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Results for “Limnology and Oceanography - Letters”

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At least 217 records · Page 12Linked to original sources
USGS2014

Dissolved organic carbon concentration controls benthic primary production: results from in situ chambers in north-temperate lakes

We evaluated several potential drivers of primary production by benthic algae (periphyton) in north-temperate lakes. We used continuous dissolved oxygen measurements from in situ benthic chambers to quantify primary production by periphyton at multiple depths across 11 lakes encompassing a broad range of dissolved organic carbon (DOC) and total phosphorous (TP) concentrations. Light-use efficiency (primary production per unit incident light) was inversely related to average light availability (% of surface light) in 7 of the 11 study lakes, indicating that benthic algal assemblages exhibit photoadaptation, likely through physiological or compositional changes. DOC alone explained 86% of the variability in log-transformed whole-lake benthic production rates. TP was not an important driver of benthic production via its effects on nutrient and light availability. This result is contrary to studies in other systems, but may be common in relatively pristine north-temperate lakes. Our simple empirical model may allow for the prediction of whole-lake benthic primary production from easily obtained measurements of DOC concentration.

Limnology and Oceanography↗
USGS2004

A precise method for the analysis of δ18O of dissolved inorganic phosphate in seawater

A method for preparation and analysis of the oxygen isotope composition (δ 18 O) of dissolved inorganic phosphate (DIP) has been developed and preliminary results for water samples from various locations are reported. Phosphate is extracted from seawater samples by coprecipitation with magnesium hydroxide. Phosphate is further purified through a series of precipitations and resin separation and is ultimately converted to silver phosphate. Silver phosphate samples are pyrolitically decomposed to carbon monoxide and analyzed for δ 18 O. Silver phosphate samples weighing 0.7 mg (3.5 µmol oxygen) can be analyzed routinely with an average standard deviation of about 0.3‰. There is no isotope fractionation during extraction and blanks are negligible within analytical error. Reproducibility was determined for both laboratory standards and natural samples by multiple analyses. A comparison between filtered and unfiltered natural seawater samples was also conducted and no appreciable difference was observed for the samples tested. The δ 18 O values of DIP in seawater determined using this method range from 18.6‰ to 22.3‰, suggesting small but detectable natural variability in seawater. For the San Francisco Bay estuary DIP δ 18 O is more variable, ranging from 11.4‰ near the San Joaquin River to 20.1‰ near the Golden Gate Bridge, and was well correlated with salinity, phosphate concentration, and δ 18 O of water.

California↗
USGS2005

Integrating seepage heterogeneity with the use of ganged seepage meters

The usefulness of standard half-barrel seepage meters for measurement of fluxes between groundwater, and surface water is limited by the small bed area that each measurement represents and the relatively large associated labor costs. Standard half-barrel cylinders were ganged together to allow one measurement of the summed seepage through all of the meters, reducing labor cost and increasing the representative area of measurement. Comparisons of ganged versus individual-meter measurements at two lakes, under both inseepage and outseepage conditions, indicate little loss of efficiency resulting from routing seepage water through the ganging system. Differences between summed and ganged seepage rates were not significant for all but the fastest rates of seepage. At flow rates greater than about 250 mL min −1 , ganged values were as low as 80% of summed values. Gangedmeter head losses also were calculated to determine their significance relative to hydraulic-head gradients measured at the field sites. The calculated reduction in hydraulic gradient beneath the seepage meters was significant only for the largest measured seepage rates. A calibration tank was used to determine single-meter and gangedmeter efficiencies compared to known seepage rates. Single-cylinder seepage meters required an average correction factor of 1.05 to convert measured to actual values, whereas the ganged measurements made in the tank required a larger correction factor of 1.14. Although manual measurements were used in these tests, the concept of ganging seepage cylinders also would be useful when used in conjunction with automated flowmeters.

Limnology and Oceanography: Methods↗
USGS2007

Toward a transport-based analysis of nutrient spiraling and uptake in streams

Nutrient addition experiments are designed to study the cycling of nutrients in stream ecosystems where hydrologic and nonhydrologic processes determine nutrient fate. Because of the importance of hydrologic processes in stream ecosystems, a conceptual model known as nutrient spiraling is frequently employed. A central part of the nutrient spiraling approach is the determination of uptake length ( S w ), the average distance traveled by dissolved nutrients in the water column before uptake. Although the nutrient spiraling concept has been an invaluable tool in stream ecology, the current practice of estimating uptake length from steady‐state nutrient data using linear regression (called here the “ S w approach”) presents a number of limitations. These limitations are identified by comparing the exponential S w equation with analytical solutions of a stream solute transport model. This comparison indicates that (1) S w is an aggregate measure of uptake that does not distinguish between main channel and storage zone processes, (2) S w is an integrated measure of numerous hydrologic and nonhydrologic processes—this process integration may lead to difficulties in interpretation when comparing estimates of S w , and (3) estimates of uptake velocity and areal uptake rate ( v f and U ) based on S w are not independent of system hydrology. Given these findings, a transport‐based approach to nutrient spiraling is presented for steady‐state and time‐series data sets. The transport‐based approach for time‐series data sets is suggested for future research on nutrient uptake as it provides a number of benefits, including the ability to (1) separately quantify main channel and storage zone uptake, (2) quantify specific hydrologic and nonhydrologic processes using various model parameters (process separation), (3) estimate uptake velocities and areal uptake rates that are independent of hydrologic effects, and (4) use shortterm, non‐plateau nutrient additions such that the effects of regeneration and mineralization are minimized. In summary, the transport‐based, time‐series approach provides a means of estimating traditional measures of nutrient uptake ( S w , v f , U ) while providing additional information on the location and magnitude of uptake (main channel versus storage zone). Application of the transport‐based approach to time‐series data from Green Creek, Antarctica, indicates that the bulk of nitrate uptake (~74% to 100%) occurred within the main channel where benthic uptake by algal mats is a likely process. Substantial uptake (~26%) also occurred in the storage zone of one reach, where uptake is attributed to the microbial community.

Limnology and Oceanography: Methods↗
USGS2009

A simple technique for continuous measurement of time-variable gas transfer in surface waters

Mass balance models of dissolved gases in streams, lakes, and rivers serve as the basis for estimating wholeecosystem rates for various biogeochemical processes. Rates of gas exchange between water and the atmosphere are important and error-prone components of these models. Here we present a simple and efficient modification of the SF6 gas tracer approach that can be used concurrently while collecting other dissolved gas samples for dissolved gas mass balance studies in streams. It consists of continuously metering SF6-saturated water directly into the stream at a low rate of flow. This approach has advantages over pulse injection of aqueous solutions or bubbling large amounts of SF6 into the stream. By adding the SF6 as a saturated solution, we minimize the possibility that other dissolved gas measurements are affected by sparging and/or bubble injecta. Because the SF6 is added continuously we have a record of changing gas transfer velocity (GTV) that is contemporaneous with the sampling of other nonconservative ambient dissolved gases. Over a single diel period, a 30% variation in GTV was observed in a second-order stream (Sugar Creek, Indiana, USA). The changing GTV could be attributed in part to changes in temperature and windspeed that occurred on hourly to diel timescales.

Limnology and Oceanography: Methods↗
USGS2009

Detection and characterization of benthic filamentous algal stands ( Cladophora sp.) on rocky substrata using a high-frequency echosounder

A high-frequency echosounder was used to detect and characterize percent cover and stand height of the benthic filamentous green alga Cladophora sp. on rocky substratum of the Laurentian Great Lakes. Comparisons between in situ observations and estimates of the algal stand characteristics (percent cover, stand height) derived from the acoustic data show good agreement for algal stands that exceeded the height threshold for detection by acoustics (~7.5 cm). Backscatter intensity and volume scattering strength were unable to provide any predictive power for estimating algal biomass. A comparative analysis between the only current commercial software (EcoSAV™) and an alternate method using a graphical user interface (GUI) written in MATLAB® confirmed previous findings that EcoSAV functions poorly in conditions where the substrate is uneven and bottom depth changes rapidly. The GUI method uses a signal processing algorithm similar to that of EcoSAV but bases bottom depth classification and algal stand height classification on adjustable thresholds that can be visualized by a trained analyst. This study documents the successful characterization of nuisance quantities of filamentous algae on hard substrate using an acoustic system and demonstrates the potential to significantly increase the efficiency of collecting information on the distribution of nuisance macroalgae. This study also highlights the need for further development of more flexible classification algorithms that can be used in a variety of aquatic ecosystems.

Great Lakes↗
USGS2011

An inexpensive instrument for measuring wave exposure and water velocity

Ocean waves drive a wide variety of nearshore physical processes, structuring entire ecosystems through their direct and indirect effects on the settlement, behavior, and survivorship of marine organisms. However, wave exposure remains difficult and expensive to measure. Here, we report on an inexpensive and easily constructed instrument for measuring wave-induced water velocities. The underwater relative swell kinetics instrument (URSKI) is a subsurface float tethered by a short (<1 m) line to the seafloor. Contained within the float is an accelerometer that records the tilt of the float in response to passing waves. During two field trials totaling 358 h, we confirmed the accuracy and precision of URSKI measurements through comparison to velocities measured by an in situ acoustic Doppler velocimeter and those predicted by a standard swell model, and we evaluated how the dimensions of the devices, its buoyancy, and sampling frequency can be modified for use in a variety of environments.

Limnology and Oceanography: Methods↗
USGS2012

Seeing the light: the effects of particles, dissolved materials, and temperature on in situ measurements of DOM fluorescence in rivers and streams

Field-deployable sensors designed to continuously measure the fluorescence of colored dissolved organic matter (FDOM) in situ are of growing interest. However, the ability to make FDOM measurements that are comparable across sites and over time requires a clear understanding of how instrument characteristics and environmental conditions affect the measurements. In particular, the effects of water temperature and light attenuation by both colored dissolved material and suspended particles may be significant in settings such as rivers and streams. Using natural standard reference materials, we characterized the performance of four commercially-available FDOM sensors under controlled laboratory conditions over ranges of temperature, dissolved organic matter (DOM) concentrations, and turbidity that spanned typical environmental ranges. We also examined field data from several major rivers to assess how often attenuation artifacts or temperature effects might be important. We found that raw (uncorrected) FDOM values were strongly affected by the light attenuation that results from dissolved substances and suspended particles as well as by water temperature. Observed effects of light attenuation and temperature agreed well with theory. Our results show that correction of measured FDOM values to account for these effects is necessary and feasible over much of the range of temperature, DOM concentration, and turbidity commonly encountered in surface waters. In most cases, collecting high-quality FDOM measurements that are comparable through time and between sites will require concurrent measurements of temperature and turbidity, and periodic discrete sample collection for laboratory measurement of DOM.

Limnology and Oceanography: Methods↗
USGS2012

Automated measurement of diatom size

Size analysis of diatom populations has not been widely considered, but it is a potentially powerful tool for understanding diatom life histories, population dynamics, and phylogenetic relationships. However, measuring cell dimensions on a light microscope is a time-consuming process. An alternative technique has been developed using digital flow cytometry on a FlowCAM&reg; (Fluid Imaging Technologies) to capture hundreds, or even thousands, of images of a chosen taxon from a single sample in a matter of minutes. Up to 30 morphological measures may be quantified through post-processing of the high resolution images. We evaluated FlowCAM size measurements, comparing them against measurements from a light microscope. We found good agreement between measurement of apical cell length in species with elongated, straight valves, including small Achnanthidium minutissimum (11-21 &micro;m) and large Didymosphenia geminata (87&ndash;137 &micro;m) forms. However, a taxon with curved cells, Hannaea baicalensis (37&ndash;96 &micro;m), showed differences of ~ 4 &micro;m between the two methods. Discrepancies appear to be influenced by the choice of feret or geodesic measurement for asymmetric cells. We describe the operating conditions necessary for analysis of size distributions and present suggestions for optimal instrument conditions for size analysis of diatom samples using the FlowCAM. The increased speed of data acquisition through use of imaging flow cytometers like the FlowCAM is an essential step for advancing studies of diatom populations.

Limnology and Oceanography: Methods↗
USGS2014

Improving the precision of lake ecosystem metabolism estimates by identifying predictors of model uncertainty

Diel changes in dissolved oxygen are often used to estimate gross primary production (GPP) and ecosystem respiration (ER) in aquatic ecosystems. Despite the widespread use of this approach to understand ecosystem metabolism, we are only beginning to understand the degree and underlying causes of uncertainty for metabolism model parameter estimates. Here, we present a novel approach to improve the precision and accuracy of ecosystem metabolism estimates by identifying physical metrics that indicate when metabolism estimates are highly uncertain. Using datasets from seventeen instrumented GLEON (Global Lake Ecological Observatory Network) lakes, we discovered that many physical characteristics correlated with uncertainty, including PAR (photosynthetically active radiation, 400-700 nm), daily variance in Schmidt stability, and wind speed. Low PAR was a consistent predictor of high variance in GPP model parameters, but also corresponded with low ER model parameter variance. We identified a threshold (30% of clear sky PAR) below which GPP parameter variance increased rapidly and was significantly greater in nearly all lakes compared with variance on days with PAR levels above this threshold. The relationship between daily variance in Schmidt stability and GPP model parameter variance depended on trophic status, whereas daily variance in Schmidt stability was consistently positively related to ER model parameter variance. Wind speeds in the range of ~0.8-3 m s–1 were consistent predictors of high variance for both GPP and ER model parameters, with greater uncertainty in eutrophic lakes. Our findings can be used to reduce ecosystem metabolism model parameter uncertainty and identify potential sources of that uncertainty.

Limnology and Oceanography: Methods↗
USGS2014

Autonomous bed-sediment imaging-systems for revealing temporal variability of grain size

We describe a remotely operated video microscope system, designed to provide high-resolution images of seabed sediments. Two versions were developed, which differ in how they raise the camera from the seabed. The first used hydraulics and the second used the energy associated with wave orbital motion. Images were analyzed using automated frequency-domain methods, which following a rigorous partially supervised quality control procedure, yielded estimates to within 20% of the true size as determined by on-screen manual measurements of grains. Long-term grain-size variability at a sandy inner shelf site offshore of Santa Cruz, California, USA, was investigated using the hydraulic system. Eighteen months of high frequency (min to h), high-resolution (μm) images were collected, and grain size distributions compiled. The data constitutes the longest known high-frequency record of seabed-grain size at this sample frequency, at any location. Short-term grain-size variability of sand in an energetic surf zone at Praa Sands, Cornwall, UK was investigated using the ‘wave-powered’ system. The data are the first high-frequency record of grain size at a single location of a highly mobile and evolving bed in a natural surf zone. Using this technology, it is now possible to measure bed-sediment-grain size at a time-scale comparable with flow conditions. Results suggest models of sediment transport at sandy, wave-dominated, nearshore locations should allow for substantial changes in grain-size distribution over time-scales as short as a few hours.

California↗
USGS2014

A simple headspace equilibration method for measuring dissolved methane

Dissolved methane concentrations in the ocean are close to equilibrium with the atmosphere. Because methane is only sparingly soluble in seawater, measuring it without contamination is challenging for samples collected and processed in the presence of air. Several methods for analyzing dissolved methane are described in the literature, yet none has conducted a thorough assessment of the method yield, contamination issues during collection, transport and storage, and the effect of temperature changes and preservative. Previous extraction methods transfer methane from water to gas by either a "sparge and trap" or a "headspace equilibration" technique. The gas is then analyzed for methane by gas chromatography. Here, we revisit the headspace equilibration technique and describe a simple, inexpensive, and reliable method to measure methane in fresh and seawater, regardless of concentration. Within the range of concentrations typically found in surface seawaters (2-1000 nmol L -1 ), the yield of the method nears 100% of what is expected from solubility calculation following the addition of known amount of methane. In addition to being sensitive (detection limit of 0.1 ppmv, or 0.74 nmol L -1 ), this method requires less than 10 min per sample, and does not use highly toxic chemicals. It can be conducted with minimum materials and does not require the use of a gas chromatograph at the collection site. It can therefore be used in various remote working environments and conditions.

Limnology and Oceanography: Methods↗
USGS1996

Changes in atmospheric circulation patterns affect midcontinent wetlands sensitive to climate

Twenty-seven years of data from midcontinent wetlands indicate that the response of these wetlands to extremes in precipitation-drought and deluge-persists beyond the extreme events. Chemical changes transcend such simple relations as increased salinity during dry periods because drought provides mechanisms for removal of salt by deflation and seepage to groundwater. Inundation of vegetation zones including rooted or floating mats of cattail (Typha glauca) can stimulate sulfate reduction and shift the anion balance from sulfate to bicarbonate dominance. Disruptions in the circulation of moisture-laden air masses over the midcontinent, as in the drought of 1988 and the deluge of 1993, have a major effect on these wetlands, which are representatives of the primary waterfowl breeding habitat of the continent.

Limnology and Oceanography↗
USGS1998

*d13C composition of primary producers and role of detritus in a freshwater coastal ecosystem

Stable-isotope ratio signatures of primary producers in a coastal wetland and in adjacent offshore waters of western Lake Superior indicated that phytoplankton are the primary source of carbon for the grazing food web of this ecosystem. This study outlines the possible roles of other autotrophs in this regard. Isotopic signatures of macrophytes reflected their life-form-associated constraints on diffusion of inorganic carbon. Data indicated that differences between wetland and lake phytoplankton may be explained by the isotopic signatures of their dissolved inorganic carbon (DIC) sources. Results of an in situ experiment showed that respiration associated with macrophyte decomposition is capable of enriching surrounding water with significant amounts of *d13C-depleted DIC and lowering the net *d13C ratio of DIC in water in low-turbulence situations. The *d13C ratio for wetland phytoplankton may be depleted relative to pelagic algae because the fixed carbon is derived from decomposing detritus.

Limnology and Oceanography↗
USGS1999

Multiple stresses from a single agent: Diverse responses to the experimental acidification of Little Rock Lake, Wisconsin

A single stress, acidification with sulfuric acid, was applied to Little Rack Lake in a whole-ecosystem manipulation. We documented a wide range of responses to the acidification, including increases in the concentrations of various chemicals, shifts in microbial processes and a major increase in water clarity to UV-B radiation. Each of these changes could in itself be considered as a separate ecosystem stress that is distinct from the intended manipulation. Acidification in Little Rock Lake was accompanied by a number of substantial changes in the occurrence of organisms. A series of detailed investigations indicates that the mechanisms underlying these organismal changes are varied but cannot usually be tied to the direct effects of acidification. Overall, our results demonstrate how multiple stresses can arise from a single agent operating on an ecosystem and suggest that singly operating stresses may actually be quite rare.

Limnology and Oceanography↗
USGS2009

Modeling lakes and reservoirs in the climate system

Modeling studies examining the effect of lakes on regional and global climate, as well as studies on the influence of climate variability and change on aquatic ecosystems, are surveyed. Fully coupled atmosphere-land surface-lake climate models that could be used for both of these types of study simultaneously do not presently exist, though there are many applications that would benefit from such models. It is argued here that current understanding of physical and biogeochemical processes in freshwater systems is sufficient to begin to construct such models, and a path forward is proposed. The largest impediment to fully representing lakes in the climate system lies in the handling of lakes that are too small to be explicitly resolved by the climate model, and that make up the majority of the lake-covered area at the resolutions currently used by global and regional climate models. Ongoing development within the hydrological sciences community and continual improvements in model resolution should help ameliorate this issue.

Limnology and Oceanography↗