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Hyperspectral remote sensing of vegetation

Hyperspectral narrow-band (or imaging spectroscopy) spectral data are fast emerging as practical solutions in modeling and mapping vegetation. Recent research has demonstrated the advances in and merit of hyperspectral data in a range of applications including quantifying agricultural crops, modeling forest canopy biochemical properties, detecting crop stress and disease, mapping leaf chlorophyll content as it influences crop production, identifying plants affected by contaminants such as arsenic, demonstrating sensitivity to plant nitrogen content, classifying vegetation species and type, characterizing wetlands, and mapping invasive species. The need for significant improvements in quantifying, modeling, and mapping plant chemical, physical, and water properties is more critical than ever before to reduce uncertainties in our understanding of the Earth and to better sustain it. There is also a need for a synthesis of the vast knowledge spread throughout the literature from more than 40 years of research.

Book

Scenario projections of COVID-19 burden in the US, 2024-2025

Importance COVID-19 remains a disease with high burden in the US, prompting continued debate about optimal targets for annual vaccination. Objective To project COVID-19 burden in the US for April 2024 to April 2025 under 6 scenarios of immune escape (20% and 50% per year) and levels of vaccine recommendation (no recommendation, vaccination for individuals at high risk only, vaccination for all eligible groups) and to assess the potential benefit of vaccine recommendations in reducing disease burden. Design, Setting, and Participants For this decision analytical model, the US Scenario Modeling Hub, a collaborative modeling effort, convened 9 teams to provide scenario projections of US COVID-19 hospitalizations and deaths for April 2024 to April 2025, under 6 scenarios combining levels of immune escape and possible vaccine recommendations. Exposure Annually reformulated vaccines were assumed to be 75% effective against hospitalization for variants circulating on June 15, 2024, and available on September 1, 2024. Age- and state-specific coverage was assumed to be as reported in September 2023 to April 2024. Main Outcomes and Measures Ensemble estimates were made for weekly COVID-19 hospitalizations and deaths. Projections are presented for relative and absolute prevented hospitalizations and deaths averted due to vaccination over the April 2024 to April 2025 period. Results For the US population (332 million, with an estimated 58 million aged ≥65 years), COVID-19 was expected to cause 814 000 (95% projection interval [PI], 400 000-1.2 million) hospitalizations and 54 000 (95% PI, 17 000-98 000) deaths for April 2024 to April 2025, comparable in magnitude to the prior year. Vaccination of high-risk groups only was projected to reduce hospitalizations (compared to no vaccination recommendation) by 76 000 (95% CI, 34 000-118 000) and deaths by 7000 (95% CI, 3000-11 000) across both immune escape scenarios. Compared with vaccinating high-risk groups only, a universal vaccine recommendation was projected to provide direct and indirect benefits, further preventing 11 000 hospitalizations and 1000 deaths in those aged 65 years and older. Conclusions and Relevance In this decision analytical modeling study of COVID-19 burden in the US in 2024 to 2025, ensemble projections suggested that although vaccinating high-risk groups had substantial benefits in reducing disease burden, maintaining the vaccine recommendation for all individuals had the potential to save thousands more lives. Despite divergence of projections from observed disease trends in 2024 to 2025—possibly driven by variant emergence patterns and immune escape—averted COVID-19 burden due to vaccination was robust across immune escape scenarios, emphasizing the substantial benefit of broader vaccine availability for all individuals.

JAMA Network Open

Variables affecting resource subsidies from streams and rivers to land and their susceptibility to global change stressors

Stream and river ecosystems provide subsidies of emergent adult aquatic insects and other resources to terrestrial food webs, and this lotic–land subsidy has garnered much attention in recent research. Here, we critically examine a list of biotic and abiotic variables—including productivity, dominant taxa, geomorphology, and weather—that should be important in affecting the nature of these subsidy dynamics between lotic and terrestrial ecosystems, especially the pathway from emergent aquatic insects to terrestrial predators. We also explore how interactions between these variables can lead to otherwise unexpected patterns in the importance of aquatic subsidies to terrestrial food webs. Utilizing a match-mismatch framework developed previously, we identify how these variables and interactions may be affected by a broad suite of stressors in addition to contaminants: climate change, land-use conversion, damming and water abstraction, and species invasions and extinctions. These stressors may all act to modify and potentially exacerbate the effects of contaminants on subsidies. The available literature on many variables is sparse, despite strong theoretical underpinnings supporting their importance for lotic–land subsidies. Notably, these understudied variables include those related to physical geomorphology and the structure of the stream/river and floodplain/riparian zone as well as species-specific interactions between aquatic and terrestrial organisms. We suggest that more explicit characterization of these variables and more research directly linking broad-scale stressors to subsidy resource–consumer interactions can help provide a more mechanistic understanding to lotic–land subsidy dynamics within a changing environment.

Book chapter

Toward salt marsh harvest mouse recovery: A review

The salt marsh harvest mouse (SMHM, Reithrodontomys raviventris ) is an endangered species, endemic to the San Francisco Estuary. Despite being protected for almost half a century and being included in a large number of recovery, restoration, and management plans, significant data gaps hinder conservation and management of the species, a challenge further complicated by developing threats such as climate change. In this review, we present the current state of knowledge; highlight research gaps on habitat requirements and distribution, taxonomic status and genetic structure, physiology, reproduction and demographics, population dynamics, and behavior and community interactions; and present an overview of threats to the species. Our review indicates that substantial data gaps exist; although some aspects of SMHM ecology, such as habitat use, have been addressed extensively, others, such as the effects of environmental contamination, are largely unaddressed. We suggest that conservation and restoration-planning processes consider experimental approaches within restoration designs to address these deficiencies. Continued investment in basic and applied SMHM ecology to collect baseline and long-term data will also be beneficial. Additionally, further coordination among managers and researchers can facilitate more effective responses to uncertainties and emerging threats, especially climate change, which threatens the SMHM and its habitat throughout its range.

San Francisco Estuary and Watershed Science

Hydrology and cycling of nitrogen and phosphorus in Little Bean Marsh: A remnant riparian wetland along the Missouri River in Platte County, Missouri, 1996–97

The lack of concurrent water-quality and hydrologic data on riparian wetlands in the Midwestern United States has resulted in a lack of knowledge about the water-quality functions that these wetlands provide. Therefore, Little Bean Marsh, a remnant riparian wetland along the Missouri River, was investigated in 1996 and 1997 primarily to determine the magnitude and character of selected water-quality benefits that can be produced in such a wetland and to identify critical processes that can be managed in remnant or restored riparian wetlands for amelioration of water quality. Little Bean Marsh averages 69 hectares in size, has a maximum depth of about 1 meter, and the majority of the marsh is covered by macrophytes. In 1997, 41 percent of the water received by Little Bean Marsh was from direct precipitation, 14 percent was from ground-water seepage, 30 percent from watershed runoff, and 15 percent was backflow from Bean Lake. Although, Little Bean Marsh was both a ground-water recharge and discharge area, discharge to the marsh was three times the recharge to ground water. Ground-water levels closely tracked marsh water levels indicating a strong hydraulic connection between ground water and the marsh. Reduced surface runoff and ground-water availability are stabilizing influences on marsh hydrology and probably contribute to the persistence of emergent vegetation. The rapid hydraulic connection between Little Bean Marsh and ground water indicates that the hydrologic regime of most wetlands along the lower Missouri River is largely a function of the altitude of the marsh bottom relative to the altitude of the water table. More water was lost from the marsh through evapotranspiration (59 percent) than all other pathways combined. This is partially because the transpiration process of abundant macrophytes can greatly contribute to the evapotranspiration above that lost from open water surfaces. Surface outflow accounted for 36 percent and ground-water seepage accounted for only 5 percent of the losses. Large residence times allows the marsh to greatly affect water quality before water escapes as ground-water recharge or surface outflow. The shallowness of Little Bean Marsh and ion exclusion during ice formation caused the highest specific conductances of 1,100 to 1,300 microsiemens per centimeter at 25 degrees Celsius to occur during the winter. This concentration of dissolved solutes under ice can make wetlands more vulnerable to toxic contaminants than deeper surface-water bodies. Dissolved oxygen was less than 5 mg/L (milligrams per liter) for 3 to 4 months and near 0 mg/L for about 1 month in summer. Despite depths of less than 1 meter, temperature stratification persisted more than 3 months during the summers of 1996 and 1997, preventing mixing and contributing to periods of anoxia. Shallow depths and extended periods of anoxia in the marsh limit the ability of some organisms to escape high-temperature stress. Turbidity in Little Bean Marsh usually was low for several reasons: sediment loadings from the largely flood-plain drainage were low, emergent vegetation shade out algae and shield the water from wind, and high concentrations of bivalent cations increase flocculation rates of inorganic suspended material. The high concentrations of bivalent cations was largely because of a substantial amount of ground-water seepage into the marsh. Dissolved organic nitrogen was the dominant nitrogen species in Little Bean Marsh. Denitrification and biotic uptake kept more than 62 percent of nitrate (NO3) and 43 percent of ammonium (NH4) concentrations in marsh samples less than a detection limit of 0.005 mg/L. This contrasts with the Missouri River where inorganic NO3 dominates. Consequently, artificial flood-plain drainage that bypasses riparian wetlands likely deliver substantially more biotically available inorganic nitrogen to receiving waters than surface water that has been routed through a remnant wetland. Average total nitrogen concentrations in Little Bean Marsh were substantially less than those at other Missouri River wetlands, roughly one-half the mean concentrations in the Missouri River, but roughly twice the average nitrogen values in reservoirs of the glaciated plains of Missouri. The largest concentrations of nearly all species of nitrogen and phosphorus and the most intense period of hypereutrophy coincided with a phytoplankton bloom and senescence of River Bulrush (Scirpus fluviatilis) and common cattail (Typha latifolia) in September 1997. The rapid leaching of nitrogen that occurs soon after macrophyte senescence combined with a recent destratification of the marsh probably provided nitrogen to the nitrogen-limited open-water areas and triggered a phytoplankton bloom. Despite the rarity of runoff events, surface runoff from the watershed, combined with atmospheric deposition, contributed more than seven times the 530 kg (kilograms) of nitrogen that escaped Little Bean Marsh in surface outflow during 1997. Atmospheric deposition alone was more than 530 kg. Seepage to ground water contained less than 1.5 percent of the nitrogen leaving the marsh in surface outflow. The slow decay rate of Scirpus fluviatilis and reducing conditions in bottom sediments make burial of organic nitrogen a substantial sink of nitrogen. Denitrification experiments indicate that denitrification rates were limited by NO3 in the water column. Consequently, decomposition and nitrification of NH4 and organic nitrogen are the rate limiting steps of nitrogen removal in Little Bean Marsh. The NO3-limited rates of denitrification also indicate that Little Bean Marsh has a large unused capacity for nitrogen removal. These data indicate that the vast extent of riparian marshes along the Missouri and Mississippi Rivers may have had a substantial role in limiting NO3 loads to the Gulf of Mexico before agricultural development of flood plains. Drainage and removal of riparian marshes may be a major cause of the increased NO3 loads to the Gulf of Mexico. Periods of anoxia had much larger effects on phosphorus release than the other variables. The largest concentrations of phosphorus occurred in late summer and corresponded with senescing macrophytes, periods of anoxia, and a large algal bloom in Little Bean Marsh. Low water levels prevented the escape of phosphorus in surface outflow during these periods of highest phosphorus concentrations. Dry weather in late summer is typical and probably makes the correspondence of low water levels, anoxia, and consequent low phosphorus release a common occurrence in marshes along the Missouri River. Little Bean Marsh retained more than 95 percent of the phosphorus it received. The amount of phosphorus in surface inflows to the marsh were more than one order of magnitude greater than that escaping in surface outflows. The long hydraulic residence time of the marsh and large contributions of iron from ground water (that provide many sorption sites for phosphorus) make the marsh an effective sediment and phosphorus trap.

Missouri

Juvenile frogs compensate for small metamorph size with terrestrial growth: Overcoming the effects of larval density and insecticide exposure

I reared four species of anurans ( Rana sphenocephala [Southern Leopard Frog], Rana blairi [Plains Leopard Frog], Rana clamitans [Green Frog], and Bufo woodhousii [Woodhouse's Toad]) for seven to 12 months in small, outdoor terrestrial enclosures (1 × 2 m) to examine the consequences of larval competition (via density) and contaminant exposure (via the insecticide carbaryl). I added six Rana clamitans , eight R ana sphenocephala , eight Rana blairi , and 10 Bufo woodhousii to terrestrial enclosures shortly after metamorphosis and recaptured them during the following spring. All anurans from low-density ponds were significantly larger than those from high-density ponds, but these size differences did not significantly affect survival to or size at spring emergence. However, R. sphenocephala , R. blairi , and R. clamitans that survived to spring had been larger at metamorphosis on average than those that did not survive; in contrast, B. woodhousii that survived the winter were smaller at metamorphosis on average than those that did not survive. Carbaryl exposure affected mass at metamorphosis of R. clamitans and B. woodhousii that were added to enclosures, but this difference disappeared or did not increase by spring emergence. Overall, exposure to carbaryl during the larval period did not have any apparent effects on survival or growth during the terrestrial phase. In my study, anurans were able to offset small size at metamorphosis with terrestrial growth, although there was a trend of reduced overwinter survival for ranid species that metamorphosed at a smaller size.

Journal of Herpetology

Use of thematic mapper imagery to assess water quality, trophic state, and macrophyte distributions in Massachusetts lakes

During the spring and summer of 1996, 1997, and 1998, measurements of phytoplankton- chlorophyll concentration, Secchi disk transparency, and color were made at 97 Massachusetts lakes within 24 hours of Landsat Thematic Mapper imaging of the lakes in an effort to assess water quality and trophic state. Spatial distributions of floating, emergent, and submerged macrophytes were mapped in 49 of the lakes at least once during the 3-year period. The maps were digitized and used to assign pixels in the thematic mapper images to one of four vegetation cover classes-open water, 1-50 percent floating-and-emergent-vegetation cover, 51-100 percent floating-and-emergent-vegetation cover, and submerged vegetation at any density. The field data were collected by teams of U.S. Geological Survey and Massachusetts Department of Environmental Management staff and by 76 volunteers. Side-by-side sampling by U.S. Geological Survey and volunteer field teams resulted in statistically similar chlorophyll determinations, Secchi disk readings, and temperature measurements, but concurrent color determinations were not similar, possibly due to contamination of sample bottles issued to the volunteers.Attempts to develop predictive relations between phytoplankton-chlorophyll concentration, Secchi disk transparency, lake color, dissolved organic carbon, and various combinations of thematic mapper bands 1, 2, 3, and 4 digital numbers were unsuccessful, primarily because of the extremely low concentrations of chlorophyll in the lakes studied, and also because of the highly variable dissolved organic carbon concentrations.Predictive relations were developed between Secchi disk transparency and phytoplankton-chlorophyll concentration, and between color and dissolved organic carbon concentration. Phytoplankton-chlorophyll concentration was inversely correlated with Secchi disk transparency during all three sampling periods. The relations were very similar in 1996 and 1997 and indicated that 62 to 67 percent of the variability in Secchi disk transparency could be explained by the chlorophyll concentration. Analysis of color and dissolved organic carbon concentrations in water samples collected by U.S. Geological Survey field teams in 1996-98 indicated that 91 percent of the variance in color in Massachusetts lakes can be explained by variations in dissolved organic carbon.Areas of open-water, submerged vegetation, and two surface-vegetation-cover classes predicted from Thematic Mapper images acquired in the summer of 1996 closely matched the areas observed in a set of field observations. However, the same analysis applied to a set of data acquired in the summer of 1997 resulted in somewhat less reliable predictions, and an attempt to predict 1996 vegetation-cover areas using the relations developed in the 1997 analysis was unsuccessful.

Water-Resources Investigations Report

Sulfide oxidation and distribution of metals near abandoned copper mines in coastal environments, Prince William Sound, Alaska, USA

The oxidation of sulfide-rich rocks, mostly leftover debris from Cu mining in the early 20th century, is contributing to metal contamination of local coastal environments in Prince William Sound, Alaska. Analyses of sulfide, water, sediment, precipitate and biological samples from the Beatson, Ellamar, and Threeman mine sites show that acidic surface waters generated from sulfide weathering are pathways for redistribution of environmentally important elements into and beyond the intertidal zone at each site. Volcanogenic massive sulfide deposits composed of pyrrhotite and (or) pyrite + chalcopyrite + sphalerite with subordinate galena, arsenopyrite, and cobaltite represent potent sources of Cu, Zn, Pb, As, Co, Cd, and Hg. The resistance to oxidation among the major sulfides increases in the order pyrrhotite ??? sphalerite < chalcopyrite ??? pyrite; thus, pyrrhotite-rich rocks are typically more oxidized than those dominated by pyrite. The pervasive alteration of pyrrhotite begins with rim replacement by marcasite followed by replacement of the core by sulfur, Fe sulfate, and Fe-Al sulfate. The oxidation of chalcopyrite and pyrite involves an encroachment by colloform Fe oxyhydroxides at grain margins and along crosscutting cracks that gradually consumes the entire grain. The complete oxidation of sulfide-rich samples results in a porous aggregate of goethite, lepidocrocite and amorphous Fe-oxyhydroxide enclosing hydrothermal and sedimentary silicates. An inverse correlation between pH and metal concentrations is evident in water data from all three sites. Among all waters sampled, pore waters from Ellamar beach gravels have the lowest pH (???3) and highest concentrations of base metals (to ???25,000 ??g/L), which result from oxidation of abundant sulfide-rich debris in the sediment. High levels of dissolved Hg (to 4100 ng/L) in the pore waters probably result from oxidation of sphalerite-rich rocks. The low-pH and high concentrations of dissolved Fe, Al, and SO4 are conducive to precipitation of interstitial jarosite in the intertidal gravels. Although pore waters from the intertidal zone at the Threeman mine site have circumneutral pH values, small amounts of dissolved Fe2+ in the pore waters are oxidized during mixing with seawater, resulting in precipitation of Fe-oxyhydroxide flocs along the beach-seawater interface. At the Beatson site, surface waters funneled through the underground mine workings and discharged across the waste dumps have near-neutral pH (6.7-7.3) and a relatively small base-metal load; however, these streams probably play a role in the physical transport of metalliferous particulates into intertidal and offshore areas during storm events. Somewhat more acidic fluids, to pH 5.3, occur in stagnant seeps and small streams emerging from the Beatson waste dumps. Amorphous Fe precipitates in stagnant waters at Beatson have high Cu (5.2 wt%) and Zn (2.3 wt%) concentrations that probably reflect adsorption onto the extremely high surface area of colloidal particles. Conversely, crystalline precipitates composed of ferrihydrite and schwertmannite that formed in the active flow of small streams have lower metal contents, which are attributed to their smaller surface area and, therefore, fewer reactive sorption sites. Seeps containing precipitates with high metal contents may contribute contaminants to the marine environment during storm-induced periods of high runoff. Preliminary chemical data for mussels (Mytilus edulis) collected from Beatson, Ellamar, and Threeman indicate that bioaccumulation of base metals is occurring in the marine environment at all three sites.

Applied Geochemistry

Emerging investigator series: Post-wildfire sediment geochemical characterization reveals manganese reactivity and a potential link to water quality impairment in the Gallinas Creek watershed, New Mexico

Water quality post-wildfire is often impaired by increased turbidity and elevated concentrations of elements such as manganese (Mn) and iron (Fe). Precipitation events exacerbate these issues, due in part to increased erosion and transport of sediment from hillslopes to surface water. Both Mn and Fe are major redox-active elements in sediments that drive a variety of biogeochemical cycles, precipitate adsorptive phases, and can themselves be drinking water contaminants. By investigating Mn and Fe sediment geochemistry in post-wildfire sediment deposits, related water quality hazards can be assessed. To establish and strengthen this connection, we analyzed the geochemistry of sediment deposits and surface water in the Gallinas Creek watershed, New Mexico over 1.5 years post-wildfire. Analyses included particle size analysis, water extractions, sequential extractions and aqua regia extractions to determine metal partitioning in sediment deposits. Data demonstrate Mn concentrations were distributed across labile and reactive fractions, such as the exchangeable and oxyhydroxide fractions, while Fe concentrations were mainly associated with the residual fraction. Manganese concentrations in aqua regia extractions and several fractions of sequential extractions were also strongly and significantly correlated with fine-grained sediment while the same pools of Fe concentrations were not. Dissolved Mn concentrations in surface water were elevated (>50 μg L −1 ) multiple times over the 1.5 years post-wildfire, highlighting a relationship between sediment geochemistry and water quality. This work shows Mn in sediments mobilized post-wildfire has an influence on water quality and highlights how further investigation into Mn sediment redox processes and mineralogy post-wildfire can inform risk assessments and resource management.

New Mexico

Mercury contamination from historic gold mining in California

Mercury contamination from historic gold mines represents a potential risk to human health and the environment. This fact sheet provides background information on the use of mercury in historic gold mining and processing operations in California, and describes a new USGS project that addresses the potential risks associated with mercury from these sources, with emphasis on historic hydraulic mining areas. Miners used mercury (quicksilver) to recover gold throughout the western United States at both placer (alluvial) and hardrock (lode) mines. The vast majority of mercury lost to the environment in California was from placer-goldmines, which used hydraulic, drift, and dredging methods. At hydraulic mines, placer ores were broken down with monitors (or water cannons, fig. 1) and the resulting slurry was directed throughsluices and drainage tunnels, where goldparticles combined with liquid mercury to form gold?mercury amalgam. Loss ofmercury in this process was 10 to 30 percent per season (Bowie, 1905), resulting in highly contaminated sediments at mine sites (fig. 2). Elevated mercury concentrations in present-day mine waters and sediments indicate thathundreds to thousands of pounds of mercury remain at each of the many sites affected by hydraulic mining. High mercury levels in fish, amphibians, and invertebrates downstream of the hydraulic mines are a consequence of historic mercury use. On the basis of USGS studies and other recent work, a better understanding is emerging of mercury distribution, ongoing transport, transformation processes, and the extent of biological uptake in areas affected by historic gold mining. This information will be useful to agencies responsible for prudent land and resource management and for protecting public health.

California

Temporal chemical data for sediment, water, and biological samples from the Lava Cap Mine Superfund site, Nevada County, California— 2006–2008

The Lava Cap Mine is located about 6 km east of the city of Grass Valley, Nevada County, California, at an elevation of about 900 m. Gold was hosted in quartz-carbonate veins typical of the Sierran Gold Belt, but the gold grain size was smaller and the abundance of sulfide minerals higher than in typical deposits. The vein system was discovered in 1860, but production was sporadic until the 1930s when two smaller operations on the site were consolidated, a flotation mill was built, and a 100-foot deep adit was driven to facilitate drainage and removal of water from the mine workings, which extended to 366 m. Peak production at the Lava Cap occurred between 1934 and 1943, when about 90,000 tons of ore per year were processed. To facilitate removal of the gold and accessory sulfide minerals, the ore was crushed to a very fine sand or silt grain size for processing. Mining operations at Lava Cap ceased in June 1943 due to War Production Board Order L-208 and did not resume after the end of World War II. Two tailings retention structures were built at the Lava Cap Mine. The first was a log dam located about 0.4 km below the flotation mill on Little Clipper Creek, and the second, built in 1938, was a larger earth fill and rip-rap structure constructed about 2 km downstream, which formed the water body now called Lost Lake. The log dam failed during a storm that began on December 31, 1996, and continued into January 1997; an estimated 8,000-10,000 m 3 of tailings were released into Little Clipper Creek during this event. Most of the fine tailings were deposited in Lost Lake, dramatically increasing its turbidity and resulting in a temporary 1-1.5 m rise in lake level due to debris blocking the dam spillway. When the blockage was cleared, the lake level quickly lowered, leaving a "bathtub ring" of very fine tailings deposited substantially above the water line. The U.S. Environmental Protection Agency (EPA) initiated emergency action in late 1997 at the mine site to reduce the possibility of future movement of tailings, and began an assessment of the risks posed by physical and chemical hazards at the site. The EPA's assessment identified arsenic (As) as the primary hazard of concern. Three main exposure routes were identified: inhalation/ingestion of mine tailings, dermal absorption/ingestion of As in lake water from swimming, and ingestion of As-contaminated ground water or surface water. Lost Lake is a private lake which is completely surrounded by low-density residential development. Prior to the dam failure, the lake was used by the local residents for swimming and boating. An estimated 1,776 people reside within one mile of the lake, and almost all residents of the area use potable groundwater for domestic use. Risk factors for human exposure to As derived from mine wastes were high enough to merit placement of the mine site and surrounding area on the National Priority List (commonly called "Superfund"). The Lava Cap Mine Superfund site (LCMS) encompasses approximately 33 acres that include the mine site, the stretch of Little Clipper Creek between the mine and Lost Lake, the lake itself, and the area between the lake and the confluence of Little Clipper Creek with its parent stream, Clipper Creek. The area between the two creeks is named the "deposition area" due to the estimated 24 m thick layer of tailings that were laid down there during and after active mining. The lobate structure of Lost Lake is also due to deposition in this area. The deposition area and Lost Lake are together estimated to contain 382,277 m 3 of tailings. The primary goals of the EPA have been to minimize tailings movement downstream of Lost Lake and to ensure that residents in the area have drinking water that meets national water quality standards. EPA has officially decided to construct a public water supply line to deliver safe water to affected residences, since some residential wells in the area have As concentrations above the current drinking water standard (10 ppb). However, some deeper monitoring wells in the deposition area have As concentrations that are as much as 100 times the As drinking water standard (EPA, 2001). Fracture-dominated groundwater flowpaths complicate measurement of the rate and direction of groundwater flow in the area. Investigations of groundwater movement at the LCMS are planned by the EPA, but have not been undertaken at the time of this writing.

California

Modeling reservoir density underflow and interflow from a chemical spill

An integral simulation model has been developed for understanding and simulating the process of a density current and the transport of spilled chemicals in a stratified reservoir. The model is capable of describing flow behavior and mixing mechanisms in different flow regimes (plunging flow, underflow, and interflow). It computes flow rate, velocity, flow thickness, mixing parameterized by entrainment and dilution, depths of plunging, separation and intrusion, and time of travel. The model was applied to the Shasta Reservoir in northern California during the July 1991 Sacramento River chemical spill. The simulations were used to assist in the emergency response, confirm remediation measures, and guide data collection. Spill data that were available after the emergency response are used to conduct a postaudit of the model results. Predicted flow parameters are presented and compared with observed interflow intrusion depth, travel time, and measured concentrations of spilled chemicals. In the reservoir, temperature difference between incoming river flow and ambient lake water played a dominant role during the processes of flow plunging, separation, and intrusion. With the integral approach, the gross flow behavior can be adequately described and information useful in the analysis of contaminated flow in a reservoir after a spill is provided.

Water Resources Research

Per- and polyfluoroalkyl substances in the Duluth, MN area: Exposure to and biomarker responses in tree swallows relative to known fire-fighting foam sources

Tree swallow nest boxes were deployed at sites proximal to two putative aqueous film forming foam (AFFF) sources in the Duluth, MN area, as well as along the St. Louis River and a reference lake for comparative purposes in 2019, 2020 and 2021. The two AFFF sites were the current Duluth Air National Guard Base (ANG) and the Lake Superior College Emergency Response Training Center. Between 13 and 40 per- and polyfluoroalkyl substances (PFAS), depending on year, were detected and quantified in tree swallow egg, nestling carcasses, and stomach contents. Assessments were made of oxidative stress and ethoxyresorufin-O-dealkylase activity in liver tissue, thyroid hormone levels in plasma and thyroid glands, DNA damage in red blood cells, and two measures of immune response (haptoglobin-like activity and immunoglobulin) in plasma of the nestlings. Additionally, other contaminants, such as polychlorinated biphenyls, legacy organochlorine pesticides, and trace elements, were assessed at sites with no previous data. Total egg PFAS concentrations at the ANG site and north of that site were 30–40 times higher than at the reference lake, while nestling PFAS concentrations were 10–15 times higher. In contrast, the St. Louis River sites had slightly, but non-statistically significant, elevated egg and nestling PFAS concentrations relative to the reference lake (2–5 times higher). One PFAS, perfluorohexane sulfonate (PFHxS), was higher, as a proportion of total PFAS, at sites with a known AFFF source compared to the reference lake, as well as compared to sites along the St. Louis River with mainly urban and industrial sources of PFAS. The ratio of total carboxylates to total sulfonates also distinguished between PFAS sources. There were few to no differences in biomarker responses among sites, and no association with PFAS exposure.

Minnesota

Characterizing infiltration through a mine-waste dump using electrical geophysical and tracer-injection methods, Clear Creek County, Colorado

Infiltration of surface water through mine waste can be an important or even dominant source of contaminants in a watershed. The Waldorf mine site in Clear Creek County, Colorado, is typical of tens of thousands of small mines and prospects on public lands throughout the United States. In this study, electromagnetic (EM) conductivity and direct current (dc) resistivity surveys were conducted in tandem with a NaCl tracer study to delineate ground-water flow paths through a mine-waste dump and adjacent wetland area. The tracer was used to tag adit water infiltrating from braided channels flowing over the top of the dump to seeps at the base of the dump. Infiltration from the braided channels had a maximum flow rate of 92 m/day and a hydraulic conductivity of 1.6 &times; 10 4 cm 3 /s. After rerouting of adit flow around the waste dump, discharge at some of the largest seeps was reduced, although not all seepage was eliminated entirely. Integrating results of the tracer study with those of the EM and dc geophysical surveys revealed two main flow paths of ground water, one beneath the dump and one through the dump. The main source of water to the first flow path is deeper ground water emerging from the fault zone beneath the collapsed adit. This flow path travels beneath the waste dump and appears to have been unaffected by rerouting of the adit discharge around the waste dump. The source of the second flow path is infiltration of adit water from braided channels flowing over the top of the dump, which is intermediate in depth and flows through the center of the waste dump. Following rerouting of adit flow, discharge to seeps at the toe of the dump along this flow path was reduced by as much as two-thirds, although not eliminated entirely. Improved understanding of ground-water flow paths through this abandoned mine site is important in developing effective remediation strategies to target sources of metals emanating from the adit, waste dump, and contaminated wetland area. Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. government.

Colorado

Response of douglas fir (Pseudotsuga menziesii) to uraniferous groundwater in a small glaciated drainage, Northeastern Washington State

Douglas fir trees and associated soils were sampled from the slopes of a small (∼4 km 2 ) drainage basin in northeastern Washington to investigate the biogeochemical response to locally uraniferous groundwater. Uranium is preferentially incorporated in needles and twigs compared to larger branches or the trunk. The U concentration in needle ash ranges from 0.2 to 5.8μg g −1 (ppm) and shows no correlation with the U concentration in associated soils. Rather, the distribution of anomalously uraniferous douglas fir (> 1.0 μ g g −1 U in needle ash) appears to be controlled by observed or readily inferred pathways of near-surface groundwater movement in the drainage. These pathways include: (1) general downslope movement of subsurface runoff; (2) increased flux of near-surface groundwater near the toe of an alluvial fan; and (3) emergence of uraniferous (100–150 ng ml −1 [ppb] groundwater in the vicinity of a slope spring. The data also indicate the presence of near-surface uraniferous groundwater along a structurally controlled zone that parallels the north-south strike of the valley, and that includes the slope spring. The results suggest that biogeochemical sampling may be used to supplement more direct, but more limited, measurements of groundwater quality and flow regime in areas of near-surface contaminated groundwater.

Journal of Geochemical Exploration

Toward sustainable environmental quality: Priority research questions for North America

Anticipating, identifying, and prioritizing strategic needs represent essential activities by research organizations. Decided benefits emerge when these pursuits engage globally important environment and health goals, including the United Nations Sustainable Development Goals. To this end, horizon scanning efforts can facilitate identification of specific research needs to address grand challenges. We report and discuss 40 priority research questions following engagement of scientists and engineers in North America. These timely questions identify the importance of stimulating innovation and developing new methods, tools, and concepts in environmental chemistry and toxicology to improve assessment and management of chemical contaminants and other diverse environmental stressors. Grand challenges to achieving sustainable management of the environment are becoming increasingly complex and structured by global megatrends, which collectively challenge existing sustainable environmental quality efforts. Transdisciplinary, systems‐based approaches will be required to define and avoid adverse biological effects across temporal and spatial gradients. Similarly, coordinated research activities among organizations within and among countries are necessary to address the priority research needs reported here. Acquiring answers to these 40 research questions will not be trivial, but doing so promises to advance sustainable environmental quality in the 21st century.

Environmental Toxicology and Chemistry

Handbook of groundwater remediation using permeable reactive barriers: Applications to radionuclides, trace metals, and nutrients

Over the last century and a half, groundwaters have become contaminated by a growing number of organic and inorganic substances ranging from petroleum-derived hydrocarbons to radioactive compounds, to cancer-causing hexavalent chromium. The importance of uncontaminated groundwater for agriculture, human consumption, and the environmental health of ecosystems is paramount to the health and productivity of industrial society. Water scientists and managers are focused on developing cost-effective methods to reverse this trend. Several methodologies have been developed, however few are as cost-effective as the use of readily available materials, such as iron and organic compost, for absorbing and isolating contaminants within the matrix of a permeable barrier. The Handbook of Groundwater Remediation using Permeable Reactive Barriers presents readers with this latest technology and developments within four main sections: 1. Innovations in Design, Construction, and Evaluation of PRBs 2. Development of Reactive Materials 3. Evaluations of Chemical and Biological Processes 4. Case Studies of Permeable Reactive Barrier Installations The Handbook is one of the first references specifically on this topic. It is an excellent fit for graduate students entering this emerging field as well as professionals conducting research or implementing this technology.

Book

Mixed organic and inorganic tapwater exposures and potential effects in greater Chicago area, USA

Safe drinking water at the point of use (tapwater, TW) is a public-health priority. TW exposures and potential human-health concerns of 540 organics and 35 inorganics were assessed in 45 Chicago area United States (US) homes in 2017. No US Environmental Protection Agency (EPA) enforceable Maximum Contaminant Level(s) (MCL) were exceeded in any residential or water treatment plant (WTP) pre-distribution TW sample. Ninety percent (90%) of organic analytes were not detected in treated TW, emphasizing the high quality of the Lake Michigan drinking-water source and the efficacy of the drinking-water treatment and monitoring. Sixteen (16) organics were detected in >25% of TW samples, with about 50 detected at least once. Low-level TW exposures to unregulated disinfection byproducts (DBP) of emerging concern, per/polyfluoroalkyl substances (PFAS), and three pesticides were ubiquitous. Common exceedances of non-enforceable EPA MCL Goal(s) (MCLG) of zero for arsenic [As], lead [Pb], uranium [U]), bromodichloromethane, and tribromomethane suggest potential human health concerns and emphasize the continuing need for improved understanding of cumulative effects of low-concentration mixtures on vulnerable sub-populations. Because DBP dominated TW organics, residential TW concentrations are potentially predictable with expanded pre-distribution DBP monitoring. However, several TW chemicals, notably Pb and several infrequently detected organic compounds, were not readily explained by pre distribution samples, illustrating the need for continued broad inorganic/organic TW characterization to support consumer assessment of acceptable risk and point-of-use treatment options.

Illinois