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USGS2019

Appalachian Basin stratigraphy, tectonics, and eustasy from the Blue Ridge to the Allegheny Front, Virginia and West Virginia

This guide is from a two-day field trip in western Virginia and eastern West Virginia held before the 2015 Geological Society of America annual meeting in Baltimore, Maryland. The field trip examines exposures of Paleozoic sedimentary strata in the Appalachian Basin starting in the Blue Ridge physiographic province, going through the Valley and Ridge physiographic province, and ending in the Appalachian Plateau physiographic province. Most of the field-trip stops are along US 48 (Corridor H) in West Virginia.

Virginia, West Virginia↗

USGS2018

2D and 3D potential field mapping and modelling at the Fallon FORGE site, Nevada, USA

Accurate geological characterization of Fallon FORGE is important for preparing the site as an EGS laboratory. As part of this effort, a 3D geologic map was constructed previously from well logs, surface geologic mapping, 2D seismic profiles, interpreted gravity & magnetic maps, and a gravity-inferred basement surface. In this study, we have conducted both 2D and 3D modelling of high-resolution gravity and magnetic data (pre-existing and new) in an effort to further refine and test this 3D geologic map at Fallon. This effort enabled a direct comparison of the 2D and 3D model results. Potential field modelling was guided by rock-property measurements of samples from drill-core and outcrop from the Fallon area. In total, five 2D potential field model profiles, up to 30 km in length, were constructed that extend across the Fallon area. The 3D gravity model volume was 8 km (N-S) x 8 km (E-W) x 4 km (thick). The majority of the 3D gravity model volume had 100 m cubic cells; but cells near the land surface were 1 m thick to adequately capture topography. Overall, the 2D & 3D geophysical modelling largely confirmed the previously constructed 3D geologic map at Fallon for three reasons: 1) lithologic boundaries in the 2D & 3D density models mostly agree with those in the 3D geologic map, 2) the rock properties used in the models lie within the range of independent measurements made on representative rock samples from the region, and 3) the match between the observed and calculated anomalies are largely within the measurement error of the observed fields. In places where the geophysical and geologic models differ, geophysical model results have revealed subsurface structural features that have helped refine geologic interpretations which, in turn, lead to adjustments to the 3D geologic map. In this paper, we present the 2D & 3D geophysical model results and discuss how they were utilized to confirm and refine our 3D geologic understanding of the Fallon FORGE site.

Geothermal Resources Council Transactions↗

USGS1988

Map of fault scarps formed in unconsolidated sediments, Tooele 1 degree by 2 degrees quadrangle, northwestern Utah

This report is one of a series of studies of western Utah (Anderson and Bucknam, 1979; Bucknam and Anderson, 1979b), eastern Nevada (Barnhard, 1985), and central Nevada (Wallace, 1979) that shows the distribution, relative age, and amount and extent of surface rupture on Quaternary fault scarps. Previous paleoseismicity studies in the Tooele 1°x2° quadrangle include reports by Gilbert (1928), Bucknam (1977), Anderson and Miller (1980), Bucknam and others (1980), and Everitt and Kaliser (1980). Geologic and geophysical data pertinent to paleoseismicity of the Tooele 1°x2° quadrangle can be found in reports by Mikulich and Smith (1974), Cook and others (1980), Smith and Bruhn (1984), and Arabasz and others (1987). The present study is a continuation of mapping fault scarps in 1°x2° quadrangles in the Basin and Range province; the purpose is to determine the youngest surface-faulting age and distribution of fault scarps for earthquake-hazards analysis. The accompanying map shows 10 areas containing late Quaternary fault scarps formed on unconsolidated sediments in the Tooele 1°x2° quadrangle, northwestern Utah. The faulted sediments include sandy, pebbly, to bouldery colluvium, alluvium, and lacustrine deposits. They are inferred to have been deposited in Quaternary time during the latest phase of basin-filling sedimentation. Because the map shows only scarps on unconsolidated sediments, it does not show all faults that could produce earthquakes. A comprehensive map of all Quaternary faults would also include those in bedrock and at the contact of bedrock and alluvium, as well as Quaternary faults that appear only as lineaments in surficial deposits. Initial study involved photointerpretation of high-quality 1:60,000-scale black and white aerial photographs of the map area; offsets as small as 1 m could be detected from these photos if the faults cut planar surfaces of considerable extent. A map of suspected fault scarps, identified from the photointerpretation, was compiled at a scale of 1:250,000 and served as a guide for subsequent field studies in conjunction with a similar map from Bucknam (1977). We have chosen not to connect discontinuous segments of aligned fault scarps unless there is compelling evidence of continuous surface rupture. Field studies consisted of (1) confirming scarps as fault related and deleting from the preliminary map those features that were not fault related or that had no surface offset (lineaments), (2) searching for stratigraphic indicators of amount and age of offset, and (3) measuring surface profiles according to procedures described in Bucknam and Anderson (1979a). We profiled selected fault scarps where they were sufficiently continuous and unmodified by fluvial deposition or erosion. In the early morning or late afternoon when the sun was at 1ow angles, additional field searches were made for scarps resulting from ground ruptures that had not been identified during the photo interpretation phase of the study. No additional scarps were found. Techniques that yield the relative age of fault scarps can be used as a guide to the frequency and location of relatively large earthquakes. For large regions, geologically determined rates of seismic activity in the Basin and Range province are generally in good agreement with rates determined from historic seismicity (Bucknam and Algermissen, 1984). Fault-scarp studies such as this have been used as a guide in locating boundaries of seismic source zones used in probabilistic earthquake hazard estimates of the Basin and Range province (Thenhaus and Wentworth, 1982; Bucknam and Thenhaus, 1983). We will first discuss the geologic setting of the map area and attributes of fault-scarp morphology, and then discuss the individual fault zones.

Utah↗

USGS2021

Aquatic ecosystem metabolism as a tool in environmental management

Recent advances in high-frequency environmental sensing and statistical approaches have greatly expanded the breadth of knowledge regarding aquatic ecosystem metabolism - the measurement and interpretation of gross primary productivity (GPP) and ecosystem respiration (ER). Aquatic scientists are poised to take advantage of widely available datasets and freely-available modeling tools to apply functional information gained through ecosystem metabolism to better environmental management. Historically, several logistical and conceptual factors have limited the widespread application of metabolism in management settings. Benefitting from new instrumental and modeling tools, it is now relatively straightforward to extend routine monitoring of dissolved oxygen (DO) to dynamic measures of aquatic ecosystem function (GPP & ER) and key physical processes such as gas exchange with the atmosphere (G). We review the current approaches for using DO data in environmental management with a focus on the United States, but briefly describe management frameworks in Europe and Canada. We highlight new applications of diel DO data and metabolism in regulatory settings and explore how they can be applied to managing and monitoring ecosystems. We then review existing data types and provide a short guide for implementing field measurements and modeling of ecosystem metabolic processes using currently available tools. Finally, we discuss research needed to overcome current conceptual limitations of applying metabolism in management settings. Despite challenges associated with modeling metabolism in rivers and lakes, rapid developments in this field have moved us closer to utilizing real-time estimates of GPP, ER and G to improve the assessment and management of environmental change.

WIREs Water↗

USGS2014

A numerical study of vegetation impact on reducing storm surge by wetlands in a semi-enclosed estuary

Coastal wetlands play a unique role in extreme hurricane events. The impact of wetlands on storm surge depends on multiple factors including vegetation, landscape, and storm characteristics. The Delft3D model, in which vegetation effects on flow and turbulence are explicitly incorporated, was applied to the semi-enclosed Breton Sound (BS) estuary in coastal Louisiana to investigate the wetland impact. Guided by extensive field observations, a series of numerical experiments were conducted based on variations of actual vegetation properties and storm parameters from Hurricane Isaac in 2012. Both the vegetation-induced maximum surge reduction (MSR) and maximum surge reduction rate (MSRR) increased with stem height and stem density, and were more sensitive to stem height. The MSR and MSRR decreased significantly with increasing wind intensity. The MSRR was the highest with a fast-moving weak storm. It was also found that the MSRR varied proportionally to the expression involving the maximum bulk velocity and surge over the area of interest, and was more dependent on the maximum bulk surge. Both MSR and MSRR appeared to increase when the area of interest decreased from the whole BS estuary to the upper estuary. Within the range of the numerical experiments, the maximum simulated MSR and MSRR over the upper estuary were 0.7 m and 37%, respectively.

Louisiana↗

USGS2003

Methods for using groundwater model predictions to guide hydrogeologic data collection, with application to the Death Valley regional groundwater flow system

Calibrated models of groundwater systems can provide substantial information for guiding data collection. This work considers using such models to guide hydrogeologic data collection for improving model predictions by identifying model parameters that are most important to the predictions. Identification of these important parameters can help guide collection of field data about parameter values and associated flow system features and can lead to improved predictions. Methods for identifying parameters important to predictions include prediction scaled sensitivities (PSS), which account for uncertainty on individual parameters as well as prediction sensitivity to parameters, and a new “value of improved information” (VOII) method presented here, which includes the effects of parameter correlation in addition to individual parameter uncertainty and prediction sensitivity. In this work, the PSS and VOII methods are demonstrated and evaluated using a model of the Death Valley regional groundwater flow system. The predictions of interest are advective transport paths originating at sites of past underground nuclear testing. Results show that for two paths evaluated the most important parameters include a subset of five or six of the 23 defined model parameters. Some of the parameters identified as most important are associated with flow system attributes that do not lie in the immediate vicinity of the paths. Results also indicate that the PSS and VOII methods can identify different important parameters. Because the methods emphasize somewhat different criteria for parameter importance, it is suggested that parameters identified by both methods be carefully considered in subsequent data collection efforts aimed at improving model predictions.

California, Nevada↗

USGS2020

A Lagrangian particle-tracking approach to modelling larval drift in rivers

The migration of larval fish from spawning to rearing habitat in rivers is not well understood. This paper describes a methodology to predict larval drift using a Lagrangian particle-tracking (LPT) model with passive and active behavioural components loosely coupled to a quasi-three-dimensional hydraulic model. In the absence of measured larval drift, a heuristic approach is presented for the larval drift of two species of interest, white sturgeon ( Acipenser transmontanus ) and burbot ( Lota lota ), in the Kootenai River, Idaho. Previous studies found that many fish species prefer certain vertical zones within the water column; sturgeon tend to be found near the bottom and burbot close to the water surface. Limiting the vertical movement of larvae is incorporated into the active component of the LPT model. The results illustrate a pattern of drift where secondary flow in meander bends and other zones of flow curvature redistributes particles toward the outside of the bend for surface drifters and toward the inside of the bend for bottom drifters. This pattern periodically reinforces the intersection of drifting larvae with channel margins in meander bends. In the absence of measured larval drift data, the model provides a tool for hypothesis testing and a guide to both field and laboratory experiments to further define the role of active behaviour in drifting larvae.

Idaho↗

USGS2014

The response of stream periphyton to Pacific salmon: using a model to understand the role of environmental context

1. In stream ecosystems, Pacific salmon deliver subsidies of marine-derived nutrients and disturb the stream bed during spawning. The net effect of this nutrient subsidy and physical disturbance on biological communities can be hard to predict and is likely to be mediated by environmental conditions. For periphyton, empirical studies have revealed that the magnitude and direction of the response to salmon varies from one location to the next. Salmon appear to increase periphyton biomass and/or production in some contexts (a positive response), but decrease them in others (a negative response). 2. To reconcile these seemingly conflicting results, we constructed a system dynamics model that links periphyton biomass and production to salmon spawning. We used this model to explore how environmental conditions influence the periphyton response to salmon. 3. Our simulations suggest that the periphyton response to salmon is strongly mediated by both background nutrient concentrations and the proportion of the stream bed suitable for spawning. Positive periphyton responses occurred when both background nutrient concentrations were low (nutrient limiting conditions) and when little of the stream bed was suitable for spawning (because the substratum is too coarse). In contrast, negative responses occurred when nutrient concentrations were higher or a larger proportion of the bed was suitable for spawning. 4. Although periphyton biomass generally remained above or below background conditions for several months following spawning, periphyton production returned quickly to background values shortly afterwards. As a result, based upon our simulations, salmon did not greatly increase or decrease overall annual periphyton production. This suggests that any increase in production by fish or invertebrates in response to returning salmon is more likely to occur via direct consumption of salmon carcasses and/or eggs, rather than the indirect effects of greater periphyton production. 5. Overall, our simulations suggest that environmental factors need to be taken into account when considering the effects of spawning salmon on aquatic ecosystems. Our model offers researchers a framework for testing periphyton response to salmon across a range of conditions, which can be used to generate hypotheses, plan field experiments and guide data collection.

Freshwater Biology↗

USGS1901

Report on the geology of the Philippine Islands

An attempt will be made in the following paper to bring together, so far as is practicable, all that is known of the geology of the Philippine Islands. The report is intended as a vade mecum for geologists in the field and a guide to the literature in the office. Doubtless something has escaped which should have been included, especially among the shrewd remarks of early Spanish travelers, but research in that direction is curious rather than profitable. If here and there they caught a glimpse of truth, with which it would be pleasant to credit them, most of their views on geological matters were of a grotesque falsity, with which it would be unkind to reproach them.

Annual Report↗

USGS2006

Modeling habitat distribution from organism occurrences and environmental data: Case study using anemonefishes and their sea anemone hosts

We demonstrate the KGSMapper (Kansas Geological Survey Mapper), a straightforward, web-based biogeographic tool that uses environmental conditions of places where members of a taxon are known to occur to find other places containing suitable habitat for them. Using occurrence data for anemonefishes or their host sea anemones, and data for environmental parameters, we generated maps of suitable habitat for the organisms. The fact that the fishes are obligate symbionts of the anemones allowed us to validate the KGSMapper output: we were able to compare the inferred occurrence of the organism to that of the actual occurrence of its symbiont. Characterizing suitable habitat for these organisms in the Indo-West Pacific, the region where they naturally occur, can be used to guide conservation efforts, field work, etc.; defining suitable habitat for them in the Atlantic and eastern Pacific is relevant to identifying areas vulnerable to biological invasions. We advocate distinguishing between these 2 sorts of model output, terming the former maps of realized habitat and the latter maps of potential habitat. Creation of a niche model requires adding biotic data to the environmental data used for habitat maps: we included data on fish occurrences to infer anemone distribution and vice versa. Altering the selection of environmental variables allowed us to investigate which variables may exert the most influence on organism distribution. Adding variables does not necessarily improve precision of the model output. KGSMapper output distinguishes areas that fall within 1 standard deviation (SD) of the mean environmental variable values for places where members of the taxon occur, within 2 SD, and within the entire range of values; eliminating outliers or data known to be imprecise or inaccurate improved output precision mainly in the 2 SD range and beyond. Thus, KGSMapper is robust in the face of questionable data, offering the user a way to recognize and clean such data. It also functions well with sparse datasets. These features make it useful for biogeographic meta-analyses with the diverse, distributed datasets that are typical for marine organisms lacking direct commercial value. ?? Inter-Research 2006.

Marine Ecology Progress Series↗

USGS2017

A computational fluid dynamics modeling study of guide walls for downstream fish passage

A partial-depth, impermeable guidance structure (or guide wall) for downstream fish passage is typically constructed as a series of panels attached to a floating boom and anchored across a water body (e.g. river channel, reservoir, or power canal). The downstream terminus of the wall is generally located nearby to a fish bypass structure. If guidance is successful, the fish will avoid entrainment in a dangerous intake structure (i.e. turbine intakes) while passing from the headpond to the tailwater of a hydroelectric facility through a safer passage route (i.e. the bypass). The goal of this study is to determine the combination of guide wall design parameters that will most likely increase the chance of surface-oriented fish being successfully guided to the bypass. To evaluate the flow field immediately upstream of a guide wall, a parameterized computational fluid dynamics model of an idealized power canal was constructed in © ANSYS Fluent v 14.5 (ANSYS Inc., 2012). The design parameters investigated were the angle and depth of the guide wall and the average approach velocity in the power canal. Results call attention to the importance of the downward to sweeping flow ratio and demonstrate how a change in guide wall depth and angle can affect this important hydraulic cue to out-migrating fish. The key findings indicate that a guide wall set at a small angle (15° is the minimum in this study) and deep enough such that sweeping flow dominant conditions prevail within the expected vertical distribution of fish approaching the structure will produce hydraulic conditions that are more likely to result in effective passage.

Ecological Engineering↗

USGS2013

Guiding out-migrating juvenile sea lamprey (Petromyzon marinus) with pulsed direct current

Non‐physical stimuli can deter or guide fish without affecting water flow or navigation and therefore have been investigated to improve fish passage at anthropogenic barriers and to control movement of invasive fish. Upstream fish migration can be blocked or guided without physical structure by electrifying the water, but directional downstream fish guidance with electricity has received little attention. We tested two non‐uniform pulsed direct current electric systems, each having different electrode orientations (vertical versus horizontal), to determine their ability to guide out‐migrating juvenile sea lamprey ( Petromyzon marinus ) and rainbow trout ( Oncorhynchus mykiss ). Both systems guided significantly more juvenile sea lamprey to a specific location in our experimental raceway when activated than when deactivated, but guidance efficiency decreased at the highest water velocities tested. At the electric field setting that effectively guided sea lamprey, rainbow trout were guided by the vertical electrode system, but most were blocked by the horizontal electrode system. Additional research should characterize the response of other species to non‐uniform fields of pulsed DC and develop electrode configurations that guide fish over a range of water velocity. Published 2013. This article is a U.S. Government work and is in the public domain in the USA.

River Research and Applications↗

USGS2025

A framework tool that applies weight-of-evidence integration to the analysis of existing datasets to guide freshwater conservation

The overarching issue we address here is how to extract clear and actionable ecological and management insights from real-world field data that often do not satisfy traditional statistical assumptions. Toward this goal, we developed a general 12+6 step adaptive management framework tool. We applied this framework tool to existing biodiversity monitoring data to create a proof-of-concept result that addresses the overarching question of “ why might a specific native stream fish taxon be present or absent at specific locations? ” Our multi-step framework tool links established steps and steps that are unique to our framework through weight-of evidence (WOE) integration, an approach that combines quantitative results from multiple visualization and statistical procedures. The systematic use of all steps in our framework can provide improved conservation outcomes compared to a single analysis. Advantages accrue from our approach because our framework tool refines the overarching goal into related sub-questions, applies a specific quantitative procedure to each sub-step, combines results from all sub-questions using a WOE integration, identifies testable questions that elucidate ambiguities and gaps revealed through WOE integration, and proposes practical field methods for obtaining this clarifying information through future research and data collections. The process of considering multiple visualizations and analyses as individual pieces of a shared puzzle offers a new way to approach the use of existing data. Our team-based approach transforms the collection and analysis of existing data into a series of field tests that can guide future actions (e.g., data collection-analysis events, restoration initiatives, research). Habitat and impact regressors will vary with taxa and system, but our structured process tool has broad generality for a range of conservation issues in which freshwater systems are threatened by human impacts.

Kansas↗

USGS1983

Users guide for the Water Resources Division bibliographic retrieval and report generation system

The WRDBIB Retrieval and Report-generation system has been developed by applying Multitrieve (CSD 1980, Reston) software to bibliographic data files. The WRDBIB data base includes some 9 ,000 records containing bibliographic citations and descriptors of WRD reports released for publication during 1968-1982. The data base is resident in the Reston Multics computer and may be accessed by registered Multics users in the field. The WRDBIB Users Guide provides detailed procedures on how to run retrieval programs using WRDBIB library files, and how to prepare custom bibliographic reports and author indexes. Users may search the WRDBIB data base on the following variable fields as described in the Data Dictionary: Authors, organizational source, title, citation, publication year, descriptors, and the WRSIC (accession) number. The Users Guide provides ample examples of program runs illustrating various retrieval and report generation aspects. Appendices include Multics access and file manipulation procedures; a ' Glossary of Selected Terms'; and a complete ' Retrieval Session ' with step-by-step outlines. (USGS)

Open-File Report↗

USGS2026

RoadxStr user’s guide—For collection of road-stream crossing assessment field observations

Intersections of drainage networks and road networks represent a critical nexus between natural waterways and human infrastructure. Managing these systems involves decisions related to management of infrastructure, hydrologic and geomorphic processes, and ecological connectivity. Interactions among these systems influence multiple values, including the intactness of transportation networks, public safety, water quality, and ecosystem function that collectively amount to billions of dollars. Despite the importance of road-stream crossings, there are countless gaps in knowing where and what they are. These gaps limit the degree to which managers can inventory and assess stream and road networks to inform decisions. To address this first-level need, we developed RoadxStr (road-stream crossings): a survey tool that effectively characterizes road-stream crossings across the full stream and drainage network. This document describes the RoadxStr Field Form, available within a mobile application, which is designed for rapid and standardized data collection involving assessment of a road-stream crossing, including the road, crossing structure(s), and the nearby hydrologic channel. This document provides instructions on how to (1) access and download the RoadxStr Field Form within the mobile application service and (2) use and complete a RoadxStr Field Form survey.

Techniques and Methods↗

USGS2006

The Everglades Depth Estimation Network (EDEN) for Support of Ecological and Biological Assessments

The Everglades Depth Estimation Network (EDEN) is an integrated network of real-time water-level monitoring, ground-elevation modeling, and water-surface modeling that provides scientists and managers with current (1999-present), online water-depth information for the entire freshwater portion of the Greater Everglades. Presented on a 400-square-meter grid spacing, EDEN offers a consistent and documented dataset that can be used by scientists and managers to (1) guide large-scale field operations, (2) integrate hydrologic and ecological responses, and (3) support biological and ecological assessments that measure ecosystem responses to the implementation of the Comprehensive Everglades Restoration Plan.

Fact Sheet↗

USGS2017

Everglades Depth Estimation Network (EDEN)—A decade of serving hydrologic information to scientists and resource managers

Introduction The Everglades Depth Estimation Network (EDEN) provides scientists and resource managers with regional maps of daily water levels and depths in the freshwater part of the Greater Everglades landscape. The EDEN domain includes all or parts of five Water Conservation Areas, Big Cypress National Preserve, Pennsuco Wetlands, and Everglades National Park. Daily water-level maps are interpolated from water-level data at monitoring gages, and depth is estimated by using a digital elevation model of the land surface. Online datasets provide time series of daily water levels at gages and rainfall and evapotranspiration data ( https://sofia.usgs.gov/eden/ ). These datasets are used by scientists and resource managers to guide large-scale field operations, describe hydrologic changes, and support biological and ecological assessments that measure ecosystem response to the implementation of the Comprehensive Everglades Restoration Plan. EDEN water-level data have been used in a variety of biological and ecological studies including (1) the health of American alligators as a function of water depth, (2) the variability of post-fire landscape dynamics in relation to water depth, (3) the habitat quality for wading birds with dynamic habitat selection, and (4) an evaluation of the habitat of the Cape Sable seaside sparrow.

Florida↗

USGS2006

Mapping vegetation communities in Ozark National Scenic Riverways: final technical report to the National Park Service

Vegetation communities were mapped at two levels in Ozark National Scenic Riverways (ONSR) usign a hybrid combination of statistical methods and photointerpretation. The primary map includes 49 cover classes, including 24 cleasses that relate to vegetation associations currenly described by the United States National Vegetation Classification Standard (USNVC: The Nature Conservancy, 1994a). The remaining types include cultural features, ruderal communities on abandoned agricultural lands, and non-vegetated classes. Overall map classification accuarcy is 63 percent. The secondary mapping level aggregates communities with similar appearance and ecologically related associations into Community Types. The resultant 33-class Community Type map has an overall classification accuracy of 77 percent and identified groups of communities based on resource management goals within the park. Important additional products include 1) a general probability map for all vegetation associations, which can be used to assess final classification certainty, and 2) individual probability maps for each association, which can be used to identify areas that have a high likelihood of supporting a given type, beyond where that type was identified in the final map products. Other secondary map products include data layers derived from primary color-infrared imagery, secondary imagery data and digital elevation models. A field key and photo guide to associations and complete community descriptions were produced, along with a photo guide of fuel conditions. Wildland fuels data were used to generate a fuels map based upon Anderson's fuels models (1982).

Missouri↗