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USGS2021

Human activities and weather drive contact rates of wintering elk

Wildlife aggregation patterns can influence disease transmission. However, limited research evaluates the influence of anthropogenic and natural factors on aggregation. Many managers would like to reduce wildlife contact rates, driven by aggregation, to limit disease transmission. We develop a novel analytical framework to quantify how management activities such as supplemental feeding and hunting versus weather drive contact rates while accounting for correlated contacts. We apply the framework to the National Elk Refuge (NER), Wyoming, USA, where the probable arrival of chronic wasting disease (CWD) has magnified concerns. We used a daily proximity index to measure contact rates among 68 global positioning system collared elk from 2016 to 2019. We modelled contact rates as a function of abiotic weather‐related effects, anthropogenic effects and aggregation from the prior day. The winter of 2017–2018 had greater natural forage availability and little snow, which led to a rare non‐feeding year on the NER and provided a unique opportunity to evaluate the effect of feeding on contact rates relative to other conditions. Supplemental feeding was the strongest predictor of aggregation, and contact rates were 2.6 times larger while feeding occurred compared to the baseline rate (0.34 and 0.13, respectively). Snow‐covered area was the second strongest predictor of contact rates highlighting the importance of abiotic factors to elk aggregation, but this effect had half the strength of feeding. These results are the first to show, even in animals that congregate naturally, how greatly supplemental feeding amplifies aggregation. Contact rates were also 23% lower during times when elk hunting was active (0.10) compared to the baseline. Synthesis and applications . Supplemental feeding increased contacts between elk well above the natural effects of weather, even after accounting for correlated movement expected in wintering ungulates. Similarly, differences in hunting season timing with adjacent areas led to an increase in contacts, suggesting an additional management option for reducing aggregation. The analytical framework presented supports the evaluation of temporally varying management actions that influence aggregation broadly and can be easily implemented whether the interest in changing aggregation is related to reduction of disease transmission, human–wildlife conflict or inter‐species competition.

Wyoming↗

USGS1981

Geochemical evidence for modern sediment accumulation on the continental shelf off southern New England

An area of fine-grained sediment approximately 170 km x 74 km in size, located in water depths between 60 m and 150 m, south of Martha's Vineyard, Mass., is a site of modern sediment deposition. The 14 C ages systematically increase with sediment depth from about 1,300 years B.P. at the surface to 8,000-10,000 years B.P. at the depth of maximum core penetration. The old age for the surface sediments probably results from a combination of deposition of old carbon and faunal mixing. In the finest sediments, the sedimentation rates were approximately 130 cm/1,000 yrs when deposition began and have decreased to about 25 cm/1,000 yrs. The decreasing sedimentation rate reflects a diminishing source of fine sediments, which presumably came from the Georges Bank and Nantucket Shoals area. Inventories of excess 210 Pb in undisturbed cores average 70 dpm/cm 2 (disintegrations per minute per square centimeter), more than two times higher than the flux of 210 Pb from the atmosphere and from 226 Ra decay in the overlying water. This additional influx of 210 Pb either must be with new fine-grained sediment material or from solutions that are stripped of their 210 Pb by particulates in the bottom nepheloid layer. Stable Pb concentrations in surface sediments are about 28 ppm, as much as two times higher than concentrations at depth. The high accumulation rates, 210 Pb inventories, and trace-metal profiles imply that this area is a modern sink for fine-grained sediments and for pollutants associated with particulate matter in the water column. To our knowledge, this is the only site of present-day natural deposition on the Continental Shelf off the eastern United States, exclusive of the Gulf of Maine. Because the net currents on the outer half of this Continental Shelf flow from northeast to southwest, this fine-grained deposit may receive its sediments and possible contaminants from the Nantucket Shoals and Georges Bank regions.

Massachusetts↗

USGS2024

Utilizing artificial nesting platforms as a management tool: Enhancing breeding productivity of Western Flycatchers (Empidonax difficilis occidentalis) in southwestern Colorado and southern Arizona, USA

Artificial nesting substrates have been added around the world for many cavity-nesting bird species, but this has not been undertaken as extensively for crevice-nesting birds. The Western Cordilleran Flycatcher ( Empidonax difficilis occidentalis ) is a migratory, crevice-nesting flycatcher that is nest-site limited, breeding in higher elevation riparian habitats throughout intermountain western North America. We tested the effectiveness of multiple artificial nesting platform types that this flycatcher would accept for nesting, and then utilizing the successful design established an experimental array of platforms in southwestern Colorado and southern Arizona. From 2008 to 2022 we documented Cordilleran Flycatcher breeding and the influence of nesting platforms on productivity of young and adult numbers. Breeding behaviors did not differ significantly between natural nest sites and platform nests, except that the nestling period was an average of 16.73 (+/- 0.98) days on platforms as compared to 15.92 (+/- 0.71) on human structures and 15.67 (+/- 0.48) days in natural locations. Platform nests had lower predation rates and greater rates of successful fledging when compared to natural locations. At both study locations platform nests doubled the number of young fledged each year. In Colorado, where Western Cordilleran Flycatchers were initially absent from areas, adult numbers increased following introduction of platforms, but in Arizona adult flycatcher numbers were not affected. Our findings demonstrate that the addition of artificial nesting platforms can enhance productivity and numbers of Western Cordilleran Flycatchers, and we hope that our findings will prove useful for the conservation of other crevice-nesting bird species.

Arizona, Colorado↗

USGS2007

Quantifying urban intensity in drainage basins for assessing stream ecological conditions

Three investigations are underway, as part of the U.S. Geological Survey's National Water-Quality Assessment (NAWQA) Program, to study the relation between varying levels of urban intensity in drainage basins and in-stream water quality, measured by physical, chemical, and biological factors. These studies are being conducted in the vicinities of Boston (Massachusetts), Salt Lake City (Utah), and Birmingham (Alabama), areas where rapid urbanization is occurring. For each study, water quality will be sampled in approximately 30 drainage basins that represent a gradient of urban intensity. This paper focuses on the methods used to characterize and select the basins used in the studies. It presents a methodology for limiting the variability of natural landscape characteristics in the potential study drainage basins and for ranking the magnitude of human influence, or urbanization, based on land cover, infrastructure, and socioeconomic data in potential study basins. Basin characterization efforts associated with the Boston study are described for illustrative purposes.

Alabama, Massachusetts, Utah↗

USGS2011

Indicators and protocols for monitoring impacts of formal and informal trails in protected areas

Trails are a common recreation infrastructure in protected areas and their conditions affect the quality of natural resources and visitor experiences. Various trail impact indicators and assessment protocols have been developed in support of monitoring programs, which are often used for management decision-making or as part of visitor capacity management frameworks. This paper reviews common indicators and assessment protocols for three types of trails, surfaced formal trails, unsurfaced formal trails, and informal (visitor-created) trails. Monitoring methods and selected data from three U.S. National Park Service units are presented to illustrate some common trail impact indicators and assessment options.

Journal of Tourism and Leisure Studies↗

USGS2020

High-resolution mapping of the freshwater-brine interface using deterministic and Bayesian inversion of airborne electromagnetic data at Paradox Valley, USA

Salt loads in the Colorado River Basin are a primary water quality concern. Natural groundwater brine discharge to the Dolores River where it passes through the collapsed salt anticline of the Paradox Valley in western Colorado is a significant source of salt to the Colorado River. An airborne electromagnetic survey of Paradox Valley has provided insights into the 3D distribution of brine in the surficial aquifer. A combination of stochastic and deterministic resistivity inversions were used to interpret the top of the freshwater-brine interface and to qualitatively describe the vertical salinity gradients across the interface. Low-resistivity regions indicative of brine occur near the land surface where brine discharges to the Dolores River and increase in depth several kilometers up-gradient along the axis of the valley. The most conductive parts of the brine plume are found in the areas below and adjacent to the river, suggesting that the brine becomes shallower and more concentrated as it reaches its natural discharge location. A significant freshwater lens overlying the brine west of the Dolores River is spatially correlated to the intermittent West Paradox Creek and agricultural irrigation. Below this lens, the transition from freshwater to brine appears to occur abruptly over a few meters and correlates to available well information. However, away from these regions and particularly with distance from the river, the freshwater-brine interface appears to be more diffuse.

Colorado↗

USGS1990

Collection and analysis of colloidal particles transported in the Mississippi River, U.S.A.

Sediment transport has long been recognized as an important mechanism for the transport of contaminants in surface waters. Suspended sediment has traditionally been divided into three size classes: sand-sized (>63 ??m), silt-sized (<63 ??m but settleable) and clay-sized (non-settleable). The first two classes are easily collected and characterized using screens (sand) and settling (silt). The clay-sized particles, more properly called colloids, are more difficult to collect and characterize, and until recently received little attention. From the hydrologic perspective, a colloid is a particle, droplet, or gas bubble with at least one dimension between 0.001 and 1 ??m. Because of their small size, colloids have large specific surface areas and high surface free energies which may facilitate sorption of hydrophobic materials. Understanding what types of colloids are present in a system, how contaminants of interest interact with these colloids, and what parameters control the transport of colloids in natural systems is critical if the relative importance of colloid-mediated transport is to be understood. This paper describes the collection, concentration and characterization of colloidal materials in the Mississippi River. Colloid concentrations, particle-size distributions, mineral composition and electrophoretic mobilities were determined. Techniques used are illustrated with samples collected at St. Louis, Missouri, U.S.A.Sediment transport has long been recognized as an important mechanism for the transport of contaminants in surface waters. Suspended sediment has traditionally been divided into three size classes: sand-sized (> 63 ??m), silt-sized (< 63 ??m but settleable) and clay-sized (non-settleable). The first two classes are easily collected and characterized using screens (sand) and settling (silt). The clay-sized particles, more properly called colloids, are more difficult to collect and characterize, and until recently received little attention. From the hydrologic perspective, a colloid is a particle, droplet, or gas bubble with at least one dimension between 0.001 and 1 ??m. Because of their small size, colloids have large specific surface areas and high surface free energies which may facilitate sorption of hydrophobic materials. Understanding what types of colloids are present in a system, how contaminants of interest interact with these colloids, and what parameters control the transport of colloids in natural systems is critical if the relative importance of colloid-mediated transport is to be understood. This paper describes the collection, concentration and characterization of colloidal materials in the Mississippi River. Colloid concentrations, particle-size distributions, mineral composition and electrophoretic mobilities were determined. Techniques used are illustrated with samples collected at St. Louis, Missouri, U.S.A.

Journal of Contaminant Hydrology↗

USGS2002

Influences of herbivory and water on willow in elk winter range

Elimination of large predators and reduced hunter harvest have led to concerns that an increasing elk ( Cervus elaphus ) population may be adversely affecting vegetation on the low-elevation elk winter range of Rocky Mountain National Park, Colorado, USA. Beaver ( Castor canadensis ) and their impoundments also have declined dramatically (94%) in the same area over the past 50 years coincident with a 20% decline in willow ( Salix spp.) cover. From 1994 to 1998, we studied vegetation production responses of willow communities to elk herbivory and water availability. We estimated willow production by measuring current annual growth of shrubs in 9.3-m2 circular plots, and we measured herbaceous production by clipping vegetation within 0.25-m2 circular plots. Elk herbivory suppressed willow heights, leader lengths, annual production, and herbaceous productivity of willow communities. Water impoundment had a positive effect on herbaceous plant production, but little effect on shrubs, possibly because water tables were naturally high on the study sites even without beaver dams. Nevertheless, the winter range environment previously included more riparian willow habitat because of more stream area (47-69%) due to larger beaver populations. Elk herbivory appears to be the dominant force determining vegetation productivity in willow sites, but the effects may be exacerbated by lowered water tables. Fewer elk or protection from browsing, and water enhancement for <10 years along with management to encourage elk movement away from willow communities, could possibly work as strategies to reestablish sustainable willow communities.

Colorado↗

USGS2008

Sensitivity of summer climate to anthropogenic land-cover change over the Greater Phoenix, AZ, region

This work evaluates the first-order effect of land-use/land-cover change (LULCC) on the summer climate of one of the nation's most rapidly expanding metropolitan complexes, the Greater Phoenix, AZ, region. High-resolution-2-km grid spacing-Regional Atmospheric Modeling System (RAMS) simulations of three "wet" and three "dry" summers were carried out for two different land-cover reconstructions for the region: a circa 1992 representation based on satellite observations, and a hypothetical land-cover scenario where the anthropogenic landscape of irrigated agriculture and urban pixels was replaced with current semi-natural vegetation. Model output is evaluated with respect to observed air temperature, dew point, and precipitation. Our results suggest that development of extensive irrigated agriculture adjacent to the urban area has dampened any regional-mean warming due to urbanization. Consistent with previous observationally based work, LULCC produces a systematic increase in precipitation to the north and east of the city, though only under dry conditions. This is due to a change in background atmospheric stability resulting from the advection of both warmth from the urban core and moisture from the irrigated area. ?? 2008 Elsevier Ltd. All rights reserved.

Journal of Arid Environments↗

USGS2007

Analysis of Alaskan burn severity patterns using remotely sensed data

Wildland fire is the dominant large-scale disturbance mechanism in the Alaskan boreal forest, and it strongly influences forest structure and function. In this research, patterns of burn severity in the Alaskan boreal forest are characterised using 24 fires. First, the relationship between burn severity and area burned is quantified using a linear regression. Second, the spatial correlation of burn severity as a function of topography is modelled using a variogram analysis. Finally, the relationship between vegetation type and spatial patterns of burn severity is quantified using linear models where variograms account for spatial correlation. These results show that: 1) average burn severity increases with the natural logarithm of the area of the wildfire, 2) burn severity is more variable in topographically complex landscapes than in flat landscapes, and 3) there is a significant relationship between burn severity and vegetation type in flat landscapes but not in topographically complex landscapes. These results strengthen the argument that differential flammability of vegetation exists in some boreal landscapes of Alaska. Additionally, these results suggest that through feedbacks between vegetation and burn severity, the distribution of forest vegetation through time is likely more stable in flat terrain than it is in areas with more complex topography. ?? IAWF 2007.

International Journal of Wildland Fire↗

USGS1995

Predator-prey relations and competition for food between age-0 lake trout and slimy sculpins in the Apostle Island region of Lake Superior

Slimy sculpins ( Cottus cognatus ) are an important component of the fish community on reefs and adjacent nursery areas of the Great Lakes and overlap spatially with age-0 lake trout ( Salvelinus namaycush ). Important interactions between these fishes are possible during the lake trout's first year of life, which could include predation on each other's eggs and larvae, and competition for food resources. We investigated the diets of age-0 lake trout and slimy sculpins on a lake trout spawning reef (Gull Island Shoal) and adjacent nursery area (near Michigan Island) in the Apostle Island region of western Lake Superior during June through September from 1988 through 1991. Organisms in stomachs of 511 lake trout and 562 sculpins were identified and counted. Of the 11 major food types found in age-0 lake trout stomachs from both areas, Mysis was the dominant food item (mean volume in stomachs = 68%) and occurred in about 3/4 of the fish analyzed. Copepods, cladocerans, chironomid pupae, fish, and Bythotrephes were also common in the diet (frequency of occurrence > 4%). Diets of lake trout were more diverse on the reef than on the nursery area where Mysis dominated the diet. Slimy sculpins were only found in lake trout greater than 50 mm. Mysis was an important food item of slimy sculpins over the reef but not over the nursery area, where Diporeia was by far the most important taxon. A variety ofben-thic invertebrates (Asellus, chironomids, benthic copepods, and snails) comprised the bulk of the sculpin diet over the reef. Sculpins also ate lake trout eggs in November. Based on cluster analysis, diets were most similar over the reef where both consumed Mysis , calanoid copepods and chironomid pupae. Diets diverged over the nursery areas where sculpins were strictly benthic feeders and lake trout maintained their planktonic diet. In Lake Superior, where lake trout recruitment through natural reproduction has become well established, the coexistence of the two species appears amicable. However, in other Great Lakes with higher sculpin to lake trout ratios on a reef, the coexistence of the two species may be a bottleneck for age-0 lake trout survival beginning with egg deposition and ending when age-0 lake trout move off the reef and the two species no longer compete for a common food resource.

Journal of Great Lakes Research↗

USGS2003

Forest pathology in Hawaii

Native Hawaiian forests are characterised by a high degree of endemism, including pathogens as well as their hosts. With the exceptions of koa (Acacia koa Gray), possibly maile (Alyxia oliviformis Gaud.), and, in the past, sandalwood (Santalum spp.), forest species are of little commercial value. On the other hand, these forests are immensely important from a cultural, ecological, and evolutionary standpoint. Forest disease research was lacking during the mid-twentieth century, but increased markedly with the recognition of ohia (Metrosideros polymorpha Gaud.) decline in the 1970s. Because many pathogens are themselves endemic, or are assumed to be, having evolved with their hosts, research emphasis in natural areas is on understanding host-parasite interactions and evolutionary influences, rather than disease control. Aside from management of native forests, attempts at establishing a commercial forest industry have included importation of several species of pine, Araucaria, and Eucalyptus as timber crops, and of numerous ornamentals. Diseases of these species have been introduced with their hosts. The attacking of native species by introduced pathogens is problematic - for example, Armillaria mellea (Vahl ex Fr.) Que??l. on koa and mamane (Sophora chrysophylla (Salisb.) Seem.). Much work remains to be done in both native and commercial aspects of Hawaiian forest pathology.

New Zealand Journal of Forestry Science↗

USGS2002

To sell or not sell: Assessments of Bangladesh hydrocarbons

A decision by the government of Bangladesh to sell or not sell some of its natural gas reserves to neighboring countries in South Asia will be important in determining the economic future of Bangladesh, a country with an area about equal to Wisconsin. Bangladesh is a country of 150 million people, many of whom live at or below the poverty line. It is situated almost entirely on the great low-lying delta of the Ganges and Brahmaputra River systems. Folded Tertiary strata that form hill tracts in easternmost Bangladesh, adjacent India, and Myanmar provide a little relief above a monotonous deltaic terrain (Fig. 1).

Oil & Gas Journal↗

USGS2016

Proximate influences on female dispersal in white-tailed deer

Ultimate causes of animal dispersal have been hypothesized to benefit the dispersing individual because dispersal reduces competition for local resources, potential for inbreeding, and competition for breeding partners. However, proximate cues influence important features of dispersal behavior, including when dispersal occurs, how long it lasts, and direction, straightness, and distance of the dispersal path. Therefore, proximate cues that affect dispersal influence ecological processes (e.g., population dynamics, disease transmission, gene flow). We captured and radio-marked 277 juvenile female white-tailed deer ( Odocoileus virginianus ), of which 27 dispersed, to evaluate dispersal behavior and to determine proximate cues that may influence dispersal behavior. Female dispersal largely occurred at 1 year of age and coincided with the fawning season. Dispersal paths varied but generally were non-linear and prolonged. Physical landscape features (i.e., roadways, rivers, residential areas) influenced dispersal path direction and where dispersal terminated. Additionally, forays outside of the natal range that did not result in dispersal occurred among 52% of global positioning system (GPS)-collared deer ( n = 25) during the dispersal period. Our results suggest intra-specific social interactions and physical landscape features influence dispersal behavior in female deer. Female dispersal behavior, particularly the lack of directionality, the semi-permeable nature of physical barriers, and the frequency of forays outside of the natal range, should be considered in regard to population management and controlling the spread of disease.

Pennsylvania↗

USGS2018

The flathead catfish invasion of the Great Lakes

A detailed review of historical literature and museum data revealed that flathead catfish were not historically native in the Great Lakes Basin , with the possible exception of a relict population in Lake Erie. The species has invaded Lake Erie, Lake St. Clair, Lake Huron, nearly all drainages in Michigan, and the Fox/Wolf and Milwaukee drainages in Wisconsin. They have not been collected from Lake Superior yet, and the temperature suitability of that lake is questionable. Flathead catfish have been stocked sparingly in the Great Lakes and is not the mechanism responsible for their spread. A stocking in 1968 in Ohio may be one exception to this. Dispersal resulted from both natural range expansions and unauthorized introductions. The invasion is ongoing, with the species invading both from the east and the west to meet in northern Lake Michigan. Much of this invasion has likely taken place since the 1990s. This species has been documented to have significant impacts on native fishes in other areas where it has been introduced; therefore, educating the public not to release them into new waters is important. Frequent monitoring of rivers and lakes for the presence of this species would detect new populations early so that management actions could be utilized on new populations if desired.

Great Lakes↗

USGS2020

Preparing wildlife for climate change: How far have we come?

Global biodiversity is in unprecedented decline and on-the-ground solutions are imperative for conservation. Although there is a large volume of evidence related to climate change effects on wildlife, research on climate adaptation strategies is lagging. To assess the current state of knowledge in climate adaptation, we conducted a comprehensive literature review and evaluated 1,346 peer-reviewed publications for management recommendations designed to address the consequences of climate change on wildlife populations. From 509 publications, we identified 2,306 recommendations and employed both qualitative and quantitative methods for data analysis. Although we found an increase in the volume and diversity of recommendations since 2007, a focus on protected areas (26%, 596 of 2,306 recommendations) and the non-reserve matrix (12%, 276 of 2,306 recommendations) remained prominent in the climate adaptation literature. Common concepts include protected areas, invasive species, ecosystem services, adaptive management, stepping stones, assisted migration, and conservation easements. In contrast, only 1% of recommendations focused on reproduction ( n = 26), survival ( n = 14), disease ( n = 26), or human-wildlife conflict ( n = 24). Few recommendations reflected the potential for local-scale management interventions. We demonstrate limited advancement in preparing natural resource managers in climate adaptation at local, management-relevant scales. Additional research is needed to identify and evaluate climate adaptation strategies aimed at reducing the vulnerability of wildlife to contemporary climate change. © 2020 The Wildlife Society.

Journal of Wildlife Management↗

USGS2022

Do unpublished data help to redraw distributions? The case of the spectacled bear in Peru

Data availability remains a principal factor limiting the use of species distribution models (SDMs) as tools for wildlife conservation and management of rare species. Although data collected in systematic and rigorous fashion are preferable, available data for most species of conservation interest are usually low in both quality and number. Here we show that combining records published in peer-reviewed journals and gray literature sources (e.g., theses, government, and NGO reports) with unpublished records obtained by personal communications from relevant stakeholders affect the predicted distribution of spectacled bears ( Tremarctos ornatus ) in Peru. We built SDMs using generalized linear models, random forest, and Maxent, first using a dataset that only included published records, and second with a dataset using both published and unpublished records. All models were replicated ten times with random subsets with controlled sample size. Models that combined published and unpublished spectacled bear records had a better performance, irrespective of with SDM method used, increasing the connectivity of the species’ range, and increasing the overall predicted distribution area than models that only included published records. This was because unpublished records added key new localities, reducing spatial sampling biases. Our study shows that the inclusion of commonly disregarded data such as opportunistic records, reports from natural park rangers, student theses, and data-deficient small studies can make an important contribution to the overall ecological knowledge of rare and difficult-to-study species such as the spectacled bear.

Mammal Research↗

USGS1997

Sequence variation of the glycoprotein gene identifies three distinct lineages within field isolates of viral hemorrhagic septicemia virus, a fish rhabdovirus

To evaluate the genetic diversity of viral haemorrhagic septicaemia virus (VHSV), the sequence of the glycoprotein genes (G) of 11 North American and European isolates were determined. Comparison with the G protein of representative members of the family Rhabdoviridae suggested that VHSV was a different virus species from infectious haemorrhagic necrosis virus (IHNV) and Hirame rhabdovirus (HIRRV). At a higher taxonomic level, VHSV, IHNV and HIRRV formed a group which was genetically closest to the genus Lyssavirus. Compared with each other, the G genes of VHSV displayed a dissimilar overall genetic diversity which correlated with differences in geographical origin. The multiple sequence alignment of the complete G protein, showed that the divergent positions were not uniformly distributed along the sequence. A central region (amino acid position 245-300) accumulated substitutions and appeared to be highly variable. The genetic heterogeneity within a single isolate was high, with an apparent internal mutation frequency of 1.2 x 10(-3) per nucleotide site, attesting the quasispecies nature of the viral population. The phylogeny separated VHSV strains according to the major geographical area of isolation: genotype I for continental Europe, genotype II for the British Isles, and genotype III for North America. Isolates from continental Europe exhibited the highest genetic variability, with sub-groups correlated partially with the serological classification. Neither neutralizing polyclonal sera, nor monoclonal antibodies, were able to discriminate between the genotypes. The overall structure of the phylogenetic tree suggests that VHSV genetic diversity and evolution fit within the model of random change and positive selection operating on quasispecies.

Journal of General Virology↗