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Seasonally-dynamic presence-only species distribution models for a cryptic migratory bat impacted by wind energy development

Understanding seasonal distribution and movement patterns of animals that migrate long distances is an essential part of monitoring and conserving their populations. Compared to migratory birds and other more conspicuous migrants, we know very little about the movement patterns of many migratory bats. Hoary bats ( Lasiurus cinereus ), a cryptic, wide-ranging, long-distance migrant, comprise a substantial proportion of the tens to hundreds of thousands of bat fatalities estimated to occur each year at wind turbines in North America. We created seasonally-dynamic species distribution models (SDMs) from 2,753 museum occurrence records collected over five decades in North America to better understand the seasonal geographic distributions of hoary bats. We used 5 SDM approaches: logistic regression, multivariate adaptive regression splines, boosted regression trees, random forest, and maximum entropy and consolidated outputs to generate ensemble maps. These maps represent the first formal hypotheses for sex- and season-specific hoary bat distributions. Our results suggest that North American hoary bats winter in regions with relatively long growing seasons where temperatures are moderated by proximity to oceans, and then move to the continental interior for the summer. SDMs suggested that hoary bats are most broadly distributed in autumn—the season when they are most susceptible to mortality from wind turbines; this season contains the greatest overlap between potentially suitable habitat and wind energy facilities. Comparing wind-turbine fatality data to model outputs could test many predictions, such as ‘risk from turbines is highest in habitats between hoary bat summering and wintering grounds’. Although future field studies are needed to validate the SDMs, this study generated well-justified and testable hypotheses of hoary bat migration patterns and seasonal distribution.

PLoS ONE

Quantitative analysis of American woodcock nest and brood habitat

Sixteen nest and 19 brood sites of American woodcock (Philohela minoI) were examined in northern lower Michigan between 15 April and 15 June 1974 to determine habitat structure associated with these sites. Woodcock hens utilized young, second-growth forest stands which were similar in species composition for both nesting and brood rearing. A multi-varIate discriminant function analysis revealed a significant (P< 0.05) difference, however, in habitat structure. Nest habitat was characterized by lower tree density (2176 trees/ha) and basal area (8.6 m2/ha), by being close to forest openings (7 m) and by being situated on dry, relatively well drained sites. In contrast, woodcock broods were located in sites that had nearly twice the tree density (3934 trees/hal and basal area (16.5 m2/ha), was located over twice as far from forest openings (18 m) and generally occurred on damp sites, near (8 m) standing water. Importance of the habitat features to the species and possible management implications are discussed.

Book chapter

Forest fragmentation and bird community dynamics: Inference at regional scales

With increasing fragmentation of natural areas and a dramatic reduction of forest cover in several parts of the world, quantifying the impact of such changes on species richness and community dynamics has been a subject of much concern. Here, we tested whether in more fragmented landscapes there was a lower number of area-sensitive species and higher local extinction and turnover rates, which could explain higher temporal variability in species richness. To investigate such potential landscape effects at a regional scale, we merged two independent, large-scale monitoring efforts: the North American Breeding Bird Survey (BBS) and the Land Use and Land Cover Classification data from the U.S. Geological Survey. We used methods that accounted for heterogeneity in the probability of detecting species to estimate species richness and temporal changes in the bird communities for BBS routes in three mid-Atlantic U.S. states. Forest breeding bird species were grouped prior to the analyses into area-sensitive and non-area-sensitive species according to previous studies. We tested predictions relating measures of forest structure at one point in time (1974) to species richness at that time and to parameters of forest bird community change over the following 22-yr-period (1975–1996). We used the mean size of forest patches to characterize landscape structure, as high correlations among landscape variables did not allow us to disentangle the relative roles of habitat fragmentation per se and habitat loss. As predicted, together with lower species richness for area-sensitive species on routes surrounded by landscapes with lower mean forest-patch size, we found higher mean year-to-year rates of local extinction. Moreover, the mean year-to-year rates of local turnover (proportion of locally new species) for area-sensitive species were also higher in landscapes with lower mean forest-patch size. These associations were not observed for the non-area-sensitive species group. These results suggest that landscape structure may influence forest bird communities at regional scales through its effects on the total number of species but also on the temporal rates of change in community composition. Evidence for higher rates of local extinction and turnover in more fragmented landscapes suggests that bird communities function as metapopulations at a regional scale, and points out the importance of colonizations and recolonizations from surrounding landscapes to local community dynamics. Further, our results illustrate that the methods used to estimate the community parameters can be a powerful statistical tool in addressing questions relative to the dynamics of communities.

Ecology

Drought before fire increases tree mortality after fire

Fire and drought are expected to increase in frequency and severity in temperate forests due to climate change. To evaluate whether drought increases the likelihood of post-fire tree mortality, we used a large database of tree survival and mortality from 32 years of wildland fires covering four dominant western North American conifers. We used Bayesian hierarchical modeling to predict the probability of individual tree mortality after fire based on species— Pinus contorta (lodgepole pine), Abies concolor (white fir), Pseudotsuga menziesii (Douglas-fir), and Pinus ponderosa (ponderosa pine)—bark thickness, bark char, percentage live tree crown scorched or consumed crown volume scorch (CVS), and mean annual climatic water deficit (CWD) anomalies the year pre-fire and fire year relative to the 1985–2015 reference period. Although crown injury was the primary determinant of tree mortality after fire, drought increased likelihood of death, with a 2-SD increase in CWD (+115.7) resulting in a 78% increase in the probability of mortality. We assessed the crown scorch level expected to result in >50% probability of mortality under different CWD scenarios: observed CWD, CWD of +2, and +4°C warming scenarios. Increased climatic moisture stress amplified tree death, reducing the threshold that causes tree mortality across all conifers under +4°C warming, with more subtle and species-specific reductions for the +2°C scenario. Models predicting post-fire tree mortality are components of global and regional carbon estimates, habitat suitability assessments, and forest management planning and decision support systems. The amplifying effects of drought on post-fire tree mortality and predicted future climates are likely to lead to higher tree mortality following fires in forested landscapes of western North America and may have cascading effects on ecosystem services and future forest resilience.

western United States

Influences of calcium availability and tree species on Ca isotope fractionation in soil and vegetation

The calcium (Ca) isotope system is potentially of great use for understanding biogeochemical processes at multiple scales in forest ecosystems, yet remains largely unexplored for this purpose. In order to further our understanding of Ca behavior in forests, we examined two nearly adjacent hardwood-dominated catchments with differing soil Ca concentrations, developed from crystalline bedrock, to determine the variability of 44Ca/ 40Ca ratios (expressed as ??44Ca) within soil and vegetation pools. For both sugar maple and American beech, the Ca isotope compositions of the measured roots and calculated bulk trees were considerably lighter than those of soil pools at these sites, suggesting that the trees were able to preferentially take up light Ca at the root-soil interface. The Ca isotope compositions of three of four root samples were among the lightest values yet reported for terrestrial materials (??44Ca ???-3.95???). Our results further indicate that Ca isotopes were fractionated along the transpiration streams of both tree species with roots having the least ??44Ca values and leaf litter the greatest. An approximately 2??? difference in ??44Ca values between roots and leaf litter of both tree species suggests a persistent fractionation mechanism along the transpiration stream, likely related to Ca binding in wood tissue coupled with internal ion exchange. Finally, our data indicate that differing tree species demand for Ca and soil Ca concentrations together may influence Ca isotope distribution within the trees. Inter-catchment differences in Ca isotope distributions in soils and trees were minor, indicating that the results of our study may have broad transferability to studies of forest ecosystems in catchments developed on crystalline substrates elsewhere. ?? 2008 Springer Science+Business Media B.V.

Biogeochemistry

Effects of biotic disturbances on forest carbon cycling in the United States and Canada

Forest insects and pathogens are major disturbance agents that have affected millions of hectares in North America in recent decades, implying significant impacts to the carbon (C) cycle. Here, we review and synthesize published studies of the effects of biotic disturbances on forest C cycling in the United States and Canada. Primary productivity in stands was reduced, sometimes considerably, immediately following insect or pathogen attack. After repeated growth reductions caused by some insects or pathogens or a single infestation by some bark beetle species, tree mortality occurred, altering productivity and decomposition. In the years following disturbance, primary productivity in some cases increased rapidly as a result of enhanced growth by surviving vegetation, and in other cases increased slowly because of lower forest regrowth. In the decades following tree mortality, decomposition increased as a result of the large amount of dead organic matter. Net ecosystem productivity decreased immediately following attack, with some studies reporting a switch to a C source to the atmosphere, and increased afterward as the forest regrew and dead organic matter decomposed. Large variability in C cycle responses arose from several factors, including type of insect or pathogen, time since disturbance, number of trees affected, and capacity of remaining vegetation to increase growth rates following outbreak. We identified significant knowledge gaps, including limited understanding of carbon cycle impacts among different biotic disturbance types (particularly pathogens), their impacts at landscape and regional scales, and limited capacity to predict disturbance events and their consequences for carbon cycling. We conclude that biotic disturbances can have major impacts on forest C stocks and fluxes and can be large enough to affect regional C cycling. However, additional research is needed to reduce the uncertainties associated with quantifying biotic disturbance effects on the North American C budget.

Global Change Biology

Diet of the eastern mudminnow (Umbra pygmaea DeKay) from two geographically distinct populations within the North American native range

Umbra pygmaea (Eastern Mudminnow) is a freshwater species common in Atlantic slope coastal lowlands from southern New York to northern Florida and is typical of slow-moving, mud-bottomed, and highly vegetated streams, swamps, and small ponds. We examined its seasonal food habits at the Great Swamp National Wildlife Refuge (NWR), NJ and at the Croatan National Forest, NC. A total of 147 Eastern Mudminnow from 35–112 mm TL and 190 Eastern Mudminnow from 22–89 mm TL were examined from these sites, respectively. At both locations, we found it to be a bottom-feeding generalist that consumes cladocerans, ostracods, chironomid larvae, coleopteran larvae, and other insects and crustaceans. Ostracods were most common in the diet at the Great Swamp NWR and occurred in 62% ± 2.5% of the stomachs with food. At Croatan National Forest, chironomid larvae were most common and occurred in 66.7% ± 15.8% of the stomachs. There were no statistically significant differences in diet composition between the sites during the winter, summer, and fall. However, when compared on an annual basis, Jaccard’s Index (θ J = 0.636, P = 0.05) suggested that the diet at the two study sites was significantly different. While we identified the same major food groups at both locations, the utilization of these food groups varied seasonally. Detritus was a major stomach content at both locations throughout the year. We also documented cannibalism during the summer season at both locations. The seasonal diet of the Eastern Mudminnow was similar to that of Umbra limi (Central Mudminnow) and Umbra krameri (European Mudminnow). Our findings here are the first quantitative examinations of seasonal differences in the diet of the Eastern Mudminnow within its native North American range.

Northeastern Naturalist

Sulfur species behavior in soil organic matter during decomposition

Soil organic matter (SOM) is a primary re??servoir of terrestrial sulfur (S), but its role in the global S cycle remains poorly understood. We examine S speciation by X-ray absorption near-edge structure (XANES) spectroscopy to describe S species behavior during SOM decomposition. Sulfur species in SOM were best represented by organic sulfide, sulfoxide, sulfonate, and sulfate. The highest fraction of S in litter was organic sulfide, but as decomposition progressed, relative fractions of sulfonate and sulfate generally increased. Over 6-month laboratory incubations, organic sulfide was most reactive, suggesting that a fraction of this species was associated with a highly labile pool of SOM. During humification, relative concentrations of sulfoxide consistently decreased, demonstrating the importance of sulfoxide as a reactive S phase in soil. Sulfonate fractional abundance increased during humification irrespective of litter type, illustrating its relative stability in soils. The proportion of S species did not differ systematically by litter type, but organic sulfide became less abundant in conifer SOM during decomposition, while sulfate fractional abundance increased. Conversely, deciduous SOM exhibited lesser or nonexistent shifts in organic sulfide and sulfate fractions during decomposition, possibly suggesting that S reactivity in deciduous litter is coupled to rapid C mineralization and independent of S speciation. All trends were consistent in soils across study sites. We conclude that S reactivity is related to spqciation in SOM, particularly in conifer forests, and S species fractions in SOM change, during decomposition. Our data highlight the importance of intermediate valence species (sulfoxide and sulfonate) in the pedochemical cycling of organic bound S. Copyright 2007 by the American Geophysical Union.

Journal of Geophysical Research G: Biogeosciences

Science foundation Chapter 5 Appendix 5.1: Case study dabbling ducks

Dabbling ducks are the most abundant group of waterfowl that overwinter in the shallow wetlands and ponds of San Francisco Bay (SFB). Species within this group are primarily omnivorous, feeding on both plant material and macroinvertebrate prey by “tipping” to access benthic foods in bottom sediments or by foraging in the water column. Although the majority of these ducks are migratory, smaller numbers also nest locally in the SFB. These species vary in body size, ranging from the large mallard ( Anas platyrhynchos ) to the small green-winged teal ( Anas crecca ). Other dabbling duck species present in the SFB include American wigeon ( Anas americana ), gadwall ( Anas strepera ), cinnamon teal ( Anas cyanoptera ), northern shoveler ( Anas clypeata ), northern pintail ( Anas acuta ), and wood duck ( Aix sponsa ). Most of these dabbling duck species are known to breed in the SFB with the exception of the American wigeon and green-winged teal. However, the majority of wintering ducks originate from breeding grounds in the Central Valley of California, Pacific Coast States, Alaska, and Intermountain States/provinces, prairie potholes, and boreal forest. Their wintering populations in SFB are greatest between October and January, and dabbling duck species are found in all SFB regions. However, most dabbling duck use is associated with former salt production ponds and in the north and south bays, and managed wetlands of the Suisun Marsh.

California

Forest cover influences dispersal distance of white-tailed deer

Animal dispersal patterns influence gene flow, disease spread, population dynamics, spread of invasive species, and establishment of rare or endangered species. Although differences in dispersal distances among taxa have been reported, few studies have described plasticity of dispersal distance among populations of a single species. In 2002-2003, we radiomarked 308 juvenile (7- to 10-month-old), male white-tailed deer (Odocoileus virginianus) in 2 study areas in Pennsylvania. By using a meta-analysis approach, we compared dispersal rates and distances from these populations together with published reports of 10 other nonmigratory populations of white-tailed deer. Population density did not influence dispersal rate or dispersal distance, nor did forest cover influence dispersal rate. However, average (r2 = 0.94, P < 0.001, d.f. = 9) and maximum (r2 = 0.86, P = 0.001, d.f. = 7) dispersal distances of juvenile male deer were greater in habitats with less forest cover. Hence, dispersal behavior of this habitat generalist varies, and use of landscape data to predict population-specific dispersal distances may aid efforts to model population spread, gene flow, or disease transmission. ?? 2005 American Society of Mammalogists.

Journal of Mammalogy

An overview of fire in the Sierra Nevada

Fire, ignited by lightning and Native Americans, was common in the Sierra Nevada prior to 20th century suppression efforts. Presettlement fire return intervals were generally less than 20 years throughout a broad zone extending from the foothills through the mixed conifer forests. In the 20th century, the areal extent of fire was greatly reduced. This reduction in fire activity, coupled with the selective harvest of many large pines, produced forests which today are denser, with generally smaller trees, and have higher proportions of white fir and incense cedar than were present historically. These changes have almost certainly increased the levels of fuel, both on the forest floor and “ladder fuels”—small trees and brush which carry the fire into the forest canopy. Increases in fuel, coupled with efficient suppression of low and moderate intensity fires, has led to an increase in general fire severity. We suggest extensive modification of forest structure will be necessary to minimize severe fires in the future. In high-risk areas, landscapes should be modified both to reduce fire severity and to increase suppression effectiveness. We recommend thinning and underburning to reduce fire-related tree mortality coupled with strategically placed defensible fuel profile zones (DFPZs). DFPZs are areas in which forest structure and fuels have been modified to reduce flame length and “spotting”, allowing effective suppression. This chapter is an overview of work by the fire-subgroup of the Sierra Nevada Ecosystem Project. Details concerning these findings are found in Skinner and Chang 1996; Chang 1996; Husari and McKelvey 1996; McKelvey and Busse 1996; Erman and Jones 1996; van Wagtendonk 1996; and Weatherspoon 1996.

California

The effects of management practices on grassland birds

Since the mid-1960s, populations of grassland birds have been declining more precipitously than any other group of birds in North America. These long-term declines highlight the need to better understand the habitat requirements of grassland birds and how management practices affect individual species and their habitats. Although resource managers have long recognized that every management approach contains inherent advantages and disadvantages, depending on the species in question, they are often faced with making critical management decisions armed with little or no information. The need for information on management and its effects on grassland birds was identified by the U.S. Prairie Pothole Joint Venture, a part of the North American Waterfowl Management Plan, in support of its objective to stabilize or increase populations of declining grassland- and wetland-associated wildlife species in the Prairie Pothole Region. In 1996, scientists from the U.S. Geological Survey’s Northern Prairie Wildlife Research Center began a long-term, collaborative effort to review and synthesize literature on the effects of management practices on grassland bird species. Major funding for this effort was provided by the Prairie Pothole Joint Venture, U.S. Fish and Wildlife Service, and the U.S. Geological Survey; additional funding was provided by the U.S. Forest Service, The Nature Conservancy, and the Plains and Potholes Landscape Conservation Cooperative. This compendium on “The Effects of Management Practices on Grassland Birds” is a culmination of that work. More than 6,000 published and unpublished publications have been consulted and several thousand publications have been incorporated and synthesized in species accounts for 40 North American grassland bird species. The 40 species represent a taxonomically diverse group that includes grouse, shorebirds, owls, diurnal raptors, and many songbirds. The focus of this effort is on management of breeding habitat, with an emphasis on the Great Plains. The accounts provide land managers with a summary of information on the effects of specific management practices on grassland birds and help to identify the most critical research gaps in our understanding of grassland bird ecology, habitat needs, and responses to management practices. This compendium is organized into three primary sections: an introduction, species accounts, and a concluding chapter. The introduction provides an overview of grasslands, the processes under which grasslands formed, the influence of anthropogenic changes to grasslands, the effects of those changes on grassland bird populations, and the management tools available to land managers. The bulk of this compendium is the individual species accounts, covering 40 species of North American grassland birds arranged in taxonomic order. Each species account includes information on species range, suitable breeding habitat, area requirements and landscape associations, breeding-season phenology, species’ response to management, and management recommendations. Information on rates of brood parasitism by the Brown-headed Cowbird ( Molothrus ater ) in grassland bird nests is summarized in a chapter at the end of this report. The final chapter includes concluding remarks concerning habitat requirements and management effects on grassland birds.

Professional Paper

Biogeography of fire regimes in western US conifer forests: A trait-based approach

Aim Functional traits are a critical link between species distributions and the ecosystem processes that structure those species’ niches. Concurrent increases in the availability of functional trait data and our ability to model species distributions present an opportunity to develop functional trait biogeography, i.e. the mapping of functional traits across space. Functional trait biogeography can improve process-based predictions about the resistance of certain species assemblages to changing environmental conditions across landscape scales. We illustrate this concept by developing the first trait-based, quantitative ranking of fire resistance (adult tree survival) in North American conifer species, and mapping that fire resistance across space. Location and Time period Western Continental United States, present-day. Major taxa studied 29 common conifer tree species. Methods We compiled six traits for each species: three relating to tree morphology and three relating to litter flammability. We combined these traits into a single fire resistance score, and used community-weighted averaging to estimate the fire resistance scores of different forest communities, using interpolated species distribution and relative abundance data. Results Species associated with historically frequent fire have high fire resistance scores (e.g., Pinus ponderosa), reflected by thick bark, tall crowns, and flammable litter. Species associated with subalpine or arid conditions have low fire resistance scores (e.g., Picea engelmannii and Pinus edulis), reflected by thin bark, short stature, poor self-pruning and low litter flammability. A map of forest community fire resistance across the western US reveals agreement with independent assessments of historical fire regimes, while also identifying areas where community-wide species traits may be mismatched with historical fire regimes. Main conclusions Quantifying the functional traits that confer resistance to tree-killing fire provides a direct link between ecosystem disturbance and community resistance. Understanding this link is critical to evaluating long-term resilience of different forest types under dynamic fire regimes. Our work represents the first known spatial representation of fire-resistance traits at a regional scale, and as such provides a link between functional traits and biogeography relevant to a critical ecosystem process.

Global Ecology and Biogeography

Liana habitat and host preferences in northern temperate forests

Lianas and other climbers are important ecological and structural components of forest communities. Like other plants, their abundance in a given habitat depends on a variety of factors, such as light, soil moisture and nutrients. However, since lianas require external support, host tree characteristics also influence their distribution. Lianas are conspicuous life forms in tropical regions, but in temperate areas, where they are less prominent, little is known about factors that control their distributions in these forests. We surveyed the climbing plant species in 20 mature (100 years and greater) forested habitats in the Midwest USA at a variety of levels from simple presence/absence, to ground layer abundances, to those species that had ascended trees. We also examined attributes of the tree species with climbers attached to them. Using cluster analysis, we distinguished five different tree communities in our survey locations. We determined that 25% of the trees we surveyed had one or more lianas attached to it, with Parthenocissus quinquefolia (Virginia creeper) the most common climbing species encountered. Canopy cover and soil attributes both influenced climber species presence/absence and ground layer climber abundance. The proportion of liana species of a given climbing type (roots, stem twiner, tendril climber) was significantly related to the DBH of the host tree, with more root climbers and fewer stem and tendril climbers on large trees. In general, the DBH of climbing lianas had a significant positive relationship to the DBH of the host tree; however this varied by the identity of the liana and the tree species. The greater the DBH of the host tree, the higher the probability that it was colonized by one or more lianas, with tree species such as Pinus banksiana (jack pine) and Quercus alba (white oak) being more susceptible to liana colonization than others. Finally, some liana species such as Celastrus scandens (American bittersweet) showed a preference for certain tree species (i.e., P. banksiana) as hosts. The information obtained about the relationship between the tree and climber community in this study provides insight into some of the factors that influence liana distributions in understudied temperate forest habitats and how lianas contribute to the structure of these mature forests. In addition, these data can provide a point of comparison to other liana communities in both temperate and tropical regions.

Forest Ecology and Management

Effects of beaver dams and ponds on water quality in urban streams of the Tualatin River Basin, northwestern Oregon

Significant Findings American beavers ( Castor canadensis ) are native to the Pacific Northwest, and their populations have increased in many locations after being nearly removed by historical trapping. Beaver dams have well-documented effects on water quality in forested streams, but their effects on water quality in urban streams have not been well characterized. The study documented the water-quality effects of beaver dams and beaver activity in selected urban streams of the Tualatin River Basin in northwestern Oregon. Variations in water quality upstream, downstream, and within ponded areas behind beaver dams were quantified with continuous measurements of water temperature, specific conductance, dissolved oxygen, and pH from May 2016 to November 2017 in two intensively monitored reaches of urban streams (Fanno and Bronson Creeks). Five other urban stream reaches were monitored upstream and downstream from beaver ponds using water-temperature sensors to document water-temperature changes in additional beaver-affected reaches. Spatial water-quality variations within a beaver pond along Fanno Creek were characterized in more detail on four hot summer afternoons with numerous measurements of temperature and dissolved oxygen. Results from the study were used to document and derive insights from measured patterns in the water-quality data, such as the following: Shallow and unshaded ponds created by beaver dams (such as at Fanno Creek) capture more solar radiation than channelized and shaded stream reaches, resulting in substantially warmer water temperatures during summer. A large beaver pond along Fanno Creek had variable water depths and riparian shade, resulting in a wide range of water-temperature and dissolved-oxygen conditions. Some conditions measured during summer were stressful for sensitive aquatic species, with temperatures higher than 18 degrees Celsius (°C) and (or) dissolved-oxygen concentrations less than 2 milligrams per liter (mg/L). Although water flowing out of beaver-affected reaches was warmer than water entering the reaches, water tended to cool downstream when streams returned to a more-shaded, confined channel (such as at Fanno Creek) or received subsurface inputs and exchange (such as at Bronson Creek). The magnitude of water-temperature increases in beaver ponds depended on site characteristics, such as the surface area and depth of the ponds, the extent of riparian shade, and the potential for subsurface exchange. Beaver dams caused Fanno Creek to overflow its banks, resulting in a wide and shallow floodplain pond that had little riparian shade in most places. In contrast, Bronson Creek remained in its stream channel behind the beaver dams, was often deeper and more shaded, and had more subsurface water exchange than the Fanno Creek reach. Despite the longer reach length, these differences caused the Bronson Creek reach to warm less than the Fanno Creek reach. Beaver dams trapped sediment and organic matter, and ponding increased the time available for organic matter to decompose in the trapped sediments, thus consuming dissolved oxygen. The construction of a beaver dam in the monitored reach of Bronson Creek during the study caused an increase in oxygen demands and a rapid decrease in dissolved-oxygen concentrations. Dissolved-oxygen concentrations in monitored study reaches were affected by primary production (algal photosynthesis) and respiration, and hypoxic (low to zero dissolved oxygen) conditions were measured in the two intensively monitored reaches for multiple weeks during summer. Two single-station stream metabolism models were used to calculate net ecosystem production in the two intensively monitored urban stream reaches. Results indicated that the reaches were heterotrophic, with respiration demands consuming more oxygen than what was produced through photosynthesis. Beaver ponds at all sites had a measurable effect on water quality, causing wider ranges in temperature and dissolved-oxygen conditions than would have occurred without ponding. That wider range (both spatially and temporally) might support a variety of aquatic organisms, but also is likely to increase the frequency of water-quality standard violations in those beaver-affected reaches. Any water-quality effects or standard violations associated with beaver dams and ponds, however, may be localized or transitory along the stream network. Restored stream reaches can attract beavers. Considering the potential for beaver colonization when designing habitat restoration plans will require evaluation of the potential water-quality changes associated with beaver dams and ponds alongside other desired physical changes.

Oregon

Demographic Characteristics of a Maine Woodcock Population and Effects of Habitat Management

A population of American woodcock (Scolopax minor) was studied on a 3,401-ha area of the Moosehorn National Wildlife Refuge in northeastern Maine from 1976 through 1985. During 1976-83, from 4 to 64 clearcuts were created each year, opening up large contiguous blocks of forest. A combination of mist nets, ground traps, nightlighting techniques, and trained dogs were used to capture and band 1,884 birds during the first 5 years. Capture and recapture data (totaling 3,009 observations) were used with both demographically closed and open population models to estimate population size and, for open population models, summer survival. Flying young, especially young males, represented the greatest proportion of all captures; analysis showed that young males were more prone to capture than young females. Male courtship began about 24 March each year, usually when there was still snow in wooded areas. Males ~2 years old dominated singing grounds during April each year, but this situation changed and first-year males dominated singing grounds in May. Singing males shifted from older established singing grounds to new clearcuts soon after we initiated forest management. Many males were subdominant at singing grounds despite an abundance of unoccupied openings. Three hundred adult females were captured and, except for 1978, the majority were ~2 years old. The year in which female homing rate was lowest(1979) was preceded by the year with the largest number of l-year-old brood female captures and a summer drought. Summer survival of young was lowest in 1978 and was attributed to summer drought. The year 1979 had an abnormally cool and wet spring, and was the poorest for production of young. Capture ratios of young-to-adult females obtained by nightlighting could be used to predict production on our study area. Closed population model estimates did not seem to fit either young or adult data sets well. Instead, a partially open capture-recapture model that allowed death but no immigration seemed to fit best. Only the number of males in the population changed significantly during the study. An increase from 88 males in 1976 to 156 in 1980 was attributed to habitat management. Singingmale surveys on our area detected little change in the number of singing males, but our independent population estimates from mark-recapture data showed a larger total male population by 1980. Annual density estimates for all age and sex classes ranged from 19 to 25 birds/l00 ha. A hypothesis on the breeding system of the American woodcock is presented as well as a discussion of management implications, including the importance of creating high-quality habitat on private lands.

Fish and Wildlife Research

Weathering controls on mechanisms of carbon storage in grassland soils

On a sequence of soils developed under similar vegetation, temperature, and precipitation conditions, but with variations in mineralogical properties, we use organic carbon and 14C inventories to examine mineral protection of soil organic carbon. In these soils, 14C data indicate that the creation of slow-cycling carbon can be modeled as occurring through reaction of organic ligands with Al3+ and Fe3+ cations in the upper horizons, followed by sorption to amorphous inorganic Al compounds at depth. Only one of these processes, the chelation Al3+ and Fe3+ by organic ligands, is linked to large carbon stocks. Organic ligands stabilized by this process traverse the soil column as dissolved organic carbon (both from surface horizons and root exudates). At our moist grassland site, this chelation and transport process is very strongly correlated with the storage and long-term stabilization of soil organic carbon. Our 14C results show that the mechanisms of organic carbon transport and storage at this site follow a classic model previously believed to only be significant in a single soil order (Spodosols), and closely related to the presence of forests. The presence of this process in the grassland Alfisol, Inceptisol, and Mollisol soils of this chronosequence suggests that this process is a more significant control on organic carbon storage than previously thought. Copyright 2004 by the American Geophysical Union.

Global Biogeochemical Cycles

U.S. Geological Survey science strategy to address white-nose syndrome and bat health in 2025–2029

Since its discovery in 2006, the fungal disease known as white-nose syndrome (WNS) has killed millions of bats. Of the 47 bat species native to the conterminous United States, Alaska, Hawaii, and Canada, 12 have been affected by WNS, including 3 endangered species and 1 proposed endangered species. WNS has also been detected in 40 States and 9 Canadian Provinces. U.S. Geological Survey (USGS) scientists have been critical in identifying the causal fungus for WNS ( Pseudogymnoascus destructans [Pd]), characterizing the effects of WNS, and tracking the spread of Pd in many bat populations in North America. The mission of the USGS WNS and Bat Health Science Team is to deliver integrated science in order to build resiliency into free-ranging bat populations through more effective WNS management, build capacity for bat health science, and enhance bat health information sharing across USGS science centers and cooperative research units as well as with stakeholders. The USGS can play an important role in supporting regional and national capacity building by providing resources and guidance to local, State, and Tribal management entities and by providing tools to enhance disease management. The USGS Ecosystems Mission Area’s Biological Threats and Invasive Species Research Program is the lead Federal program for free-ranging wildlife disease research and surveillance. As of 2024, guided by the science priorities set by the WNS Steering Committee, USGS scientists are engaged in a nationwide response to WNS. This work is done in close coordination with our partners at the U.S. Fish and Wildlife Service, National Park Service, Bureau of Land Management, U.S. Forest Service of the U.S. Department of Agriculture, U.S. Department of Defense, as well as State and Tribal agencies. In addition to conducting WNS research, the USGS is mapping the spread of WNS and coordinating the North American Bat Monitoring Program (NABat) to understand how WNS and other stressors affect the status and trends of native bats across their range. The USGS is supporting the national WNS response through four science goals: (1) provide situational awareness on the health of bat populations; (2) conduct ecological studies of bats along the gradient of disease vulnerability; (3) contribute actionable science to enhance the resiliency of bat populations; and (4) implement an adaptive, holistic approach to bat health.

Circular