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USGS2005

Effective discharge analysis of ecological processes in streams

Discharge is a master variable that controls many processes in stream ecosystems. However, there is uncertainty of which discharges are most important for driving particular ecological processes and thus how flow regime may influence entire stream ecosystems. Here the analytical method of effective discharge from fluvial geomorphology is used to analyze the interaction between frequency and magnitude of discharge events that drive organic matter transport, algal growth, nutrient retention, macroinvertebrate disturbance, and habitat availability. We quantify the ecological effective discharge using a synthesis of previously published studies and modeling from a range of study sites. An analytical expression is then developed for a particular case of ecological effective discharge and is used to explore how effective discharge varies within variable hydrologic regimes. Our results suggest that a range of discharges is important for different ecological processes in an individual stream. Discharges are not equally important; instead, effective discharge values exist that correspond to near modal flows and moderate floods for the variable sets examined. We suggest four types of ecological response to discharge variability: discharge as a transport mechanism, regulator of habitat, process modulator, and disturbance. Effective discharge analysis will perform well when there is a unique, essentially instantaneous relationship between discharge and an ecological process and poorly when effects of discharge are delayed or confounded by legacy effects. Despite some limitations the conceptual and analytical utility of the effective discharge analysis allows exploring general questions about how hydrologic variability influences various ecological processes in streams.

Water Resources Research↗

USGS2026

Appendix 6: Overview of iPOM 2.0: Updates to wolf abundance estimation in Montana

Montana Fish, Wildlife and Parks (MFWP) uses the integrated Patch Occupancy Model (iPOM) to estimate statewide and regional wolf abundance. During the early years of recovery, wolf abundance was tracked using minimum counts. As the population increased, limitations of this method became apparent, motivating development of a model-based approach for estimating abundance. iPOM development began in 2006, was operationalized in 2013, and has been used in its current form (iPOM 1.0) since 2021. Since its inception, iPOM has been developed and presented as an adaptive modeling framework intended to evolve as new data and analytical methods become available1. Here, we briefly present ongoing work to produce the next iteration of iPOM, hereafter iPOM 2.0, and summarize major model updates and resulting preliminary wolf abundance estimates. iPOM uses models for occupancy, territory size, and pack size, along with monitoring data collected by MFWP wolf specialists and potential wolf sightings reported by deer and elk hunters during the 5-week general rifle season each Nov-Dec. These monitoring data, wolf sightings, and covariates for habitat and survey effort are used to model occupancy of packs on a statewide grid of 600-km 2 cells. The area used by wolves is then estimated as each cell’s occupancy estimate multiplied by grid cell area. iPOM estimates pack abundance by dividing this area by predicted territory sizes, and in-pack wolf abundance by multiplying pack abundance by estimated group size. This is combined with a lone wolf rate to estimate total wolf abundance (see Sells et al. 1 for a full description of iPOM 1.0). This technical summary provides a high-level overview of the proposed iPOM updates and their implications for wolf abundance estimates. The estimates presented here represent results as of June 2026 and are provided to inform upcoming discussions surrounding harvest management and regulations (e.g., season dates, quotas, methods). Results are preliminary and remain subject to final model refinement and peer review.

Montana↗

USGS2007

Estimating trend precision and power to detect trends across grouped count data

Ecologists commonly use grouped or clustered count data to estimate temporal trends in counts, abundance indices, or abundance. For example, the U.S. Breeding Bird Survey data represent multiple counts of birds from within each of multiple, spatially defined routes. Despite a reliance on grouped counts, analytical methods for prospectively estimating precision of trend estimates or statistical power to detect trends that explicitly acknowledge the characteristics of grouped count data are undescribed. These characteristics include the fact that the sampling variance is an increasing function of the mean, and that sampling and group-level variance estimates are generally estimated on different scales (the sampling and log scales, respectively). We address these issues for repeated sampling of a single population using an analytical approach that has the flavor of a generalized linear mixed model, specifically that of a negative binomial-distributed count variable with random group effects. The count mean, including grand intercept, trend, and random group effects, is modeled linearly on the log scale, while sampling variance of the mean is estimated on the log scale via the delta method. Results compared favorably with those derived using Monte Carlo simulations. For example, at trend = 5% per temporal unit, differences in standard errors and in power were modest relative to those estimated by simulation (???|11|% and ???|16|%, respectively), with relative differences among power estimates decreasing to ???|7|% when power estimated by simulations was ???0.50. Similar findings were obtained using data from nine surveys of fingernail clams in the Mississippi River. The proposed method is suggested (1) where simulations are not practical and relative precision or power is desired, or (2) when multiple precision or power calculations are required and where the accuracy of a fraction of those calculations will be confirmed using simulations. ?? 2007 by the Ecological Society of America.

Ecology↗

USGS2023

Centurial persistence of forever chemicals at military fire training sites

Drinking water contamination by per- and polyfluoroalkyl substances (PFAS) is widespread near more than 300 United States (U.S.) military bases that used aqueous film-forming foams (AFFF) for fire training and firefighting activities. Much of the PFAS at these sites consist of precursors that can transform into terminal compounds of known health concern but are omitted from standard analytical methods. Here, we estimate the expected duration and contribution of precursor biotransformation to groundwater PFAS contamination at an AFFF-contaminated military base on Cape Cod, Massachusetts, United States, by optimizing a geochemical box model using measured PFAS concentrations from a multidecadal time series of groundwater and a soil survey in the source zone. A toolbox of analytical techniques used to reconstruct the mass budget of PFAS showed that precursors accounted for 46 ± 8% of the extractable organofluorine (a proxy for total PFAS) across years. Terminal PFAS still exceed regulatory limits by 2000-fold decades after AFFF use ceased. Measurements and numerical modeling show that sulfonamido precursors are retained in the vadose zone and their slow biotransformation into perfluoroalkyl sulfonates (half-life > 66 yr) sustains groundwater concentrations of perfluorobutane sulfonate (PFBS) and perfluorohexane sulfonate (PFHxS). The estimated PFAS reservoir in the vadose zone and modeled flux into groundwater suggest PFAS contamination above regulatory guidelines will persist for centuries without remediation.

Massachusetts↗

USGS2019

Determination of study reporting limits for pesticide constituent data for the California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project, 2004–2018—Part 1: National Water Quality Schedules 2003, 2032, or 2033, and 2060

The California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project (GAMA-PBP) is a long-term cooperative project designed to assess the quality of groundwater resources used for public and domestic drinking water supplies in the State of California, to monitor and evaluate changes to that quality, to investigate the human and natural factors controlling water quality, and to improve the availability of comprehensive groundwater quality data and information. Between May 18, 2004, and May 3, 2018, the GAMA-PBP collected 3001 groundwater samples for analysis of pesticide constituents by the U.S. Geological Survey (USGS) National Water Quality Laboratory (NWQL)(note that ‘pesticide constituents’ includes parent compounds and degradates). Of these samples, 2994 were analyzed for pesticide constituents on schedules 2003, 2032, or 2033 (65 to 84 constituents), and 840 were analyzed for pesticide constituents on schedule 2060 (58 constituents). The original dataset reported by the NWQL to the USGS National Water Information System (NWIS) database contained a total of 2,688 detections of 78 pesticide constituents and 253,825 non-detections. In this original dataset, 33 percent of the 3,001 samples analyzed had reported detections of one or more pesticide constituents. This report describes the GAMA-PBP data-quality objectives for pesticide data, the procedures used to establish study reporting limits, and use of those reporting limits to censor the data from the NWQL so that the final data published by the GAMA-PBP meet these data-quality objectives. The final GAMA-PBP dataset for samples collected from May 2004 to May 2018, after censoring, had a total of 1,632 detections of 37 pesticide constituents. In the final GAMA-PBP dataset, 25 percent of the 3,001 samples analyzed had detections of one or more pesticide constituents. The presence of pesticides in groundwater is commonly evaluated by calculating detection frequencies. Detection frequencies for pesticides are sensitive to detection limits and method performance for concentrations near those limits; therefore, the two primary data quality issues addressed in the GAMA-PBP data-quality objectives for pesticides are (1) establishing criteria for classifying data from the laboratory as detections or non-detections for the purpose of data reporting by the project and (2) accounting for changes in analytical methods or method performance over time. The GAMA-PBP addresses these issues by developing study reporting limits that are used as the boundary between detections and non-detections for the reporting of GAMA-PBP results. These reporting limits are defined from method detection limits (MDLs) provided by the NWQL, unless examination of results from laboratory set blanks (LSBs) and GAMA-PBP field blanks indicates that a higher concentration censoring limit is warranted. The GAMA-PBP selected the MDL as the primary choice for defining study reporting limits for consistency with U.S. Environmental Protection Agency (EPA) guidelines for reporting detections of pesticides and other organic constituents. A five-step procedure is used to develop study reporting limits and censor the GAMA-PBP dataset accordingly. The effect of the censoring at each step is described to provide information about the relative effect of each step on the overall censoring of the dataset. Steps 1 and 2 can be implemented at the time the data are received, whereas steps 3−5 require information accumulated over an extended period. Step 1: Reject results that were most likely the result of specific contamination instances attributable to unusual field or laboratory conditions during sample collection or processing. Two such instances were identified, leading to rejection of 25 detections, which were assigned a data-quality indicator code of “Q” for “reviewed and rejected” in the NWIS database. Step 2: Use the NWQL MDLs in effect at the time each sample was analyzed as the reporting limit. A total of 506 detections were censored on this basis. Step 3: Use the maximum MDL established by the NWQL during July 2004–August 2018 (MDLmax) as the reporting limit. The rationale for using the MDLmax as the reporting limit is based primarily on the observation that the concentrations of MDLs generally increased over time. A total of 438 detections were censored on this basis. Step 4: Use the LSBs to identify periods of greater potential laboratory contamination bias and define raised reporting limits to be used during those periods. These periods were defined by using a moving average detection frequency approach. For consistency with the NWQL procedures for defining raised reporting limits on the basis of detections in LSBs, the raised reporting limits were defined as equal to three times the highest concentration measured in an LSB during the period. A total of 25 detections in groundwater samples analyzed during periods of increased laboratory contamination bias were censored. Step 5: Use the LSBs and field blanks to identify potential contamination bias from field or laboratory processes outside of the time periods identified in step 4. The NWQL protocols were used to define the MDLs from blanks analyzed outside of the periods identified in step 4. If an MDL defined from blanks was greater than the MDLmax, the MDL defined from blanks was used to censor the data. One constituent had a study reporting limit defined on this basis, and a total of 62 detections in groundwater samples were censored. As of 2019, the USGS NWIS database does not have the capability to store both the original value reported by the NWQL and the final value published by the GAMA-PBP that reflects application of the quality-control censoring described in this report. In the interim, while this capability is developed, the 1,031 results censored in steps 2−5 are blocked from public release in NWIS, and the GAMA-PBP has published the original and final values in a USGS data release accompanying this report. The entire GAMA-PBP final dataset for pesticide constituents on schedules 2003, 2032, or 2033, or on schedule 2060 is publicly available in that USGS data release, through the USGS GAMA-PBP public web portal, and through the California State Water Resources Control Board GAMA public groundwater information system.

California↗

USGS1994

Slug tests for determining hydraulic conductivity of natural geologic deposits

This paper reviews four methods for analyzing slug test data to determine hydraulic conductivity and examines the effects of slug size on slug test results. Data from more than 100 slug tests, including tests for low permeability (glacial tills and fractured rock) deposits, coarse-grained (sand) deposits, and simulated tests were analyzed. Analysis of the data showed that all four analytical methods can produce similar values of hydraulic conductivity for low permeability deposits. Values determined for coarser deposits were highly dependent on method; values commonly spanned up to two orders of magnitude. The method of Cooper et al. (1967) generally produced the highest values, followed by the methods of Bouwer and Rice (1976), Hvorslev (1951), and Nguyen and Pinder (1984). For sandy materials, tests were repeated on each well using several different slug sizes, ranging from 0.5 to 6 meters. Several of the glacial till materials were tested using two different slug sizes. Calculated hydraulic conductivity values were independent of these slug sizes.

Conference Paper↗

USGS1995

Interlaboratory study of a method for determining nonvolatile organic carbon in aquifer materials

The organic carbon fraction in aquifer materials exerts a major influence on the subsurface mobilities of organic and organic-associated contaminants. The spatial distribution of total organic carbon (TOC) in aquifer materials must be determined before the transport of hydrophobic organic pollutants in aquifers can be modeled accurately. Previous interlaboratory studies showed that it is difficult to measure TOC concentrations <0.1% in aquifer materials, when total inorganic carbon (TIC) concentrations are >1%. We have tested a new analytical method designed to improve the accuracy and precision of nonvolatile TOC quantitation in geologic materials that also contain carbonate minerals. Four authentic aquifer materials and one NIST standard reference material were selected as test materials for a blind collaborative study. Nonvolatile TOC in these materials ranged from 0.05 to 1.4%, while TIC ranged from 0.46 to 12.6%. Sample replicates were digested with sulfurous acid, dried at 40??C, and then combusted at 950??C using LECO or UIC instruments. For the three test materials that contained >2% TIC, incomplete acidification resulted in a systematic positive bias of TOC values reported by five of the six laboratories that used the test method. Participants did not have enough time to become proficient with the new method before they analyzed the test materials. A seventh laboratory successfully used an alternative method that analyzed separate liquid and solid fractions of the acidified sample residues. ?? 1995 Springer-Verlag.

Environmental Geology↗

USGS2003

Stream Bank Stability in Eastern Nebraska

Dredged and straightened channels in eastern Nebraska have experienced degradation leading to channel widening by bank failure. Degradation has progressed headward and affected the drainage systems upstream from the modified reaches. This report describes a study that was undertaken to analyze bank stability at selected sites in eastern Nebraska and develop a simplified method for estimating the stability of banks at future study sites. Bank cross sections along straight reaches of channel and geotechnical data were collected at approximately 150 sites in 26 counties of eastern Nebraska. The sites were categorized into three groups based on mapped soil permeability. With increasing permeability of the soil groups, the median cohesion values decreased and the median friction angles increased. Three analytical methods were used to determine if banks were stable (should not fail even when saturated), at risk (should not fail unless saturated), or unstable (should have already failed). The Culmann and Agricultural Research Service methods were based on the Coulomb equation and planar failure; an indirect method was developed that was based on Bishop's simplified method of slices and rotational failure. The maximum angle from horizontal at which the bank would be stable for the given soil and bank height conditions also was computed with the indirect method. Because of few soil shear-strength data, all analyses were based on the assumption of homogeneous banks, which was later shown to be atypical, at least for some banks. Using the Culmann method and assuming no soil tension cracks, 67 percent of all 908 bank sections were identified as stable, 32 percent were at risk, and 1 percent were unstable; when tension cracks were assumed, the results changed to 58 percent stable, 40 percent at risk, and 1 percent unstable. Using the Agricultural Research Service method, 67 percent of all bank sections were identified as stable and 33 percent were at risk. Using the indirect method, 62 percent of all bank sections were identified as stable and 31 percent were at risk; 3 percent were unstable, and 3 percent were outside of the range of the tables developed for the method. For each of the methods that were used, the largest percentage of stable banks and the smallest percentage of at risk banks was for the soil group with the lowest soil permeability and highest median cohesion values. A comparison of the expected stable bank angles for saturated conditions and the surveyed bank angles indicated that many of the surveyed bank angles were considerably less than the maximum expected stable bank angles despite the banks being classified as at risk or unstable. For severely degraded channels along straight reaches this was not expected. It was expected that they would have angles close to the maximum stable angle as they should have been failing from an oversteepened condition. Several explanations are possible. The channel reaches of some study sites have not yet been affected to a significant degree by degradation; study sites were selected throughout individual basins and severe degradation has not yet extended to some sites along upper reaches; and some reaches have experienced aggradation as degradation progresses upstream. Another possibility is that some bank sections have been affected by lateral migration processes, which typically result in shallow bank angles on the inside bend of the channel. Another possibility is that the maximum expected stable bank angles are too steep. The stability methods used were well established and in essential agreement with each other, and there was no reason to question the geometry data. This left non-representative soil data as a probable reason for computed stable bank angles that, at least in some cases, are overly steep. Based on an examination of the cohesion data, to which the stable bank-angle calculations were most sensitive, both vertical and horizontal variability in soil properti

Water-Resources Investigations Report↗

USGS2017

Evaluation of laser ablation double-focusing SC-ICPMS for “common” lead isotopic measurements in silicate glasses and mineral

An analytical method for the in situ measurement of “common” Pb isotope ratios in silicate glasses and minerals using a 193-nm excimer laser ablation (LA) system with a double-focusing single-collector (SC)-ICPMS is presented and evaluated as a possible alternative to multiple-collector (MC)-ICPMS. This LA-SC-ICPMS technique employs fast-scanning ion deflectors to sequentially place a series of flat-topped isotope peaks into a single ion-counting detector at a fixed accelerating voltage and magnetic field strength. Reference materials (including NIST, MPI-DING, and USGS glasses) are used to identify two analytical artifacts on the Pb isotope ratios (expressed here as heavier/lighter isotopes) when corrected for mass bias relative to NIST SRM610. The first artifact is characterized by anomalously low Pb isotope ratios (~0.1%/AMU) when SRM610 is analyzed in raster mode as an unknown at small spot sizes (<25 µm), which may indicate that (1) SRM610 is isotopically heterogeneous on a small length scale and/or (2) there is a non-spectral matrix effect on the Pb isotope ratios related to differences in spot size. The second artifact is characterized by anomalously high Pb isotope ratios (<0.1%/AMU) for NIST SRM612 (in raster mode) and some Fe-rich glass reference materials (BCR-2G, GOR132-G, and T1-G). These offsets are thought to be caused by one or more non-spectral matrix effects related to differences in the ablation behavior, composition, or physical properties of these reference materials compared to the bracketing SRM610 standard. The precision (±2SD) of our LA-SC-ICPMS Pb isotopic measurements is similar to ( 207 Pb/ 206 Pb and 208 Pb/ 206 Pb, or 20X Pb/ 206 Pb) or better than ( 206 Pb/ 204 Pb, 207 Pb/ 204 Pb, and 208 Pb/ 204 Pb, or 20X Pb/ 204 Pb) a series of published studies that used a different type of SC-ICPMS and obtained a factor of ~3-4 higher sensitivity for Pb. An increase in the sensitivity of our LA-SC-ICPMS would likely improve the precision of the 20X Pb/ 206 Pb and 20X Pb/ 204P b ratios for low-Pb materials (<5 ppm), possibly making the technique broadly similar to LA-MC-ICPMS (particularly compared to methods that rely upon at least one ion-counting detector). Further improvement in the precision of the 20X Pb/ 206 Pb and 20X Pb/ 204 Pb ratios for high-Pb materials (>5 ppm) by LA-SC-ICPMS is unlikely, and in this case, LA-MC-ICPMS remains the preferable analytical technique.

Journal of Analytical Atomic Spectrometry↗

USGS2003

Ground-Water Levels and Water-Quality Data for Wells in the Crumpton Creek Area near Arnold Air Force Base, Tennessee, November 2001 to January 2002

From November 2001 to January 2002, a study of the ground-water resources in the Crumpton Creek area of Middle Tennessee was conducted to determine whether volatile organic compounds (VOCs) from Arnold Air Force Base (AAFB) have affected local private water supplies and to advance understanding of the ground-water-flow system in this area. VOC samples were collected from private wells that were not included in previous sampling efforts conducted in the Crumpton Creek area near AAFB. Ground-water-flow directions were investigated by measuring water levels in wells and constructing a potentiometric-surface map of the Manchester aquifer in the study area. Data were collected from a total of 68 private wells, 82 monitoring wells, and 1 cave during the period of study. Ground-water levels were determined for 42 of the private wells and for all 82 monitoring wells. Of the 82 monitoring wells, 81 withdraw water from the Manchester aquifer and 1 well withdraws water from the overlying shallow aquifer. The Manchester aquifer wells range in depth from 20 to 150 feet. Water-level altitudes for the Manchester aquifer ranged from 956 to 1,064 feet above the National Geodetic Vertical Datum of 1929. Water levels ranged from approximately 6 feet above land surface to 94 feet below land surface. Water-quality samples were collected from all 68 private wells, 8 of the monitoring wells, and the 1 cave. Of the 55 VOCs analyzed, 42 were not detected. Thirteen VOCs were detected; however, only tetrachloroethylene (PCE), methylene chloride, and toluene were detected at concentrations equal to or above reporting levels for the analytical method used. PCE was detected in water samples from 15 private wells and was the only VOC that exceeded drinking water maximum contaminant levels for public water systems. PCE concentrations in samples from five of the wells were below the reporting level and ranged from estimated concentrations of 0.46 to 0.80 microgram per liter (?g/L). Samples from 10 wells contained concentrations equal to or greater than the analytical reporting level of 1 ?g/L for PCE. Samples from one of these wells contained PCE concentrations (12 ?g/L and 11 ?g/L) exceeding the drinking water maximum contaminant level of 5 ?g/L for PCE. The spatial distribution of PCE detections and the relative concentrations of PCE and trichloroethylene suggest that the PCE detections are associated with a small and localized ground-water contamination plume unrelated to AAFB ground-water contamination.

Water-Resources Investigations Report↗

USGS1985

Results of the US Geological Survey's second International Interlaboratory Analytical Comparison Study; Standard Reference Water Samples M-86 (major constituents), T-87 (trace constituents), and P-5 (precipitation snowmelt)

The U.S. Geological Survey began an interlaboratory testing program of standard-reference water samples in 1962. Program objectives have been to provide a means for participating anaytical laboratories to: (1) Identify analytical problems, (2) ascertain the accuracy and precision of common water analyses and analytical methods, and (3) obtain reference samples for continuing quality-assurance testing. Participation in this continuing quality-assurance program is mandatory for all domestic laboratories providing water-analysis data for Survey use and storage in the WATSTORE data-storage system, if appropriate standard-reference water samples are available. The program was expanded in October 1982 to include laboratories in other countries. This report presents analytical data submitted by the 53 laboratories in other countries that analyzed the standard-reference water samples distributed in October 1983. Statistical evaluation of the data and performance ratings achieved by the laboratories for each determination are given in nine tables. Comparisons of the most probable values for the constituents determined by both other countries and domestic laboratories also are presented. (USGS)

Water-Resources Investigations Report↗

USGS2025

Earth Mapping Resources Initiative protocols—Sampling hard-rock mine waste and perpetual mine water sources

Supporting the overarching goal to evaluate critical minerals nationwide, the mine waste characterization effort in the U.S. Geological Survey (USGS) Earth Mapping Resources Initiative has created a series of protocols to standardize sampling carried out under this effort by the participating State geological surveys and their cooperators. The protocols are based on published, reviewed methods that can be deployed in the field. The protocols include (1) collecting and processing composite samples of mine and mill waste, including tailings, waste rock, gangue, heap leach piles, ore stockpiles, slag, or other mineralized and processed materials and (2) collecting and preserving water samples from perpetual or long-term mine water sources. The protocols also specify information to document on field sheets and detail the collection of geospatial data. The analytical methods used by the USGS and USGS contract laboratories are described in this report, including the data delivery pathway for USGS-derived data.

Scientific Investigations Report↗

USGS2021

Cyprosulfamide: Analysis of the herbicide safener and two of its degradates in surface water and groundwater from the Midwestern United States

Herbicide safeners are commonly included in herbicide formulations to selectively protect crops from herbicide toxicity but are poorly understood in terms of their environmental occurrence and fate. This study established an analytical method for a newer safener, cyprosulfamide, and two of its degradates, cyprosulfamide desmethyl and N -cyclopropyl-4-sulfamoylbenzamide, in water via solid-phase extraction and liquid chromatography with tandem mass spectroscopy. To evaluate the potential for off-field transport and transformation of cyprosulfamide, the method was used to analyze groundwater and surface water samples collected near cornfields in the midwestern United States where cyprosulfamide had been applied. All three compounds were detected in surface water samples ( N = 34); N -cyclopropyl-4-sulfamoylbenzamide was most frequently detected (56%), followed by cyprosulfamide (25%) and cyprosulfamide desmethyl (19%). Maximum concentrations ranged from 22.0 to 5185.9 ng/L, with the highest concentrations and detection rates during the growing season. None of our target analytes were detected in groundwater.

ACS Agricultural Science and Technology↗

USGS2004

The National Geochemical Survey: Database and documentation

The USGS, in collaboration with other federal and state government agencies, industry, and academia, is conducting the National Geochemical Survey (NGS) to produce a body of geochemical data for the United States based primarily on stream sediments, analyzed using a consistent set of methods. These data will compose a complete, national-scale geochemical coverage of the US, and will enable construction of geochemical maps, refine estimates of baseline concentrations of chemical elements in the sampled media, and provide context for a wide variety of studies in the geological and environmental sciences. The goal of the NGS is to analyze at least one stream-sediment sample in every 289 km2 area by a single set of analytical methods across the entire nation, with other solid sample media substituted where necessary. The NGS incorporates geochemical data from a variety of sources, including existing analyses in USGS databases, reanalyses of samples in USGS archives, and analyses of newly collected samples. At the present time, the NGS includes data covering ~71% of the land area of the US, including samples in all 50 states. This version of the online report provides complete access to NGS data, describes the history of the project, the methodology used, and presents preliminary geochemical maps for all analyzed elements. Future editions of this and other related reports will include the results of analysis of variance studies, as well as interpretive products related to the NGS data.

Open-File Report↗

USGS2026

Correcting a systematic bias in an ocean drilling project site 882 alkenone sea surface temperature record

Reconstructions of sea surface temperature (SST) in the geologic record are fundamental to our understanding of Earth's climate history and the evaluation of Earth's climate sensitivity to greenhouse gas forcing. SSTs are reconstructed with a variety of methods, including alkenone biomarker lipids produced by certain coccolithophore algae. One such alkenone SST reconstruction from the subpolar northwest Pacific Ocean Drilling Program (ODP) Site 882 (50.21° N, 167.35° E, 3244 m water depth) has played a large role in shaping the paleoclimate science community's view of global climate warmth during the Late Pliocene (3.6–2.6 million years ago) and the subsequent cooling that characterized the intensification of Northern Hemisphere Glaciation (Haug, 1995; Haug et al., 2005; Martínez-Garcia et al., 2010). First, we have found that the values reported in the PANGAEA archive for this ODP Site 882 alkenone dataset were inaccurately reported as U K' 37 values when they are instead U K 37 ( https://doi.org/10.1594/PANGAEA.315092 , Haug and Sarnthein, 2005). This error in the archived data table resulted in the incorporation of inaccurate absolute SST estimates by several studies that applied U K' 37 calibrations to this ODP Site 882 dataset (e.g., Brennan et al., 2022; Clark et al., 2024, 2025; Tierney et al., 2019, 2025b). Second, using other published data from ODP Site 882 (Studer et al., 2012) and nearby Site 883 (51.11° N, 167.46° E, 2384 m water depth; Herbert et al., 2016; Novak et al., 2024), we show that the original Haug (1995) alkenone SST record at ODP Site 882 systematically reports an amplified range of absolute SST values compared to the more recently generated data. This observation is consistent with the known concentration-dependent biases of the gas chromatography chemical ionization mass spectrometry (GC-CI-MS) analytical method used by the original ODP Site 882 study (Chaler et al., 2000, 2003; Haug, 1995; Hefter, 2008; Rosell-Mele et al., 1995). These concentration-dependent analytical biases complicate applying a uniform correction to the entire Haug (1995) dataset. However, we are able to leverage the published datasets to propose a correction and quantification of uncertainty for a subset of the Haug (1995) dataset measured at similar on-column analyte abundance. For these samples, we find an average analytical uncertainty equivalent to ±2.05 °C , which is greater than and in addition to the typical ±1.4 °C 1 σ prediction uncertainty of the U K' 37 sea surface temperature proxy. We then discuss the implications of the corrected dataset for our understanding of late Neogene and Quaternary climate in the Kuroshio Extension region.

Climate of the Past↗

USGS2025

In situ Re-Os geochronology of Re-rich Palaeogene molybdenite by LA-ICP-MS/MS

In situ Re–Os geochronology by LA-ICP-MS/MS was previously demonstrated by reacting Os with CH 4 or N 2 O reaction gasses. However, for both reactions, a minor proportion of the Re parent isotope also reacts, potentially leading to significant isobaric interferences of 187 Re on 187 Os, especially for young samples with little radiogenic in-growth. Here we present an interlaboratory comparison and compare three reaction gas mixtures (CH 4 + H 2 + He, N 2 O and N 2 O + He) with the aim to robustly date Palaeogene (66–23 Ma) molybdenite from the Bingham Canyon and Henderson deposits. CH 4 mixed with H 2 gas gives the highest sensitivity, while N 2 O and He gas buffer Re reaction. On balance, the analytical method involving N 2 O + He reaction gas is most suitable for dating Palaeogene molybdenite, resulting in age precision of 2.6% for Bingham and 5.8% for Henderson. For older, >1 Ga molybdenite, CH 4 + H 2 + He may give comparatively better age precision.

Colorado, Utah↗

USGS2018

Computing under-ice discharge: A proof-of-concept using hydroacoustics and the Probability Concept

Under-ice discharge is estimated using open-water reference hydrographs; however, the ratings for ice-affected sites are generally qualified as poor. The U.S. Geological Survey (USGS), in collaboration with the Colorado Water Conservation Board, conducted a proof-of-concept to develop an alternative method for computing under-ice discharge using hydroacoustics and the Probability Concept. The study site was located south of Minturn, Colorado (CO), USA, and was selected because of (1) its proximity to the existing USGS streamgage 09064600 Eagle River near Minturn, CO, and (2) its ease-of-access to verify discharge using a variety of conventional methods. From late September 2014 to early March 2015, hydraulic conditions varied from open water to under ice. These temporal changes led to variations in water depth and velocity. Hydroacoustics (tethered and uplooking acoustic Doppler current profilers and acoustic Doppler velocimeters) were deployed to measure the vertical-velocity profile at a singularly important vertical of the channel-cross section. Because the velocity profile was non-standard and cannot be characterized using a Power Law or Log Law, velocity data were analyzed using the Probability Concept, which is a probabilistic formulation of the velocity distribution. The Probability Concept-derived discharge was compared to conventional methods including stage-discharge and index-velocity ratings and concurrent field measurements; each is complicated by the dynamics of ice formation, pressure influences on stage measurements, and variations in cross-sectional area due to ice formation. No particular discharge method was assigned as truth. Rather one statistical metric (Kolmogorov-Smirnov; KS), agreement plots, and concurrent measurements provided a measure of comparability between various methods. Regardless of the method employed, comparisons between each method revealed encouraging results depending on the flow conditions and the absence or presence of ice cover. For example, during lower discharges dominated by under-ice and transition (intermittent open-water and under-ice) conditions, the KS metric suggests there is not sufficient information to reject the null hypothesis and implies that the Probability Concept and index-velocity rating represent similar distributions. During high-flow, open-water conditions, the comparisons are less definitive; therefore, it is important that the appropriate analytical method and instrumentation be selected. Six conventional discharge measurements were collected concurrently with Probability Concept-derived discharges with percent differences (%) of −9.0%, −21%, −8.6%, 17.8%, 3.6%, and −2.3%. This proof-of-concept demonstrates that riverine discharges can be computed using the Probability Concept for a range of hydraulic extremes (variations in discharge, open-water and under-ice conditions) immediately after the siting phase is complete, which typically requires one day. Computing real-time discharges is particularly important at sites, where (1) new streamgages are planned, (2) river hydraulics are complex, and (3) shifts in the stage-discharge rating are needed to correct the streamflow record. Use of the Probability Concept does not preclude the need to maintain a stage-area relation. Both the Probability Concept and index-velocity rating offer water-resource managers and decision makers alternatives for computing real-time discharge for open-water and under-ice conditions.

Colorado↗

USGS2016

Estimating black bear density in New Mexico using noninvasive genetic sampling coupled with spatially explicit capture-recapture methods

During the 2004–2005 to 2015–2016 hunting seasons, the New Mexico Department of Game and Fish (NMDGF) estimated black bear abundance (Ursus americanus) across the state by coupling density estimates with the distribution of primary habitat generated by Costello et al. (2001). These estimates have been used to set harvest limits. For example, a density of 17 bears/100 km2 for the Sangre de Cristo and Sacramento Mountains and 13.2 bears/100 km2 for the Sandia Mountains were used to set harvest levels. The advancement and widespread acceptance of non-invasive sampling and mark-recapture methods, prompted the NMDGF to collaborate with the New Mexico Cooperative Fish and Wildlife Research Unit and New Mexico State University to update their density estimates for black bear populations in select mountain ranges across the state. We established 5 study areas in 3 mountain ranges: the northern (NSC; sampled in 2012) and southern Sangre de Cristo Mountains (SSC; sampled in 2013), the Sandia Mountains (Sandias; sampled in 2014), and the northern (NSacs) and southern Sacramento Mountains (SSacs; both sampled in 2014). We collected hair samples from black bears using two concurrent non-invasive sampling methods, hair traps and bear rubs. We used a gender marker and a suite of microsatellite loci to determine the individual identification of hair samples that were suitable for genetic analysis. We used these data to generate mark-recapture encounter histories for each bear and estimated density in a spatially explicit capture-recapture framework (SECR). We constructed a suite of SECR candidate models using sex, elevation, land cover type, and time to model heterogeneity in detection probability and the spatial scale over which detection probability declines. We used Akaike’s Information Criterion corrected for small sample size (AICc) to rank and select the most supported model from which we estimated density. We set 554 hair traps, 117 bear rubs and collected 4,083 hair samples. We identified 725 (367 M, 358 F) individuals; the sex ratio for each study area was approximately equal. Our density estimates varied within and among mountain ranges with an estimated density of 21.86 bears/100 km2 (95% CI: 17.83 – 26.80) for the NSC, 19.74 bears/100 km2 (95% CI: 13.77 – 28.30) in the SSC, 25.75 bears/100 km2 (95% CI: 13.22 – 50.14) in the Sandias, 21.86 bears/100 km2 (95% CI: 17.83 – 26.80) in the NSacs, and 16.55 bears/100 km2 (95% CI: 11.64 – 23.53) in the SSacs. Overall detection probability for hair traps and bear rubs, combined, was low across all study areas and ranged from 0.00001 to 0.02. We speculate that detection probabilities were affected by failure of some hair samples to produce a complete genotype due to UV degradation of DNA, and our inability to set and check some sampling devices due to wildfires in the SSC. Ultraviolet radiation levels are particularly high in New Mexico compared to other states where NGS methods have been used because New Mexico receives substantial amounts of sunshine, is relatively high in elevation (1,200 m – 4,000 m), and is at a lower latitude. Despite these sampling difficulties, we were able to produce density estimates for New Mexico black bear populations with levels of precision comparable to estimated black bear densities made elsewhere in the U.S. Our ability to generate reliable black bear density estimates for 3 New Mexico mountain ranges is attributable to our use of a statistically robust study design and analytical method. There are multiple factors that need to be considered when developing future SECR-based density estimation projects. First, the spatial extent of the population of interest and the smallest average home range size must be determined; these will dictate size of the trapping array and spacing necessary between hair traps. The number of technicians needed and access to the study areas will also influence configuration of the trapping array. We believe shorter sampling occasions could be implemented to reduce degradation of DNA due to UV radiation; this might help increase amplification rates and thereby increase both the number of unique individuals identified and the number of recaptures, improving the precision of the density estimates. A pilot study may be useful to determine the length of time hair samples can remain in the field prior to collection. In addition, researchers may consider setting hair traps and bear rubs in more shaded areas (e.g., north facing slopes) to help reduce exposure to UV radiation. To reduce the sampling interval it will be necessary to either hire more field personnel or decrease the number of hair traps per sampling session. Both of these will enhance detection of long-range movement events by individual bears, increase initial capture and recapture rates, and improve precision of the parameter estimates. We recognize that all studies are constrained by limited resources, however, increasing field personnel would also allow a larger study area to be sampled or enable higher trap density. In conclusion, we estimated the density of black bears in 5 study areas within 3 mountains ranges of New Mexico. Our estimates will aid the NMDGF in setting sustainable harvest limits. Along with estimates of density, information on additional demographic rates (e.g., survival rates and reproduction) and the potential effects that climate change and future land use may have on the demography of black bears may also help inform management of black bears in New Mexico, and may be considered as future areas for research.

New Mexico↗