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At least 217 records · Page 12Linked to original sources
USGS1965

Quality of surface waters in the lower Columbia River Basin

This report, made during 1959-60, provides reconnaissance data on the quality of waters in the lower Columbia River basin ; information on present and future water problems in the basin; and data that can be employed both in water-use studies and in planning future industrial, municipal, and agricultural expansion within this area. The lower Columbia River basin consists of approximately 46,000 square miles downstream from the confluence of the Snake and Columbia Rivers The region can be divided into three geographic areas. The first is the heavily forested, sparsely populated mountain regions in which quality of water in general is related to geologic and climatological factors. The second is a semiarid plateau east of the Cascade Mountains; there differences in geology and precipitation, together with more intensive use of available water for irrigation, bring about marked differences in water quality. The third is the Willamette-Puget trough area in which are concentrated most of the industry and population and in which water quality is influenced by sewage and industrial waste disposal. The majority of the streams in the lower Columbia River basin are calcium magnesium bicarbonate waters. In general, the rivers rising in the. Coast Range and on the west slope of the Cascade Range contain less than 100 parts per million of dissolved solids, and hardness of the water is less than 50 parts per million. Headwater reaches of the streams on the east slope of the Cascade Range are similar to those on the west slope; but, downstream, irrigation return flows cause the dissolved-solids content and hardness to increase. Most of the waters, however, remain calcium magnesium bicarbonate in type. The highest observed dissolved-solids concentrations and also some changes in chemical composition occur in the streams draining the more arid parts of the area. In these parts, irrigation is chiefly responsible for increasing the dissolved-solids concentration and altering the chemical composition of the streams. The maximum dissolved-solids concentration and hardness of water observed in major irrigation areas were 507 and 262 parts per million, respectively, for the. Walla Walla River near Touchet, Wash. In terms of the U.S. Salinity Laboratory Staff classification (1954, p. 80), water in most streams in the basin has low salinity and sodium hazards and is suitable for irrigation. A salt-balance problem does exist in the Hermiston-Stanfield, Oreg., area of the Umatilla River basin, and because of poor drainage, improper irrigation practices could cause salt-balance problems in the Willamette River Valley, Oreg., in which irrigation is rapidly increasing. Pollution by sewage disposal has reached undesirable levels in the Walla Walla River, in the Willamette River from Eugene to Portland, Oreg., and in the Columbia River from Portland to Puget Island. In the lower reaches of the Willamette River, the pollution load from sewage and industrial-waste disposal at times depletes the dissolved oxygen in the water to concentrations below what is considered necessary for aquatic life. Water in most of the tributaries to the lower Columbia River is of excellent quality and after some treatment could be used for industrial and municipal supplies. The principal treatment required would be disinfection and turbidity removal.

Water Supply Paper↗
USGS2006

Contaminant exposure and potential effects on terrestrial vertebrates residing in the National Capital Region network and Mid-Atlantic network

Part of the mission of the National Park Service is to preserve the natural resources, processes, systems, and associated values of its units in an unimpaired condition. Environmental contamination and pollution processes are well recognized stressors addressed by its management policies and plans. A recent study indicates that contemporary terrestrial vertebrate ecotoxicological data are lacking for 59 of 126 Park Service units located in coastal watersheds exhibiting serious water quality problems or high vulnerability to pollution. Based upon these findings, a more in-depth evaluation of contaminant threats and ecotoxicological data gaps related to terrestrial vertebrates was undertaken at 23 Inventory and Monitoring National Park units in National Capital Region and Mid-Atlantic Networks. Ecotoxicological data were compiled for each park unit through literature searches and meetings with Park Service personnel. Information on contemporary and on persistent legacy pollutants in air, water, soil, and terrestrial vertebrates (amphibians, reptiles, birds and mammals) were evaluated. To identify contaminant threats in proximity to the 23 Park Service study units, data was gathered on National Priority List Superfund sites, Section 303(d) Impaired Waterbodies, the number and relative toxicity of current use pesticides and herbicides, Toxic Release Inventory sites and discharge of priority pollutants, and Fish Consumption Advisories. A metric was derived that described the quality and quantity of existing data for each park, and in combination with known contaminant threats, park units in need of additional study were identified. Results demonstrated that over half of the Park Service study units are near Toxic Release Inventory sites discharging dioxins, polychlorinated biphenyls, lead or mercury into air or water, and fish consumption advisories are in effect at or near 22 of the 23 study units. Pesticide and herbicide use at the park units is minimal, with the exception of those units with significant agricultural leases. Despite highly regulated use, many of the pesticides and herbicides applied are believed to be highly toxic to amphibians, and some of the compounds are also highly toxic to birds. Only 70 reports were found that describe terrestrial vertebrate ecotoxicology data on or near the study units. Of the greater than 75,000 compounds in commerce in the United States, existing terrestrial vertebrate exposure and effects data in the pr esent study were limited to 58 legacy organochlorine pesticides, polychlorinated biphenyls and individual congeners, insecticides and rodenticides, metals, and some contemporary compounds (e.g., polybrominated diphenyl ether flame retardants, and alkylphenol and ethoxylate surfactants). Based upon these and other findings, ecotoxicological monitoring and research investigations of terrestrial vertebrates are warranted at several National Parks. These include Shenandoah National Park, Richmond National Battlefield, Chesapeake & Ohio Canal National Historic Park, Valley Forge National Historic Park, Hopewell Furnace National Historic Site, Monocacy National Battlefield, and Harpers Ferry National Historic Park. The types of investigations vary according to the species present at these parks and potential contaminant threats, but should focus on contemporary use pesticides and herbicides, polychlorinated biphenyls, mercury, lead, and perhaps, emerging contaminants including antibiotics, flame retardants, pharmaceuticals, and surfactants. Other management recommendations include additional training for natural resource staff members in the area of ecotoxicology, inclusion of terrestrial vertebrate contaminant monitoring and the Contaminant Assessment Process (U.S. Geological Survey Biomonitoring of Environmental Status and Trends Project) into the National Park Service Vital Signs Program, development of protocols for hand ling and toxicological analysis of dead or seemingly affected wildlife, consideration of some alternative methods and compounds for pest management and weed control, and use of non-toxic fishing tackle by visitors.

Maryland, Pennsylvania, Virginia↗
USGS1989

Stream temperature investigations: field and analytic methods

This document provides guidance to the user of the U.S. Fish and Wildlife Service’s Stream Network Temperature Model (SNTEMP). Planning a temperature study is discussed in terms of understanding the management objectives and ensuring that the questions will be accurately answered with the modeling approach being used. A sensitivity analysis of SNTEMP is presented to illustrate which input variables are most important in predicting stream temperatures. This information helps prioritize data collection activities, highlights the need for quality control, focuses on which parameters can be estimated rather than measured, and offers a broader perspective on management options in terms of knowing where the biggest temperature response will be felt. All of the major input variables for stream geometry, meteorology, and hydrology are discussed in detail. Each variable is defined, with guidance given on how to measure it, what kind of equipment to use, where to obtain it from another agency, and how to calculate it if the data are in a form other than that required by SNTEMP. Examples are presented for the various forms in which water temperature, discharge, and meteorological data are commonly found. Ranges of values for certain input variables that are difficult to measure of estimate are given. Particular attention is given to those variables not commonly understood by field biologists likely to be involved in a stream temperature study. Pertinent literature is cited for each variable, with emphasis on how other people have treated particular problems and on results they have found. Model calibration, verification, and validation steps are defined and outlines, with measures of "goodness-of-fit" given for comparing simulated stream temperatures with observed values. The question of how good is good enough is explored, and attention is given to the kinds of simulation and data reduction errors that one should be alert for. Some special cases dealing with ice and reservoir temperature are mentioned. Special attention is given to understanding micro-thermal habitats that act as important thermal refugia under low flow conditions; their causes, extent, and management implications are discussed. Alternative public domain stream and reservoir temperature models are contrasted with SNTEMP. A distinction is made between steady-flow and dynamic-flow models and their respective capabilities. Regression models are offered as an alternative approach for some situations, with appropriate mathematical formulas suggested. Appendices provide information on State and Federal agencies that are good data sources, vendors for field instrumentation, and small computer programs useful in data reduction.

Report↗
USGS2021

A reassessment of Chao2 estimates for population monitoring of grizzly bears in the Greater Yellowstone Ecosystem

The Yellowstone Ecosystem Subcommittee (YES) asked the Interagency Grizzly Bear Study Team (IGBST) to re-assess a technique used in annual population estimation and trend monitoring of grizzly bears in the Greater Yellowstone Ecosystem (GYE). This technique is referred to as the Chao2 approach and estimates the number of females with cubs-of-the-year (hereafter, females with cubs) and, in association with other demographic data, is used by the IGBST to produce annual population estimates. Females with cubs are an easily recognizable population segment, and trends for this reproductive segment of the population are assumed to be representative of trend for the entire population. The overarching objective of the analyses presented in this report was to provide a more accurate representation of the GYE grizzly bear population using the current methodologies in place. Specifically, we addressed two limitations of the current Chao2 approach: 1) underestimation bias associated with a distance criterion used to differentiate annual sightings of females with cubs into unique individuals and 2) limitations of the model-averaging approach to effectively distinguish among potential future population trajectories (decline, stability, and growth). The first issue addressed in this report is the underestimation bias associated with the rule set that Knight et al. (1995) developed to differentiate sightings of females with cubs into unique individuals (i.e., unique family groups). The rule set was originally designed to be conservative by reducing the risk of identifying more females with cubs than actually existed, primarily through use of a distance criterion of 30 km to separate sightings of unique females. This approach resulted in an underestimation bias, and previous research demonstrated that this bias increases with increasing number of females with cubs. Using location data from radio-marked females with cubs, we evaluated alternative distance criteria by simulating scenarios with varying numbers of true females with cubs and sightings. Findings from these analyses demonstrate that bias in estimates of females with cubs can be substantially reduced by changing the 30-km distance criterion in the rule set to 16 km, which produced relatively unbiased estimates. Findings also indicate, however, the importance of adaptability with regard to the distance criteria because of the complex relationships and biases among the various parameters involved in estimation of unique females with cubs. The total number of annual sightings and the true number of females with cubs play particularly important roles. Whereas these analyses remind us that there is no perfect approach to estimating the number of females with cubs from sightings under various scenarios, they provide us with new tools to determine when and how to adapt the monitoring program. The second issue we were tasked to investigate was the potential for improvement of the technique referred to as model-averaging, which serves to smooth relatively high variation in annual estimates. This technique was chosen by YES as the basis for monitoring the Yellowstone grizzly bear population, as described in the 2016 Conservation Strategy. This choice was made in part because the technique has been well documented and population estimates derived from counts of females with cubs are conservative. Using simulations of population trends, we demonstrate why the model-averaging technique currently used cannot distinguish between plausible future trend scenarios. As a suitable alternative to model averaging, we propose the use of generalized additive models (GAMs). Using a suite of simulated trend dynamics relevant to management, we demonstrate GAM performance for tracking trends in females with cubs within the context of the annual monitoring program. We demonstrate the ability to not only document directional changes in population trend but also patterns of stabilization or resiliency after such changes. Furthermore, the proposed monitoring framework provides objective measures useful for early detection of directional changes in trend. The new framework is flexible, allowing retrospective analysis of Chao2-based estimates and future applications to time series of other population metrics, such as vital rates. The aforementioned updates provide us with new tools to determine when and how to adapt the monitoring program. Within the context of current monitoring protocols and effort, and considering the full suite of simulations presented in this report and previous studies, the IGBST plans to incorporate the following changes to the population monitoring protocol: 1) modify the distance criterion, starting with 16 km under current sampling conditions and 2) revise the population monitoring framework using GAMs as the basis for smoothing of annual estimates and detecting trends and changes in trend. Implementation of the 16-km distance criterion combined with use of GAM techniques would affect some of the population metrics (e.g., annual population size and uncertainty, population trend, mortality rates) used to inform management responses. A primary consideration is that the 16-km distance criterion results in total population estimates derived from the Chao2 estimates that are greater than those we have reported in the past. This increase is due to a change in the implementation of the technique and more accurately represents the number of females with cubs in the GYE grizzly bear population. Additionally, interpretation of retrospective trend patterns may change due to the combination of a different distance criterion and enhanced trend monitoring based on the GAM approach we present here. Implementation will require relatively minor changes in the monitoring protocols described in Appendices B and C of the 2016 Conservation Strategy. Finally, we note that the IGBST has ongoing investigations into the merits of an Integrated Population Model (IPM), for which annual Chao2-based estimates are important input data. The IGBST plans to continue those investigations using the 16-km distance criterion to derive Chao2 estimates.

Idaho, Montana, Wyoming↗
USGS1981

Map showing aeromagnetic interpretation of the Baker-Cypress BLM Instant Study Area and Timbered Crater Forest Service Further Planning Areas, Modoc, Shasta, and Siskiyou counties, California

The data for the aeromagnetic map of the Baker-Cypress and Timbered crater areas were collected in 1978 and compiled at a scale of 1 :62,500 (U,S, Geological Survey, 1979). East-west traverses were spaced at 0.8-km intervals at a constant altitude of 1370 m (4500 ft) above sea level, Contour interval is 20 and 100 gammas, depending upon the steepness of local gradients in the Earth's magnetic field. A regional magnetic field (the International Geomagnetic Reference Field - 1975, updated to the month flown) of approximately 5-6 gammas/km was removed from the data be fore con touring.

California↗
USGS2015

Conservation planning for offsetting the impacts of development: a case study of biodiversity and renewable energy in the Mojave Desert

Balancing society’s competing needs of development and conservation requires careful consideration of tradeoffs. Renewable energy development and biodiversity conservation are often considered beneficial environmental goals. The direct footprint and disturbance of renewable energy, however, can displace species’ habitat and negatively impact populations and natural communities if sited without ecological consideration. Offsets have emerged as a potentially useful tool to mitigate residual impacts after trying to avoid, minimize, or restore affected sites. Yet the problem of efficiently designing a set of offset sites becomes increasingly complex where many species or many sites are involved. Spatial conservation prioritization tools are designed to handle this problem, but have seen little application to offset siting and analysis. To address this need we designed an offset siting support tool for the Desert Renewable Energy Conservation Plan (DRECP) of California, and present a case study of hypothetical impacts from solar development in the Western Mojave subsection. We compare two offset scenarios designed to mitigate a hypothetical 15,331 ha derived from proposed utility-scale solar energy development (USSED) projects. The first scenario prioritizes offsets based precisely on impacted features, while the second scenario offsets impacts to maximize biodiversity conservation gains in the region. The two methods only agree on 28% of their prioritized sites and differ in meeting species-specific offset goals. Differences between the two scenarios highlight the importance of clearly specifying choices and priorities for offset siting and mitigation in general. Similarly, the effects of background climate and land use change may lessen the durability or effectiveness of offsets if not considered. Our offset siting support tool was designed specifically for the DRECP area, but with minor code modification could work well in other offset analyses, and could provide continuing support for a potentially innovative mitigation solution to environmental impacts.

California↗
USGS2008

Relations between and among contaminant concentrations and biomarkers in black bass (Micropterus spp.) and common carp (Cyprinus carpio) from large U.S. rivers, 1995-2004

Environmental contaminant and biomarker monitoring data from major U.S. river basins were summarized for black bass (Micropterus spp.) and common carp (Cyprinus carpio) sampled over a nine year period. Cumulative frequency distributions revealed taxon differences for many organochlorine residue concentrations, elemental contaminant concentrations, and biomarkers, but few gender differences were evident for chemical concentrations. Concentrations of dacthal, pentachloroanisole, p,p???-DDE, endosulfan sulfate, barium, cadmium, copper, manganese, lead, selenium, vanadium, and zinc were greater in carp than bass, but concentrations of mercury and magnesium were greater in bass. Gender differences were evident in bass for mercury and in carp for zinc, but the differences were small compared to taxon differences. Greater vitellogenin concentrations, 17??-estradiol concentrations, 17??-estradiol/11-ketotestosterone ratios, and percent oocyte atresia in female carp compared to female bass may be related to the sequential spawning of carp. Regression analyses indicated that as much as 78% of biomarker variation was explained by chemical contaminant concentrations. Sites grouped consistently by river basin in the chemical contaminant principal components analysis (PCA) models and were driven by mercury, magnesium, barium, mirex, and oxychlordane. PCA models for the biomarkers did not group the sites by basin for either bass or carp. Statistical analyses and data interpretation were limited by the study design. The implications of these limitations are discussed. Recommendations to be considered during the planning of future monitoring studies include the exclusion of gender- and species-specific sampling for certain chemical contaminants considering analytical methods with appropriate sensitivities; and allowing for the addition of new chemical and biological variables as methods and information needs evolve. ?? The Royal Society of Chemistry.

Journal of Environmental Monitoring↗
USGS1937

Ground water in Creek County, Oklahoma

Creek County has been designated as a problem area by the Land Use Planning Section of the Resettlement Administration. Some of the earliest oil fields to brought into production were situated in and near this county, and new fields have been opened from time to time during the ensuing years. The production of the newer fields, however, has not kept pace with the exhaustion of the older fields, and the county now presents an excellent picture of the problems involved in adjusting a population to lands that are nearly depleted of their mineral wealth. Values of land have been greatly depressed; tax collection is far in arrears; tenancy is widespread; and in addition more people will apparently be forced to depend on the income from agriculture than the land seems capable of supporting. The county as a whole is at best indifferently suitable for general farming. The Land Use planning Section proposes to study the present and seemingly immanent maladjustments of population to the resources of the land, and make recommendations for their correction. The writer was detailed to the Land Use Planning Section of Region VIII for the purposes of making studies of ground water problems in the region. In Creek County two investigations were made. In September, 1936, the writer spent about ten days investigating the availability of ground water for the irrigation of garden crops during drouths. If it proved feasible to do this generally throughout the county, the Land Use Planning Section might be able to encourage this practice. The second investigation made by the writer was in regard to the extent to which ground water supplies have been damaged by oil well brines. He was in county for four days late in January 1937, and again in March, 1937. During part of the second field trip he was accompanied by R.M. Dixon, sanitary engineer of the Water Utilization Unit of the Resettlement Administration. (available as photostat copy only)

Open-File Report↗
USGS2010

Columbia River Project water use plan: Mid Columbia River sturgeon incubation and rearing study (Year 1)

This report describes the results from the first year of a three-year investigation on the effects of different thermal regimes on incubation and rearing early life stages of white sturgeon. The Columbia River has been significantly altered by the construction of dams resulting in annual flows and water temperatures that differ from historical levels. White sturgeon have been demonstrated to spawn in two very distinct sections of the Columbia River in British Columbia, Canada, which are both located immediately downstream of hydropower facilities. The thermal regimes differ substantially between these two areas. The general approach of this study was to incubate and rear white sturgeon early life stages under two thermal regimes; one mimicking the current, cool water regime of the mid Columbia River downstream from Revelstoke Dam, and one mimicking a warmer regime similar to conditions found on the lower Columbia River at the international border. It describes the development of thermal profiles to be used in laboratory experiments from historic Columbia River temperature data. First-year results suggest that thermal regimes during incubation influence rate of egg development and size at hatch. Eggs incubated under the warm thermal regime hatched sooner than those incubated under the cool thermal regime. Mean length of free embryos at hatch was significantly different between thermal regimes with free embryos from the cool thermal regime being larger at hatch. However, free embryos from the warm thermal regime had a significantly higher mean weight at hatch. Mortality between hatch and initiation of feeding was extremely high in both treatments and virtually all fish reared under the warm thermal regime died prior to initiation of feeding. A proportion of the fish reared under the cool thermal regime did begin feeding; however, growth rates were extremely low as the onset of feeding corresponded with decreasing thermal regime temperatures. Chronic low levels of mortality resulted in few fish remaining when the growth trials were terminated at 154 days after egg fertilization. The starvation trials showed that the fish in the warm thermal regime exhausted their yolk reserves faster than fish in the cool thermal regime. The ability to resist starvation may be important in dispersal to downstream rearing areas.

British Columbia↗
USGS2013

Movement and longevity of imperiled Okaloosa Darters (Etheostoma okaloosae)

Movement and longevity studies inform management and conservation plans for imperiled organisms. We used a mark–recapture study to reveal information about these key biological characteristics for imperiled Okaloosa Darters (Etheostoma okaloosae). Okaloosa Darters were captured from 20 m reaches at six separate streams, marked with VIE on the left or right dorsum according to the side of the stream from which they were captured, and released on the same side where they were captured. Okaloosa Darters were recounted (but not recaptured) at 24 h and one month, and then recaptured once per year for the following eight years. During the final recapture year, we measured standard length of all Okaloosa Darters and constructed length frequency distributions to identify distinct cohorts. We found that significant numbers of Okaloosa Darters remained within their 20 m reaches after 24 h (31%), one month (45%), and one year (22%) and rarely crossed open, sandy stream channels from one side to the other. Our recapture data and length frequency distributions indicate that Okaloosa Darters live longer than the 2–3 years suggested by previous authors. One of our recaptured fish was at least eight years old, making Okaloosa Darters the most long-lived etheostomine.

Copeia↗
USGS1991

National water-quality assessment program : the Albemarle- Pamlico drainage

In 1991, the U.S. Geological Survey (USGS) began to implement a full-scale National Water-Quality Assessment (NAWQA) program. Long-term goals of the NAWQA program are to describe the status and trends in the quality of a large, representative part of the Nation's surface- and ground-water resources and to provide a sound, scientific understanding of the primary natural and human factors affecting the quality of these resources. In meeting these goals, the program will produce a wealth of water quality information that will be useful to policy makers and managers at the national, State, and local levels. Study-unit investigations constitute a major component of the NAWQA program, forming the principal building blocks on which national-level assessment activities are based. The 60 study-unit investigations that make up the program are hydrologic systems that include parts of most major river basins and aquifer systems. These study units cover areas of 1,200 to more than 65,000 square miles and incorporate about 60 to 70 percent of the Nation's water use and population served by public water supply. In 1991, the Albemarle-Pamlico drainage was among the first 20 NAWQA study units selected for study under the full-scale implementation plan. The Albemarle-Pamlico drainage study will examine the physical, chemical, and biological aspects of water quality issues in a coordinated investigation of surface water and ground water in the Albemarle-Pamlico drainage basin. The quantity and quality of discharge from the Albemarle-Pamlico drainage basin contribute to some water quality problems in the biologically sensitive waters of Albemarle and Pamlico Sounds. A retrospective analysis of existing water quality data will precede a 3-year period of intensive data-collection and analysis activities. The data resulting from this study and the improved understanding of important processes and issues in the upstream part of the study unit will enhance understanding of the quality of water in Albemarle-Pamlico Sounds, the second largest estuarine system in the United States.

Open-File Report↗
USGS2012

Adjusting survival estimates for premature transmitter failure: A case study from the Sacramento-San Joaquin Delta

In telemetry studies, premature tag failure causes negative bias in fish survival estimates because tag failure is interpreted as fish mortality. We used mark-recapture modeling to adjust estimates of fish survival for a previous study where premature tag failure was documented. High rates of tag failure occurred during the Vernalis Adaptive Management Plan’s (VAMP) 2008 study to estimate survival of fall-run Chinook salmon ( Oncorhynchus tshawytscha ) during migration through the San Joaquin River and Sacramento-San Joaquin Delta, California. Due to a high rate of tag failure, the observed travel time distribution was likely negatively biased, resulting in an underestimate of tag survival probability in this study. Consequently, the bias-adjustment method resulted in only a small increase in estimated fish survival when the observed travel time distribution was used to estimate the probability of tag survival. Since the bias-adjustment failed to remove bias, we used historical travel time data and conducted a sensitivity analysis to examine how fish survival might have varied across a range of tag survival probabilities. Our analysis suggested that fish survival estimates were low (95% confidence bounds range from 0.052 to 0.227) over a wide range of plausible tag survival probabilities (0.48–1.00), and this finding is consistent with other studies in this system. When tags fail at a high rate, available methods to adjust for the bias may perform poorly. Our example highlights the importance of evaluating the tag life assumption during survival studies, and presents a simple framework for evaluating adjusted survival estimates when auxiliary travel time data are available.

California↗
USGS2011

Evaluation of the genetic distinctiveness of Greater Sage-grouse in the Bi-State Planning Area

The purpose of this study was to further characterize a distinct population of Greater Sage-grouse: the population located along the border between Nevada and California (Bi-State Planning Area) and centered around the Mono Basin. This population was previously determined to be genetically distinct from other Greater Sage-grouse populations across their range. Previous genetic work focused on characterizing genetic variation across the species' range and thereby used a coarse sampling approach for species characterization. The goal of this study was to investigate this population further by obtaining samples from breeding locations within the population and analyzing those samples with the same mitochondrial and microsatellite loci used in previous studies. Blood samples were collected in six locations within the Bi-State Planning Area. Genetic data from subpopulations were then compared with each other and also with two populations outside of the Bi-State Planning Area. Particular attention was paid to subpopulation boundaries and internal dynamics by drawing comparisons among particular regions within the Bi-State Planning Area and regions proximal to it. All newly sampled subpopulations contained mitochondrial haplotypes and allele frequencies that were consistent with the genetically unique Bi-State (Mono Basin) Greater Sage-grouse described previously. This reinforces the fact that this group of Greater Sage-grouse is genetically unique and warrants special attention. Maintaining the genetic integrity of this population could protect the evolutionary potential of this population of Greater Sage-grouse. Additionally, the White Mountains subpopulation was found to be significantly distinct from all other Bi-State subpopulations.

Open-File Report↗
USGS1996

Water-quality assessment of southern Florida: An overview of available information on surface- and ground-water quality and ecology

This report summarizes water-quality conditions, issues of concern, and management efforts underway in southern Florida. The report is designed to provide a conceptual framework for the Southern Florida National Water Quality Assessment (NAWQA) study that began in 1994. The report makes reference to the most important water-quality literature pertaining to southern Florida, to water-quality studies that are underway or planned, and to topics which are of high priority in the study unit. These topics include: the availability and suit ability of water for competing demands; nutrient enrichment of the Everglades; transport, degradation, and effects of pesticides; and the sources and cycling of mercury in the ecosystem. The report also includes a retrospective analysis and conceptual presentation of nutrient loading, which is a high priority for the national NAWQA Program and for regional water-quality managers. Nutrient contributions from point and nonpoint sources are estimated for nine basins in the study area and are discussed in relation to land use. Fertilizer is the dominant source of phosphorus in eight basins and the dominant source of nitrogen in at least five basins. Atmospheric sources of nitrogen contribute more than 20 percent of the total nitrogen input to all basins and are the dominant source of nitrogen input to Lake Okeechobee and the Everglades. Nutrient loads are also estimated in selected canal and river outflows in southern Florida to provide a spatial overview of the magnitude of nutrient loading to coastal waters. Annual phosphorus loads from the Peace River are the highest in the study unit; annual phosphorus loads from the Caloosahatchee River and the major Palm Beach canals are also high, compared to other parts of southern Florida. Estimated annual loads of phosphorus from parts of the Big Cypress Basin and the S-12 water-control structures of the Tamiami Canal are low compared with estimated phosphorus loads in outflows in the northern part of the study unit. Annual nitrogen loads in southern Florida were highest in outflows from the Caloosahatchee River Basin and the major Palm Beach canals. Nitrogen loads in outflows from parts of the Big Cypress subbasin were lower than those estimated to the north.

Florida↗
USGS2018

The suitability of using dissolved gases to determine groundwater discharge to high gradient streams

Determining groundwater discharge to streams using dissolved gases is known to be useful over a wide range of streamflow rates but the suitability of dissolved gas methods to determine discharge rates in high gradient mountain streams has not been sufficiently tested, even though headwater streams are critical as ecological habitats and water resources. The aim of this study is to test the suitability of using dissolved gases to determine groundwater discharge rates to high gradient streams by field experiments in a well-characterized, high gradient mountain stream and a literature review. At a reach scale (550 m) we combined stream and groundwater radon activity measurements with an in-stream SF 6 tracer test. By means of numerical modeling we determined gas exchange velocities and derived very low groundwater discharge rates (∼15% of streamflow). These groundwater discharge rates are below the uncertainty range of physical streamflow measurements and consistent with temperature, specific conductance and streamflow measured at multiple locations along the reach. At a watershed-scale (4 km), we measured CFC-12 and δ 18 O concentrations and determined gas exchange velocities and groundwater discharge rates with the same numerical model. The groundwater discharge rates along the 4 km stream reach were highly variable, but were consistent with the values derived in the detailed study reach. Additionally, we synthesized literature values of gas exchange velocities for different stream gradients which show an empirical relationship that will be valuable in planning future dissolved gas studies on streams with various gradients. In sum, we show that multiple dissolved gas tracers can be used to determine groundwater discharge to high gradient mountain streams from reach to watershed scales.

California↗
USGS2017

Application of paleoflood surveys for the southern Black Hills of South Dakota

Flood-frequency analyses for the Black Hills area have especially large uncertainties and are especially important for planning purposes because of a history of extremely large and damaging floods, such as the extreme floods of June 9–10, 1972. Geology, topography, and climatology are additional complicating factors for flood-frequency characterization for the area. Two previous paleoflood studies for the Black Hills area indicated good potential for improving flood-frequency analyses through implementation of paleoflood investigations. The objectives of this study (SD2010-04) for the southern Black Hills were to (1) develop long-term flood chronologies and associated peak-flow frequency analyses for selected stream reaches by applying paleoflood hydrology approaches; and (2) develop flood-frequency information regarding “high-elevation” stream reaches to help address questions regarding differential potential for generation of exceptionally strong rain-producing thunderstorms across elevation gradients in the area. Neither objective was accomplished because the study was terminated before planned completion. Substantial efforts could be applied for only 2 of the 12 research tasks prior to study termination. These were task 3 (preliminary reconnaissance) and task 4 (activities associated with Section 106 of the National Historic Preservation Act). Field reconnaissance conducted along 10 candidate streams indicated that conditions in the southern Black Hills appear quite favorable for conducting paleoflood investigations. All 10 candidate streams had moderate to good potential for favorable paleoflood evidence, and in general are well constrained in relatively narrow canyon reaches, which provides good sensitivity for changes in stage, relative to discharge. Task 4 (Section 106 activities) was needed because alcoves and rock shelters that are well suited for deposition and preservation of paleoflood evidence may have been used as shelters or cache locations by indigenous inhabitants and thus may be eligible for consideration as historic properties because of possible archaeological or cultural materials. The complexity of the Section 106 concerns and issues became progressively more apparent as the study evolved. The study eventually was terminated when it became apparent that the resources needed to address the Section 106 issues would overwhelm the resources available for study implementation. In the event of consideration of future re-implementation, approaches that might help expedite Section 106 issues could include (1) a partnership with another Federal agency that has substantial experience with the Section 106 process; (2) securing assistance from a consultant that could help with both the Section 106 process and the required archaeological component; and (3) partnering with a tribal college with archaeological or earth science/hydrology programs, which could help make this study become part of a learning exercise.

South Dakota↗
USGS1967

Mineral and chemical variations within an ash-flow sheet from Aso caldera, Southwestern Japan

Although products of individual volcanic eruptions, especially voluminous ash-flow eruptions, have been considered among the best available samples of natural magmas, detailed petrographic and chemical study indicates that bulk compositions of unaltered Pleistocene ash-flow tuffs from Aso caldera, Japan, deviate significantly from original magmatic compositions. The last major ash-flow sheet from Aso caldera is as much as 150 meters thick and shows a general vertical compositional change from phenocryst-poor rhyodacite upward into phenocryst-rich trachyandesite; this change apparently reflects in inverse order a compositionally zoned magma chamber in which more silicic magma overlay more mafic magma. Details of these magmatic variations were obscured, however, by: (1) mixing of compositionally distinct batches of magma during upwelling in the vent, as indicated by layering and other heterogeneities within single pumice lumps; (2) mixing of particulate fragments-pumice lumps, ash, and phenocrysts-of varied compositions during emplacement, with the result that separate pumice lenses from a single small outcrop may have a compositional range nearly as great as the bulk-rook variation of the entire sheet; (3) density sorting of phenocrysts and ash during eruption and emplacement, resulting in systematic modal variations with distance from the caldera; (4) addition of xenocrysts, resulting in significant contamination and modification of proportions of crystals in the tuffs; and (5) ground-water leaching of glassy fractions during hydration after cooling. Similar complexities characterize ash-flow tuffs under study in southwestern Nevada and in the San Juan Mountains, Colorado, and probably are widespread in other ash-flow fields as well. Caution and careful planning are required in study of the magmatic chemistry and phenocryst mineralogy of these rocks. ?? 1967 Springer-Verlag.

Contributions to Mineralogy and Petrology↗
USGS2023

Cryptic declines of small, cold-water specialists highlight potential vulnerabilities of headwater streams as climate refugia

Increasing temperatures and climate-driven disturbances like wildfire are a growing threat to many species, including cold-water specialists. Montane areas and cold streams are often considered climate refugia that buffer communities against change. However, climate refugia are often species-specific, and despite growing awareness that life histories and habitat requirements shape responses to change, small or non-game species are often under-represented in monitoring and planning programs. A recent study in Montana, USA, revealed much larger warming-related declines in occupancy for small, non-game slimy sculpin ( Cottus cognatus ) between 1993 and 1995 and 2011–2013 than for two socially valued salmonid fishes that shape regional conservation efforts. To broaden insight into climate change vulnerabilities of headwater stream communities, we analyzed data for Rocky Mountain tailed frogs ( Ascaphus montanus ) that were collected during those same electrofishing surveys for fishes from 241 stream reaches. Tailed frogs occupy small, cold streams and have several life-history traits that make them sensitive to environmental change. We used a Bayesian framework to estimate occupancy, colonization, and extinction dynamics relative to forest canopy, estimated stream temperature, and wildfire effects. Tailed frog occupancy decreased by 19 % from 1993 to 1995 to 2011–2013. Changes in occupancy were linked with increased extinction and reduced colonization where there were fire-driven reductions in canopy cover, and reduced colonization of stream reaches that warmed on average 0.8 °C during the study. Our results highlight extensive extirpations for oft-overlooked species and emphasize the importance of including species with diverse habitat requirements and life histories in conservation planning.

Idaho, Montana↗