Sheet↗

USGS1993

The Pajarito Plateau: A bibliography

This bibliography is the result of two initially independent projects. As the consulting archaeologist at Los Alamos National Laboratory (LANL), Charlie R. Steen collected entries at the suggestion of the staff of the Environmental Surveillance Group of the Health, Safety, and Environmental Division, HSE-8. The primary purpose was to aid the staff in evaluating cultural resources on LANL lands. In addition to works that related to the archaeology and history of the area, Steen included notations of a few books and articles in other fields such as geology and natural history. It was hoped that they also would be of value to other organizations and to students of past human activities on the Pajarito Plateau. At the same time, the National Park Service (NPS) was planning a major survey of Bandelier National Monument (BNM). As part of this plan, the author was asked to prepare a background document that described research previously carried out in the area, including an annotated bibliography. Although the survey would be limited to the park boundaries, the larger Pajarito Plateau is a more logical study area from physiographic, environmental, and cultural perspectives; hence the focus was on this larger region. Mathien (1986) also included some references to natural resources studies, particularly those initiated by NPS within Bandelier National Monument. Both bibliographies were made available to Colleen Olinger and Beverly Larson of the Health and Environmental Services Group at Los Alamos. They realized that while neither was complete, each included entries missing from the other. Larson suggested the two bibliographies be combined. (At this time, Craig Allen was studying the landscape of the Jemez Mountains [Allen 1984c, 1989]. His investigations included much detailed information on natural resource studies and were added in 1991 and 1992.) To limit the scope of their work, Steen and Mathien had chosen their parameter: the Pajarito Plateau. Geographically, the Pajarito Plateau is described as the high tableland that lies between the Jemez Mountains on the west and the Rio Grande on the east. From north to south, it extends from the Chama Valley to La Cañada de Cochiti (Hewett 1906:14)(Figure 1). Because human activity rarely stops at such definite boundaries, major ethnographic studies of Tewa (San Ildefonso and Santa Clara) and Keres (Cochiti) linguistic groups are included. (Even though most of the historic pueblos occupied by the Tewa and Keres are not located on the Pajarito Plateau, oral traditions and archaeological data suggest that these groups once occupied sites on the plateau.) Towa studies are not included because Steen believed Towa ancestors were not involved in major cultural developments of the Pajarito Plateau. In addition, a bibliography of the Jemez area (home of Towa people) has been prepared by Michael Elliott (1982) and included with his nomination of large Pueblo sites near Jemez Springs to the National Register of Historic Places that is on file at the Museum of New Mexico, Laboratory of Anthropology, in Santa Fe. Both Steen and Mathien included references to geographically and historically related material that does not focus on the Pajarito Plateau but, nonetheless, is important to understanding the area's archaeology and physical environment, for example, lithic resources available from Cerro Pedernal or in the Sangre de Cristo Mountains.

New Mexico↗

USGS2014

Large scale Wyoming transportation data: a resource planning tool

The U.S. Geological Survey Fort Collins Science Center created statewide roads data for the Bureau of Land Management Wyoming State Office using 2009 aerial photography from the National Agriculture Imagery Program. The updated roads data resolves known concerns of omission, commission, and inconsistent representation of map scale, attribution, and ground reference dates which were present in the original source data. To ensure a systematic and repeatable approach of capturing roads on the landscape using on-screen digitizing from true color National Agriculture Imagery Program imagery, we developed a photogrammetry key and quality assurance/quality control protocols. Therefore, the updated statewide roads data will support the Bureau of Land Management’s resource management requirements with a standardized map product representing 2009 ground conditions. The updated Geographic Information System roads data set product, represented at 1:4,000 and +/- 10 meters spatial accuracy, contains 425,275 kilometers within eight attribute classes. The quality control of these products indicated a 97.7 percent accuracy of aspatial information and 98.0 percent accuracy of spatial locations. Approximately 48 percent of the updated roads data was corrected for spatial errors of greater than 1 meter relative to the pre-existing road data. Twenty-six percent of the updated roads involved correcting spatial errors of greater than 5 meters and 17 percent of the updated roads involved correcting spatial errors of greater than 9 meters. The Bureau of Land Management, other land managers, and researchers can use these new statewide roads data set products to support important studies and management decisions regarding land use changes, transportation and planning needs, transportation safety, wildlife applications, and other studies.

Wyoming↗

USGS2019

Chronic wasting disease—Research by the U.S. Geological Survey and partners

Introduction Chronic wasting disease (CWD) is the only transmissible spongiform encephalopathy, a class of invariably fatal neurodegenerative mammalian diseases associated with a misfolded cellular prion protein found in wild free-ranging animals. Because it has a long incubation period, affected animals in Cervidae (the deer family; referred to as “cervids”) may not show signs of disease for several years. While signs are not specific to CWD, affected cervids (deer, elk, moose, and reindeer) show changes in appearance (such as progressive weight loss) and changes in behavior such as stumbling, tremors, and teeth grinding. CWD can be transmitted by direct contact or through a contaminated environment. The causative prion agent is highly resistant to degradation. In recent decades, CWD has transitioned from a novel, obscure prion disease of cervids with limited geographical distribution, to a disease that poses substantial ecological, agricultural, and economic risks across large regions of North America. Since its discovery in free-ranging elk and deer populations in the western United States in the 1980s, CWD has been reported in captive or free-ranging cervid populations in 26 States, 3 Canadian Provinces, the Republic of South Korea, Finland, Sweden, and Norway. In addition, the proportion of CWD-infected animals is increasing in many areas where the disease is already established. In some heavily affected areas, total cervid numbers have decreased over time due to CWD, which suggests that these cervid populations may not be sustainable in the long-term. The U.S. Geological Survey (USGS) conducts wildlife disease surveillance and research to support management of CWD-affected species and their habitats. The scientific information is relevant to governmental agencies that manage wildlife and their habitats including the U.S. Fish and Wildlife Service, the National Park Service, the U.S. Department of Agriculture, and other Federal, State, and Tribal agencies as well as conservation partners (non-governmental organizations, businesses, and private landowners). Each project description in this report (1–30) includes the non-USGS collaborators (Federal, State, Tribal agencies, universities) and a USGS point of contact (principal investigator). If there are USGS publications associated with the project, a publication list is provided at the end of each project description.

Alberta, California, Colorado, Idaho, Iowa, Kansas↗

USGS2019

The integrated monarch monitoring program: From design to implementation

Steep declines in North American monarch butterfly ( Danaus plexippus ) populations have prompted continent-wide conservation efforts. While monarch monitoring efforts have existed for years, we lack a comprehensive approach to monitoring population vital rates integrated with habitat quality to inform adaptive management and effective conservation strategies. Building a geographically and ecologically representative dataset of monarchs and their habitat will improve these efforts. These data will help track long-term changes in the distribution and abundance of monarchs and their habitats, refine population and habitat models, and illuminate how conservation activities affect monarchs and their habitats. The Monarch Conservation Science Partnership developed the Integrated Monarch Monitoring Program (IMMP) to profile breeding habitats and their use by monarchs in North America. A spatially balanced random sampling framework guides site selection, while also allowing opportunistic inclusion of sites chosen by participants, such as conservation areas. The IMMP weaves new protocols together with those from existing monitoring programs to improve data compatibility for assessing milkweed (Asclepias spp.) density, nectar resources, monarch reproduction and survival, and adult monarch habitat use. Participants may select a protocol subset according to interests or local monitoring objectives, thereby maximizing contributions. Conservation partners, including public and private land managers, academic researchers, and citizen scientists contribute data to a national dataset available for analyses at multiple scales. We describe the program and its development, implementation elements that make the program robust and feasible, participation to date, and how IMMP data can advance research and conservation for monarchs, pollinators, and their habitats.

North America↗

USGS2006

High-resolution geologic mapping of the inner continental shelf: Boston Harbor and approaches, Massachusetts

This report presents the surficial geologic framework data and information for the sea floor of Boston Harbor and Approaches, Massachusetts (fig. 1.1). This mapping was conducted as part of a cooperative program between the U.S. Geological Survey (USGS), the Massachusetts Office of Coastal Zone Management (CZM), and the National Oceanic and Atmospheric Administration (NOAA). The primary objective of this project was to provide sea floor geologic information and maps of Boston Harbor to aid resource management, scientific research, industry and the public. A secondary objective was to test the feasibility of using NOAA hydrographic survey data, normally collected to update navigation charts, to create maps of the sea floor suitable for geologic and habitat interpretations. Defining sea-floor geology is the first steps toward managing ocean resources and assessing environmental changes due to natural or human activity. The geophysical data for these maps were collected as part of hydrographic surveys carried out by NOAA in 2000 and 2001 (fig. 1.2). Bottom photographs, video, and samples of the sediments were collected in September 2004 to help in the interpretation of the geophysical data. Included in this report are high-resolution maps of the sea floor, at a scale of 1:25,000; the data used to create these maps in Geographic Information Systems (GIS) format; a GIS project; and a gallery of photographs of the sea floor. Companion maps of sea floor to the north Boston Harbor and Approaches are presented by Barnhardt and others (2006) and to the east by Butman and others (2003a,b,c). See Butman and others (2004) for a map of Massachusetts Bay at a scale of 1:125,000. The sections of this report are listed in the navigation bar along the left-hand margin of this page. Section 1 (this section) introduces the report. Section 2 presents the large-format map sheets. Section 3 describes data collection, processing, and analysis. Section 4 summarizes the geologic history of the region and discusses geomorphic and anthropogenic features within the study area. Section 4 also provides references that contain additional information about the region. Appendix 1 provides GIS layers of all the data collected in this study, Appendix 2 contains the grain size textural analyses of sediment samples, and Appendix 3 contains bottom photographs of the sea floor in JPG format.

Massaachusetts↗

USGS2021

A novel automatic phenology learning (APL) method of training sample selection using multiple datasets for time-series land cover mapping

The long record of Landsat imagery, which is the cornerstone of Earth observation, provides an opportunity to monitor land use and land cover (LULC) change and understand the interactions between the climate and earth system through time. A few change detection algorithms such as Continuous Change Detection and Classification (CCDC) have been developed to utilize all available Landsat images for change detection and characterization at local or global scales. However, the reliable, rapid, and reproducible collection of training samples have become a challenge for time series land cover classification at a large scale. To meet the challenge, we proposed an automatic phenology learning (APL) method with the assumption that the temporal profiles of samples within the same land cover type are the same or similar at a local scale to generate evenly distributed training samples automatically. We designed the method to build land cover patterns for each category based on consensus samples derived from multiple existing scientific datasets including LANDFIRE's (LF) Existing Vegetation Type (EVT), USGS National Land Cover Database (NLCD), National Agricultural Statistics Service (NASS) Cropland Data Layer (CDL), and National Wetlands Inventory (NWI). Then we calculated the Time-Weighted Dynamic Time Warping (twDTW) distance between any undefined samples and land cover patterns in the same geographical region as prior knowledge. Finally, we selected the optimal land cover category for each undefined sample from the land cover products based on the designed criteria iteratively using the twDTW distance as an indicator. The method was applied in the footprint of 10 selected Landsat Analysis Ready Data (ARD) tiles in the eastern and western conterminous United States (CONUS) to produce annual land cover maps from 1985 to 2017. The accuracy assessment and visual comparison revealed that the APL method can generate reliable training samples without any manual interpretation, producing better land cover results especially for the grass/shrub and wetland land cover classes. Applying the APL method, the overall accuracy of the annual land cover maps was improved by 2% over the accuracy of Land Change Monitoring, Assessment, and Projection (LCMAP) Collection 1.0 Science Products in the research regions. Our results also indicate that the APL method provides an approach for best use of different land cover products and meets the requirement of intensive sampling for training data collection.

Remote Sensing of Environment↗

USGS2023

Skinks of Oceania, New Guinea, and Eastern Wallacea: An underexplored biodiversity hotspot

Context: Skinks comprise the dominant component of the terrestrial vertebrate fauna in Oceania, New Guinea, and Eastern Wallacea (ONGEW). However, knowledge of their diversity is incomplete, and their conservation needs are poorly understood. Aims: To explore the diversity and threat status of the skinks of ONGEW and identify knowledge gaps and conservation needs. Methods: We compiled a list of all skink species occurring in the region and their threat categories designated by the International Union for Conservation of Nature. We used available genetic sequences deposited in the National Center for Biotechnology Information’s GenBank to generate a phylogeny of the region’s skinks. We then assessed their diversity within geographical sub-divisions and compared to other reptile taxa in the region. Key results: Approximately 300 species of skinks occur in ONGEW, making it the second largest global hotspot of skink diversity following Australia. Many phylogenetic relationships remain unresolved, and many species and genera are in need of taxonomic revision. One in five species are threatened with extinction, a higher proportion than almost all reptile families in the region. Conclusions: ONGEW contain a large proportion of global skink diversity on <1% of the Earth’s landmass. Many are endemic and face risks such as habitat loss and invasive predators. Yet, little is known about them, and many species require taxonomic revision and threat level re-assessment. Implications: The skinks of ONGEW are a diverse yet underexplored group of terrestrial vertebrates, with many species likely facing extreme risks in the near future. Further research is needed to understand the threats they face and how to protect them.

Pacific Conservation Biology↗

USGS2016

Ecoregions of California

Ecoregions denote areas of general similarity in ecosystems and in the type, quality, and quantity of environmental resources. They are designed to serve as a spatial framework for the research, assessment, management, and monitoring of ecosystems and ecosystem components. By recognizing the spatial differences in the capacities and potentials of ecosystems, ecoregions stratify the environment by its probable response to disturbance (Bryce and others, 1999). These general purpose regions are critical for structuring and implementing ecosystem management strategies across Federal agencies, State agencies, and nongovernment organizations that are responsible for different types of resources in the same geographical areas (Omernik and others, 2000). The approach used to compile this map is based on the premise that ecological regions are hierarchical and can be identified through the analysis of the spatial patterns and the composition of biotic and abiotic phenomena that affect or reflect differences in ecosystem quality and integrity (Wiken, 1986; Omernik, 1987, 1995). These phenomena include geology, physiography, vegetation, climate, soils, land use, wildlife, and hydrology. The relative importance of each characteristic varies from one ecological region to another regardless of the hierarchical level. A Roman numeral hierarchical scheme has been adopted for different levels of ecological regions. Level I is the coarsest level, dividing North America into 15 ecological regions. Level II divides the continent into 50 regions (Commission for Environmental Cooperation Working Group, 1997, map revised 2006). At level III, the continental United States contains 105 ecoregions and the conterminous United States has 85 ecoregions (U.S. Environmental Protection Agency, 2013). Level IV, depicted here for California, is a further refinement of level III ecoregions. Explanations of the methods used to define these ecoregions are given in Omernik (1995), Omernik and others (2000), and Omernik and Griffith (2014). California has great ecological and biological diversity. The State contains offshore islands and coastal lowlands, large alluvial valleys, forested mountain ranges, deserts, and various aquatic habitats. There are 13 level III ecoregions and 177 level IV ecoregions in California and most continue into ecologically similar parts of adjacent States of the United States or Mexico (Bryce and others, 2003; Thorson and others, 2003; Griffith and others, 2014). The California ecoregion map was compiled at a scale of 1:250,000. It revises and subdivides an earlier national ecoregion map that was originally compiled at a smaller scale (Omernik, 1987; U.S. Environmental Protection Agency, 2013). This poster is the result of a collaborative project primarily between U.S. Environmental Protection Agency (USEPA) Region IX, USEPA National Health and Environmental Effects Research Laboratory (Corvallis, Oregon), California Department of Fish and Wildlife (DFW), U.S. Department of Agriculture (USDA)–Natural Resources Conservation Service (NRCS), U.S. Department of the Interior–Geological Survey (USGS), and other State of California agencies and universities. The project is associated with interagency efforts to develop a common framework of ecological regions (McMahon and others, 2001). Reaching that objective requires recognition of the differences in the conceptual approaches and mapping methodologies applied to develop the most common ecoregion-type frameworks, including those developed by the USDA–Forest Service (Bailey and others, 1994; Miles and Goudy, 1997; Cleland and others, 2007), the USEPA (Omernik 1987, 1995), and the NRCS (U.S. Department of Agriculture–Soil Conservation Service, 1981; U.S. Department of Agriculture–Natural Resources Conservation Service, 2006). As each of these frameworks is further refined, their differences are becoming less discernible. Regional collaborative projects such as this one in California, where some agreement has been reached among multiple resource-management agencies, are a step toward attaining consensus and consistency in ecoregion frameworks for the entire nation.

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