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At least 199 records · Page 11Linked to original sources

Ecological impacts of energy-wood harvests: Lessons from whole-tree harvesting and natural disturbance

Recent interest in using forest residues and small-diameter material for biofuels is generating a renewed focus on harvesting impacts and forest sustainability. The rich legacy of research from whole-tree harvesting studies can be examined in light of this interest. Although this research largely focused on consequences for forest productivity, in particular carbon and nutrient pools, it also has relevance for examining potential consequences for biodiversity and aquatic ecosystems. This review is framed within a context of contrasting ecosystem impacts from whole-tree harvesting because it represents a high level of biomass removal. Although whole-tree harvesting does not fully use the nonmerchantable biomass available, it indicates the likely direction and magnitude of impacts that can occur through energy-wood harvesting compared with less-intensive conventional harvesting and to dynamics associated with various natural disturbances. The intent of this comparison is to gauge the degree of departure of energy-wood harvesting from less intensive conventional harvesting. The review of the literature found a gradient of increasing departure in residual structural conditions that remained in the forest when conventional and whole-tree harvesting was compared with stand-replacing natural disturbance. Important stand- and landscape-level processes were related to these structural conditions. The consequence of this departure may be especially potent because future energy-wood harvests may more completely use a greater range of forest biomass at potentially shortened rotations, creating a great need for research that explores the largely unknown scale of disturbance that may apply to our forest ecosystems.

Journal of Forestry

Investing in citizen science can improve natural resource management and environmental protection

Citizen science has made substantive contributions to science for hundreds of years. More recently, it has contributed to many articles in peer-reviewed scientific journals and has influenced natural resource management and environmental protection decisions and policies across the nation. Over the last 10 years, citizen science—participation by the public in a scientific project—has seen explosive growth in the United States, particularly in ecology, the environmental sciences, and related fields of inquiry. In this report, we explore the current use of citizen science in natural resource and environmental science and decision making in the United States and describe the investments organizations might make to benefit from citizen science.

Issues in Ecology

Early detection of wildlife disease pathogens using CRISPR-Cas system methods

Wildlife diseases are a considerable threat to human health, conservation, and the economy. Surveillance is a critical component to mitigate the impact of animal diseases in these sectors. To monitor human diseases, CRISPR-Cas (clustered regularly interspaced short palindromic repeats-CRISPR-associated protein) biosensors have proven instrumental as diagnostic tools capable of detecting unique DNA and RNA sequences related to their associated pathogens. However, despite the significant advances in the general development of CRISPR-Cas biosensors, their use to support wildlife disease management is lagging. In some cases, wildlife diseases of concern could be rapidly surveyed using these tools with minimal technical, operational, or cost requirements to end users. This review explores the potential to further leverage this technology to advance wildlife disease monitoring and highlights how concerted standardization of protocols can help to ensure data reliability.

The CRISPR Journal

Stopover ecology of a migratory ungulate

1. Birds that migrate long distances use stopover sites to optimize fuel loads and complete migration as quickly as possible. Stopover use has been predicted to facilitate a time-minimization strategy in land migrants as well, but empirical tests have been lacking, and alternative migration strategies have not been considered. 2. We used fine-scale movement data to evaluate the ecological role of stopovers in migratory mule deer Odocoileus hemionus — a land migrant whose fitness is strongly influenced by energy intake rather than migration speed. 3. Although deer could easily complete migrations (range 18–144 km) in several days, they took an average of 3 weeks and spent 95% of that time in a series of stopover sites that had higher forage quality than movement corridors. Forage quality of stopovers increased with elevation and distance from winter range. Mule deer use of stopovers corresponded with a narrow phenological range, such that deer occupied stopovers 44 days prior to peak green-up, when forage quality was presumed to be highest. Mule deer used one stopover for every 5∙3 and 6∙7 km travelled during spring and autumn migrations, respectively, and used the same stopovers in consecutive years. 4. Study findings indicate that stopovers play a key role in the migration strategy of mule deer by allowing individuals to migrate in concert with plant phenology and maximize energy intake rather than speed. Our results suggest that stopover use may be more common among non-avian taxa than previously thought and, although the underlying migration strategies of temperate ungulates and birds are quite different, stopover use is important to both. 5. Exploring the role of stopovers in land migrants broadens the scope of stopover ecology and recognizes that the applied and theoretical benefits of stopover ecology need not be limited to avian taxa.

Journal of Animal Ecology

Using structured decision making to guide habitat restoration for butterflies: A case study of Oregon silverspots

When making decisions about how to restore habitat for at-risk species, land managers must balance multiple competing objectives in the face of uncertainty about the impacts of management actions on at-risk populations. The Oregon silverspot ( Speyeria = Argynnis zerene hippolyta ) is a federally threatened butterfly, and uncertainty exists about the effects of proposed management. We used structured decision making (SDM) to guide restoration for Oregon silverspots. Managers identified persistence as their primary objective and further identified effects of herbicides as a key uncertainty. We developed a model of population dynamics incorporating management actions and parameterized the model based on experiments with a surrogate subspecies, the Zerene silverspot ( S. z. zerene ). Herbicide application may directly harm Oregon silverspots by increasing larval mortality, while indirectly benefiting silverspots by reducing the competition faced by their host plant. In this system, potential herbicide treatments include grass-specific fluazifop-P-butyl or forb-specific clopyralid applied with Agri-Dex ® or Nu-Film ® -IR adjuvants. We found that Oregon silverspot population growth rate is greatest with clopyralid and fluazifop-P-butyl when combined with Nu-Film ® -IR than other alternatives (including no treatment) considering only direct effects or in combination with indirect effects. An adaptive management program would benefit Oregon silverspots by promoting exploration of management alternatives while allowing managers to act quickly to arrest steep declines. Uncertainty remains regarding how well our results will generalize in field conditions.

Journal of Insect Conservation

Environmental controls, emergent scaling, and predictions of greenhouse gas (GHG) fluxes in coastal salt marshes

Coastal salt marshes play an important role in mitigating global warming by removing atmospheric carbon at a high rate. We investigated the environmental controls and emergent scaling of major greenhouse gas (GHG) fluxes such as carbon dioxide (CO 2 ) and methane (CH 4 ) in coastal salt marshes by conducting data analytics and empirical modeling. The underlying hypothesis is that the salt marsh GHG fluxes follow emergent scaling relationships with their environmental drivers, leading to parsimonious predictive models. CO 2 and CH 4 fluxes, photosynthetically active radiation (PAR), air and soil temperatures, well water level, soil moisture, and porewater pH and salinity were measured during May–October 2013 from four marshes in Waquoit Bay and adjacent estuaries, MA, USA. The salt marshes exhibited high CO 2 uptake and low CH 4 emission, which did not significantly vary with the nitrogen loading gradient (5–126 kg · ha −1 · year −1 ) among the salt marshes. Soil temperature was the strongest driver of both fluxes, representing 2 and 4–5 times higher influence than PAR and salinity, respectively. Well water level, soil moisture, and pH did not have a predictive control on the GHG fluxes, although both fluxes were significantly higher during high tides than low tides. The results were leveraged to develop emergent power law‐based parsimonious scaling models to accurately predict the salt marsh GHG fluxes from PAR, soil temperature, and salinity (Nash‐Sutcliffe Efficiency = 0.80–0.91). The scaling models are available as a user‐friendly Excel spreadsheet named Coastal Wetland GHG Model to explore scenarios of GHG fluxes in tidal marshes under a changing climate and environment.

Massachusetts

An overview and participatory framework for choosing spatial boundaries in social–ecological systems modeling

A common challenge when modeling social–ecological systems (SESs) is defining the spatial extent of the system. Boundaries that do not adequately capture both social and ecological processes and their interactions can lead to mischaracterization of the system, while expanding boundaries too widely can impact model complexity and required resources. Socially, boundaries can invoke and influence identity, culture, power, and sense of place. Boundary decisions benefit from flexible, iterative approaches and the expertise of local communities. Here, we use a structured database search supplemented with citation searching to identify and review the literature that addresses choosing or defining spatial boundaries in SESs mapping or modeling and, when applicable, how participatory methods were used in the research process. In a review of the resulting 79 studies, we discovered that pre-existing social or ecological boundaries were used most frequently (36 and 18 publications, respectively). Twenty-one publications combined social and ecological boundaries or data to create custom boundaries, and four studies used an alternative approach to conventional boundaries. Informed by the literature review, we present a general framework for defining boundaries at the outset of SES research. We then connect the framework to a specific case study based on a collaborative project with Tribal, university, and federal scientists to develop a social–ecological climate adaptation plan. We present guiding questions alongside candidate boundaries for our study system and explore the tradeoffs of these boundary options, which can function as a useful template for other social–ecological research collaborations.

ISPRS International Journal of Geo-Information

Hepatotoxic response of perfluorooctane sulfonamide (PFOSA) in early life stage zebrafish (Danio rerio) is greater than perfluorooctane sulfonate (PFOS)

Perfluorooctane sulfonamide (PFOSA), a typical perfluorooctane sulfonate precursor (PreFOS), has been detected in the aquatic environment globally. However, the effects of PFOSA at levels measured in the environment have not been well characterized in aquatic organisms. In this study, we evaluated the transcriptional, biochemical, histopathological, and morphological effects of PFOSA to characterize the underlying mechanisms of toxicity by using a universal model in aquatic ecotoxicology, zebrafish ( Danio rerio ). Transcriptional changes in PFOSA-exposed zebrafish predicted hepatic fibrosis and associated immune function. Subsequent, sublethal impacts were observed, which included significant alterations in liver-specific protein levels, increased immune cell numbers, and liver pathological structural damage. In addition, we compared the effects caused by PFOSA and perfluorooctane sulfonate (PFOS) at the same exposure concentration and found a greater hepatotoxic effect of PFOSA relative to PFOS, indicating that the adverse impacts of PFOSA may be more severe. This was the first study to comparatively explore the hepatotoxic response of PFOSA and PFOS in aquatic organisms, which can be used for ecological risk assessments of PreFOS compounds.

Journal of Hazardous Materials

Depositional environments as a guide to uranium mineralization in the Chinle Formation, San Rafael Swell, Utah

Uranium deposits in the San Rafael Swell are related to sedimentary depositional environments in the Upper Triassic Chinle Formation. The sedimentary textures resulting from depositional processes operating in low-energy environments appear to have influenced uranium mineralization. The Ohinle consists of three fining-upward, fluvial-lacustrine sequences. Uranium minerals are concentrated in the lower part of the lowest sequence in areas where sediments of low-energy environments are complexly interbedded with sediments of other environments. Areas favorable for uranium exploration exist in the subsurface to the north, west, and south of the Chinle outcrop in the Swell. This determination is based on the spatial distribution of depositional environments and the pattern of Chinle deposition through time.

Utah

Gravitational stresses in anisotropic rock masses

This paper presents closed-form solutions for the stress field induced by gravity in anisotropic rock masses. These rocks are assumed to be laterally restrained and are modelled as a homogeneous, orthotropic or transversely isotropic, linearly elastic material. The analysis, constrained by the thermodynamic requirement that strain energy be positive definite, gives the following important result: inclusion of anisotropy broadens the range of permissible values of gravity-induced horizontal stresses. In fact, for some ranges of anisotropic rock properties, it is thermodynamically admissible for gravity-induced horizontal stresses to exceed the vertical stress component; this is not possible for the classical isotropic solution. Specific examples are presented to explore the nature of the gravity-induced stress field in anisotropic rocks and its dependence on the type, degree and orientation of anisotropy with respect to the horizontal ground surface. ?? 1987.

International Journal of Rock Mechanics and Mining

A tangled tale of two teal: Population history of the grey Anas gracilis and chestnut teal a. castanea of Australia

Two Australian species of teal (Anseriformes: Anatidae: Anas), the grey teal Anas gracilis and the chestnut teal A. castanea, are remarkable for the zero or near-zero divergence recorded between them in earlier surveys of mitochondrial DNA (mtDNA) diversity. We confirmed this result through wider geographical and population sampling as well as nucleotide sampling in the more rapidly evolving mtDNA control region. Any data set where two species share polymorphism as is the case here can be explained by a model of gene flow through hybridization on one hand or by incomplete lineage sorting on the other hand. Ideally, analysis of such shared polymorphism would simultaneously estimate the likelihood of both phenomena. To do this, we used the underlying principle of the IMa package to explore ramifications to understanding population histories of A. gracilis and A. castanea. We cannot reject that hybridization occurs between the two species but an equally or more plausible finding for their nearly zero divergence is incomplete sorting following very recent divergence between the two, probably in the mid-late Pleistocene. Our data add to studies that explore intermediate stages in the evolution of reciprocal monophyly and paraphyletic or polyphyletic relationships in mtDNA diversity among widespread Australian birds. ?? 2009 J. Avian Biol.

Journal of Avian Biology

Characterizing the influence of remotely sensed wetland and lake water storage on discharge using LSTM models

Globally, many wetlands and lakes are at risk for further loss, which can amplify downstream consequences of flood and drought events. We derived remotely sensed based time series of surface water storage (SW storage ) to determine when and where accounting for SW storage dynamics improves predictions of river discharge. We trained four long short-term memory (LSTM) models, that differed in their inclusion of storage data and catchment characteristics, to simulate daily river discharge (2016–2023) for select watersheds across the conterminous United States. Adding SW storage to a meteorology-only or meteorology-and-catchment characteristics model improved upon model Nash-Sutcliffe efficiency (NSE) in 80.6% of the watersheds. Residuals during low-flow (Q70) events decreased by 47.6% when adding storage to meteorological data. Improvements were most consistent in ecoregions with a greater abundance of non-floodplain lakes and wetlands. This effort represents the first exploration to train a multi-watershed LSTM on landscape-scale remotely sensed time series of SW storage .

conterminous United States

Using stable isotopes of carbon to investigate the seasonal variation of carbon transfer in a northwestern Arkansas cave

Stable-isotope analyses are valuable in karst settings, where characterizing biogeochemical cycling of carbon along groundwater flow paths is critical for understanding and protecting sensitive cave and karst water resources. This study quantified the seasonal changes in concentration and isotopic composition ( δ 13C) of aqueous and gaseous carbon species—dissolved inorganic carbon (DIC) and gaseous carbon dioxide (CO 2 )—to characterize sources and transfer of these species along a karst flow path, with emphasis on a cave environment. Gas and water samples were collected from the soil and a cave in northwestern Arkansas approximately once a month for one year to characterize carbon cycling along a conceptual groundwater flow path. In the soil, as the DIC concentration increased, the isotopic composition of the DIC became relatively lighter, indicating an organic carbon source for a component of the DIC and corroborating soil DIC as a proxy for soil respiration. In the cave, a positive correlation between DIC and surface temperature was due to increased soil respiration as the organic carbon signal from the soil was transferred to the cave environment via the aqueous phase. CO 2 concentration was lowest in the cave during colder months and increased exponentially with increasing surface temperature, presumably due to higher rates of soil respiration during warmer periods and changing ventilation patterns between the surface and cave atmosphere. Isotopic disequilibrium between CO 2 and DIC in the cave was greatest when CO 2 concentration was changing during November/ December and March/April, presumably due to the rapid addition or removal of gaseous CO 2 . The isotopic disequilibrium between DIC and CO 2 provided evidence that cave CO 2 was a mixture of carbon from several sources, which was mostly constrained by mixture between atmospheric CO 2 and soil CO 2 . The concentration and isotopic composition of gaseous and aqueous carbon species were controlled by month-to-month variations in temperature and precipitation and provided insight into the sources of carbon in the cave. Stable carbon isotope ratios provided an effective tool to explore carbon transfer from the soil zone and into the cave, identify carbon sources in the cave, and investigate how seasonality affected the transfer of carbon in a shallow karst system.

Journal of Cave and Karst Studies

India National Gas Hydrate Program Expedition 02 Summary of Scientific Results: Gas hydrate systems along the eastern continental margin of India

The primary objectives of the India National Gas Hydrate Program Expedition 02 (NGHP-02) were to obtain new data on the occurrence of gas hydrate systems and to advance the understanding of the controls on the formation of gas hydrate accumulations in the offshore of India. In accordance with the ultimate overall goal of the NGHP effort to assess the energy resource potential of marine gas hydrates in India, particular focus was placed on the exploration and evaluation of gas hydrate occurrences at high saturations in sand-rich systems. NGHP-02 operations were conducted from 3-March-2015 to 28-July-2015 off the eastern coast of India and included logging while drilling (LWD) operations at 25 locations, and coring and wireline logging operations at 10 locations, in the Krishna-Godavari and Mahanadi Basins. The formation of highly concentrated gas hydrate accumulations, which are more suitable for energy extraction, requires the presence of relatively coarse-grained sediments with porosity needed to support the migration and accumulation of gas, and the nucleation of gas hydrate. The results of downhole logging, coring and formation pressure testing operations during NGHP-02 have confirmed the presence of extensive sand-rich depositional systems throughout the deepwater portions of the Krishna-Godavari and Mahanadi Basins. Two areas of Krishna-Godavari Basin, referred to as Areas B and C, contain substantial gas hydrate accumulations in sand-rich systems and therefore represent ideal candidate sites for future gas hydrate production testing. This summary and technical report includes a comprehensive synthesis of the geologic, geophysical, geochemical, and physical property data acquired during NGHP-02 as it relates to the controls on gas hydrate occurrence, particularly with regards to sand-hosted accumulations. In the Mahanadi Basin, despite the confirmation of extensive reservoir capacity, gas supply at the NGHP-02 sites was insufficient to charge the reservoirs with gas hydrates. In the Krishna-Godavari Basin, extensive reservoir systems were confirmed with sediment grain-sizes ranging from coarse-silts to gravels. These reservoirs range from fully- to partially filled with gas hydrate. The gas is determined to be from only microbial sources, and in part migrated into the reservoirs from deeper systems. The controls on gas hydrate occurrence are complex and varied; and include substantial reservoir heterogeneity and sufficient permeability throughout the reservoirs and seals that allowed pervasive fluid flow into and through the hydrate-bearing systems. These discoveries are the most significant confirmation of the exploration approach that focuses on direct detection of hydrate reservoirs supported by comprehensive petroleum systems analyses.

Journal of Marine and Petroleum Geology

When best intentions are not enough - A collaboration between scientists, policymakers, and an agricultural community

Rocky Mountain National Park is a Congressionally mandated Clean Air Act Class I Area, but years of research have documented evidence of biogeochemical and ecological change caused by atmospheric deposition of nitrogen. A coalition of government agencies—National Park Service, the Environmental Protection Agency Region 8, and the State of Colorado—developed the 2007 Nitrogen Deposition Reduction Plan to reduce wet nitrogen deposition to the park from the baseline in 2006 by 50% by 2032. Fifty-four percent of wet nitrogen deposition is ammonium, primarily sourced from industrial cattle and dairy operations east of the park. An Agriculture Subcommittee, meeting with regulatory and management agencies and scientists since 2006, has explored voluntary options to reduce ammonia emissions. Ammonia emissions are unregulated in the U.S. Despite sustained efforts, neither ammonium deposition nor total inorganic nitrogen deposition have declined at the rate determined to reach the targeted value by 2032. In fact, ammonia is increasing over the Front Range agricultural area. Wet nitrogen deposition in 2024 was 2.81 kg N ha −1 yr −1 , 0.61 kg N ha −1 yr −1 higher than targeted in the Nitrogen Deposition Reduction Plan. The collaborative approach between agricultural producers, regulatory entities, and resource managers is not working, but not for lack of effort by all parties. Cattle process nitrogen inefficiently, and while management practices can somewhat reduce the proportion of ammonia emitted from feedlots, with more than one million head of cattle east of Rocky Mountain National Park, large-scale reductions are unlikely. New programs to reduce emissions of nitrogen oxides (46% of wet nitrogen deposition) may reduce nitrogen deposition that is changing park ecosystems. Improved integration of crop and livestock agriculture and valuation of the ecosystem services and economy of Rocky Mountain National Park alongside agricultural value are topics for further discussion. Implications : Nitrogen deposition in precipitation to Rocky Mountain National Park has changed natural ecosystems. To protect its Clean Air Act Class I status a 2007 Nitrogen Deposition Reduction Plan agreed upon by state and federal agencies set a goal to reduce wet nitrogen deposition to the Park by half by 2032. Industrial livestock operations are a large source of nitrogen; an Agriculture Subcommittee explored voluntary options to reduce emissions from cattle. Despite sustained efforts nitrogen deposition has not declined. Further reductions in industry and transportation emissions will be needed reduce nitrogen deposition to Rocky Mountain National Park.

Colorado

Subsurface water ice mapping on Mars: A probabilistic approach

Subsurface water ice deposits on Mars are an important resource for potential future human exploration. They are also an indicator of the planet’s past climate. However, the distribution of subsurface water ice in Mars’s midlatitudes is uncertain because spacecraft imagery cannot directly observe subsurface ice in most cases. Various spacecraft remote sensing instruments are sensitive to subsurface water ice, including thermal imaging spectrometers, radar sounders, and neutron spectrometers. Geomorphic analyses of images can also implicate subsurface ice. Building upon the data products from the Mars Subsurface Water Ice Mapping project, we provide a probabilistic framework to jointly interpret existing data and estimate the likelihood of subsurface water ice in the Martian midlatitudes between 60 ∘ S and 60 ∘ N with uncertainty. Broadly, we find that near-surface ice is likely present poleward of ∼45 ∘ in both the northern and southern hemispheres. However, closer to the equator, existing remote sensing data cannot uniquely constrain the presence of subsurface water ice. Our probabilistic results provide a framework for quantifying the abundance of ice on Mars, and our uncertainty estimates allow future analysis and exploration to target regions of high uncertainty.

Planetary Science Journal

Gas shale/oil shale

The production of natural gas from shales continues to increase in North America, and shale gas exploration is on the rise in other parts of the world since the previous report by this committee was published by American Association of Petroleum Geologists, Energy Minerals Division (2009). For the United States, the volume of proved reserves of natural gas increased 11% from 2008 to 2009, the increase driven largely by shale gas development (Energy Information Administration 2010c). Furthermore, shales have increasingly become targets of exploration for oil and condensate as well as gas, which has served to greatly expand their significance as ‘‘unconventional’’ petroleum reservoirs. This report provides information about specific shales across North America and Europe from which gas (biogenic or thermogenic), oil, or natural gas liquids are produced or is actively being explored. The intent is to reflect the recently expanded mission of the Energy Minerals Division (EMD) Gas Shales Committee to serve as a single point of access to technical information on shales regardless of the type of hydrocarbon produced from them. The contents of this report were drawn largely from contributions by numerous members of the EMD Gas Shales Advisory Committee, with much of the data being available from public websites such as state or provincial geological surveys or other public institutions. Shales from which gas or oil is being produced in the United States are listed in alphabetical order by shale name. Information for Canada is presented by province, whereas for Europe, it is presented by country.

Natural Resources Research

Skin fungal assemblages of bats vary based on susceptibility to white-nose syndrome

Microbial skin assemblages, including fungal communities, can influence host resistance to infectious diseases. The diversity-invasibility hypothesis predicts that high-diversity communities are less easily invaded than species-poor communities, and thus diverse microbial communities may prevent pathogens from colonizing a host. To explore the hypothesis that host fungal communities mediate resistance to infection by fungal pathogens, we investigated characteristics of bat skin fungal communities as they relate to susceptibility to the emerging disease white-nose syndrome (WNS). Using a culture-based approach, we compared skin fungal assemblage characteristics of 10 bat species that differ in susceptibility to WNS across 10 eastern U.S. states. The fungal assemblages on WNS-susceptible bat species had significantly lower alpha diversity and abundance compared to WNS-resistant species. Overall fungal assemblage structure did not vary based on WNS-susceptibility, but several yeast species were differentially abundant on WNS-resistant bat species. One yeast species inhibited Pseudogymnoascus destructans ( Pd ), the causative agent on WNS, in vitro under certain conditions, suggesting a possible role in host protection. Further exploration of interactions between Pd and constituents of skin fungal assemblages may prove useful for predicting susceptibility of bat populations to WNS and for developing effective mitigation strategies.

ISME Journal