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USGS2022

Postbreeding movements and molting ecology of female gadwalls and mallards

The wing molt is an important annual life-history event that occurs in waterfowl and molt site selection can play an important role in determining survival. We tracked postbreeding movements of gadwall ( Mareca strepera ) and mallard ( Anas platyrhynchos ) females that bred in the Suisun Marsh (Suisun) of California, USA, to determine molt site selection and wing molt chronology. We attached backpack transmitters with global positioning system and global system for mobile communications (GPS-GSM) technology to female gadwalls and mallards within Suisun and tracked the birds following the breeding season during 2015–2018. We determined molt locations for 52 female gadwalls and 112 female mallards. Thirty of the marked gadwall females selected 2 regions within southern Oregon-northeastern California (SONEC) to undergo molt; 16 molted in the Upper Klamath Basin (southern OR) and 14 in the Lower Klamath Basin (northeastern CA). A large portion of female mallards molted in Suisun ( n = 34) and the Sacramento Valley in California ( n = 31) but also used the Upper Klamath Basin ( n = 13), Lower Klamath Basin ( n = 12), and the Yolo–Delta region in California ( n = 12). On average, gadwalls departed Suisun on 30 July (±17.82 days [SD]), and mallards departed on 24 July (±22.69 days). Mean start date of molt for each species was similar: 27 August (±16.09 days) for gadwalls and 26 August (±21.03 days) for mallards. Molt end date was analogous for each species as well. Molt ended on average 1 October (±15.52 days) for gadwalls and on 5 October (±18.34 days) for mallards. Gadwalls and mallards showed intraspecific differences in average molt start and end date within the 3 main geographical zones: Suisun, Central Valley of California (Central Valley), and SONEC. Mean duration of wing molt for gadwalls was 34.72± 8.62 days and 41.09 ± 12.54 days for mallards. Both species primarily selected permanent marsh to undergo wing molt (gadwalls = 90.4%, mallards = 63.4%). Conservation and active management of these high-use molting areas used by California's primary breeding waterfowl species could enhance postbreeding survival, leading to increased breeding waterfowl populations.

California, Nevada, Oregon↗

USGS2012

Summer-time use of west coast U. S. National Marine Sanctuaries by migrating sooty shearwaters ( Puffinus griseus )

Non-breeding sooty shearwaters are the most abundant seabird in the California Current Large Marine Ecosystem (CCLME) during boreal spring and summer months. This, combined with relatively great energy demands, reliance on patchy, shoaling prey (krill, squid, and forage fishes), and unconstrained mobility free from central-place-foraging demands—make shearwaters useful indicators of ecosystem variability. During 2008 and 2009, we used satellite telemetry to evaluate shearwater ranging patterns throughout the CCLME and specifically within the US Exclusive Economic Zone (EEZ) among birds captured at three locations: Columbia River Plume, WA; Monterey Bay, CA; and Santa Barbara Channel, CA. Shearwaters ranged throughout the entire CCLME from southeast Alaska to southern Baja California, Mexico. Within the EEZ during 2008 and 2009, shearwaters spent 68% and 46% of time over the shelf (<200 m), 27% and 43% of time over the slope (200–1000 m), and 5% and 11% of time over the continental rise and abyssal regions (>1000 m), respectively. In 2008 and 2009, shearwaters spent 22% and 25% of their time in the EEZ within the five west coast National Marine Sanctuaries, respectively; high utilization occurred in non-sanctuary waters of the EEZ. Shearwater utilization distribution (based on the Brownianbridge movement model) among sanctuaries was disproportionate according to sanctuary availability (based on area) within the EEZ. Shearwaters utilized the Monterey Bay sanctuary (2008, 2009) and the Channel Islands sanctuary (2009) disproportionately more than other sanctuaries. Although all five sanctuaries were used by shearwaters, waters outside sanctuary zones appeared significantly more important and likely supported large aggregations of shearwaters. Utilization distributions among individual birds from three discrete capture locations were variable and revealed greater similarity in space-use sharing within capture-location groupings and during 2008 when shearwaters were more aggregated than in 2009. We identified several regional ‘‘habitat hotspot’’ areas, including the Columbia River Plume, Cape Blanco, Monterey Bay, Estero/San Luis Obispo Bays, and the eastern Santa Barbara Channel through the inner Southern California Bight.

California;Washington↗

USGS1979

Dispersal and migratory patterns of San Francisco Bay produced herons, egrets, and terns

San Francisco Bay, California, including its fringing marshes, supports a large and diverse water related avifauna (Grinnell and Wythe 19271 Sibley 1952, Gill 1973, 1977). Certain of man's alterations of the Bay's shallower wetlands have resulted in increased habitat diversity which has allowed colonization by several species of birds including some colonial nesting species. The extensive dikes associated with salt production and some areas of higher ground created by dredge spoils have provided increased tide-free substratum, some of it insular, suitable for nesting. The resulting numbers of Snowy Egrets ( Egretta thula) , Black-crowned Night Herons ( Nycticorax nycticorax ), Forster's Terns ( Sterna forsteri ), and Caspian Terns ( Sterna caspia ) using these areas now represent a significant portion of the northern California breeding populations of these species. In conjunction with a study of the breeding birds of the South San Francisco Bay Estuary (Gill 1973, 1977) from 1971 to 1973, we banded 187 Great Blue Herons ( Ardea herodias ), 1499 Snowy Egrets, 1615 Black-crowned Night Herons, 2943 Forster's Terns, and 743 Caspian Terns; often this represented a substantial portion of these species banded in the western states during these years (Table 1). Recoveries from these bandings through 1977 plus additional recoveries from a few earlier and some more recent bandings provide the data for this report on dispersal patterns and migration of San Francisco Bay produced herons, egrets, and terns.

California↗

USGS2012

Hierarchical distance-sampling models to estimate population size and habitat-specific abundance of an island endemic

Population size and habitat-specific abundance estimates are essential for conservation management. A major impediment to obtaining such estimates is that few statistical models are able to simultaneously account for both spatial variation in abundance and heterogeneity in detection probability, and still be amenable to large-scale applications. The hierarchical distance-sampling model of J. A. Royle, D. K. Dawson, and S. Bates provides a practical solution. Here, we extend this model to estimate habitat-specific abundance and rangewide population size of a bird species of management concern, the Island Scrub-Jay ( Aphelocoma insularis ), which occurs solely on Santa Cruz Island, California, USA. We surveyed 307 randomly selected, 300 m diameter, point locations throughout the 250-km 2 island during October 2008 and April 2009. Population size was estimated to be 2267 (95% CI 1613-3007) and 1705 (1212-2369) during the fall and spring respectively, considerably lower than a previously published but statistically problematic estimate of 12 500. This large discrepancy emphasizes the importance of proper survey design and analysis for obtaining reliable information for management decisions. Jays were most abundant in low-elevation chaparral habitat; the detection function depended primarily on the percent cover of chaparral and forest within count circles. Vegetation change on the island has been dramatic in recent decades, due to release from herbivory following the eradication of feral sheep ( Ovis aries ) from the majority of the island in the mid-1980s. We applied best-fit fall and spring models of habitat-specific jay abundance to a vegetation map from 1985, and estimated the population size of A. insularis was 1400-1500 at that time. The 20-30% increase in the jay population suggests that the species has benefited from the recovery of native vegetation since sheep removal. Nevertheless, this jay's tiny range and small population size make it vulnerable to natural disasters and to habitat alteration related to climate change. Our results demonstrate that hierarchical distance-sampling models hold promise for estimating population size and spatial density variation at large scales. Our statistical methods have been incorporated into the R package unmarked to facilitate their use by animal ecologists, and we provide annotated code in the Supplement.

California↗

USGS1992

Range use and movements of California condors

Between 1982 and 1987, photographic and telemetric tracking of California Condors (Gymnogyps californianus) yielded information on use of the last known range of the species by 23 individual birds. Except for yearlings, most and possibly all individuals in the population used all major foraging zones. Use of the foraging zones was not uniform among individuals, however. Breeding pairs tended to forage most frequently in zones close to their nests (usually within 70 km, occasionally as far away as 180 km). Immatures (at least older immatures), unpaired birds, and paired birds that were not breeding foraged more widely. Male and female adults used the foraging range in a similar manner. Although most portions of the foraging range received some condor use throughout the year, use varied seasonally in accord with recent and historical patterns of food availability. Nesting areas were separated from foraging zones and were visited much less freely than foraging zones. Paired birds tended strongly to visit only their own and immediately adjacent nesting areas. Their nesting areas remained stable over the years. Unpaired adults and immatures ranged more widely among nesting areas. Condors were sometimes documented flying more than 200 km and traversing the entire range of the species during a day. Birds were variably social in movements. Pair members tended to stay together during long-distance travels. Immatures and unpaired birds sometimes traveled with other condors but often moved singly. In years when the population still included many breeders, the largest observed aggregations included one-half to two-thirds of the total population. The comparative strengths and weaknesses of photographic and telemetric methods are described for tracking and other research endeavors.

Condor↗

USGS2011

Winter habitat associations of diurnal raptors in Californias Central Valley

The wintering raptors of California's Central Valley are abundant and diverse. Despite this, little information exists on the habitats used by these birds in winter. We recorded diurnal raptors along 19 roadside survey routes throughout the Central Valley for three consecutive winters between 2007 and 2010. We obtained data sufficient to determine significant positive and negative habitat associations for the White-tailed Kite (Elanus leucurus), Bald Eagle {Haliaeetus leucocephalus), Northern Harrier (Circus cyaneus), Red-tailed Hawk (Buteo jamaicensis), Ferruginous Hawk (Buteo regalis), Rough-legged Hawk (Buteo lagopus), American Kestrel (Falco sparverius), and Prairie Falcon (Falco mexicanus). The Prairie Falcon and Ferruginous and Rough-legged hawks showed expected strong positive associations with grasslands. The Bald Eagle and Northern Harrier were positively associated not only with wetlands but also with rice. The strongest positive association for the White-tailed Kite was with wetlands. The Red-tailed Hawk was positively associated with a variety of habitat types but most strongly with wetlands and rice. The American Kestrel, Northern Harrier, and White-tailed Kite were positively associated with alfalfa. Nearly all species were negatively associated with urbanized landscapes, orchards, and other intensive forms of agriculture. The White-tailed Kite, Northern Harrier, Redtailed Hawk, Ferruginous Hawk, and American Kestrel showed significant negative associations with oak savanna. Given the rapid conversion of the Central Valley to urban and intensive agricultural uses over the past few decades, these results have important implications for conservation of these wintering raptors in this region.

Western Birds↗

USGS1977

California ospreys begin incubation at a frozen mountain lake

No abstract available.

Bird-Banding↗

USGS1972

Copulation by California condors

Koford (Res. Rept. No. 3, Natl. Audubon Soc., 1953) observed sexual display among California Condors ( Gymnogyps californianus ) on more than 30 occasions, yet only once did he see what he thought was copulation. Some of the displays he watched were quite intricate, with considerable posturing and "male" aggression, but no such activity preceded this copulation. The birds sat several feet apart for over 1 hour, then one climbed onto the other's back, staying there 1/2 minute and flapping gently at the apparent moment of coition. Afterward they sat quietly 1/2 hour before flying away. This led Koford to state (p. 79) that "possibly in Gymnogyps copulation is not immediately preceded by display." We have records of 8 California Condor copulations, 5 of which are similar to that described above. The three other occasions began similarly, with the birds sitting quietly, but then the "male" displayed briefly before the "female" with wings half spread and head drooping forward. This elicited no apparent response, but the male immediately walked behind and mounted the female. The apparent moment of coition was accompanied by gentle wing flapping in all instances.

The Auk↗

USGS1989

Brain cholinesterase activity of nestling great egrets, snowy egrets, and black-crowned night-herons

Inhibition of brain cholinesterase (ChE) activity in birds is often used to diagnose exposure or death from organophosphorus or carbmate pesticides. Brain ChE activity in the young of altricial species increase with age; however, this relationship has only been demonstrated in the European starling (Sturnus vulgaris). Brain ChE activity of nestling great egrets (Casmerodius albus) collected from a colony in Texas increased significantly with age and did not differ among individuals from different nests. Brain ChE activity of nestling snowy egrets (Egretta thula) and black-crowned night -herons (Nycticorax nycticorax) collected in one colony each from Rhode Island, Texas, and California also increased significantly with age and did not differ among individuals from different nests or colonies. This study further demonstrates that age must be considered when evaluating exposure of nestling altricial birds to ChE inhibitors.

Journal of Wildlife Diseases↗

USGS2020

Kelp forest monitoring at Naval Base Ventura County, San Nicolas Island, California: Fall 2018 and Spring 2019, fifth annual report

Introduction Kelp forests and rocky reefs are among the most recognized marine ecosystems and provide the primary habitat for several species of fishes, invertebrates, and algal assemblages (Stephens and others, 2006). In addition, kelp forests have been shown to be important carbon dioxide sinks (Wilmers and others, 2012) and are an important source of nearshore marine primary production (Duggins and others, 1989). These highly dynamic ecosystems are extremely variable, and both top-down and bottom-up ecological controls drive this rich trophic environment. Giant kelp ( Macrocystis pyrifera ) forests and the species that inhabit these ecosystems are influenced by several environmental conditions, such as wave exposure, water temperature, water clarity, bottom depth and composition, species composition, and the density of kelp and other algal assemblages (Schiel and Foster, 2015). However, in addition to “normal” variability, kelp forests can undergo extreme regime shifts from kelp canopy forested areas to barrens characterized by high densities of urchins and encrusting coralline algae (Harrold and Reed, 1985). San Nicolas Island (SNI), outermost of the California Channel Islands, is home to a diverse group of terrestrial and marine organisms and includes kelp bed and rocky reef habitats ( fig. 1 ). The SNI kelp forests not only provide food and shelter for fishes and invertebrates within the habitat, but also they support higher trophic level consumers such as marine birds and several marine mammal species including the southern sea otter ( Enhydra lutris nereis) , a major predator on sea urchins and other marine invertebrates. Owing to concern about the vulnerability of the California population, the U.S. Fish and Wildlife Service (USFWS) translocated 140 southern sea otters from the central California coast to SNI between 1987 and 1990. Although only approximately 14 translocated otters are thought to have remained at SNI (U.S. Fish and Wildlife Service, 2012), their population at the island has increased and is currently greater than 120 individuals (Hatfield and others, 2019). Sea otters are a natural part of the kelp forest ecosystem, but their presence has implications for community dynamics as they repopulate a region from which they were extirpated in the 19th century. At SNI, sea otters have been concentrated mostly around the west end of the island, with some use of the south side and very little, but expanding, use of the northeast side. An ecosystem shift from urchin dominated to kelp dominated, that occurred at a site at the west end of the island in the early 2000s, though initiated by sea urchin disease, was likely facilitated to some degree by sea otter foraging (Kenner and Tinker, 2018). These ecosystems also are the target of many fisheries, including urchin and lobster. Urchin fisheries, which target the larger red sea urchin, may release the smaller but more mobile purple sea urchin from competitive control (Dayton and others, 1998). Lobster fisheries may release purple sea urchins from predatory control (Lafferty, 2004). Owing to the distance from the mainland, however, SNI kelp forests and reefs have been somewhat protected from the degree of harvest and other anthropogenic impacts experienced by the southern California mainland. Invasive species are another issue, and there are a few invasive subtidal macroalgae of concern in southern California waters. Although the brown alga Sargassum muticum has been established at the island for decades, S. horneri has only recently been seen at SNI and, so far, the invasive kelp Undaria pinnatifida and the green alga Caulerpa taxifolia have not been observed there. Sargassum horneri , in particular, has demonstrated a capability to outcompete native kelps at some of the other Channel Islands but it is unclear what indirect effects it may have on community structure (Marks and others, 2015). Because the surrounding kelp forests fall within the management boundary of the SNI Integrated Natural Resources Management Plan (INRMP; U.S. Navy, 2015), USGS works with the Navy to provide surveys of this ecologically important ecosystem that inform natural resource managers of trends in the population abundance of particular species. In addition, long-term surveys allow for an understanding of potential changes in species diversity and community composition as a result of trophic or other interactions. The U.S. Geological Survey (USGS) implemented a kelp forest monitoring program for the U.S. Navy at San Nicolas Island in 2014, building on sites and methods established by USFWS scientists in 1980 ( appendix 1 ). This report focuses on data collected during sampling expeditions to these sites in fall 2018 (October 2–5) and spring 2019 (April 3–6). Together they will be herein referred to as year 5 because, although the trips were made in different calendar years, they were approximately 6 months apart and were conducted under the fifth year of this contract. The previous sampling year (fall 2017 and spring 2018) is referred to as year 4. The year 5 data are compared with data collected during eight trips from fall 2014 through spring 2018. Differences in counts between these expeditions can result from seasonal factors, stochastic variation, or sampling error, but temporal comparison can reveal population trends. Where appropriate, long-term data collected during the 33 years prior to the implementation of these slightly revised protocols will be presented in order to lend some context to the observations reported here. Genus and species names used in this report are those currently recognized as valid in the Integrated Taxonomic Information System (ITIS.gov). Upon first use, the name recognized as valid by the World Register of Marine Species (WoRMS; marinespecies.org) is shown in brackets if different. The exception is Sargassum horneri which does not show up in any discernable form in ITIS.gov.

California↗

USGS2025

Revised marine bird collision and displacement vulnerability index for U.S. Pacific Outer Continental Shelf offshore wind energy development

The installation of offshore wind energy infrastructure (OWEI) at sea may affect marine birds by increasing the risk of mortality from collision with OWEI (Collision Vulnerability) and causing disturbance and displacement from important habitats (Displacement Vulnerability). In 2017, we published the first comprehensive database quantifying marine bird Collision Vulnerability and Displacement Vulnerability to potential OWEI in the region of the U.S. Pacific Outer Continental Shelf (POCS; waters within the Exclusive Economic Zone of California, Oregon, and Washington). We have updated this Vulnerability Index with new research and data, additional species present in the POCS, and an evolved understanding of the application and utility of the Index. Of the species assessed, phalaropes and Red-billed Tropicbird have the highest Collision Vulnerability, and gulls, terns, jaegers, skuas, and pelicans have moderately high Collision Vulnerability. Boobies, sea ducks, and pelicans have the greatest Displacement Vulnerability. The overall trends in ranked Vulnerability among marine birds in the POCS were consistent between Version 1 and Version 2 although new data and revised calculations updated the outcomes. Alcids, loons, storm-petrels, Brant, and phalaropes ranked higher for Collision Vulnerability in Version 2 compared to Version 1; sea ducks, cormorants, skua, and jaegers ranked lower for Collision Vulnerability in Version 2 compared to Version 1. Displacement Vulnerability ranks were higher in Version 2 for gulls, pelicans, sea ducks, and alcids and lower for albatrosses, terns, and loons. Vulnerability Index Version 2 is an up-to-date, representative, and transparent assessment of marine bird vulnerability to potential offshore wind energy development. This updated Vulnerability Index can assist resource managers and others in understanding and addressing potential interactions between OWEI and marine bird species that inhabit the POCS.

Data Report↗

USGS2020

Learning from real-world experience to understand renewable energy impacts to wildlife

The project team sought to use real-world data to understand adverse effects to wildlife of renewable energy production that is critical to meeting California’s climate and clean energy goals. The project had three main components. First, a systematic literature review studied 20 peer-reviewed publications and 612 reports from other nonreviewed sources from 231 wind and solar facilities in North America. Within California, 50 percent of facilities collected pre- and post-construction data, 30 percent had experimental study designs, and fewer than 7 percent estimated detection probability during habitat use surveys. Mitigation at wind power plants focused on repowering to reduce risk to soaring birds and at solar facilities emphasized wildlife deterrence and compensatory mitigation. Second, the authors developed a best-practices approach to employ environmental isotopes (for example, hydrogen obtained from animal tissue) and rescaling functions (a statistical approach to modeling the relationship between variables) to assign individual birds or bats to their place of origin. The team applied this approach to feathers from 411 individuals of 12 species killed at wind facilities and 515 individuals of 19 species killed at solar facilities. From 24 percent to 100 percent (mean +/- SD = 49 percent +/- 33 percent) and 25 percent to 100 percent (73 percent +/- 25 percent) of birds grew feathers at a location outside the collection site at wind and solar facilities, respectively. Third, the authors constructed Bayesian integrated population models (probability models) for 29 focal species affected by wind or solar energy generation in California. Species predominantly local in origin generally had lower population growth rates than did species that were predominantly nonlocal in origin. These patterns illustrate the complex linkages between behavioral ecology, vulnerability to mortality, and population-level impacts to wildlife from fatalities at renewable energy facilities. This project benefits the renewable energy sector by providing a framework and specific tools for understanding environmental impacts of renewable energy generation.

California↗

USGS2000

Investigation of denitrification rates in an ammonia-dominated constructed wastewater treatment wetland

Denitrification measurements were made under simulated field conditions using sediment cores and water collected from the Hemet/San Jacinto Multipurpose Demonstration Wetland (Riverside County, California, USA). The 9.9 ha constructed wetland is used to both polish ammonia-dominated secondary municipal effluent and provide migratory bird habitat. The wetland was originally constructed as a marsh-pond-marsh system in 1994. Over the period from January through March 1998, measured denitrification rates averaged 20.9 ± 20.9 μmol N m −2 h −1 within the emergent marsh portions of the wetland and 646 ± 353 μmol N m −2 h −1 in open water areas. The mean areal denitrification removal rate for this period was 0.70 kg N ha −1 d −1 , which accounted for about 8% of the total N removed by the wetland. Internal retention was the main N-removal mechanism. Synoptic water quality surveys indicated that denitrification was limited by a lack of nitrification within the wetland. Between April 1998 and January 1999, the wetland was reconfigured as a hemi-marsh system, having equal areas of interspersed emergent marsh and deep open water. In May 1999, measured denitrification rates averaged 1414 ± 298 μmol N m −2 h −1 within the emergent marsh zones and 682 ± 218 μmol N m −2 h −1 in the open water areas. The mean areal denitrification removal rate was 3.58 kg N ha −1 d −1 , which accounted for 40% of the total N removed by the wetland. A synoptic water quality survey indicated that nitrification within the wetland had been enhanced by the reduction of emergent macrophyte biomass and the increase in the area of interspersed deep open water. The modifications to the wetland shifted the nitrogen balance from a large internal storage component and a small denitrification component in 1998 to a more denitrifying system in 1999.

Wetlands↗

USGS2021

Domoic acid and saxitoxin in seabirds in the United States between 2007 and 2018

As harmful algal blooms (HABs) increase in magnitude and duration worldwide, they are becoming an expanding threat to marine wildlife. Over the past decade, blooms of algae that produce the neurotoxins domoic acid (DA) and saxitoxin (STX) and documented concurrent seabird mortality events have increased bicoastally in the United States. We conducted a retrospective analysis of HAB related mortality events in California, Washington, and Rhode Island between 2007 and 2018 involving 12 species of seabirds, to document the levels, ranges, and patterns of DA and STX in eight sample types (kidney, liver, stomach, intestinal, cloacal, cecal contents, bile, blood) collected from birds during these events. Samples ( n = 182 ) from 83 birds were examined for DA ( n = 135) or STX ( n = 17) or both toxins simultaneously ( n = 30), using ELISA or LCMS at the National Oceanographic and Atmospheric Administration, National Marine Fisheries Service (NOAA-NMFS) Wildlife Algal-toxin Research and Response Network (WARRN-West) or the University of California, Santa Cruz (UCSC). DA or STX was detected in seven of the sample types with STX below the minimum detection limit in blood for the three samples tested. DA was found in 70% and STX was found in 23% of all tested samples. The ranges of detectable levels of DA and STX in all samples were 0.65–681,190.00 ng g −1 and 2.00–20.95 ng g −1 , respectively. Cloacal contents from a Pacific loon ( Gavia pacifica ) collected in 2017 from Ventura County, California, had the highest maximum level of DA for all samples and species tested in this study. The highest level of STX for all samples and species was detected in the bile of a northern fulmar ( Fulmarus glacialis ) collected in 2018 from San Luis Obispo County, California. DA detections were consistently found in gastrointestinal samples, liver, bile, and kidney, whereas STX detections were most frequently seen in liver and bile samples. Co-occurring HAB toxins (DA and STX) were detected in white-winged scoters ( Melanitta deglandi ) in 2009, a Brandt's cormorant ( Phalacrocorax penicillatus ) in 2015, and a northern fulmar and common murre ( Uria aalge ) in 2018. This article provides DA and STX tissue concentrations and patterns in avian samples and shows the utility of various sample types for the detection of HAB toxins. Future research to understand the pharmacodynamics of these toxins in avian species and to establish lethal doses in various bird species would be beneficial.

Harmful Algae↗

USGS2016

California State Waters map series — Offshore of Aptos, California

Introduction In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of high-resolution bathymetry, marine benthic habitats, and geology within California’s State Waters. The CSMP approach is to create highly detailed seafloor maps through collection, integration, interpretation, and visualization of swath sonar bathymetric data (the undersea equivalent of satellite remote-sensing data in terrestrial mapping), acoustic backscatter, seafloor video, seafloor photography, high-resolution seismic-reflection profiles, and bottom-sediment sampling data. The map products display seafloor morphology and character, identify potential marine benthic habitats, and illustrate both the surficial seafloor geology and shallow subsurface geology. The Offshore of Aptos map area is located on the Pacific Coast, on the north side of Monterey Bay, about 105 km southeast of San Francisco. The largest incorporated city in the map area, Capitola, and numerous unincorporated towns including Aptos, lie on uplifted marine terraces between the shoreline, and the northwest-trending Santa Cruz Mountains, part of California’s Coast Ranges. The map area includes the northernmost part of Santa Cruz Harbor, and Moss Landing Harbor is located about 10 km south of the map area. The offshore part of the map area is entirely within California’s State Waters and is also part of the Monterey Bay National Marine Sanctuary. In the southern part of the map area, the Soquel Canyon State Marine Conservation Area extends eastward from the limit of California’s State Waters across Soquel Canyon. The Offshore of Aptos map area is on the western margin of North American Plate—the only continental margin in the world delineated largely by transform faults. The San Andreas Fault Zone cuts through the Santa Cruz Mountains just 3.5 km northeast of the map area. The San Gregorio Fault Zone, another major plate-boundary structure, cuts through Monterey Canyon about 13 km southwest of the map area. Ongoing deformation associated with and between these major fault zones has uplifted the Santa Cruz Mountains and formed well-developed sets of marine terraces that characterize almost the entire coastal zone of the map area. The offshore part of the map area consists of relatively flat and shallow continental shelf which is underlain by variable amounts (0 to 30 m) of upper Quaternary shelf, estuarine, and fluvial sediments deposited as sea level fluctuated in the late Pleistocene. Along the southern edge of the map area, the shelf is incised by the head of Soquel Canyon, a northeast-trending tributary to the west-trending Monterey Canyon. During the last sea-level lowstand (the Last Glacial Maximum [LGM], about 21,000 years ago) Soquel Creek flowed through a paleochannel across the emergent shelf into the head of Soquel Canyon. This canyon was disconnected from its onshore watershed during the post-LGM sea-level rise of about 125 m; the abandoned paleochannel was subsequently filled with marine sediment. Coastal sediment in the Offshore of Aptos map area is supplied by coastal watersheds and bluff erosion. Sediment transport in this part of the Santa Cruz littoral cell is primarily from the northwest to the southeast and terminates in the submarine Monterey Canyon. Longshore drift is impeded by jetties at Santa Cruz Harbor, resulting in high beach erosion rates east of the harbor. Sediment dredged from the harbor mouth (estimated 300,000 yds 3 /yr) is currently being used to nourish beaches directly to the east. Farther downcoast, the rapidly eroding beach at Capitola was stabilized by construction of an about 75-m-long groin. This part of central California is exposed to large North Pacific swells from the northwest throughout the year. North Pacific swell heights range from 2 to 10 meters, with larger swells occurring from October to May. During El Niño-Southern Oscillation (ENSO) events, winter storms track farther south than they do in normal (non-ENSO) years, thereby impacting the map area more frequently and with waves of larger heights. Bedrock exposed in coastal cliffs is relatively erosion-resistant, and significant erosional events primarily are restricted to storm-wave activity that also erodes the overlying unconsolidated marine-terrace sediments. The Offshore of Aptos map area lies within the cold-temperate biogeographic zone that is called either the “Oregonian” province or the “northern California ecoregion.” This biogeographic province is maintained by the long-term stability of the southward-flowing California Current, the eastern limb of the North Pacific subtropical gyre that flows from southern British Columbia to Baja California. At its midpoint off central California, the California Current transports subarctic surface (0–500 m deep) waters southward, about 150 to 1,300 km from shore. Seasonal northwesterly winds that are, in part, responsible for the California Current, generate coastal upwelling. The south end of the Oregonian province is at Point Conception (about 310 km southeast of the map area), although its associated phylogeographic group of marine fauna may extend beyond to the area offshore of Los Angeles in southern California. The ocean off of central California has experienced a warming over the last 50 years that is driving an ecosystem shift away from the productive subarctic regime towards a depopulated subtropical environment. Seafloor habitats in the Offshore of Aptos map area lie within the “Shelf” Megahabitat class and include patchy rocky habitats, gravel-rich scour depressions, minor bedrock habitat, and predominantly sandy inner shelf. Sandy shelf habitats grade offshore to mud-dominated habitats on the midshelf in deeper water. Biological productivity resulting from coastal upwelling supports populations of Sooty Shearwater, Western Gull, Common Murre, Cassin’s Auklet, and many other less populous bird species. In addition, an observable recovery of Humpback and Blue Whales has occurred in the area; both species are dependent on coastal upwelling to provide nutrients. California sea lions and Pacific harbor seals are abundant in the map area. Common bottlenose dolphins are often observed very close to shore and in the surf zone. The large extent of exposed inner shelf bedrock supports large forests of “bull kelp,” which is well adapted for high-wave-energy environments. The kelp beds are the northernmost known habitat for the population of southern sea otters. Common fish species found in the kelp beds and rocky reefs include blue rockfish, black rockfish, olive rockfish, kelp rockfish, gopher rockfish, black-and-yellow rockfish, painted greenling, kelp greenling, and lingcod.

California↗

USGS1973

Distribution of two western clapper rail races as determined by responses to taped calls

During 1969 and 1970, surveys of the endangered Yuma Clapper Rail were conducted using taped calls to elicit responses from the birds. During the two summers, more than 158 Yuma clappers were located in cattailtule marshes along the Colorado River south of Needles, California, to the International Boundary, a distance of about 240 miles. Clappers (probably of the same race) were also found in estuarian marshes of the Colorado River Delta of Mexico; in the Salton Sea; in two freshwater marsh areas near Phoenix, Arizona; and in two freshwater marshes adjacent to the lower Gila River near Tacna, Arizona.....Populations of Sonora Clapper Rails were discovered as permanent residents in five separate mangrove swamps along the west coast of Mexico in the vicinity of Kino Bay, Sonora. These observations were farther north than any heretofore reported for the race R. l. rhizophorae, and the swamps also represent the extreme northward limit of mangroves in Sonora.....During the winter, Yuma clappers did not respond to taped calls north of the International Boundary, whereas clappers along the coast of Sonora readily answered the calls during the same period of time. We conclude that most Yuma Clapper Rails migrate from their summer habitat along the Colorado River in September and do not return to the breeding areas until late April.

Condor↗

USGS2016

Potential effects of drought on carrying capacity for wintering waterfowl in the Central Valley of California

We used the bioenergetics model TRUEMET to evaluate potential effects of California's recent drought on food supplies for waterfowl wintering in the Central Valley under a range of habitat and waterfowl population scenarios. In nondrought years in the current Central Valley landscape, food supplies are projected to be adequate for waterfowl from fall through early spring (except late March) even if waterfowl populations reach North American Waterfowl Management Plan goals. However, in all drought scenarios that we evaluated, food supplies were projected to be exhausted for ducks by mid- to late winter and by late winter or early spring for geese. For ducks, these results were strongly related to projected declines in winter-flooded rice fields that provide 45% of all the food energy available to ducks in the Central Valley in nondrought water years. Delayed flooding of some managed wetlands may help alleviate food shortages by providing wetland food resources better timed with waterfowl migration and abundance patterns in the Central Valley, as well as reducing the amount of water needed to manage these habitats. However, future research is needed to evaluate the impacts of delayed flooding on waterfowl hunting, and whether California's existing water delivery system would make delayed flooding feasible. Securing adequate water supplies for waterfowl and other wetland-dependent birds is among the greatest challenges facing resource managers in coming years, especially in the increasingly arid western United States.

Journal of Fish and Wildlife Management↗

USGS2008

Breeding phenology and reproductive success of the Brandt's Cormorant at three nearshore colonies in central California, 1997-2001

Brandt's Cormorant ( Phalacrocorax penicillatus ) breeding effort, phenology and success were studied in 1997-2001 at three colonies spanning approximately 200 km of the central California coast: Point Reyes (PR); Devil's Slide Rock and Mainland (DS); and Castle-Hurricane Colony Complex (CH). Breeding effort was reduced at all three colonies in the 1998 El Niño event. Mean clutch initiation dates differed significantly among colonies, with cormorants at the southernmost colony (CH) laying earliest, and those at the northernmost colony (PR) laying latest. Productivity at individual colonies varied greatly among years (range 0.7-2.5 fledglings per pair). Overall colony means were lowest (1.6 fledglings/pair) during the 1998 El Niño event and highest (2.5 fledglings/pair) in the 1999 La Niña event. Productivity at CH (1.7 fledglings/pair) was significantly lower than at PR (2.2 fledglings/pair), and interannual variation was greatest at CH. Late-nesting birds laid fewer eggs, hatched fewer chicks, and fledged fewer chicks per pair than early-nesters. The rapid rate of growth at some nearshore colonies in central California suggests immigration from elsewhere, most likely the large offshore colony at the South Farallon Islands. Variation in timing of breeding and reproductive success among colonies demonstrates a value in maintaining multiple study locations when assessing Brandt's Cormorant population parameters in the California Current System.

Waterbirds↗