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USGS2010

Trip report: pilot study of factors linking watershed function and coastal ecosystem health in American Samoa

Coral reef resources in the territory of American Samoa face significant problems from overfishing, non-point source pollution, global warming, and continuing population growth and development. The islands are still relatively isolated relative to other parts of the Pacific and have managed to avoid some of the more devastating invasive species that have reached other archipelagoes. As a result, there are opportunities for collaborative and integrative research and monitoring programs to help restore and maintain biodiversity and functioning natural ecosystem in the archipelago. We found that the “Ridge to Reef” paradigm already exists in American Samoa, with a high degree of interagency cooperation and efficient use of limited resources already taking place in the Territory. USGS may be able to make contributions as a partner organization in the Coral Reef Advisory Group (CRAG) through deployment of sediment monitoring instrumentation to supplement stream monitoring by the American Samoa Environmental Protection Agency, by providing high resolution vegetation and land-use maps of main islands, by providing additional support to the American Samoa Department of Marine and Wildlife Resources and the National Park Service for monitoring of invasive species, by working with members of CRAG to initiate sediment transport studies on Samoan reefs, and by developing new projects on the effects of bacterial contamination and pollutants on coral reef physiology and demography.

Open-File Report↗

USGS2009

Emissions from coal fires and their impact on the environment

Self-ignited, naturally occurring coal fires and fires resulting from human activities persist for decades in underground coal mines, coal waste piles, and unmined coal beds. These uncontrolled coal fires occur in all coal-bearing parts of the world (Stracher, 2007) and pose multiple threats to the global environment because they emit greenhouse gases - carbon dioxide (CO 2 ), and methane (CH 4 ) - as well as mercury (Hg), carbon monoxide (CO), and other toxic substances (fig. 1). The contribution of coal fires to the global pool of atmospheric CO 2 is little known but potentially significant. For China, the world's largest coal producer, it is estimated that anywhere between 10 million and 200 million metric tons (Mt) of coal reserves (about 0.5 to 10 percent of production) is consumed annually by coal fires or made inaccessible owing to fires that hinder mining operations (Rosema and others, 1999; Voigt and others, 2004). At this proportion of production, coal amounts lost to coal fires worldwide would be two to three times that for China. Assuming this coal has mercury concentrations similar to those in U.S. coals, a preliminary estimate of annual Hg emissions from coal fires worldwide is comparable in magnitude to the 48 tons of annual Hg emissions from all U.S. coal-fired power-generating stations combined (U.S. Environmental Protection Agency, 2002). In the United States, the combined cost of coal-fire remediation projects, completed, budgeted, or projected by the U.S. Department of the Interior's Office of Surface Mining Reclamation and Enforcement (OSM), exceeds $1 billion, with about 90% of that in two States - Pennsylvania and West Virginia (Office of Surface Mining Enforcement and Reclamation, 2008; fig. 2). Altogether, 15 States have combined cumulative OSM coal-fire project costs exceeding $1 million, with the greatest overall expense occurring in States where underground coal fires are predominant over surface fires, reflecting the greater cost of extinguishing underground fires (fig. 2) (see 'Controlling Coal Fires'). In this fact sheet we review how coal fires occur, how they can be detected by airborne and remote surveys, and, most importantly, the impact coal-fire emissions may have on the environment and human health. In addition, we describe recent efforts by the U.S. Geological Survey (USGS) and collaborators to measure fluxes of CO 2 , CO, CH 4 , and Hg, using groundbased portable detectors, and combining these approaches with airborne thermal imaging and CO 2 measurements. The goal of this research is to develop approaches that can be extrapolated to large fires and to extrapolate results for individual fires in order to estimate the contribution of coal fires as a category of global emissions.

Fact Sheet↗

USGS2023

Early Pliocene (Zanclean) stratigraphic framework for PRISM5/PlioMIP3 time slices

Global reconstructions of Pliocene climate provide important insights into how the climate system operates under elevated temperatures and atmospheric CO2 levels. These reconstructions have been used extensively in paleoclimate modeling experiments for comparison to simulated conditions, and as boundary conditions.Most previous work focused on the Late Pliocene interval known as the mid Piacenzian Warm Period (mPWP), the interval originally identified by the U.S. Geological Survey Pliocene Research, Interpretation and Synoptic Mapping Project (PRISM) as the PRISM interval or Mid Pliocene Warm Period. The term Mid Pliocene Warm Period is a misnomer due to changes to the geological time scale, and its use should be discontinued. The Pliocene Model Intercomparison Project (PlioMIP), now in its third phase, is expanding to include a focus on the Early Pliocene (Zanclean). PlioMIP3 experiments will allow comparison of environmental and climatic conditions before and after closure of the Central American Seaway (CAS). PlioMIP3 used the annual insolation pattern at the top of the atmosphere to determine time slices in the Zanclean that have orbital configurations that are most similar to modern. Two have been selected by PlioMIP and adopted by PRISM for inclusion in future studies: PRISM5.1 (4.474 Ma) and PRISM5.2 (4.870 Ma). Here we establish the stratigraphic framework for these Early Pliocene time slices and furnish information to help locate these intervals in proxy records of paleoenvironmental data using oxygen isotope stratigraphy, paleomagnetic stratigraphy, biostratigraphy, and biochronology (calibrated planktic foraminifer and calcareous nannofossil events).

Stratigraphy↗

USGS2012

National assessment of shoreline change: Historical shoreline change in the Hawaiian Islands

Sandy beaches of the United States are some of the most popular tourist and recreational destinations. Coastal property constitutes some of the most valuable real estate in the country. Beaches are an ephemeral environment between water and land with unique and fragile natural ecosystems that have evolved in equilibrium with the ever-changing winds, waves, and water levels. Beachfront lands are the site of intense residential and commercial development even though they are highly vulnerable to several natural hazards, including marine inundation, flooding and drainage problems, effects of storms, sea-level rise, and coastal erosion. Because the U.S. population continues to shift toward the coast where valuable coastal property is vulnerable to erosion, the U.S. Geological Survey (USGS) is conducting a national assessment of coastal change. One aspect of this effort, the National Assessment of Shoreline Change, uses shoreline position as a proxy for coastal change because shoreline position is one of the most commonly monitored indicators of environmental change (for example, Fletcher, 1992; Dolan and others, 1991; Douglas and others, 1998; Galgano and others, 1998). Additionally, the National Research Council (1990) recommended the use of historical shoreline analysis in the absence of a widely accepted model of shoreline change. A principal purpose of the USGS shoreline change research is to develop a common methodology so that shoreline change analyses for the continental U.S., portions of Hawaii, and Alaska can be updated periodically in a consistent and systematic manner. The primary objectives of this study were to (1) develop and implement improved methods of assessing and monitoring shoreline movement, and (2) improve current understanding of the processes controlling shoreline movement. Achieving these ongoing long-term objectives requires research that (1) examines the original sources of shoreline data (for example, maps, air photos, global positioning system (GPS), Light Detection and Ranging (lidar)); (2) evaluates the utility of different shoreline proxies (for example, geomorphic feature, water mark, tidal datum, elevation), including the errors associated with each; (3) investigates bias and potential errors associated with integrating different shoreline proxies from different sources; (4) develops standard, uniform methods of shoreline change analysis; (5) examines the effects of human activities on shoreline movement and rates of change; and (6) investigates alternative mathematical methods for calculating historical rates of change and uncertainties associated with them. This report summarizes historical shoreline changes on the three most densely populated islands of the eight main Hawaiian Islands: Kauai, Oahu, and Maui. The report emphasizes the hazard from “chronic” (decades to centuries) erosion at regional scales and strives to relate this hazard to the body of knowledge regarding coastal geology of Hawaii because of its potential impact on natural resources, the economy, and society. Results are organized by coastal regions (island side) and sub-regions (common littoral characteristics). This report of Hawaii coasts is part of a series of reports that include text summarizing methods, results, and implications of the results. In addition, geographic information system (GIS) data used in the analyses are made available for download (Romine and others, 2012). The rates of shoreline change and products presented in this report are not intended for site-specific analysis of shoreline movement, nor are they intended to replace any official source of shoreline change information identified by local or State government agencies, or other Federal entities that are used for regulatory purposes. Rates of shoreline change presented herein may differ from other published rates, and differences do not necessarily indicate that the other rates are inaccurate. Some discrepancies are to be expected, considering the many possible ways of determining shoreline positions and rates of change, and the inherent uncertainty in calculating these rates. Rates of shoreline change presented in this report represent shoreline movement under past conditions and are not intended for use in predicting future shoreline positions or future rates of shoreline change.

Hawai'i↗

USGS1993

Status of the Landsat thematic mapper and multispectral scanner archive conversion system

The U.S. Geological Survey's EROS Data Center (EDC) manages the National Satellite Land Remote Sensing Data Archive. This archive includes Landsat thematic mapper (TM) multispectral scanner (MSS) data acquired since 1972. The Landsat archive is an important resource to global change research. To ensure long-term availability of Landsat data from the archive, the EDC specified requirements for a Thematic Mapper and Multispectral Scanner Archive Conversion System (TMACS) that would preserve the data by transcribing it to a more durable medium. In addition to media conversion, hardware and software was installed at EDC in July 1992. In December 1992, the EDC began converting Landsat MSS data from high-density, open reel instrumentation tapes to digital cassette tapes. Almost 320,000 MSS images acquired since 1979 and more than 200,000 TM images acquired since 1982 will be converted to the new medium during the next 3 years. During the media conversion process, several high-density tapes have exhibited severe binder degradation. Even though these tapes have been stored in environmentally controlled conditions, hydrolysis has occurred, resulting in "sticky oxide shed". Using a thermostatically controlled oven built at EDC, tape "baking" has been 100 percent successful and actually improves the quality of some images.

Pecora 12 Symposium↗

USGS2016

Nutrients in the nexus

Synthetic nitrogen (N) fertilizer has enabled modern agriculture to greatly improve human nutrition during the twentieth century, but it has also created unintended human health and environmental pollution challenges for the twenty-first century. Averaged globally, about half of the fertilizer-N applied to farms is removed with the crops, while the other half remains in the soil or is lost from farmers’ fields, resulting in water and air pollution. As human population continues to grow and food security improves in the developing world, the dual development goals of producing more nutritious food with low pollution will require both technological and socio-economic innovations in agriculture. Two case studies presented here, one in sub-Saharan Africa and the other in Midwestern United States, demonstrate how management of nutrients, water, and energy is inextricably linked in both small-scale and large-scale food production, and that science-based solutions to improve the efficiency of nutrient use can optimize food production while minimizing pollution. To achieve the needed large increases in nutrient use efficiency, however, technological developments must be accompanied by policies that recognize the complex economic and social factors affecting farmer decision-making and national policy priorities. Farmers need access to affordable nutrient supplies and support information, and the costs of improving efficiencies and avoiding pollution may need to be shared by society through innovative policies. Success will require interdisciplinary partnerships across public and private sectors, including farmers, private sector crop advisors, commodity supply chains, government agencies, university research and extension, and consumers.

Journal of Environmental Studies and Sciences↗

USGS2026

Fisheries sustainability: Perceptions from the ninth World Fisheries Congress

The World Fisheries Congress (WFC) is one of the largest global gatherings of fisheries professionals and scientists. It is held every 4 years with the purpose of sharing ideas and perspectives about new research, emerging issues, scientific breakthroughs, and governance related to fisheries science, industry, conservation, and management. The ninth WFC, held in Seattle (USA) in 2024, focused on fish and fisheries at the food–water–energy nexus and understanding fisheries sustainability from diverse perspectives. Fisheries sustainability is a goal shared globally that faces challenges across spatial scales from the implementation of good governance and accelerating anthropogenic pressures. Leveraging the unique opportunity to gain insights from WFC delegates, this study assesses perceptions of fisheries sustainability from diverse representation across career stage, geographic region, and professional and cultural backgrounds. Survey results show that respondents (i.e., WFC delegates who chose to take the survey) perceived limited progress towards fisheries sustainability, often with a variable and unclear definition of what sustainability entails. Fish were primarily valued from a provisioning resource perspective, with environmental aspects of fisheries management and conservation seen as the area with the most progress and the greatest needs, rather than economic or social dimensions of fisheries.

Fisheries↗

USGS2015

Pharmaceuticals and other contaminants of emerging concern in landfill leachate of the United States

Landfills are commonly the final respository for a heterogeneous mixture of waste from residential, commercial, and industrial sources. The use of landfills as a means of waste disposal will likely increase as the global population increases and nations develop. Thus, landfills receiving such waste have the potential to produce leachate containing numerous organic chemicals including contaminants of emerging concern (CECs) such as pharmaceuticals, personal care products, and hormones. This leachate is often discharged to pathways that lead directly (e.g. groundwater, streams) or indirectly (e.g. wastewater treament plants) to the environment. Limited research, however, has been conducted regarding the characterisation of landfill leachate for CECs. To provide the first national-scale assessment of CECs in landfill leachate across the United States, fresh leachate samples (i.e. prior to onsite treatment) from 19 landfills in 16 states were collected in 2011 and analysed for 202 CECs [1]. The targeted CECs were selected for analysis because they were expected to be persistent in the environment; are used, excreted, or disposed of in substantial quantities; may have human or environmental health effects; or are potential indicators of environmentally relevant classes of chemicals or source materials.

Norman Network Bulletin↗

USGS2019

Fungicides: An overlooked pesticide class?

Fungicides are indispensable to global food security and their use is forecasted to intensify. Fungicides can reach aquatic ecosystems and occur in surface water bodies in agricultural catchments throughout the whole growing season due to their frequent, prophylactic application. However, in comparison to herbicides and insecticides, the exposure to and effects of fungicides have received less attention. We provide an overview of the risk of fungicides to aquatic ecosystems covering fungicide exposure (i.e., environmental fate, exposure modelling, and mitigation measures) as well as direct and indirect effects of fungicides on microorganisms, macrophytes, invertebrates, and vertebrates. We show that fungicides occur widely in aquatic systems, that the accuracy of predicted environmental concentrations is debatable, and that fungicide exposure can be effectively mitigated. We additionally demonstrate that fungicides can be highly toxic to a broad range of organisms and can pose a risk to aquatic biota. Finally, we outline central research gaps that currently challenge our ability to predict fungicide exposure and effects, promising research avenues, and shortcomings of the current environmental risk assessment for fungicides.

Environmental Science & Technology↗

USGS1996

Developing a temporal database of urban development for the Baltimore/Washington region

The U.S. Geological Survey (USGS), the University of Maryland Baltimore County (UMBC), and the U.S. Bureau of the Census are working together as a multiagency, multidisciplinary team in developing a temporal database that documents the growth of the Baltimore-Washington metropolitan region. This database consists of urban development, principal transportation, shoreline, and population density change. The urban development theme, considered a primary data layer in the study of urban land transformation resulting from human impact on the land, is the focus of this paper. The Baltimore-Washington Spatial Dynamics and Human Impacts Study builds on earlier research efforts that mapped urban land use change for the San Francisco Bay area (Acevedo and Bell, 1994; Bell and others, 1995; Kirtland and others, 1994). In developing a temporal database (Acevedo and others, in press), the team participants hope to provide data that can be used to study patterns of urban growth; assess ecological, environmental, and climatic impacts of urban change; and model and predict future urbanization patterns and impacts (Clarke and others, 1996). Both the San Francisco and Baltimore-Washington regions were selected because of the rapid urban growth and resulting impacts on their ecosystems. The Chesapeake Bay region in particular has undergone extensive environmental agitation due to the hydrologic problems that have arisen from the increase in impermeable surfaces and structures, that is buildings and pavement that physically cover the soil. Because of the inability of water to percolate into the ground, little purification occurs by filtration. Water runs over paved surfaces and quickly washes high levels of toxins directly into the water system. Toxins like gasoline, oil, and fertilizer have dramatically affected the local streams, rivers, and the bay. ABSTRACT The U.S. Geological Survey, the University of Maryland Baltimore County, and the U.S. Bureau of the Census are developing a temporal database to study urban development in the Baltimore-Washington region. The primary data layer, the extent of urban or built-up areas, was compiled using a geographic information system and historical maps, remotely sensed data, digital land use data, and census information from a variety of sources. Urban land use change has been documented by the Baltimore-Washington Spatial Dynamics & Human Impact Study Team for the last 200 years. The methods, definitions, and collection criteria used to define urban or built-up areas were developed by a multi-disciplinary team that also ensures consistency in collection techniques and documentation methods for subsequent application in other regions. Animation techniques were used to visualize the database and to document the evolution of the region's urban landscape. The database is an important tool to urban and regional planners, ecologists, and global change researchers for measuring trends in urban sprawl, analyzing patterns of water pollution, understanding the impacts of development on ecosystems, and developing predictive modeling techniques to better forecast areas of urban growth. This paper describes the techniques used to map the extent of urban areas for Phase I and does not discuss Phase II in detail because the work is still in progress. In this study, urban development is defined as areas of intensive use, with much of the land covered by structures. The built-up areas are characterized by the existence of a systematic street pattern, and the relative concentration of buildings and associated intensive use areas, such as parking lots. Using this definition, urban development does not refer to political boundaries and may include incorporated or unincorporated areas as well as military reservations. ABSTRACT The U.S. Geological Survey, the University of Maryland Baltimore County, and the U.S. Bureau of the Census are developing a temporal database to study urban development in the Baltimore-Washington region. The primary data layer, the extent of urban or built-up areas, was compiled using a geographic information system and historical maps, remotely sensed data, digital land use data, and census information from a variety of sources. Urban land use change has been documented by the Baltimore-Washington Spatial Dynamics & Human Impact Study Team for the last 200 years. The methods, definitions, and collection criteria used to define urban or built-up areas were developed by a multi-disciplinary team that also ensures consistency in collection techniques and documentation methods for subsequent application in other regions. Animation techniques were used to visualize the database and to document the evolution of the region's urban landscape. The database is an important tool to urban and regional planners, ecologists, and global change researchers for measuring trends in urban sprawl, analyzing patterns of water pollution, understanding the impacts of development on ecosystems, and developing predictive modeling techniques to better forecast areas of urban growth. To build the urban component of the temporal database, a multidisciplinary team was assembled and a phased approach initiated. Expanding on procedures developed for the San Francisco Regional Study (Bell and others, 1995), the team developed data definitions, a classification scheme, compilation criteria, mapping specifications, guidelines for source materials, and metadata specifications to support development of a logically consistent dataset. Extensive documentation procedures were established to ensure consistency in data collection, and for subsequent application to other regions. Phase II was the implementation of the regional mapping effort. ABSTRACT The U.S. Geological Survey, the University of Maryland Baltimore County, and the U.S. Bureau of the Census are developing a temporal database to study urban development in the Baltimore-Washington region. The primary data layer, the extent of urban or built-up areas, was compiled using a geographic information system and historical maps, remotely sensed data, digital land use data, and census information from a variety of sources. Urban land use change has been documented by the Baltimore-Washington Spatial Dynamics & Human Impact Study Team for the last 200 years. The methods, definitions, and collection criteria used to define urban or built-up areas were developed by a multi-disciplinary team that also ensures consistency in collection techniques and documentation methods for subsequent application in other regions. Animation techniques were used to visualize the database and to document the evolution of the region's urban landscape. The database is an important tool to urban and regional planners, ecologists, and global change researchers for measuring trends in urban sprawl, analyzing patterns of water pollution, understanding the impacts of development on ecosystems, and developing predictive modeling techniques to better forecast areas of urban growth. The study area for Phase I consisted of an approximate area of 15- by 15-minute segment centered around the city of Baltimore (fig. 1). Phase I was used as a prototype for the technique development and integration that the multiagency collaborative effort would require. The regional study, Phase II, encompassed a 2-degree square centered on Washington, D.C. With more than 7 million people spread across 39 counties, the Baltimore-Washington region is one the Nation's fastest growing metropolitan areas. The two cities are rapidly merging into one.

Maryland↗

USGS2013

The conservation status of the world’s reptiles

Effective and targeted conservation action requires detailed information about species, their distribution, systematics and ecology as well as the distribution of threat processes which affect them. Knowledge of reptilian diversity remains surprisingly disparate, and innovative means of gaining rapid insight into the status of reptiles are needed in order to highlight urgent conservation cases and inform environmental policy with appropriate biodiversity information in a timely manner. We present the first ever global analysis of extinction risk in reptiles, based on a random representative sample of 1500 species (16% of all currently known species). To our knowledge, our results provide the first analysis of the global conservation status and distribution patterns of reptiles and the threats affecting them, highlighting conservation priorities and knowledge gaps which need to be addressed urgently to ensure the continued survival of the world’s reptiles. Nearly one in five reptilian species are threatened with extinction, with another one in five species classed as Data Deficient. The proportion of threatened reptile species is highest in freshwater environments, tropical regions and on oceanic islands, while data deficiency was highest in tropical areas, such as Central Africa and Southeast Asia, and among fossorial reptiles. Our results emphasise the need for research attention to be focussed on tropical areas which are experiencing the most dramatic rates of habitat loss, on fossorial reptiles for which there is a chronic lack of data, and on certain taxa such as snakes for which extinction risk may currently be underestimated due to lack of population information. Conservation actions specifically need to mitigate the effects of human-induced habitat loss and harvesting, which are the predominant threats to reptiles.

Biological Conservation↗

USGS2016

Predictability of horizontal water vapor transport relative to precipitation: Enhancing situational awareness for forecasting western U.S. extreme precipitation and flooding

The western United States is vulnerable to socioeconomic disruption due to extreme winter precipitation and floods. Traditionally, forecasts of precipitation and river discharge provide the basis for preparations. Herein we show that earlier event awareness may be possible through use of horizontal water vapor transport (integrated vapor transport (IVT)) forecasts. Applying the potential predictability concept to the National Centers for Environmental Prediction global ensemble reforecasts, across 31 winters, IVT is found to be more predictable than precipitation. IVT ensemble forecasts with the smallest spreads (least forecast uncertainty) are associated with initiation states with anomalously high geopotential heights south of Alaska, a setup conducive for anticyclonic conditions and weak IVT into the western United States. IVT ensemble forecasts with the greatest spreads (most forecast uncertainty) have initiation states with anomalously low geopotential heights south of Alaska and correspond to atmospheric rivers. The greater IVT predictability could provide warnings of impending storminess with additional lead times for hydrometeorological applications.

Geophysical Research Letters↗

USGS2023

Multi-level thresholds of residential and agricultural land use for elk avoidance across the Greater Yellowstone Ecosystem

1. Conversion of land for settlements and agriculture is increasing globally and can influence wildlife space use. However, there is limited research to identify the thresholds of land-use change that incur wildlife avoidance and how these thresh-olds might vary across levels of selection. 2. We evaluated multi-level avoidance thresholds of elk Cervus canadensis impacted by residential development and irrigated agriculture across the Greater Yellowstone Ecosystem in Idaho, Montana and Wyoming. Using GPS data from765 elk in 21 herds, we estimated habitat selection in relation to development and agriculture at three levels (home range selection, within home range selection and movement path selection). Next, using individual selection covariates and as-sociated measures of land-use availability, we used functional-response models to evaluate how selection varied based on availability, and in turn, to estimate avoidance thresholds. 3. We found individual and level-specific variation in elk responses to environmental factors. Elk exhibited stronger responses (either selection or avoidance) when selecting home range locations (i.e. second-order selection) than when selecting areas within home ranges (i.e. third-order selection) or selecting movement paths (i.e. fourth-order selection). Importantly, elk avoidance of development and agriculture changed as the amount of land in these categories changed. Across all levels of selection elk exhibited neutral selection for human development at low levels of availability (<1.1%–2.2% developed) but avoided areas that were >1.1%–2.2% developed. Conversely, elk selected positively for irrigated agriculture at low to moderate levels of availability (<52.0%–66.2% agriculture) but exhibited neutral selection in areas that were >52.0%–66.2% agriculture. 4. Synthesis and applications . Elk avoidance of low levels of human development suggests conservation efforts such as restrictions on future development or conservation easements could focus on areas that are still below 2% developed. Additionally, because elk selection was strongest at the landscape scale, conservation actions that are based on information about the overall landscape structure may be most impactful. Our results highlight the importance of under-standing variability in wildlife habitat selection at multiple levels, particularly in relation to land-use change, and highlight how functional response modelling can help inform landscape conservation.

Montana, Wyoming↗

USGS2023

Documenting Arctic sea ice dynamics with Global Fiducials Program imagery

For more than 25 years, the U.S. Geological Survey (USGS) has used the remote-sensing capabilities of United States National Imagery Systems (USNIS) to obtain high-resolution electro-optical imagery to monitor Earth’s response to global environmental change. A major focus has been monitoring sea ice behavior in the Arctic Ocean and its marginal seas. In 1997 and 1998, under the direction of the Global Fiducials Program (GFP), USNIS imagery was collected during the Surface Heat Budget of the Arctic Ocean (SHEBA) Project. In 1999, collection of USNIS imagery of six static sea ice sites in the Arctic Ocean and its marginal seas began, and the imagery was archived in the USGS-hosted Global Fiducials Library (GFL). The static sites were imaged through 2014, creating time series of geographically referenced images which scientists have used to study seasonal changes in Arctic ice over the same locations for extended time periods. In early 2009, the Central Intelligence Agency’s MEDEA Program requested that the USGS use USNIS imagery to track movements of sea ice floes during an entire Arctic summer (April through September). The goal was to improve researchers’ understanding of seasonal changes in Arctic sea ice. In order to track and repeatedly capture imagery of the same ice as it drifted across the Arctic Ocean, the USGS developed a methodology and a series of protocols to use data from telemetering drift buoys deployed at locations across the Arctic Ocean by the International Arctic Buoy Programme (IABP) to track the drift of targeted ice masses for periods that exceeded a year. Resulting time series of sea ice imagery, captured while monitoring 38 individual buoys, were archived in the GFL. In 2013 and 2014, in support of the Seasonal Ice Zone Reconnaissance Surveys (SIZRS) Program led by the University of Washington, Seattle, Washington, the USGS requested the collection of USNIS imagery of selected sites in the Beaufort and Chukchi Seas located at every degree of latitude between 70º and 80º N. along a north-south transect. This was done to track and understand the interplay among the ice, atmosphere, and ocean and what it contributes to the rapid decline in summer ice extent that has occurred in recent years. Under the auspices of the GFP, thousands of sea ice images have been collected. Many of those that pass a quality and cloud-cover screening are archived in the GFL. Of these, more than 1,750 sea ice images have been publicly released, following an editing and processing procedure that produces high-resolution degraded images, known as “literal imagery-derived products” or LIDPs. These LIDPs have been approved for free, unrestricted public distribution and scientific analysis. The LIDPs can be downloaded from the USGS Global Fiducials Library Data Access Portal (USGS GFLDAP) at https://www.usgs.gov/global-fiducials-library-data-access-portal . In addition, nonliteral imagery-derived products (nonliteral IDPs), such as metadata, maps, charts, and graphs, have also been released.

Open-File Report↗

USGS2016

Review and synthesis: Changing permafrost in a warming world and feedbacks to the Earth System

The permafrost component of the cryosphere is changing dramatically, but the permafrost region is not well monitored and the consequences of change are not well understood. Changing permafrost interacts with ecosystems and climate on various spatial and temporal scales. The feedbacks resulting from these interactions range from local impacts on topography, hydrology, and biology to complex influences on global scale biogeochemical cycling. This review contributes to this focus issue by synthesizing its 28 multidisciplinary studies which provide field evidence, remote sensing observations, and modeling results on various scales. We synthesize study results from a diverse range of permafrost landscapes and ecosystems by reporting key observations and modeling outcomes for permafrost thaw dynamics, identifying feedbacks between permafrost and ecosystem processes, and highlighting biogeochemical feedbacks from permafrost thaw. We complete our synthesis by discussing the progress made, stressing remaining challenges and knowledge gaps, and providing an outlook on future needs and research opportunities in the study of permafrost–ecosystem–climate interactions.

Environmental Research Letters↗

USGS2019

A General Lake Model (GLM 3.0) for linking with high-frequency sensor data from the Global Lake Ecological Observatory Network (GLEON)

The General Lake Model (GLM) is a one-dimensional open-source code designed to simulate the hydrodynamics of lakes, reservoirs, and wetlands. GLM was developed to support the science needs of the Global Lake Ecological Observatory Network (GLEON), a network of researchers using sensors to understand lake functioning and address questions about how lakes around the world respond to climate and land use change. The scale and diversity of lake types, locations, and sizes, and the expanding observational datasets created the need for a robust community model of lake dynamics with sufficient flexibility to accommodate a range of scientific and management questions relevant to the GLEON community. This paper summarizes the scientific basis and numerical implementation of the model algorithms, including details of sub-models that simulate surface heat exchange and ice cover dynamics, vertical mixing, and inflow–outflow dynamics. We demonstrate the suitability of the model for different lake types that vary substantially in their morphology, hydrology, and climatic conditions. GLM supports a dynamic coupling with biogeochemical and ecological modelling libraries for integrated simulations of water quality and ecosystem health, and options for integration with other environmental models are outlined. Finally, we discuss utilities for the analysis of model outputs and uncertainty assessments, model operation within a distributed cloud-computing environment, and as a tool to support the learning of network participants.

Geoscientific Model Development↗

USGS2015

Moving environmental DNA methods from concept to practice for monitoring aquatic macroorganisms

The discovery that macroorganisms can be detected from their environmental DNA (eDNA) in aquatic systems has immense potential for the conservation of biological diversity. This special issue contains 11 papers that review and advance the field of eDNA detection of vertebrates and other macroorganisms, including studies of eDNA production, transport, and degradation; sample collection and processing to maximize detection rates; and applications of eDNA for conservation using citizen scientists. This body of work is an important contribution to the ongoing efforts to take eDNA detection of macroorganisms from technical breakthrough to established, reliable method that can be used in survey, monitoring, and research applications worldwide. While the rapid advances in this field are remarkable, important challenges remain, including consensus on best practices for collection and analysis, understanding of eDNA diffusion and transport, and avoidance of inhibition in sample collection and processing. Nonetheless, as demonstrated in this special issue, eDNA techniques for research and monitoring are beginning to realize their potential for contributing to the conservation of biodiversity globally.

Biological Conservation↗

USGS2020

Storm impacts on phytoplankton community dynamics in lakes

In many regions across the globe, extreme weather events such as storms have increased in frequency, intensity, and duration due to climate change. Ecological theory predicts that such extreme events should have large impacts on ecosystem structure and function. High winds and precipitation associated with storms can affect lakes via short‐term runoff events from watersheds and physical mixing of the water column. In addition, lakes connected to rivers and streams will also experience flushing due to high flow rates. Although we have a well‐developed understanding of how wind and precipitation events can alter lake physical processes and some aspects of biogeochemical cycling, our mechanistic understanding of the emergent responses of phytoplankton communities is poor. Here we provide a comprehensive synthesis that identifies how storms interact with lake and watershed attributes and their antecedent conditions to generate changes in lake physical and chemical environments. Such changes can restructure phytoplankton communities and their dynamics, as well as result in altered ecological function (e.g., carbon, nutrient and energy cycling) in the short‐ and long‐term. We summarize the current understanding of storm‐induced phytoplankton dynamics, identify knowledge gaps with a systematic review of the literature, and suggest future research directions across a gradient of lake types and environmental conditions.

Global Change Biology↗