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At least 235 records · Page 13Linked to original sources
USGS1981

Nuclear magnetic resonance studies of ancient buried wood-I. Observations on the origin of coal to the brown coal stage

Various wood fragments buried in sediments under anaerobic conditions for from 450 yr to approximately 8 Myr have been examined by solid-state 13C nuclear magnetic resonance. Cellulose and other carbohydrates, the major components of Holocene wood, have been shown to be gradually hydrolyzed or otherwise lost under the conditions of burial. Lignin structures, however, are preserved relatively unchanged and become concentrated by difference as the carbohydrates disappear. Thus, a fragment of coalified wood isolated from a Miocene brown coal was found to be still composed of approximately 75% lignin and 25% cellulose. On the basis of our observations, we suggest that coalification of woody tissue progresses directly from lignin to coal and that such coalification may be retarded until most of the cellulose disappears. ?? 1981.

Organic Geochemistry↗
USGS1987

Solid-state 13C NMR studies of dissolved organic matter in pore waters from different depositional environments

Dissolved organic matter (DOM) in pore waters from sediments of a number of different depositional environments was isolated by ultrafiltration using membranes with a nominal molecular weight cutoff of 500. This > 500 molecular weight DOM represents 70–98% of the total DOM in these pore waters. We determined the gross chemical structure of this material using both solid-state 13 C nuclear magnetic resonance spectroscopy and elemental analysis. Our results show that the DOM in these pore waters appears to exist as two major types: one type dominated by carbohydrates and paraffinic structures and the second dominated by paraffinic and aromatic structures. We suggest that the dominance of one or the other structural type of DOM in the pore water depends on the relative oxidizing/reducing nature of the sediments as well as the source of the detrital organic matter. Under dominantly anaerobic conditions carbohydrates in the sediments are degraded by bacteria and accumulate in the pore water as DOM. However, little or no degradation of lignin occurs under these conditions. In contrast, sediments thought to be predominantly aerobic in character have DOM with diminished carbohydrate and enhanced aromatic character. The aromatic structures in the DOM from these sediments are thought to arise from the degradation of lignin. The large amounts of paraffinic structures in both types of DOM may be due to the degradation of unidentified paraffinic materials in algal or bacterial remains.

Organic Geochemistry↗
USGS1993

Crude oil in a shallow sand and gravel aquifer-III. Biogeochemical reactions and mass balance modeling in anoxic groundwater

Crude oil floating on the water table in a sand and gravel aquifer provides a constant source of hydrocarbons to the groundwater at a site near Bemidji, Minnesota. The degradation of hydrocarbons affects the concentrations of oxidized and reduced aqueous species in the anoxic part of the contaminant plume that developed downgradient from the oil body. The concentrations of Fe 2+ , Mn 2+ and CH 4 , Eh measurements, and the δ 13 C ratios of the total inorganic C indicate that the plume became more reducing ver a 5-a period. However, the size of the contaminant plume remained stable during this time. Field data coupled with laboratory microcosm experiments indicate that benzene and the alkylbenzenes are degraded in an anoxic environment. In anaerobic microcosm experiments conducted under field conditions, almost complete degradation (98%) was observed for benzene in 125 d and for toluene in 45 d. Concentrations of aqueous Fe 2+ and Mn 2+ increased in these experiments, indicating that the primary reactions were hydrocarbon degradation coupled with Fe and Mn reduction. Mass transfer calculations on a 40-m flowpath in the anoxic zone, downgradient from the oil body, indicated that the primary reactions in the anoxic zone are oxidation of organic compounds, precipitation of siderite and a ferroan calcite, dissolution of iron oxide and outgassing of CH 4 and CO 2 . The major difference in the two models presented is the ratio of CO 2 and CH 4 that outgasses. Both models indicate quantitatively that large amounts of Fe are dissolved and reprecipitated as ferrous iron in the anoxic zone of the contaminant plume.

Minnesota↗
USGS2007

Evaluation of sulfate reduction at experimentally induced mixing interfaces using small-scale push-pull tests in an aquifer-wetland system

This paper presents small-scale push–pull tests designed to evaluate the kinetic controls on SO 4 2 - "> SO42- reduction in situ at mixing interfaces between a wetland and aquifer impacted by landfill leachate at the Norman Landfill research site, Norman, OK. Quantifying the rates of redox reactions initiated at interfaces is of great interest because interfaces have been shown to be zones of increased biogeochemical transformations and thus may play an important role in natural attenuation. To mimic the aquifer–wetland interface and evaluate reaction rates, SO 4 2 - "> SO42- -rich anaerobic aquifer water ( ∼ 100 mg / L SO 4 2 - ) "> (∼100mg/LSO42-) was introduced into SO 4 2 - "> SO42- -depleted wetland porewater via push–pull tests. Results showed SO 4 2 - "> SO42- reduction was stimulated by the mixing of these waters and first-order rate coefficients were comparable to those measured in other push–pull studies. However, rate data were complex involving either multiple first-order rate coefficients or a more complex rate order. In addition, a lag phase was observed prior to SO 4 2 - "> SO42- reduction that persisted until the mixing interface between test solution and native water was recovered, irrespective of temporal and spatial constraints. The lag phase was not eliminated by the addition of electron donor (acetate) to the injected test solution. Subsequent push–pull tests designed to elucidate the nature of the lag phase support the importance of the mixing interface in controlling terminal electron accepting processes. These data suggest redox reactions may occur rapidly at the mixing interface between injected and native waters but not in the injected bulk water mass. Under these circumstances, push–pull test data should be evaluated to ensure the apparent rate is actually a function of time and that complexities in rate data be considered.

Oklahoma↗
USGS2008

Relationships between microbial communities and environmental parameters at sites impacted by mining of volcanogenic massive sulfide deposits, Prince William Sound, Alaska

The relations among geochemical parameters and sediment microbial communities were examined at three shoreline sites in the Prince William Sound, Alaska, which display varying degrees of impact by acid-rock drainage (ARD) associated with historic mining of volcanogenic massive sulfide deposits. Microbial communities were examined using total fatty acid methyl esters (FAMEs), a class of compounds derived from lipids produced by eukaryotes and prokaryotes (bacteria and Archaea); standard extraction techniques detect FAMEs from both living (viable) and dead (non-viable) biomass, but do not detect Archaeal FAMEs. Biomass and diversity (as estimated by FAMEs) varied strongly as a function of position in the tidal zone, not by study site; subtidal muds, Fe oxyhydroxide undergoing biogenic reductive dissolution, and peat-rich intertidal sediment had the highest values. These estimates were lowest in acid-generating, intertidal zone sediment; if valid, the estimates suggest that only one or two bacterial species predominate in these communities, and/or that Archeal species are important members of the microbial community in this sediment. All samples were dominated by bacterial FAMEs (median value >90%). Samples with the highest absolute abundance of eukaryotic FAMEs were biogenic Fe oxyhydroxides from shallow freshwater pools (fungi) and subtidal muds (diatoms). Eukaryotic FAMEs were practically absent from low-pH, sulfide-rich intertidal zone sediments. The relative abundance of general microbial functional groups such as aerobes/anaerobes and gram(+)/gram(-) was not estimated due to severe inconsistency among the results obtained using several metrics reported in the literature. Principal component analyses (PCAs) were performed to investigate the relationship among samples as separate functions of water, sediment, and FAMEs data. PCAs based on water chemistry and FAMEs data resulted in similar relations among samples, whereas the PCA based on sediment chemistry produced a very different sample arrangement. Specifically, the sediment parameter PCA grouped samples with high bulk trace metal concentration regardless of whether the metals were incorporated into secondary precipitates or primary sulfides. The water chemistry PCA and FAMEs PCA appear to be less prone to this type of artifact. Signature lipids in sulfide-rich sediments could indicate the presence of acid-tolerant and/or acidophilic members of the genus Thiobacillus or they could indicate the presence of SO4-reducing bacteria. The microbial community documented in subtidal and offshore sediments is rich in SRB and/or facultative anaerobes of the Cytophaga-Flavobacterium group; both could reasonably be expected in PWS coastal environments. The results of this study provide evidence for substantial feedback between local (meter to centimeter-scale) geochemical variations, and sediment microbial community composition, and show that microbial community signatures in the intertidal zone are significantly altered at sites where ARD drainage is present relative to sites where it is not, even if the sediment geochemistry indicates net accumulation of ARD-generated trace metals in the intertidal zone. ?? 2007 Elsevier Ltd. All rights reserved.

Applied Geochemistry↗
USGS2008

Influence of sulfate input on freshwater sediments: Insights from incubation experiments

Incubation experiments were carried out under high and low SO42 - conditions to investigate the buffering capacity of lake sediments. Increased SO42 - content in the water column enhanced microbial SO42 - reduction, causing a continuous decrease of SO42 - content from 1086 to 83 mg/L paralleled by an increase of pH in the water column from 3.76 to 7.20. These changes were accompanied by decreased methanogenesis in the incubated sediments. The results demonstrate that the buffering capacity resulted from a variety of biodegradation pathways controlled to a large extent by SO42 - reduction, rather than by direct anaerobic oxidation of CH4. This is documented by distinctly lower ??13C values (from -73.99 to -65.24???) of the CH4 generated under higher SO42 - conditions compared to higher ??13C values (from -68.98 to -61.37???) of the CH4 generated under lower SO42 - conditions. ?? 2008 Elsevier Ltd. All rights reserved.

Applied Geochemistry↗
USGS2017

Microbially mediated barite dissolution in anoxic brines

Fluids injected into shale formations during hydraulic fracturing of black shale return with extraordinarily high total-dissolved-solids (TDS) and high concentrations of barium (Ba) and radium (Ra). Barite, BaSO 4 , has been implicated as a possible source of Ba as well as a problematic mineral scale that forms on internal well surfaces, often in close association with radiobarite, (Ba,Ra)SO 4 . The dissolution of barite by abiotic processes is well quantified. However, the identification of microbial communities in flowback and produced water necessitates the need to understand barite dissolution in the presence of bacteria. Therefore, we evaluated the rates and mechanisms of abiotic and microbially-mediated barite dissolution under anoxic and hypersaline conditions in the laboratory. Barite dissolution experiments were conducted with bacterial enrichment cultures established from produced water from Marcellus Shale wells located in northcentral Pennsylvania. These cultures were dominated by anaerobic halophilic bacteria from the genus Halanaerobium . Dissolved Ba was determined by ICP-OES and barite surfaces were investigated by SEM and AFM. Our results reveal that: 1) higher amounts of barium (up to ∼5 × ) are released from barite in the presence of Halanaerobium cultures compared to brine controls after 30 days of reaction, 2) etch pits that develop on the barite (001) surface in the presence of Halanaerobium exhibit a morphology that is distinct from those that form during control experiments without bacteria, 3) etch pits that develop in the presence of Halanaerobium exhibit a morphology that is similar to the morphology of etch pits formed in the presence of strong organic chelators, EDTA and DTPA, and 4) experiments using dialysis membranes to separate barite from bacteria suggest that direct contact between the two is not required in order to promote dissolution. These results suggest that Halanaerobium increase the rate of barite dissolution in anoxic and high ionic strength solutions. Additionally, the increase in rate occurs without direct microbe-mineral contact suggesting that metabolites secreted by the bacteria may be responsible for promotion of dissolution. The findings of this study have implications for understanding barium cycling in marine/hypersaline environments, release of barium (and associated radium) from waste solids generated from energy and mining industries, as well as potential for developing new anti-scaling chemicals.

Applied Geochemistry↗
USGS2017

Uranium delivery and uptake in a montane wetland, north-central Colorado, USA

Comprehensive sampling of peat, underlying lakebed sediments, and coexisting waters of a naturally uraniferous montane wetland are combined with hydrologic measurements to define the important controls on uranium (U) supply and uptake. The major source of U to the wetland is groundwater flowing through locally fractured and faulted granite gneiss of Proterozoic age. Dissolved U concentrations in four springs and one seep ranged from 20 to 83 ppb (μg/l). Maximum U concentrations are ∼300 ppm (mg/kg) in lakebed sediments and >3000 ppm in peat. Uranium in lakebed sediments is primarily stratabound in the more organic-rich layers, but samples of similar organic content display variable U concentrations. Post-depositional modifications include variable additions of U delivered by groundwater. Uranium distribution in peat is heterogeneous and primarily controlled by proximity to groundwater-fed springs and seeps that act as local point sources of U, and by proximity to groundwater directed along the peat/lakebeds contact. Uranium is initially sorbed on various organic components of peat as oxidized U(VI) present in groundwater. Selective extractions indicate that the majority of sorbed U remains as the oxidized species despite reducing conditions that should favor formation of U(IV). Possible explanations are kinetic hindrances related to strong complex formation between uranyl and humic substances, inhibition of anaerobic bacterial activity by low supply of dissolved iron and sulfate, and by cold temperatures.

Colorado↗
USGS2014

Aquatic CAM photosynthesis: a brief history of its discovery

Aquatic CAM (Crassulacean Acid Metabolism) photosynthesis was discovered while investigating an unrelated biochemical pathway concerned with anaerobic metabolism. George Bowes was a significant contributor to this project early in its infancy. Not only did he provide me with some valuable perspectives on peer review rejections, but by working with his gas exchange system I was able to take our initial observations of diel fluctuations in malic acid to the next level, showing this aquatic plant exhibited dark CO2 uptake. CAM is universal in all aquatic species of the worldwide Lycophyta genus Isoetes and non-existent in terrestrial Isoetes. Outside of this genus aquatic CAM has a limited occurrence in three other families, including the Crassulaceae. This discovery led to fascinating adventures in the highlands of the Peruvian Andes in search of Stylites, a terrestrial relative of Isoetes. Stylites is a plant that is hermetically sealed from the atmosphere and obtains all of its carbon from terrestrial sources and recycles carbon through CAM. Considering the Mesozoic origin of Isoetes in shallow pools, coupled with the fact that aquatic Isoetes universally possess CAM, suggests the earliest evolution of CAM photosynthesis was most likely not in terrestrial plants.

Aquatic Botany↗
USGS2009

Respiratory arsenate reductase as a bidirectional enzyme

The haloalkaliphilic bacterium Alkalilimnicola ehrlichii is capable of anaerobic chemolithoautotrophic growth by coupling the oxidation of arsenite (As(III)) to the reduction of nitrate and carbon dioxide. Analysis of its complete genome indicates that it lacks a conventional arsenite oxidase (Aox), but instead possesses two operons that each encode a putative respiratory arsenate reductase (Arr). Here we show that one homolog is expressed under chemolithoautotrophic conditions and exhibits both arsenite oxidase and arsenate reductase activity. We also demonstrate that Arr from two arsenate respiring bacteria, Alkaliphilus oremlandii and Shewanella sp. strain ANA-3, is also biochemically reversible. Thus Arr can function as a reductase or oxidase. Its physiological role in a specific organism, however, may depend on the electron potentials of the molybdenum center and [Fe–S] clusters, additional subunits, or constitution of the electron transfer chain. This versatility further underscores the ubiquity and antiquity of microbial arsenic metabolism.

Biochemical and Biophysical Research Communication↗
USGS2004

Using magnetic susceptibility to facilitate more rapid, reproducible and precise delineation of hydric soils in the midwestern USA

Standard field indicators, currently used for hydric soil delineations [USDA-NRCS, 1998. Field indicators of hydric soils in the United States, Version 4.0. In: G.W. Hurt et al. (Ed.), United States Department of Agriculture-NRCS, Fort Worth, TX], are useful, but in some cases, they can be subjective, difficult to recognize, or time consuming to assess. Magnetic susceptibility (MS) measurements, acquired rapidly in the field with a portable meter, have great potential to help soil scientists delineate and map areas of hydric soils more precisely and objectively. At five sites in Illinois (from 5 to 15 ha in area) with contrasting soil types and glacial histories, the MS values of surface soils were measured along transects, and afterwards mapped and contoured. The MS values were found to be consistently higher in well-drained soils and lower in hydric soils, reflecting anaerobic deterioration of both detrital magnetite and soil-formed ferrimagnetics. At each site, volumetric MS values were statistically compared to field indicators to determine a critical MS value for hydric soil delineation. Such critical values range between 22??10-5 and 33??10-5 SI in silty loessal or alluvial soils in Illinois, but are as high as 61??10-5 SI at a site with fine sandy soil. A higher magnetite content and slower dissolution rate in sandy soils may explain the difference. Among sites with silty parent material, the lowest critical value (22??10-5 SI) occurs in soil with low pH (4.5-5.5) since acidic conditions are less favorable to ferrimagnetic mineral neoformation and enhance magnetite dissolution. Because of their sensitivity to parent material properties and soil pH, critical MS values must be determined on a site specific basis. The MS of studied soil samples (0-5 cm depth) is mainly controlled by neoformed ultrafine ferrimagnetics and detrital magnetite concentrations, with a minor contribution from anthropogenic fly ash. Neoformed ferrimagnetics are present in all samples but, based on high ??FD% (???5% to 10%), are most prevalent in high pH Mollisols of northeastern Illinois. Scanning electron microscope images display significantly more detrital magnetite alteration in hydric soils, substantiating that reductive dissolution of magnetite (aided by microorganisms) is a primary cause for lower MS. Fly ash comprises 8-50% of the >5 ??m strongly magnetic particles and typically accounts for 5-15% of the total MS signal. The proportion of fly ash in >5 ??m strongly magnetic fractions is greater in hydric soils because of lower natural magnetite contents, possibly combined with historical topsoil accumulation in lower landscapes. Magnetic fly ash particles are also more altered in low MS soils, implying that significant magnetite dissolution can occur in less than 150 years. ?? 2004 Elsevier B.V. All rights reserved.

Catena↗
USGS2004

Inhibition and enhancement of microbial surface colonization: the role of silicate composition

Classical treatment of cell attachment by models of filtration or coulombic attraction assumes that attachment of cells to mineral surfaces would be controlled by factors such as response to predation, collision efficiency, or coulombic attraction between the charged groups at the mineral and cell surfaces. In the study reported here, the passive model of attachment was investigated using a native microbial consortium and a variety of Al- and Fe-bearing silicates and oxides to determine if other controls, such as mineral composition, also influence the interaction between cells and surfaces. Results from in situ colonization studies in an anaerobic groundwater at pH 6.8 combined with most probable number analyses (MPN) of surface-adherent cells demonstrate that electrostatic effects dominate microbial colonization on positively charged oxide surfaces regardless of mineral composition. In contrast, on negatively charged silicate minerals and glasses, the solid phase composition is a factor in determining the extent of microbial colonization, as well as the diversity of the attached community. In particular, silicates containing more than 1.2% Al exhibit less biomass than Al-poor silicates and MPN suggests a shift in community diversity, possibly indicating Al toxicity on these surfaces. When Fe is present in the silicate, however, this trend is reversed and abundant colonization of the surface is observed. Here, microorganisms preferentially colonize those silicate surfaces that offer beneficial nutrients and avoid those that contain potentially toxic elements.

Chemical Geology↗
USGS2017

Microbial methane from in situ biodegradation of coal and shale: A review and reevaluation of hydrogen and carbon isotope signatures

Stable carbon and hydrogen isotope signatures of methane, water, and inorganic carbon are widely utilized in natural gas systems for distinguishing microbial and thermogenic methane and for delineating methanogenic pathways (acetoclastic, hydrogenotrophic, and/or methylotrophic methanogenesis). Recent studies of coal and shale gas systems have characterized in situ microbial communities and provided stable isotope data (δD-CH 4 , δD-H 2 O, δ 13 C-CH 4 , and δ 13 C-CO 2 ) from a wider range of environments than available previously. Here we review the principal biogenic methane-yielding pathways in coal beds and shales and the isotope effects imparted on methane, document the uncertainties and inconsistencies in established isotopic fingerprinting techniques, and identify the knowledge gaps in understanding the subsurface processes that govern H and C isotope signatures of biogenic methane. We also compare established isotopic interpretations with recent microbial community characterization techniques, which reveal additional inconsistencies in the interpretation of microbial metabolic pathways in coal beds and shales. Collectively, the re-assessed data show that widely-utilized isotopic fingerprinting techniques neglect important complications in coal beds and shales. Isotopic fingerprinting techniques that combine δ 13 C-CH 4 with δD-CH 4 and/or δ 13 C-CO 2 have significant limitations: (1) The consistent ~ 160‰ offset between δD-H 2 O and δD-CH 4 could imply that hydrogenotrophic methanogenesis is the dominant metabolic pathway in microbial gas systems. However, hydrogen isotopes can equilibrate between methane precursors and coexisting water, yielding a similar apparent H isotope signal as hydrogenotrophic methanogenesis, regardless of the actual methane formation pathway. (2) Non-methanogenic processes such as sulfate reduction, Fe oxide reduction, inputs of thermogenic methane, anaerobic methane oxidation, and/or formation water interaction can cause the apparent carbon isotope fractionation between δ 13 C-CH 4 and δ 13 C-CO 2 (α 13 C CO2-CH4 ) to differ from the true methanogenic fractionation, complicating interpretation of methanogenic pathways. (3) Where little-fractionating non-methanogenic bacterial processes compete with highly-fractionating methanogenesis, the mass balance between CH 4 and CO 2 is affected. This has implications for δ 13 C values and provides an alternative interpretation for net C isotope signatures than solely the pathways used by active methanogens. (4) While most of the reviewed values of δD-H 2 O - δD-CH 4 and α 13 C CO2-CH4 are apparently consistent with hydrogenotrophic methanogenesis as the dominant pathway in coal beds and shales, recent microbial community characterization techniques suggest a possible role for acetoclastic or methylotrophic methanogenesis in some basins.

Chemical Geology↗
USGS2020

Molecular indicators of methane metabolisms at cold seeps along the United States Atlantic margin

A lipid biomarker study was undertaken to determine the microbial composition and variability in authigenic carbonates and associated soft bottom habitats from the Norfolk and the Baltimore Canyon seep fields along the US mid-Atlantic margin. Results from this study capture a distinct molecular signal from methane oxidizing archaea, including archaeol (I), sn-2-hydroxyarchaeol, pentamethylicosane (PMI), and crocetane. These consortia of methane-oxidizing Archaea have been identified as carrying out anaerobic oxidation of methane (AOM), thereby favoring the precipitation of methane derived authigneic carbonates. The carbon isotope (δ13C) values of AOM-related lipids were strongly depleted in 13C, (i.e., archaeol: -91.64 ‰, sn-2-hydroxyarchaeol: -129.18 ‰, pentamethylicosane (PMI); -131.36 ‰, and crocetane: -70.94 ‰), confirming the dominance of methane as the dominant carbon source for the Archaea during AOM fractionation. The presence of terminally branched fatty acids such as the antesio- and iso-C15:0 components, diagnostic of sulfate-reducing bacteria (SRB), and their depleted δ13C signature (-107.6 ‰), supports syntrophy of SRB with methane-oxidizing archaea. While lipid biomarker profiles of authigenic carbonates biomarker are similar to those found in the seep sediment, suggesting a similar microbial assemblage within the seep-microbiome, a range in lipid composition, distribution, and isotopic signature between seep sites and matrix type suggests AOM is performed by multiple archaeal sources, instead of a single archaeal species.

Atlantic margin↗
USGS2021

Contribution of deep-sourced carbon from hydrocarbon seeps to sedimentary organic carbon: Evidence from radiocarbon and stable isotope geochemistry

Sulfate-driven anaerobic oxidation of methane (AOM) limits the release of methane from marine sediments and promotes the formation of carbonates close to the seafloor in seepage areas along continental margins. It has been established that hydrocarbon seeps are a source of methane, dissolved inorganic carbon, and dissolved organic carbon to marine environments. However, questions remain about the contribution of deep-sourced carbon from hydrocarbon seeps to the sedimentary organic carbon pool. In this study, we analyzed carbon quantity, radiocarbon content (as percent modern carbon, pMC), stable carbon isotopic compositions (as δ 13 C) of organic matter enclosed within seep carbonates from the Gulf of Mexico and the South China Sea to assess if sediment organic matter may be used as a proxy for methane seepage intensity. The δ 13 C values of organic matter (δ 13 C org ) exhibited a large range from −81.4‰ to −23.9‰. Radiocarbon contents of the carbonate-bound organic matter in seep carbonates ranged from 6% to 28% pMC, suggesting organic matter of the carbonates is a mixture of marine particulate organic matter (δ 13 C = −22‰ VPDB and 90% modern carbon) and biomass resulting from methane oxidation (assumed to have 0% modern carbon). Assuming constant productivity in the marine photic zone, it is proposed that seepage intensity and duration are the most important factors controlling the contribution of methane-derived carbon to the sedimentary column. This study reinforces the potential for using δ 13 C values of organic carbon to discern methane-rich environments in ancient sedimentary environments where authigenic carbonate is not present and to constrain the record of AOM through Earth history.

Chemical Geology↗
USGS2021

Effect of an algal amendment on the microbial conversion of coal to methane at different sulfate concentrations from the Powder River Basin, USA

Biogenic methane is estimated to account for one-fifth of the natural gas worldwide and there is great interest in controlling methane from different sources. Biogenic coalbed methane (CBM) production relies on syntrophic associations between fermentative bacteria and methanogenic archaea to anaerobically degrade recalcitrant coal and produce methanogenic substrates. However, very little is known about how differences in geochemistry, hydrology, and microbial community composition influence subsurface carbon utilization and CBM production. The addition of an amendment consisting of microalgal biomass has previously been shown to increase CBM production while providing the possibility of a closed-loop fossil system where waste (production water) is used to grow algae to ultimately produce energy (methane). However, the efficiency of enhancing CBM production under different redox conditions remains unresolved. In this study, we focused on the U.S. Geological Survey's Birney test site (Montana, USA) that has nine wells vertically accessing four coal seams with varying geochemistry (low and high sulfate (SO 4 2− )) and methane production rates. We used organic matter (OM) in the form of algal biomass to discern the effect of this amendment on OM degradation and microbially enhanced CBM production potential under different geochemical constraints. We tracked changes in community composition, OM composition, organic carbon (OC) concentration, methane production, and nutrients in batch systems over six months. Methane production was detected only in microcosms from low SO 4 2− wells (168 to 800 μg methane per gram of coal). The OC consumption varied across time for all wells and the variation was greatest for the low SO 4 2− wells. Different groups of syntrophic bacteria were associated with net‑carbon consuming microcosms, and specifically Syntrophorhabdus was identified with several different statistical methods as a potentially important coal degrader. Results from this study provide insight into potential coal-degraders, the compositional changes in some of the different OM fractions, and trends in carbon consumption related to methane production across coal seams along the vertical SO 4 2− gradient.

Montana, Wyoming↗
USGS2019

Examination of Bathymodiolus childressi nutritional sources, isotopic niches, and food-web linkages at two seeps in the US Atlantic margin using stable isotope analysis and mixing models

Chemosynthetic environments support distinct benthic communities capable of utilizing reduced chemical compounds for nutrition. Hundreds of methane seeps have been documented along the U.S. Atlantic margin (USAM), and detailed investigations at a few seeps have revealed distinct environments containing mussels, microbial mats, authigenic carbonates, and soft sediments. The dominant mussel, Bathymodiolus childressi , contains methanotrophic endosymbionts but is also capable of filter feeding, and stable isotope analysis (SIA) of mussel-shell periostracum suggests that these mussels are mixotrophic, assimilating multiple food resources. However, it is unknown whether mixotrophy is widespread or varies spatially and temporally. We used SIA (δ 13 C, δ 15 N, and δ 34 S) and an isotope mixing model (MixSIAR) to estimate resource contribution to B. childressi and characterize food webs at two seep sites (Baltimore Seep; 400 m and Norfolk Seep; 1500 m depths) along the USAM, and applied a linear mixed-effects model to explore the role of mussel population density and tissue type in influencing SIA variance. After controlling for location and temporal variation, isotopic variability was a function of proportion of live mussels present and tissue type. Isotopic differences were also spatially discrete, possibly reflecting variations in the underlying carbon source at the two sites. Low mussel δ 13 C values (∼−63‰) are consistent with a dependence on microbial methane. However, MixSIAR results revealed mixotrophy for mussels at both sites, implying a reliance on a mixture of methane and phytoplankton-derived particulate organic material. The mixing model results also reveal population density-driven patterns, suggesting that resource use is a function of live mussel abundance. Mussel isotopes differed by tissue type, with gill having the lowest δ 15 N values relative to muscle and mantle tissues. Based on mass balance equations, up to 79% of the dissolved inorganic carbon (DIC) of the pore fluids within the anaerobic oxidation of the methane zone is derived from methane and available to fuel upper slope deep-sea communities, such as fishes ( Dysommina rugosa and Symphurus nebulosus ), echinoderms ( Odontaster robustus , Echinus wallisi , and Gracilechinus affinis ), and shrimp, ( Alvinocaris markensis ). The presence of these seeps thereby increases the overall trophic and community diversity of the USAM continental slope. Given the presence of hundreds of seeps within the region, primary production at seeps may serve as an important, yet unquantified, energy source to the USAM deep-sea environment.

Delaware, Maryland, North Carolina, Virginia↗
USGS2018

Seafloor fluid seeps on Kimki Ridge, offshore southern California: Links to active strike-slip faulting

The Kimki Ridge fluid seeps are located in western Catalina Basin about 60 km southwest of the southern California mainland and at a water depth of approximately 1100 m. Multichannel seismic reflection profiles collected by the U.S. Geological Survey (USGS) in 2014 show acoustic transparency within the Kimki Ridge, suggesting the possibility of fluid seeps and possible sub-seafloor fluid pathways. Subsequent multibeam bathymetric and backscatter intensity data collected during a cooperative University of Washington/USGS cruise in early 2016 show subtle seafloor buildups with high acoustic backscatter (reflectivity) in three places along Kimki Ridge, supporting the existence of fluid seepage. A Remotely Operated Vehicle (ROV) dive, conducted as part of the Nautilus Exploration Program, took place in August 2016 to confirm the presence of these previously unknown seeps and document their characteristics as well as those of any associated biological communities. Two of the three seeps were explored by ROV, and showed abundant evidence of fluid seepage, including characteristic algal mats, chemosynthetic clams, and authigenic carbonate formation. The seeps are comprised of carbonate buildups 1–3 m thick and 300–500 m across. Within these areas, we interpret broad crater-like depressions 30–50 m across and 1–2 m deep to be individual seep vents. The seep areas appear to be broad zones of diffuse seepage that support chemosynthetic biologic communities; however, active venting was not observed. Geochemical analyses of rock samples collected from the seeps indicate microbially driven anaerobic oxidation of methane at or near the sediment water interface. Seismic-reflection profiles show chimney-like fluid pathways along the limbs and in the axis of the fold forming Kimki Ridge, and evidence of methane in shallow sediments can be traced into the adjacent Catalina Basin. A system of closely spaced faults located at the axis of the Kimki Ridge anticline may serve as pathways to allow fluid flow to the seafloor. Our data are consistent with other studies that suggest that transpression is an important component in the formation and localization of fluid seeps in a strike-slip setting, implying that seep formation may be a common occurrence at fault stepovers or transpressional bends in strike-slip systems.

California↗