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Golden eagle (Aquila chrysaetos) habitat selection as a function of land use and terrain, San Diego County, California

Beginning in 2014, the U.S. Geological Survey, in collaboration with Bloom Biological, Inc., began telemetry research on golden eagles ( Aquila chrysaetos ) captured in the San Diego, Orange, and western Riverside Counties of southern California. This work was supported by the San Diego Association of Governments, California Department of Fish and Wildlife, the U.S. Fish and Wildlife Service, the Bureau of Land Management, and the U.S. Geological Survey. Since 2014, we have tracked more than 40 eagles, although this report focuses only on San Diego County eagles. An important objective of this research is to develop habitat selection models for golden eagles. Here we provide predictions of population-level habitat selection for golden eagles in San Diego County based on environmental covariates related to land use and terrain.

California

Effects of harmful algal blooms on amphibians and reptiles are under-reported and under-represented

Harmful algal blooms (HABs) are a persistent and increasing problem globally, yet we still have limited knowledge about how they affect wildlife. Although semi-aquatic and aquatic amphibians and reptiles have experienced large declines and occupy environments where HABs are increasingly problematic, their vulnerability to HABs remains unclear. To inform monitoring, management, and future research, we conducted a literature review, synthesized the studies, and report on the mortality events describing effects of cyanotoxins from HABs on freshwater herpetofauna. Our review identified 37 unique studies and 71 endpoints (no-observed-effect and lowest-observed-effect concentrations) involving 11 amphibian and 3 reptile species worldwide. Responses varied widely among studies, species, and exposure concentrations used in experiments. Concentrations causing lethal and sublethal effects in laboratory experiments were generally 1 to 100 µg/L, which contains the mean value of reported HAB events but is 70 times less than the maximum cyanotoxin concentrations reported in the environment. However, one species of amphibian was tolerant to concentrations of 10,000 µg/L, demonstrating potentially immense differences in sensitivities. Most studies focused on microcystin-LR (MC-LR), which can increase systemic inflammation and harm the digestive system, reproductive organs, liver, kidneys, and development. The few studies on other cyanotoxins illustrated that effects resembled those of MC-LR at similar concentrations, but more research is needed to describe effects of other cyanotoxins and mixtures of cyanotoxins that commonly occur in the environment. All experimental studies were on larval and adult amphibians; there were no such studies on reptiles. Experimental work with reptiles and adult amphibians is needed to clarify thresholds of tolerance. Only nine mortality events were reported, mostly for reptiles. Given that amphibians likely decay faster than reptiles, which have tissues that resist decomposition, mass amphibian mortality events from HABs have likely been under-reported. We propose that future efforts should be focused on seven major areas, to enhance our understanding of effects and monitoring of HABs on herpetofauna that fill important roles in freshwater and terrestrial environments. Environ Toxicol Chem 2024;00:1–14. Published 2024. This article is a U.S. Government work and is in the public domain in the USA. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC.

Environmental Toxicology and Chemistry

Renewable energy and wildlife conservation

The renewable energy sector is rapidly expanding and diversifying the power supply of the country. Yet, as our Nation works to advance renewable energy and to conserve wildlife, some conflicts arise. To address these challenges, the U.S. Geological Survey (USGS) is conducting innovative research and developing workable solutions to reduce impacts of renewable energy production on wildlife.

Fact Sheet

U.S. Geological Survey sagebrush ecosystem research annual report for 2020

The sagebrush ( Artemisia spp.) ecosystem extends across 251,473 square miles over portions of 13 western States. Affected by multiple stressors, including interactions among fire, invasive plants, and human land uses, this ecosystem has experienced significant loss, fragmentation, and degradation of landscapes once dominated by sagebrush. In turn, wildlife populations have declined following these deleterious conditions. Federal, State, local, and Tribal agencies, nongovernmental organizations, and industry have been galvanized by declining wildlife populations to implement management actions to confront the impacts of these stressors and ensure the long-term availability of the sagebrush ecosystem for the broad range of uses critical to stakeholders in the Western United States. The sagebrush ecosystem provides habitat for more than 350 species of plants and animals that are dependent on sagebrush for all or part of their annual life history. The greater sage-grouse ( Centrocercus urophasianus ) stands out as an iconic species of this ecosystem. Sage-grouse populations occur in 11 States, and 2 Canadian Provinces and require relatively large expanses of sagebrush-dominated habitat to meet all their seasonal habitat needs. Recent management actions to conserve and maintain the sagebrush ecosystem have focused on the protection and restoration of sage-grouse habitat; however, each of the 350 species has a unique life history and differing area requirements (for example, large areas for mule deer [ Odocoileus hemionus ] and small areas for pygmy rabbit [ Brachylagus idahoensis ]), and some species, such as migratory birds, rely on various parts of the sagebrush ecosystem but only for part of the year (for example, Brewer’s sparrow [ Spizella breweri ]). The U.S. Geological Survey (USGS) has a broad research program focused on the sagebrush ecosystem, wildlife species within the ecosystem, and the species’ response to stressors and management actions. The program provides a foundation of scientific information for use in major land and resource management decisions in the sagebrush ecosystem. By providing the science to inform these decisions, the USGS is assisting land and resource managers at the Federal, State, Tribal, and local levels working towards the goal of sustainable wildlife populations and restored landscapes. This information can inform planning and management conducted by nongovernmental organizations as well. USGS research is tailored specifically to inform adaptive management, improve strategies for maintaining existing areas of intact sagebrush, and restoring degraded landscapes. Examples of research support for partners include providing information for actions such as the preclusion of the need to list the greater sage-grouse under the Endangered Species Act and recent revisions to Bureau of Land Management and U.S. Department of Agriculture Forest Service resource management plans and land use. The USGS continues to provide foundational science to inform science-based decisions within the U.S. Department of the Interior and other Federal, State, and local agencies and their continued conservation, management, and restoration of the sagebrush ecosystem to help support local economies.

Arizona, California, Colorado, Idaho, Montana, Nev

U.S. Geological Survey sagebrush ecosystem research annual report for 2019

The sagebrush ( Artemisia spp.) ecosystem extends across a large portion of the Western United States. Affected by multiple stressors, including interactions among fire, exotic plant invasions, and human land uses, this ecosystem has experienced significant loss, fragmentation, and degradation of landscapes once dominated by sagebrush. In turn, wildlife populations have declined following these deleterious conditions. Federal, State, local, and Tribal agencies, nongovernmental organizations, and industry have been galvanized by declining wildlife populations to implement management actions to confront the impacts of these stressors and insure the long-term availability of the sagebrush ecosystem for the broad range of uses critical to stakeholders in the Western United States. The sagebrush ecosystem provides habitat for over 350 species of plants and animals that are dependent on sagebrush for all or part of their annual life history. The greater sage-grouse ( Centrocercus urophasianus ) stands out as the iconic species. Sage-grouse populations occur in 11 States and require relatively large expanses of sagebrush-dominated habitat to meet all their seasonal habitat needs. Recent management actions to conserve and maintain the sagebrush ecosystem have focused on the protection and restoration of sage-grouse habitat. However, each of the 350 species has a unique life history and differing area requirements (for example, large areas for Mule deer [ Odocoileus hemionus ] and small areas for pygmy rabbit [ Brachylagus idahoensis ]), and some species, such as migratory birds, only rely the sagebrush ecosystem for part of the year (for example, Brewer’s sparrow [ Spizella breweri ]). The U.S. Geological Survey (USGS) has a broad research program focused on the sagebrush ecosystem and these species and their response to stressors and management actions. The research is tailored specifically to inform and improve strategies for maintaining existing areas of intact sagebrush and restoring degraded landscapes. By providing the science to inform these strategies, the USGS is assisting land and resource managers at the Federal, State, Tribal, and local levels working towards sustainable wildlife populations and restored landscapes. The USGS provides a foundation of scientific information for use in major land and resource management decisions in the sagebrush ecosystem. These have included such actions as the preclusion of the need to list the greater sage-grouse under the Endangered Species Act and recent revisions to Bureau of Land Management and U.S. Department of Agriculture Forest Service resource management plans. The USGS continues to build on that foundation to inform science-based decisions within the U.S. Department of the Interior and other Federal, State, and local agencies and their continued conservation, management, and restoration of the sagebrush ecosystem to help support local economies.

Arizona, California, Colorado, Idaho, Montana, New

A Review and Synthesis of the Scientific Information Related to the Biology and Management of Species of Special Concern at Cape Hatteras National Seashore, North Carolina

The U.S. Geological Survey's Patuxent Wildlife Research Center (PWRC) conducted a study for the National Park Service (NPS) Southeast Region, Atlanta, GA, and Cape Hatteras National Seashore (CAHA) in North Carolina to review, evaluate, and summarize the available scientific information for selected species of concern at CAHA (piping plovers, sea turtles, seabeach amaranth, American oystercatchers, and colonial waterbirds). This work consisted of reviewing the scientific literature and evaluating the results of studies that examined critical life history stages of each species, and focused on the scientific findings reported that are relevant to the management of these species and their habitats at CAHA. The chapters that follow provide the results of that review separately for each species and present scientifically based options for resource management at CAHA. Although no new original research or experimental work was conducted, this synthesis of the existing information was peer reviewed by over 15 experts with familiarity with these species. This report does not establish NPS management protocols but does highlight scientific information on the biology of these species to be considered by NPS managers who make resource management decisions at CAHA. To ensure that the best available information is considered when assessing each species of interest at CAHA, this review included published research as well as practical experience of scientists and wildlife managers who were consulted in 2005. PWRC scientists evaluated the literature, consulted wildlife managers, and produced an initial draft that was sent to experts for scientific review. Revisions based on those comments were incorporated into the document. The final draft of the document was reviewed by NPS personnel to ensure that the description of the recent status and management of these species at CAHA was accurately represented and that the report was consistent with our work agreement. The following section summarizes the biological information relevant to resource management for the species of concern at CAHA.

Open-File Report

Fort Collins Science Center - Fiscal Year 2008 Science Accomplishments

Public land and natural resource managers in the United States are confronted with increasingly complex decisions that have important ramifications for both ecological and human systems. The scientists and technical professionals at the U.S. Geological Survey (USGS) Fort Collins Science Center (FORT) contribute a unique blend of ecological, socioeconomic, and technological expertise to investigating complicated ecological problems that address critical management questions. In Fiscal Year 2008 (FY08), FORT's scientific and technical professionals continued research vital to the science and management needs of U.S. Department of the Interior agencies and other entities. This annual report describes select FY08 accomplishments in research and technical assistance involving biological information management and delivery; aquatic, riparian, and managed-river ecosystems; invasive species; status and trends of biological resources (including human dimensions and social science); terrestrial ecosystems; and fish and wildlife resources.

Open-File Report

Survival of Bristle-thighed Curlews equipped with externally mounted transmitters

Telemetry devices are widely used in avian research, but the degree to which the deployment of such devices affects the survival of study subjects is often not addressed. It is generally assumed that such effects are less pronounced in large-bodied species that conduct relatively short migrations and carry relatively light telemetry devices. We studied Bristle-thighed Curlews Numenius tahitiensis over the period 2012–2017 at a nonbreeding site on the island of Oahu, Hawaii. We used leg-loop harnesses to equip 11 curlews with externally mounted, solar-powered satellite transmitters that constituted ca. 3% of their body mass, and compared the annual survival of these birds to 37 curlews marked only with uniquely engraved leg flags. Despite the species’ large size and the small mass of the transmitters, we documented potential negative effects of externally mounted transmitters on the survival of Bristle-thighed Curlews. We also documented apparent effects of age and sex on the survival of curlews, underscoring the difficulty of disentangling the effects of research techniques on study subjects. Understanding and publicizing the potential effects of research itself on wildlife are crucial steps in the process of refining technical applications and improving the welfare of study animals. We urge researchers to critically assess and report the effects of similar research techniques to minimize deleterious effects in future studies.

Wader Study

Salamander chytrid fungus ( Batrachochytrium salamandrivorans ) in the United States—Developing research, monitoring, and management strategies

The recently (2013) identified pathogenic chytrid fungus, Batrachochytrium salamandrivoran s ( Bsal ), poses a severe threat to the distribution and abundance of salamanders within the United States and Europe. Development of a response strategy for the potential, and likely, invasion of Bsal into the United States is crucial to protect global salamander biodiversity. A formal working group, led by Amphibian Research and Monitoring Initiative (ARMI) scientists from the U.S. Geological Survey (USGS) Patuxent Wildlife Research Center, Fort Collins Science Center, and Forest and Rangeland Ecosystem Science Center, was held at the USGS Powell Center for Analysis and Synthesis in Fort Collins, Colorado, United States from June 23 to June 25, 2015, to identify crucial Bsal research and monitoring needs that could inform conservation and management strategies for salamanders in the United States. Key findings of the workshop included the following: (1) the introduction of Bsal into the United States is highly probable, if not inevitable, thus requiring development of immediate short-term and long-term intervention strategies to prevent Bsal establishment and biodiversity decline; (2) management actions targeted towards pathogen containment may be ineffective in reducing the long-term spread of Bsal throughout the United States; and (3) early detection of Bsal through surveillance at key amphibian import locations, among high-risk wild populations, and through analysis of archived samples is necessary for developing management responses. Top research priorities during the preinvasion stage included the following: (1) deployment of qualified diagnostic methods for Bsal and establishment of standardized laboratory practices, (2) assessment of susceptibility for amphibian hosts (including anurans), and (3) development and evaluation of short- and long-term pathogen intervention and management strategies. Several outcomes were achieved during the workshop, including development of an organizational structure with working groups for a Bsal Task Force, creation of an initial influence diagram to aid in identifying effective management actions in the face of uncertainty, and production of a list of potential management actions and key research uncertainties. Additional products under development include a Bsal Strategic Action plan, an emergency response plan, a monitoring and surveillance program, a standardized diagnostic approach, decision models for natural resource agencies, and a reporting database for salamander mortalities. This workshop was the first international meeting to address the threat of Bsal to salamander populations in the United States, with more than 30 participants from U.S. conservation and resource management agencies (U.S. Fish and Wildlife Service, U.S. Forest Service, U.S. Department of Defense, U.S. National Park Service, and Association of Fish and Wildlife Agencies) and academic research institutions in Australia, the Netherlands, Switzerland, the United Kingdom, and the United States.

Open-File Report

Is your bird feeder safe?

Bird feeding is a popular activity for millions of Americans. Some of our favorite bird species commonly visit bird feeders and these stations may be an important factor in their well-being during some segments of their life-cycle. However, poorly maintained feeding stations may contribute to the occurrence of infectious disease and mortality. In recent years there have been unprecedented reports of songbird mortality events and the occurrence of a previously unreported disease in songbirds. The National Wildlife Health Center of the U.S. Geological Survey conducts research on diseases in wildlife, their causes, and means of preventing or reducing disease outbreaks.

Bird Conservation

The Andean condor as a research surrogate for the California condor

Captive propagation of Andean Condors ( Vultur gryphus ) was initiated at the Patuxent Wildlife Research Center in 1966 in anticipation of the need to apply resulting techniques to the captive breeding of the endangered California Condor ( Gymnogyps californianus ). This report summarizes the progress made on this Andean Condor breeding and research project, with emphasis on recent fostering/cross-fostering studies. These studies include: (a) fostering eggs/chicks between Andean Condors; (b) fostering of two chicks each to Andean Condor pairs; (c) cross-fostering of a Turkey Vulture ( Cathartes aura ) to Andean Condors; and (d) cross-fostering an Andean Condor chick to wild California Condors. Implications of these studies for the recovery of the California Condor will be discussed.

Book chapter

Fishery population and habitat assessment in Puerto Rico streams: Phase 2 final report

This document serves as the Final Report for research on Puerto Rico stream fishes and their habitat funded by the Puerto Rico Department of Natural and Environmental Resources, in the form of a grant to the North Carolina Cooperative Fish and Wildlife Research Unit. This research was also conducted to meet the thesis requirement for a Master of Science degree granted to Elissa Buttermore (Chapters 3–4) and the dissertation requirement for a Doctor of Philospophy degree granted to William Smith (Chapters 5–8). Formatting differs among chapters, as each was developed to target a specific scientific journal and to conform to journal style.

Puerto Rico

Bats and wind energy: a literature synthesis and annotated bibliography

Turbines have been used to harness energy from wind for hundreds of years. However, with growing concerns about climate change, wind energy has only recently entered the mainstream of global electricity production. Since early on in the development of wind-energy production, concerns have arisen about the potential impacts of turbines to wildlife; these concerns have especially focused on the mortality of birds. Despite recent improvements to turbines that have resulted in reduced mortality of birds, there is clear evidence that bat mortality at wind turbines is of far greater conservation concern. Bats of certain species are dying by the thousands at turbines across North America, and the species consistently affected tend to be those that rely on trees as roosts and most migrate long distances. Turbine-related bat mortalities are now affecting nearly a quarter of all bat species occurring in the United States and Canada. Most documented bat mortality at wind-energy facilities has occurred in late summer and early fall and has involved tree bats, with hoary bats ( Lasiurus cinereus ) being the most prevalent among fatalities. This literature synthesis and annotated bibliography focuses on refereed journal publications and theses about bats and wind-energy development in North America (United States and Canada). Thirty-six publications and eight theses were found, and their key findings were summarized. These publications date from 1996 through 2011, with the bulk of publications appearing from 2007 to present, reflecting the relatively recent conservation concerns about bats and wind energy. The idea for this Open-File Report formed while organizing a joint U.S. Fish and Wildlife Service/U.S. Geological Survey "Bats and Wind Energy Workshop," on January 25-26, 2012. The purposes of the workshop were to develop a list of research priorities to support decision making concerning bats with respect to siting and operations of wind-energy facilities across the United States. This document was intended to provide background information for the workshop participants on what has been published on bats and wind-energy issues in North America (United States and Canada).

Open-File Report

Threats posed by the Fungal Kingdom to humans, wildlife, and agriculture

The Fungal Kingdom includes at least six million eukaryotic species and is remarkable with respect to its profound impact on global health, biodiversity, ecology, agriculture, manufacturing, and biomedical research. Approximately 625 fungal species have been reported to infect vertebrates, 200 of which can be human-associated, either as commensals and members of our microbiome or as pathogens that cause infectious diseases. These organisms pose a growing threat to human health with the global increase in the incidence of invasive fungal infections, prevalence of fungal allergy, and the evolution of fungal pathogens resistant to some or all current classes of antifungals. More broadly, there has been an unprecedented and worldwide emergence of fungal pathogens impacting animal and plant biodiversity. Approximately 8,000 species of fungi and Oomycetes are associated with plant disease. Indeed, across agriculture, such fungal diseases of plants include new devastating epidemics of trees and jeopardize food security worldwide by causing epidemics in staple and commodity crops that feed billions. Further, ingestion of mycotoxins contributes to ill health and causes cancer. Coordinated international research efforts, enhanced technology translation, and greater policy outreach by scientists are needed to more fully understand the biology and drivers that underlie the emergence of fungal diseases and to mitigate against their impacts. Here, we focus on poignant examples of emerging fungal threats in each of three areas: human health, wildlife biodiversity, and food security.

mBio

Historical and contemporary imagery to assess ecosystem change on the Arctic coastal plain of northern Alaska

The Arctic Coastal Plain of northern Alaska is a complex landscape of lakes, streams, and wetlands scattered across low-relief tundra that is underlain by permafrost. This region of the Arctic has experienced a warming trend over the past three decades leading to thawing of on-shore permafrost and the disappearance of sea ice at unprecedented rates. The U.S. Geological Survey’s (USGS) Changing Arctic Ecosystems (CAE) research initiative was developed to investigate and forecast these rapid changes in the physical environment of the Arctic, and the associated changes to wildlife populations, in order to inform key management decisions by the U.S. Department of the Interior and other agencies. Forecasting future wildlife responses to changes in the Arctic can benefit greatly from historical records that inform what changes have already occurred. Several Arctic wildlife and plant species have already responded to climatic and physical changes to the Arctic Coastal Plain of northern Alaska. Thus, we located historical aerial imagery to improve our understanding of recent habitat changes and the associated response to such changes by wildlife populations. In this report, we describe and make available a set of 61 georectified aerial images of the Arctic Coastal Plain (taken from 1948 to 2010) that were obtained by the USGS to inform research objectives of the USGS CAE Initiative. Here, we describe the origins, metadata, and public availability of these images that were obtained within four main study areas on the Arctic Coastal Plain: Teshekpuk Lake Special Area, Chipp River, the Colville River Delta, and locations along the Dalton Highway Corridor between the Brooks Range and Deadhorse. We also provide general descriptions of observable changes to the geomorphology of landscapes that are apparent by comparing historical and contemporary images. These landscape changes include altered river corridors, lake drying, coastal erosion, and new vegetation communities. All original and georectified images and metadata are available through the USGS Alaska Science Center Portal (search under ‘Project Name’ using title of this report) or by contacting ascweb@usgs.gov .

Alaska