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At least 235 records · Page 13Linked to original sources

The confluences of ideas leading to, and the flow of ideas emerging from, individual-based modeling of riverine fishes

In this review article, we trace the history of events leading to the development of individual-based models (IBMs) to represent aquatic organisms in rivers and streams. As a metaphor, we present this history as a series of confluences between individual scientists (tributaries) sharing ideas. We describe contributions of these models to science and management. One iconic feature of river IBMs is the linkage between flow and the physical habitat experienced by individual animals, and the first model that focused on this linkage is briefly described. We continue by reviewing the contributions of riverine IBMs to eight broad areas of scientific inquiry. The first four areas include research to understand 1) the effects of flow regimes on fish populations, 2) species interactions (e.g., size-mediated competition and predation), 3) fish movement and habitat selection, and 4) contaminant and water quality impacts on populations. Next, we review research using IBMs 5) to guide conservation biology of imperiled taxa through population viability analysis, including research 6) to understand river fragmentation by dams and reconnection, 7) to understand genetic outcomes for riverine metapopulations, and 8) to anticipate the future effects of temperature and climate change. This rich body of literature has contributed to both theoretical insights (e.g., about animal behavior and life history) and applied insights (e.g., population-level effects of flow regimes, temperature, and the effects of hydropower and other industries that share rivers with aquatic biota). We finish by exploring promising branches that lie ahead in the braided, downstream channel that represents future river modeling research.

Ecological Modelling

Segmentation and supercycles: A catalog of earthquake rupture patterns from the Sumatran Sunda Megathrust and other well-studied faults worldwide

After more than 100 years of earthquake research, earthquake forecasting, which relies on knowledge of past fault rupture patterns, has become the foundation for societal defense against seismic natural disasters. A concept that has come into focus more recently is that rupture segmentation and cyclicity can be complex, and that a characteristic earthquake model is too simple to adequately describe much of fault behavior. Nevertheless, recognizable patterns in earthquake recurrence emerge from long, high resolution, spatially distributed chronologies. Researchers now seek to discover the maximum, minimum, and typical rupture areas; the distribution, variability, and spatial applicability of recurrence intervals; and patterns of earthquake clustering in space and time. The term “supercycle” has been used to describe repeating longer periods of elastic strain accumulation and release that involve multiple fault ruptures. However, this term has become very broadly applied, lumping together several distinct phenomena that likely have disparate underlying causes. We divide earthquake cycle behavior into four major classes that have different implications for seismic hazard and fault mechanics: 1) quasi-periodic similar ruptures, 2) clustered similar ruptures, 3) clustered complementary ruptures/rupture cascades, and 4) superimposed cycles. “Segmentation” is likewise an ambiguous term; we identify “master segments” and “asperities” as defined by barriers to fault rupture. These barriers may be persistent (rarely or never traversed), frequent (occasionally traversed), or ephemeral (changing location from cycle to cycle). We compile a catalog of the historical and paleoseismic evidence that currently exists for each of these types of behavior on major well-studied faults worldwide. Due to the unique level of paleoseismic and paleogeodetic detail provided by the coral microatoll technique, the Sumatran Sunda megathrust provides one of the most complete records over multiple earthquake rupture cycles. Long historical records of earthquakes along the South American and Japanese subduction zones are also vital contributors to our catalog, along with additional data compiled from subduction zones in Cascadia, Alaska, and Middle America, as well as the North Anatolian and Dead Sea strike-slip faults in the Middle East. We find that persistent and frequent barriers, rupture cascades, superimposed cycles, and quasi-periodic similar ruptures are common features of most major faults. Clustered similar ruptures do not appear to be common, but broad overlap zones between neighboring segments do occur. Barrier regions accommodate slip through reduced interseismic coupling, slow slip events, and/or smaller more localized ruptures, and are frequently associated with structural features such as subducting seafloor relief or fault trace discontinuities. This catalog of observations provides a basis for exploring and modeling root causes of rupture segmentation and cycle behavior. We expect that researchers will recognize similar behavior styles on other major faults around the world.

Quaternary Science Reviews

Restoration research actions to address rapid change in drylands: Insights from the Colorado Plateau

The rapid intensification of ecological extremes in response to climate change and human land use is perhaps nowhere more apparent than in drylands, including the semiarid region of the Colorado Plateau in the southwestern United States. Here, we describe research directions to aid in the restoration of Colorado Plateau ecosystems during the UN Decade on Ecosystem Restoration (2021–2030) that 1) address high levels of heterogeneity 2) explore simultaneous global change drivers 3) are co-produced with a broad range of partners and 4) center Indigenous ways of knowing. We highlight restoration research efforts led by early career scientists grappling with informing management actions in a region where a rapidly changing climate intersects with historic grazing and continued land use pressures to create novel ecological extremes. We highlight restoration research efforts led by early career researchers grappling with informing management actions in a region where novel ecological extremes are the result of historic grazing, continued land-use pressures, and a rapidly changing climate.

Arizona, Colorado, New Mexico, Utah

A policy evaluation tool: Management of a multiaquifer system using controlled stream recharge

A model for the optimal allocation of water resources was developed for a multiaquifer groundwater and surface water system near Livermore, California. The complex groundwater system was analyzed using a transient, quasi-three-dimensional model that considers the nonlinear behavior of the unconfined aquifer. The surface water system consists of a reservoir that discharges water to three streams which in turn recharge the upper aquifer. Nonlinear streamflow-recharge relationships were developed based upon synoptic field measurements of streamflow. The management model uses constrained optimization to minimize the cost of allocating surface water subject to physical and economic restrictions. Results indicate that a combined hydrologic and economic management model can be used to evaluate management practices of a complex hydrogeologic system. Questions can be posed which either would be impossible or extremely difficult to solve without the management model. We demonstrate the utility of such a model in three areas. First, the efficiency of intra-basin water allocations is evaluated. Second, critical factors that control management decisions of the basin are identified. Third, the influence of economic incentives that can best satisfy the conflicting objectives of various water users is explored.

Water Resources Research

Fluorine

Fluorine compounds are essential in numerous chemical and manufacturing processes. Fluorspar is the commercial name for fluorite (isometric CaF 2 ), which is the only fluorine mineral that is mined on a large scale. Fluorspar is used directly as a fluxing material and as an additive in different manufacturing processes. It is the source of fluorine in the production of hydrogen fluoride or hydrofluoric acid, which is used as the feedstock for numerous organic and inorganic chemical compounds. The United States was the world’s leading producer of fluorspar until the mid-1950s. In the mid-1970s, the U.S. fluorspar mining industry began to decline because of foreign competition. By 1982, there was essentially only a single U.S. producer left, and that company ceased mining in 1996. Consumption of fluorspar in the United States peaked in the early 1970s, which was also the peak period of U.S. steel production. Since then, U.S. fluorspar consumption has decreased substantially; the United States has nonetheless increased its imports of downstream fluorine compounds, such as, in order of tonnage imported, hydrofluoric acid, aluminum fluoride, and cryolite. This combination of no U.S. production (until recently) and high levels of consumption has made the United States the world’s leading fluorspar-importing country, in all its various forms. The number of fluorspar-exporting countries has decreased substantially in recent decades, and, as a result, the United States has become dependent on just a few countries to supply its needs. In 2013, the United States imported the majority of its fluorspar from three countries, which were, in descending order of the amount imported, Mexico, China, and South Africa. Geologically, in igneous systems, fluorine is one of a number of elements that are “incompatible.” These incompatible elements become concentrated in the residual magma while the common silicates crystallize upon magma ascent and cooling, leading to relatively high fluorine concentrations in the more evolved or differentiated igneous rocks and in hydrothermal deposits associated with those evolved igneous rocks. In sedimentary rocks, fluorine’s highest concentrations are found in phosphorites because fluorine substitutes for hydroxyl ions in apatite, which leads to fluorine concentrations of, typically, from 2 to 4 weight percent in phosphorites. Because of the presence of fluorine, phosphate fertilizer manufacturers can produce a fluorosilicic acid byproduct. Most deposits mined for fluorine are hydrothermal, however, and consist of fluorine minerals that precipitated from hot water. Magmatic brines and brines from deep within sedimentary basins that have high concentrations of dissolved fluoride are the mineralizing fluids for various types of hydrothermal fluorspar deposits. Relatively dilute hydrothermal fluids that formed in some volcanic rocks can also transport sufficient fluoride to form a high-grade fluorspar deposit. Fluorite has low solubility in a common range of hydrothermal temperatures, particularly from about 160 degrees Celsius (°C) down to 60 °C. The increasing fluorite solubility below 60 °C partly explains why some water with exceptionally high levels of dissolved fluorine are found even at ambient temperatures in evaporitic lake basins in some East African Rift valleys in Kenya and Tanzania. The geologic conditions that led to the high concentrations there are known to exist in a number of other places in the world as well, including, perhaps, places in the Basin and Range province of the United States. Eight minerals or mineral groups have sufficient fluorine in their structures to be considered as possible ores of the element; they are bastnaesite (also spelled bastnäsite; and other fluorocarbonates), cryolite, sellaite, villiaumite, fluorite, fluorapatite (in phosphorites), various phyllosilicates, and topaz. Fluorite is currently the only mineral that is mined for fluorine, and nomineral except fluorite is likely to become a source of commercially produced fluorine as a primary product as long as supplies from relatively thick and high-grade fluorite deposits continue to be available. At least seven classes (which include one subclass) of hydrothermal fluorite deposits are recognized; they are classified according to their tectonic and (or) magmatic settings, as follows: (1) carbonatite-related fluorspar deposits; (2) alkaline-intrusion-related fluorspar deposits; (3) alkaline-volcanic-related epithermal fluorspar deposits; (4) Mississippi Valley-type fluorspar deposits (and a subclass of salt-related carbonate-hosted fluorspar deposits); (5) fluorspar deposits related to strongly differentiated granites; (6) subalkaline-volcanic-related epithermal fluospar deposits; and (7) fluorspar deposits that appear to be conformable within tuffaceous limy lacustrine sediments. An eighth class (not hydrothermal) is that of fluorspar deposits concentrated in soils and weathered zones; that is, residual fluorspar deposits. Generally, fluorspar deposits related to strongly differentiated granites have larger tonnages and lower grades than carbonatite-related fluorspar deposits, which, in turn, have larger tonnages and lower grades than fluorspar vein deposits from various other classes. The United States has a few identified resources of fluorspar, most notably the Klondike II property in the Illinois- Kentucky fluorspar district located about 8 kilometers southwest of Salem, Kentucky, which has a large vein that contains at least 1.6 million metric tons at a grade of 60 percent CaF 2 (Feytis, 2009). Additional fluorspar resources of lower grade but larger tonnage have been identified at Hicks Dome in the Illinois-Kentucky fluorspar district and at Lost River near the western tip of the Seward Peninsula in Alaska, along with a couple of dozen smaller, higher grade resources. Internationally, new mines that either opened before the beginning of 2013 or were scheduled to open soon after that time include the Nui Phao tungsten-fluorspar-bismuth-copper-gold deposit in northern Vietnam; the St. Lawrence project in Newfoundland, Canada, which is located in a well-known fluorspar district; the Bamianshan deposit, which is related to a strongly differentiated granite in northwestern Zhejiang Province, China, near some of that Province’s large, subalkaline-volcanic-related epithermal veins; and the Nokeng project in South Africa, which is also related to a strongly differentiated granite. Other deposits in northwestern Australia, Nevada (United States), Norway, South Africa, and Sweden have been identified and could be put into production within just a few years. Among undiscovered resources, an interesting possibility might be to produce a fluorine product from evaporitic, high-fluorine, high-pH sodium-carbonate brines like Lake Magadi (Kenya) and Lake Natron (Tanzania) in Africa’s Eastern Rift Valley. In addition, apparently conformable fluorspar deposits in tuffaceous limy lacustrine sediments, such as those in Italy, are likely to occur in similar young alkalic volcanic settings elsewhere in the world. Modern geophysical and geochemical exploration techniques have typically not been brought to bear in exploration for new fluorspar deposits, although such techniques are likely to be used in future exploration. The tendency for fluorine to dissolve in significant concentrations in water at low temperature allows both surface water and groundwater to be used as sampling media in geochemical exploration. Evolved granite-related fluorspar deposits may be particularly susceptible to geophysical exploration methods because crystalline rocks that form a basement to sedimentary sections can be approximately defined with gravity and magnetic methods, and magnetite-bearing skarns can be directly detected with magnetic surveys. Environmental considerations of fluorine mining focus especially on drinking water, where high fluorine concentrations can lead to tooth decay; dental and skeletal fluorosis; and bone and cartilage conditions, including genu valgum, which is the crippling bone deformity more commonly known as knock knee. Trace amounts of other elements in fluorspar ores are a concern at some deposits; for example, high beryllium concentrations in alkaline-volcanic-related epithermal deposits or high cadmium concentrations associated with Mississippi Valley-type and salt-related carbonate-hosted fluorspar deposits. Future research might include testing whether fluorine can be extracted economically from high-pH, sodium-carbonate brines and exploring for new occurrences of apparently conformable fluorspar deposits in tuffaceous limy lacustrine sediments outside of the Latium Region of Italy. Other promising new areas of research could be studies of fluorspar deposit fluid inclusion compositions by quadrupole mass spectrometry, by noble gas mass spectrometry on irradiated fluid inclusions, or by chlorine isotopes, while also measuring the chemistry of the same fluid inclusions either by bulk crush-and-leach methods or by laser ablation-inductively coupled plasma mass spectrometry. Advanced studies of fluid inclusion chemistry could be applied beneficially to some of the enigmatic large epithermal fluorspar veins at various places in the world, where they might determine those deposits’ possible relationships to igneous intrusions, or to dissolved salt, or to heated meteoric water in volcanic sections, or perhaps to all three. This knowledge could help focus new exploration.

Professional Paper

Development of a bioenergetics model for age-0 American shad

Bioenergetics modeling can be used as a tool to investigate the impact of non-native age-0 American shad ( Alosa sapidissima ) on reservoir and estuary food webs. The model can increase our understanding of how these fish influence lower trophic levels as well as predatory fish populations that feed on juvenile salmonids. Bioenergetics modeling can be used to investigate ecological processes, evaluate alternative research hypotheses, provide decision support, and quantitative prediction. Bioenergetics modeling has proven to be extremely useful in fisheries research (Ney et al. 1993,Chips and Wahl 2008, Petersen et al. 2008). If growth and diet parameters are known, the bioenergetics model can be used to quantify the relative amount of zooplankton or insects consumed by age-0 American shad. When linked with spatial and temporal information on fish abundance, model output can guide inferential hypothesis development to demonstrate where the greatest impacts of age-0 American shad might occur. Bioenergetics modeling is particularly useful when research questions involve multiple species and trophic levels (e.g. plankton communities). Bioenergetics models are mass-balance equations where the energy acquired from food is partitioned between maintenance costs, waste products, and growth (Winberg 1956). Specifically, the Wisconsin bioenergetics model (Hanson et al. 1997) is widely used in fisheries science. Researchers have extensively tested, reviewed, and improved on this modeling approach for over 30 years (Petersen et al. 2008). Development of a bioenergetics model for any species requires three key components: 1) determine physiological parameters for the model through laboratory experiments or incorporate data from a closely related species, 2) corroboration of the model with growth and consumption estimates from independent research, and 3) error analysis of model parameters. Wisconsin bioenergetics models have been parameterized for many of the salmonids and predatory fishes encountered in the lower Columbia River (Petersen and Ward 1999). The Wisconsin bioenergetics model has not been developed for American shad, however Limburg (1996) parameterized a simplified bioenergetics growth model for this species. A common application for the Wisconsin bioenergetics model is to estimate the consumption or growth of a fish population under different temperature and feeding scenarios (Ney 1993). One advantage of the bioenergetics approach is that consumption can be estimated without direct field measurements of predation rate (prey·predator -1 · day -1 ; Petersen and Ward 1999). Field estimates of fish consumption are time consuming and costly to determine, and estimates may show wide variance due to environmental and sampling variability. However, the consumption parameters used in a newly developed bioenergetics model must be verified with field and laboratory estimates of consumption (Ney 1993). The objective of this research was to parameterize a Wisconsin bioenergetics model for age-0 American shad using published physiological data on American shad and closely related alosine species. The American shad bioenergetics model will be used as a tool to explore various hypotheses about how age-0 American shad directly and indirectly affect Columbia River salmon through ecological interactions in lower Columbia River food webs. One over-arching focus of the larger research project was to identify potential interactions between age-0 American shad and juvenile salmonids, addressing potential outcomes through bioenergetics modeling scenarios. This report contains two bioenergetics modeling applications to demonstrate how these models can be used to address management questions and direct research effort. The first modeling application uses the American shad bioenergetics model described in this report to explore prey consumption by age-0 American shad (Chapter 1, this report). Dietary data on age-0 American shad and previously published reports on the diet of juvenile fall Chinook salmon (Rondorf et al. 1990, USGS unpublished data) suggested there might be considerable dietary overlap between these species in the lower Columbia River. The U.S. Geological Survey (USGS) was interested in using the American shad bioenergetics model to explore hypotheses concerning dietary overlap between age-0 American shad and emigrating fall Chinook salmon. The second modeling application uses the fall Chinook salmon bioenergetics model (Koehler et al. 2006) to explore the growth potential of juvenile fall Chinook salmon predating on age-0 American shad in the lower Columbia River. This modeling was based dietary information on a small number of age-0 fall Chinook salmon (n = 13) collected in John Day Reservoir in 1994 - 1996 (unpublished USGS data). Analysis of this dietary data found that these salmonids were feeding primarily on age-0 American shad (> 75% by weight).

Oregon

The role of the Next Generation Lunar Scientists and Engineers (NextGen) group in lunar science and exploration

Founded in 2008, the Next Generation Lunar Scientists and Engineers (NextGen) is a group of students and early career professionals who have a vision and passion for lunar science and exploration. NextGen organizes professional development opportunities through workshops and networking events that are designed to provide resources and training for scientists and engineers so that they are prepared to lead international lunar science and exploration programs. NextGen also provides a network of professional support and opportunities for the younger generation to lead in the field and to learn from more experienced generations of lunar scientists and engineers. Members of NextGen are actively engaged in scientific research, mission formulation/execution, community outreach, and professional activities. With the United States on the brink of a new era of lunar exploration, and many international space agencies preparing to send spacecraft to the Moon, NASA and the lunar community have recognized the importance of training and nurturing the next generation of lunar scientists and engineers. As the future workforce, it is imperative that students and early career professionals receive continued and increased support from NASA, industry, and the lunar community as a whole.

Bulletin of the AAS

Rock chemistry and fluid inclusion studies as exploration tools for ore deposits in the Sila batholith, southern Italy

The Sila batholith is the focus of an extensive petrogenetic research program, which includes an assessment of its potential to host granite-related ore deposits. Univariate and multivariate statistical techniques were applied to major- and minor-element rock geochemical data. The analysis indicates that the highest potential for mineralization occurs in corundum-normative, peraluminous, unfoliated, relatively late-stage plutons. The plutons are enriched in Rb, Nb, Ta and U, but depleted in Fe, Mg and Sr. The K/Rb, Ba/Rb, Rb/Sr and Rb 3 /Ba·Sr·K indices and high R -factor scores of Si-K-Rb are typical of mineralized granitic rocks. A reconnaissance fluid inclusion study indicates that the sub-solidus rock was infiltrated by solutions of widely different temperatures (50–416°C) and variable salinities (0 to ∼26 wt.% NaCl equivalent). The higher-temperature solutions probably represent granite or magmatic-related Hercynian fluids, whereas the lower-temperature fluids may be either Hercynian or Alpine in age. Fluids with characteristics typical of mineralized “porphyry” systems have not been recognized.

Journal of Geochemical Exploration

Co-producing simulation models to inform resource management: a case study from southwest South Dakota

Simulation models can represent complexities of the real world and serve as virtual laboratories for asking “what if…?” questions about how systems might respond to different scenarios. However, simulation models have limited relevance to real-world applications when designed without input from people who could use the simulated scenarios to inform their decisions. Here, we report on a state-and-transition simulation model of vegetation dynamics that was coupled to a scenario planning process and co-produced by researchers, resource managers, local subject-matter experts, and climate change adaptation specialists to explore potential effects of climate scenarios and management alternatives on key resources in southwest South Dakota. Input from management partners and local experts was critical for representing key vegetation types, bison and cattle grazing, exotic plants, fire, and the effects of climate change and management on rangeland productivity and composition given the paucity of published data on many of these topics. By simulating multiple land management jurisdictions, climate scenarios, and management alternatives, the model highlighted important tradeoffs between grazer density and vegetation composition, as well as between the short- and long-term costs of invasive species management. It also pointed to impactful uncertainties related to the effects of fire and grazing on vegetation. More broadly, a scenario-based approach to model co-production bracketed the uncertainty associated with climate change and ensured that the most important (and impactful) uncertainties related to resource management were addressed. This cooperative study demonstrates six opportunities for scientists to engage users throughout the modeling process to improve model utility and relevance: (1) identifying focal dynamics and variables, (2) developing conceptual model(s), (3) parameterizing the simulation, (4) identifying relevant climate scenarios and management alternatives, (5) evaluating and refining the simulation, and (6) interpreting the results. We also reflect on lessons learned and offer several recommendations for future co-production efforts, with the aim of advancing the pursuit of usable science.

South Dakota

Predicted connectivity pathways between grizzly bear ecosystems in western Montana

Habitat and corridor mapping are key components of many conservation programs. Grizzly bear populations in the continental US are fragmented and connectivity among federal recovery areas is a conservation goal. Building on recent work, we modeled movements to predict areas of connectivity, using integrated step selection functions (iSSFs) developed from GPS-collared grizzly bears (F = 46, M = 19) in the Northern Continental Divide Ecosystem (NCDE). We applied iSSFs in a >300,000 km 2 area including the NCDE, Cabinet–Yaak (CYE), Bitterroot (BE), and Greater Yellowstone (GYE) Ecosystems. First, we simulated directed movements (randomized shortest paths with 3 levels of exploration) between start and end nodes across populations. Second, we simulated undirected movements from start nodes in the NCDE, CYE, or GYE (no predetermined end nodes). We summarized and binned results as classes 1 (lowest relative predicted use) – 10 (highest relative predicted use) and evaluated predictions using 127 outlier grizzly bear locations. Connectivity pathways were primarily associated with mountainous areas and secondarily with river and stream courses in open valleys. Values at outlier locations indicated good model fit and mean classes at outlier locations (≥7.4) and Spearman rank correlations (≥0.87) were highest for undirected simulations and directed simulations with the highest level of exploration. Our resulting predictive maps can facilitate on-the-ground application of this research for prioritizing habitat conservation, human-bear conflict mitigation, and transportation planning. Additionally, our overall modeling approach has utility for myriad species and conservation applications.

Montana

Mining geology of the Pond Creek seam, Pikeville Formation, Middle Pennsylvanian, in part of the Eastern Kentucky Coal Field, USA

The Pond Creek seam is one of the leading producers of coal in the Eastern Kentucky Coal Field. The geologic factors that affect mining were investigated in several underground mines and categorized in terms of coal thickness, coal quality, and roof control. The limits of mining and thick coal are defined by splitting along the margin of the coal body. Within the coal body, local thickness variation occurs because of (1) leader coal benches filling narrow, elongated depressions, (2) rider coal benches coming near to or merging with the main bench, (3) overthrust coal benches being included along paleochannel margins, (4) cutouts occuring beneath paleochannels, and (5) very hard and unusual rock partings occuring along narrow, elongated trends. In the study area, the coal is mostly mined as a compliance product: sulfur contents are less than 1% and ash yields are less than 10%. Local increases in sulfur occur beneath sandstones, and are inferred to represent post-depositional migration of fluids through porous sands into the coal. Run-of-mine quality is also affected by several mine-roof conditions and trends of densely concentrated rock partings, which lead to increased in- and out-of-seam dilution and overall ash content of the mined coal. Roof control is largely a function of a heterolithic facies mosaic of coastal-estuarine origin, regional fracture trends, and unloading stress related to varying mine depth beneath the surface. Lateral variability of roof facies is the rule in most mines. The largest falls occur beneath modern valleys and parallel fractures, along paleochannel margins, within tidally affected 'stackrock,' and beneath rider coals. Shale spalling, kettlebottoms, and falls within other more isolated facies also occur. Many of the lithofacies, and falls related to bedding weaknesses within or between lithofacies, occur along northeast-southwest trends, which can be projected in advance of mining. Fracture-related falls occur independently of lithofacies trends along northwest-southeast trends, especially beneath modern valleys where overburden thickness decreases sharply. Differentiating roof falls related to these trends can aid in predicting roof quality in advance of mining.The Pond Creek-Lower Elkhorn seam has been an important exploration target because it typically has very low sulfur contents and ash yields. Geologic research in several large Pond Creek mines suggested variability in roof quality and coal thickness. Due to mine access, geologic problems encountered during mining are documented and described.

International Journal of Coal Geology

Exploration of the canyon-incised continental margin of the northeastern United States reveals dynamic habitats and diverse communities

The continental margin off the northeastern United States (NEUS) contains numerous, topographically complex features that increase habitat heterogeneity across the region. However, the majority of these rugged features have never been surveyed, particularly using direct observations. During summer 2013, 31 Remotely-Operated Vehicle (ROV) dives were conducted from 494 to 3271 m depth across a variety of seafloor features to document communities and to infer geological processes that produced such features. The ROV surveyed six broad-scale habitat features, consisting of shelf-breaching canyons, slope-sourced canyons, inter-canyon areas, open-slope/landslide-scar areas, hydrocarbon seeps, and Mytilus Seamount. Four previously unknown chemosynthetic communities dominated by Bathymodiolus mussels were documented. Seafloor methane hydrate was observed at two seep sites. Multivariate analyses indicated that depth and broad-scale habitat significantly influenced megafaunal coral (58 taxa), demersal fish (69 taxa), and decapod crustacean (34 taxa) assemblages. Species richness of fishes and crustaceans significantly declined with depth, while there was no relationship between coral richness and depth. Turnover in assemblage structure occurred on the middle to lower slope at the approximate boundaries of water masses found previously in the region. Coral species richness was also an important variable explaining variation in fish and crustacean assemblages. Coral diversity may serve as an indicator of habitat suitability and variation in available niche diversity for these taxonomic groups. Our surveys added 24 putative coral species and three fishes to the known regional fauna, including the black coral Telopathes magna , the octocoral Metallogorgia melanotrichos and the fishes Gaidropsarus argentatus , Guttigadus latifrons , and Lepidion guentheri . Marine litter was observed on 81% of the dives, with at least 12 coral colonies entangled in debris. While initial exploration revealed the NEUS region to be both geologically dynamic and biologically diverse, further research into the abiotic conditions and the biotic interactions that influence species abundance and distribution is needed.

Northeastern United States, Gulf of Maine, Georges

Marine mineral resources of Pacific Islands— A review of the Exclusive Economic Zones of islands of U.S. affiliation, excluding the State of Hawaii

The United States Exclusive Economic Zone (EEZ) was established in 1983 and comprises all marine areas within 200 nautical miles (370 kilometers) of the nearest U.S. land. This vast area of 3.38 million square nautical miles (11.6 million square kilometers) is about 20 percent greater than the entire land area of the United States. The resource potential of the vast mineral deposits that occur within the U.S. EEZ is unknown, despite field studies that have taken place during the past 25 years. Since about 1975, information on marine mineral deposits has been obtained by numerous research cruises to the Pacific Ocean by the U.S. Geological Survey (USGS), the U.S. National Oceanic and Atmospheric Administration (NOAA), equivalent government agencies in Germany, Canada, France, Russia, Japan, China, South Korea, Australia, and New Zealand, and by academic researchers from all of these nations. Although most of the cruises by other nations explored areas outside the U.S. EEZ, information gained from those studies can aid in the evaluation of the mineral potential in the U.S. EEZ. However, the global effort remains inadequate to allow for the quantitative evaluation of mineral resources contained within the EEZ of nations or within international regions of the oceans.

Circular

National earthquake information center strategic plan, 2019–23

Executive Summary Damaging earthquakes occur regularly around the world; since the turn of the 20th century, hundreds of earthquakes have caused significant loss of life and (or) millions of dollars or more in economic losses. While most of these did not directly affect the United States and its Territories, by studying worldwide seismicity we can better understand how to mitigate the effects of earthquakes when they do occur within U.S. borders. Within the U.S. Government, this mandate falls on the U.S. Geological Survey (USGS) National Earthquake Information Center (NEIC), which has the statutory responsibility for monitoring and reporting on earthquakes domestically and globally. The NEIC has been operating since 1966, and throughout its history has been recognized as a world leader for earthquake information. For much of this time, NEIC has been cooperating with a number of regional seismic networks (RSNs) which operate in areas of heightened seismicity in the United States. In 2000, the Advanced National Seismic System (ANSS) was founded as a cooperative umbrella for earthquake-related data collection, analysis, and dissemination in the United States, thereby promoting advanced interoperability between the NEIC and RSN partners. The NEIC also cooperates and coordinates with dozens of global seismic networks. At present (2019), NEIC acquires real-time waveform data from more than 2,000 seismic stations worldwide, contributed from more than 130 seismic networks. Since 2006, the NEIC has operated on a 24-hour, 7-days per week (24/7) basis, and reports on about 30,000 earthquakes per year. Soon after the occurrence of a significant global earthquake, notifications are issued to government representatives, aid agencies, the press, and members of the general public by the Earthquake Notification Service (ENS), electronic feeds, and through the USGS Earthquake Hazards Program (EHP) website. Event-specific web pages provide detailed source parameter information outlining the location and magnitude of the earthquake, including more detailed source characteristics like moment magnitude and focal mechanisms and finite fault solutions. Further, NEIC produces a suite of real-time situational awareness products, including ShakeMap, ShakeCast, Did-You-Feel-It? (DYFI?), and Prompt Assessment of Global Earthquakes for Response (PAGER), to characterize the shaking resulting from the earthquake and the impact it is likely to have on nearby populations and infrastructure. All of these products are ultimately archived in the ANSS Comprehensive Catalog (ComCat), hosted and served by the NEIC. The NEIC also pursues an active research program to improve its ability to characterize earthquakes and understand their hazards. These efforts are all aimed at mitigating the risks of earthquakes to humankind. To maintain its prominent position in earthquake monitoring, the NEIC must continue to evolve, concurrently improving its operations and 24/7 robustness, streamlining services and infrastructure, and keeping pace with research and innovation in the field of seismology. This document outlines how the NEIC might best achieve such goals, by describing specific avenues and opportunities for development in the next five years (2019–23). Several key areas of operational and research focus are identified in this plan as being of the highest importance. First, NEIC must finalize improvements to its regional monitoring capabilities, including the implementation of a variety of improved earthquake detection and association algorithms. One of the most exciting avenues of recent research expansion in earthquake monitoring has involved the use of machine learning; NEIC must explore the benefits of machine learning for improved earthquake detection and source characterization. NEIC also needs to address issues related to the timeliness of earthquake information, exploring the benefits of distributing information as it becomes available, rather than when certain quality criteria are met. To that end, the incorporation of real-time Global Positioning System (GPS) data into the NEIC operational workflow will help improve the speed and accuracy of information for moderate-to-large earthquakes. Finally, NEIC should explore how to further expand and improve the quality and content of the products served during earthquake response efforts, including the generation of new earthquake sequence-specific products, adding an evolutionary component to earthquake information, and continued improvements to earthquake impact products.

Circular

Preliminary results of spectral induced polarization measurements, Wadi Bidah District, Kingdom of Saudi Arabia

Laboratory spectral induced polarization (SIP) measurements on 29 carbonaceous schist samples from the Wadi Bidah district show that most are associated with very long polarization decays or, equivalently, large time constants. In contrast, measurements on two massive sulfide samples indicate shorter polarization decays or smaller time constants. This difference in time constants for the polarization process results in two differences in the phase spectra in the frequency range of from 0.06 to 1Hz. First, phase values of carbonaceous rocks generally decrease as a function of increasing frequency. Second, phase values of massive sulfide-bearing rocks increase as a function of increasing frequency. These results from laboratory measurements agree well with those from other reported SIP measurements on graphites and massive sulfides from the Canadian Shield. Four SIP lines, measured by using a 50-m dipole-dipole array, were surveyed at the Rabathan 4 prospect to test how well the results of laboratory sample measurements can be applied to larger scale field measurements. Along one line, located entirely over carbonaceous schists, the phase values decreased as a function of increasing frequency. Along a second line, located over both massive sulfides and carbonaceous schists as defined by drilling, the phase values measured over carbonaceous schists decreased as a function of increasing frequency, whereas those measured over massive sulfides increased. In addition, parts of two lines were surveyed down the axes of the massive sulfide and carbonaceous units. The phase values along these lines showed similar differences between the carbonaceous schists and massive sulfides. To date, the SIP survey and the SIP laboratory measurements have produced the only geophysical data that indicate an electrical difference between the massive sulfide-bearing rocks and the surrounding carbonaceous rocks in the Wadi Bidah district. However, additional sample and field measurements in areas of known mineralization would fully evaluate the SIP method as applied to various geologic environments and styles of massive sulfide mineralization. Additionally, the efficiency of SIP surveys in delineating areas of sulfide mineralization might be improved by surveying lines down the axes of known electrical conductors. An evaluation of the applied research done on the SIP method to date suggests that this technique offers significant exploration applications to massive sulfide exploration in the Kingdom of Saudi Arabia.

Open-File Report

Development of high-throughput genomic resources to inform white-tailed deer population and disease management

White-tailed deer ( Odocoileus virginianus ) are the most abundant and widespread cervid in North America. Genetic data are used as a tool to monitor populations and make management decisions for this game species. However, the development and use of genomic tools that can generate a set of markers suitable for longitudinal genomic data collection, whether for management purposes or to study the demographic and evolutionary processes of widely distributed species, have been challenging. This is mainly due to the cost required to fully implement and interpret the data produced. Here, we generated whole genome resequencing data for 44 free-ranging deer from three regions in their central and eastern North American range and identified over 89 million single nucleotide polymorphisms (SNPs). We used a subset of these SNPs to develop two nested SNP tools, a high-density array (702,183 SNPs) and a medium-density array (72,723 SNPs) to support deer and chronic wasting disease (CWD) management and research. SNPs were selected to ensure an even distribution across scaffolds of the reference genome and include SNPs associated with CWD susceptibility. Using genotyping results for 469 deer from 15 states in the US and Mexico generated by the high-density array and 1335 deer from 18 states generated by the medium-density array, we assessed genotyping success across different populations and explored some insights into population structure. These genomic tools offer a standard set of markers that will enable researchers and managers to address important questions related to white-tailed deer and CWD management. Our SNP arrays also offer the opportunity to examine aspects of white-tailed deer ecology and evolutionary history that were previously difficult to address.

Molecular Ecology Resources

Late-kinematic timing of orogenic gold deposits and significance for computer-based exploration techniques with emphasis on the Yilgarn Block, Western Australia

Orogenic gold deposits are a widespread coherent group of epigenetic ore deposits that are sited in accretionary or collisional orogens. They formed over a large crustal-depth range from deep-seated low-salinity H 2 O–CO 2 ±CH 4 ±N 2 ore fluids and with Au transported as thio-complexes. Regional structures provide the main control on deposit distribution. In many terranes, first-order faults or shear zones appear to have controlled regional fluid flow, with greatest ore-fluid fluxes in, and adjacent to, lower-order faults, shear zones and/or large folds. Highly competent and/or chemically reactive rocks are the most common hosts to the larger deposits. Focusing of supralithostatic ore fluids into dilatant zones appears to occur late during the evolutionary history of the host terranes, normally within D 3 or D 4 in a D 1 –D 4 deformation sequence. Reactivation of suitably oriented pre-existing structures during a change in far-field stress orientation is a factor common to many deposits, and repeated reactivation may account for multiple mineralization episodes in some larger deposits. Absolute robust ages of mineralization support their late-kinematic timing, and, in general, suggest that deposits formed diachronously towards the end of the 100 to 200 m.y. long evolutionary history of hosting orogens. For example, in the Yilgarn Block, a region specifically emphasised in this study, orogenic gold deposits formed in the time interval between 40 and 90 m.y., with most about 60 to 70 m.y., after the youngest widespread basic-ultrabasic volcanism and towards the end of felsic magmatism. The late timing of orogenic gold deposits is pivotal to geologically-based exploration methodologies. This is because the present structural geometries of: (i) the deposits, (ii) the hosting goldfields, and (iii) the enclosing terranes are all essentially similar to those during gold mineralization, at least in their relative position to each other. Thus, interpretation of geological maps and cross-sections and three-dimensional models can be used to accurately simulate the physical conditions that existed at the time of ore deposition. It is particularly significant that the deposits are commonly related to repetitive and predictable geometries, such as structural heterogeneities within or adjacent to first-order structures, around rigid granitoid bodies, or in specific “locked-up” fold-thrust structures. Importantly, the two giant greenstone-hosted goldfields, Kalgoorlie and Timmins, show a remarkably similar geometry at the regional scale. Computer-based stress mapping and GIS-based prospectivity mapping are two computer-based quantitative methodologies that can utilize and take advantage of the late timing aspect of this deposit type to provide important geological aids in exploration, both in broad regions and more localized goldfields. Both require an accurate and consistent solid geology map, stress mapping requires knowledge of the far-field stresses during mineralization, and the empirical prospectivity mapping requires data from a significant number of known deposits in the terrane. The Kalgoorlie Terrane, in the Yilgarn Block, meets these criteria, and illustrates the potential of these methodologies in the exploration for orogenic gold deposits. Low minimum stress anomalies, interpreted to represent dilational zones during gold-related deformation, coincide well with the positions of known goldfields rather than individual gold deposits in the terrane, and there are additional as-yet unexplained anomalies. The prospectivity analysis confirms that predictable and repetitive factors controlling the siting of deposits are: (i) proximity to, and orientation and curvature of, granitoid-greenstone contacts, (ii) proximity to segments of crustal faults which strike in a preferred direction, (iii) proximity to specific lithological contacts which have similar preferred strike, (iv) proximity to anticlinal structures, and (v) the presence of preferred reactive host rocks (e.g., dolerite). The prospectivity map defines a series of anomalous areas, which broadly conform to those of the stress map (>78% correspondence). The most prospective category on this map covers less than 0.3% of the greenstone belts and yet hosts 16% of the known deposits, which have produced>80% of known gold. Thus, it discriminates in favour of the larger economically more-attractive deposits in the terrane. The successful application of stress mapping and prospectivity mapping to geology-based exploration for orogenic gold deposits indicates that more quantitative analysis of geological map data is a profitable line of research. The computer-based nature of these methodologies is ideal for the production of an ultimate, integrated, deposit target map, which can be compared to other, more conventional, targeting parameters such as geophysical and geochemical anomalies. Such an integrated strategy appears the way forward in the increasingly difficult task of cost-effective global exploration for orogenic gold deposits in poorly exposed terranes.

Western Australia

Ecosystem approach to inland fisheries: Research needs and implementation strategies

Inland fisheries are a vital component in the livelihoods and food security of people throughout the world, as well as contributing huge recreational and economic benefits. These valuable assets are jeopardized by lack of research-based understanding of the impacts of fisheries on inland ecosystems, and similarly the impact of human activities associated with inland waters on fisheries and aquatic biodiversity. To explore this topic, an international workshop was organized in order to examine strategies to incorporate fisheries into ecosystem approaches for management of inland waters. To achieve this goal, a new research agenda is needed that focuses on: quantifying the ecosystem services provided by fresh waters; quantifying the economic, social and nutritional benefits of inland fisheries; improving assessments designed to evaluate fisheries exploitation potential; and examining feedbacks between fisheries, ecosystem productivity and aquatic biodiversity. Accomplishing these objectives will require merging natural and social science approaches to address coupled social-ecological system dynamics. ?? 2010 The Royal Society.

Conference Paper