Search USGS⌕ Search

SEARCH · Search USGS

Results for “Biology Direct”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 199 records · Page 11Linked to original sources

Quality assurance practices for the chemical and biological analyses of water and fluvial sediments

This chapter contains practices used by the U.S. Geological Survey to assure the quality of analytical data for water, fluvial sediment, and aquatic organisms. These practices are directed primarily toward personnel making water-quality measurements. Some detail specific quality control techniques, others document quality assurance procedures being used by the Central Laboratories System of the U.S. Geological Survey, and still others describe various statistical techniques and give examples of their use in evaluating and assuring the quality of analytical data. The practices are arranged into eight sections: Analytical Methods Development Procedures Standard Quantitative Analysis Techniques Instrumental Techniques Reference Material Laboratory Quality Control Quality Assurance Monitoring Documentation, Summary, and Evaluation of Data Materials Evaluation Each section is preceded by a brief description of the material covered. Similarly within each section, each practice is preceded by a description of its application or scope.

Open-File Report↗

Quality assurance practices for the chemical and biological analyses of water and fluvial sediments

This chapter contains practices used by the U.S. Geological Survey to assure the quality of analytical data for water, fluvial sediment, and aquatic organisms. These practices are directed primarily toward personnel making water quality measurements. Some detail specific quality control techniques, others document quality assurance procedures being used by the Central Laboratories System of the U.S. Geological Survey, and still others describe various statistical techniques and give examples of their use in evaluating and assuring the quality of analytical data. The practices are arranged into eight sections: Analytical Methods Development Procedures, Standard Quantitative Analysis Techniques, Instrumental Techniques, Reference Material, Laboratory Quality Control; Quality Assurance Monitoring; Documentation, Summary, and Evaluation of Data, Materials Evaluation. Each section is preceded by a brief description of the material covered. Similarly within each section, each practice is preceded by a description of its application or scope.

Techniques of Water-Resources Investigations↗

Prevalence of Influenza A viruses in wild migratory birds in Alaska: Patterns of variation in detection at a crossroads of intercontinental flyways

Background. The global spread of the highly pathogenic avian influenza H5N1 virus has stimulated interest in a better understanding of the mechanisms of H5N1 dispersal, including the potential role of migratory birds as carriers. Although wild birds have been found dead during H5N1 outbreaks, evidence suggests that others have survived natural infections, and recent studies have shown several species of ducks capable of surviving experimental inoculations of H5N1 and shedding virus. To investigate the possibility of migratory birds as a means of H5N1 dispersal into North America, we monitored for the virus in a surveillance program based on the risk that wild birds may carry the virus from Asia. Results. Of 16,797 birds sampled in Alaska between May 2006 and March 2007, low pathogenic avian influenza viruses were detected in 1.7% by rRT-PCR but no highly pathogenic viruses were found. Our data suggest that prevalence varied among sampling locations, species (highest in waterfowl, lowest in passerines), ages (juveniles higher than adults), sexes (males higher than females), date (highest in autumn), and analytical technique (rRT-PCR prevalence = 1.7%; virus isolation prevalence = 1.5%). Conclusion. The prevalence of low pathogenic avian influenza viruses isolated from wild birds depends on biological, temporal, and geographical factors, as well as testing methods. Future studies should control for, or sample across, these sources of variation to allow direct comparison of prevalence rates. ?? 2008 Ip et al; licensee BioMed Central Ltd.

Virology Journal↗

Influence of beaver activity on summer growth and condition of age-2 Atlantic salmon parr

The activity of beavers Castor canadensis in freshwater environments can have considerable localized impacts on the physical and biological components of riparian ecosystems. By changing the habitat of a stream, beaver dams can cause spatial variation in growth opportunity that may have direct consequences for the growth of resident fish. In a small stream in eastern Canada, we studied the effects of an ephemeral beaver pond on the growth and maturity of age-2 Atlantic salmon Salmo salar parr tagged with passive integrated transponder tags. Water temperature remained relatively uniform throughout the study site. We found very little movement of recaptured fish in the study site. Fish that were recaptured in the beaver pond displayed faster summer growth rates in both length and mass than fish that were recaptured immediately above or below the pond. We also found that parr in the pond maintained relatively high condition factors, whereas fish above and below the pond appeared to decrease in condition factor throughout the summer. In addition to growth, the maturation rates of age-2 males were higher above the dam than below. This study demonstrates the effect a beaver dam can have on individual growth rates. By influencing growth during sensitive periods, the beaver pond may also influence individual life history pathways. This information could be an important component in ecosystem models that predict the effect of beaver population dynamics on the growth of individual salmonids at the landscape scale. ?? Copyright by the American Fisheries Society 2006.

Transactions of the American Fisheries Society↗

Importance of storm events in controlling ecosystem structure and function in a Florida Gulf Coast estuary

From 8/95 to 2/01, we investigated the ecological effects of intra- and inter-annual variability in freshwater flow through Taylor Creek in southeastern Everglades National Park. Continuous monitoring and intensive sampling studies overlapped with an array of pulsed weather events that impacted physical, chemical, and biological attributes of this region. We quantified the effects of three events representing a range of characteristics (duration, amount of precipitation, storm intensity, wind direction) on the hydraulic connectivity, nutrient and sediment dynamics, and vegetation structure of the SE Everglades estuarine ecotone. These events included a strong winter storm in November 1996, Tropical Storm Harvey in September 1999, and Hurricane Irene in October 1999. Continuous hydrologic and daily water sample data were used to examine the effects of these events on the physical forcing and quality of water in Taylor Creek. A high resolution, flow-through sampling and mapping approach was used to characterize water quality in the adjacent bay. To understand the effects of these events on vegetation communities, we measured mangrove litter production and estimated seagrass cover in the bay at monthly intervals. We also quantified sediment deposition associated with Hurricane Irene's flood surge along the Buttonwood Ridge. These three events resulted in dramatic changes in surface water movement and chemistry in Taylor Creek and adjacent regions of Florida Bay as well as increased mangrove litterfall and flood surge scouring of seagrass beds. Up to 5 cm of bay-derived mud was deposited along the ridge adjacent to the creek in this single pulsed event. These short-term events can account for a substantial proportion of the annual flux of freshwater and materials between the mangrove zone and Florida Bay. Our findings shed light on the capacity of these storm events, especially when in succession, to have far reaching and long lasting effects on coastal ecosystems such as the estuarine ecotone of the SE Everglades.

Journal of Coastal Research↗

Projected climate impacts for the amphibians of the western hemisphere

Given their physiological requirements, limited dispersal abilities, and hydrologically sensitive habitats, amphibians are likely to be highly sensitive to future climatic changes. We used three approaches to map areas in the western hemisphere where amphibians are particularly likely to be affected by climate change. First, we used bioclimatic models to project potential climate-driven shifts in the distribution of 413 amphibian species based on 20 climate simulations for 2071–2100. We summarized these projections to produce estimates of species turnover. Second, we mapped the distribution of 1099 species with restricted geographic ranges. Finally, using the 20 future climate-change simulations, we mapped areas that were consistently projected to receive less seasonal precipitation in the coming century and thus were likely to have altered microclimates and local hydrologies. Species turnover was projected to be highest in the Andes Mountains and parts of Central America and Mexico, where, on average, turnover rates exceeded 60% under the lower of two emissions scenarios. Many of the restricted-range species not included in our range-shift analyses were concentrated in parts of the Andes and Central America and in Brazil's Atlantic Forest. Much of Central America, southwestern North America, and parts of South America were consistently projected to experience decreased precipitation by the end of the century. Combining the results of the three analyses highlighted several areas in which amphibians are likely to be significantly affected by climate change for multiple reasons. Portions of southern Central America were simultaneously projected to experience high species turnover, have many additional restricted-range species, and were consistently projected to receive less precipitation. Together, our three analyses form one potential assessment of the geographic vulnerability of amphibians to climate change and as such provide broad-scale guidance for directing conservation efforts.

Conservation Biology↗

Cretaceous anuran and dinosaur footprints from the Patuxent Formation of Virginia

Footprints of an anuran (gen. et sp. indet.), a theropod dinosaur (Megalosauropus sp.), and an ornithopod dinosaur (Amblydactylus sp.) have been recovered from the Lower Cretaceous Patuxent Formation in Stafford County, Virginia. These footprints are the first record of terrestrial vertebrates from Cretaceous strata in Virginia, and their discovery suggests that the scarcity of bones and teeth in the Patuxent probably is an artifact of preservation. The anuran trackway provides the oldest known direct evidence for hopping locomotion among these amphibians.

Proceedings of the Biological Society of Washingto↗

Lateral trends and vertical sequences in estuarine sediments, Willapa Bay, Washington

Willapa Bay is a sizable estuary on the southern coast of Washington- Relatively unmodified in a geologic sense by human activity the bay provides an excellent example of modern depositional facies in an estuarine setting. Studies of these deposits indicate that consistent lateral trends exist in sediment texture and sedimentary structures. The texture changes from sandy at the mouth of the bay to muddy in its upper parts. In any part of the bay , sediment is coarsest in the channel bottoms, where lag deposits accumulate. The sediment tends to fine in an upslope direction and is finest in supratidal flat deposits of silt and clay. The nature of sedimentary structures depends on the combination of physical and biological processes and sediment textures. Bedforms exist wherever the bed is sandy. In the main tidal channels sandwaves and dunes up to 4 meters high occur. In tributary channels and at the margins of the main channel, at shallower depths and under less intense currents , the structures are generally less than a meter high. Current ripples occur in t he sandy bed of all of the tidal channels and in runoff channels cross the tidal flat. Symmetric long-crested ripples are produced by wave action over the sandy intertidal flat. Internal structures in the bay's sediment depend not only on the nature of the bedform but also on the rate of bioturbation relative to physical processes. Under fields of large sandwaves or dunes, medium- to large-scale tabular and trough crossbedding predominates. This crossbedding generally is unidirectional, reflecting the locally dominant current (ebb or flood). Ripple bedding predominates elsewhere in sandy sediment within the channels. Where sand transport is diminished, as on the floor of the upper tributary channels, bioturbation exceeds the rate of production of physical structures and bedding is destroyed. The depositional banks in such areas tend to be sites of rapid sediment accumulation and bedding in the form of interlayered sand (commonly ripple bedded) and mud persists. On intertidal flats the sediment accumulates slowly and bioturbation erases nearly all physical structures. Bedding is preserved only where deposition is locally rapid , as in topographic depressions or on the depositional banks of runoff channels, or where faunal activity is inhibited, as beneath mounds of blue-green algae. The rate of sedimentation is slower still on the supratidal flats, but the general paucity of faunal activity allows the preservation of thin alternations of fine sand , silt or clay. The lateral migration of the tidal channels produces vertical sequences in which topographically higher facies are superposed on one another. Near the mouth of the estuary the upward sequence: lag deposit — crossbedded sand — ripple or planar-bedded sand is typical. The crossbedding shows a general upward decrease in thickness and a progression from trough to tabular units. In the main tidal channel - in the central estuary and in sandy tributary channels, the typical vertical sequence resembles that near the mouth , with the exception that the sequence is capped by bioturbated sandy or muddy tide flat deposits. In the upper estuary , where muddy sediment predominates, a typical sequence shows the progression-. bioturbated lag deposit — gently dipping interlaminated sand and mud layers of the accretionary bank — bioturbated mud flat deposits — thinly laminated fine supratidal deposits.

Oregon, Washington↗

Temporal dynamics of estuarine phytoplankton: A case study of San Francisco Bay

Detailed surveys throughout San Francisco Bay over an annual cycle (1980) show that seasonal variations of phytoplankton biomass, community composition, and productivity can differ markedly among estuarine habitat types. For example, in the river-dominated northern reach (Suisun Bay) phytoplankton seasonality is characterized by a prolonged summer bloom of netplanktonic diatoms that results from the accumulation of suspended particulates at the convergence of nontidal currents (i.e. where residence time is long). Here turbidity is persistently high such that phytoplankton growth and productivity are severely limited by light availability, the phytoplankton population turns over slowly, and biological processes appear to be less important mechanisms of temporal change than physical processes associated with freshwater inflow and turbulent mixing. The South Bay, in contrast, is a lagoon-type estuary less directly coupled to the influence of river discharge. Residence time is long (months) in this estuary, turbidity is lower and estimated rates of population growth are high (up to 1-2 doublings d-1), but the rapid production of phytoplankton biomass is presumably balanced by grazing losses to benthic herbivores. Exceptions occur for brief intervals (days to weeks) during spring when the water column stratifies so that algae retained in the surface layer are uncoupled from benthic grazing, and phytoplankton blooms develop. The degree of stratification varies over the neap-spring tidal cycle, so the South Bay represents an estuary where (1) biological processes (growth, grazing) and a physical process (vertical mixing) interact to cause temporal variability of phytoplankton biomass, and (2) temporal variability is highly dynamic because of the short-term variability of tides. Other mechanisms of temporal variability in estuarine phytoplankton include: zooplankton grazing, exchanges of microalgae between the sediment and water column, and horizontal dispersion which transports phytoplankton from regions of high productivity (shallows) to regions of low productivity (deep channels). Multi-year records of phytoplankton biomass show that large deviations from the typical annual cycles observed in 1980 can occur, and that interannual variability is driven by variability of annual precipitation and river discharge. Here, too, the nature of this variability differs among estuary types. Blooms occur only in the northern reach when river discharge falls within a narrow range, and the summer biomass increase was absent during years of extreme drought (1977) or years of exceptionally high discharge (1982). In South Bay, however, there is a direct relationship between phytoplankton biomass and river discharge. As discharge increases so does the buoyancy input required for density stratification, and wet years are characterized by persistent and intense spring blooms. ?? 1985 Dr W. Junk Publishers.

Hydrobiologia↗

Final report to the Gulf Coast Joint Venture: Black Skimmer and Gull-billed Tern

Many bird species are of conservation concern across the Northern Gulf of Mexico from stressors such as human disturbance, predation, and habitat loss due to directional environmental change (e.g., increased sea-level rise and storm frequency and intensity, human infrastructure, changes in land use). Consequently, managers need decision-support tools that can help to answer important conservation questions for different species (e.g., which areas and how much area should be targeted by management actions to meet a particular species’ needs). The Black Skimmer ( Rynchops niger ; hereafter Skimmer) and Gull-billed Tern ( Gelochelidon nilotica ; hereafter Tern) are designated as U.S. Fish and Wildlife Service (USFWS) Species of Conservation Concern and Gulf Coast Joint Venture (GCJV) Priority Species with nesting habitats in the USFWS Gulf Coast Biological Planning Units (BPU; Tirpak et al. 2017). They are also representative of a variety of other beach and barrier-island nesting birds whose Gulf Coast nesting habitats are threatened by directional environmental change. The Skimmer has breeding pair targets in six GCJV Initiative Areas (IA), and the Tern has breeding pair targets in five GCJV IAs. Our goal was to inform GCJV management scenarios that efficiently and simultaneously achieve both species’ targets by prioritizing sites where management actions (e.g., maintain existing habitat or change habitat, geomorphology [landmass area, landmass elevation], predator management, human and dog restrictions) could be implemented.

Final Report↗

Examining historical mercury sources in the Saint Louis River estuary: How legacy contamination influences biological mercury levels in Great Lakes coastal regions

Industrial chemical contamination within coastal regions of the Great Lakes can pose serious risks to wetland habitat and offshore fisheries, often resulting in fish consumption advisories that directly affect human and wildlife health. Mercury (Hg) is a contaminant of concern in many of these highly urbanized and industrialized coastal regions, one of which is the Saint Louis River estuary (SLRE), the second largest tributary to Lake Superior. The SLRE has legacy Hg contamination that drives high Hg concentrations within sediments, but it is unclear whether legacy-derived Hg actively cycles within the food web. To understand the relative contributions of legacy versus contemporary Hg sources in coastal zones, Hg, carbon, and nitrogen stable isotope ratios were measured in sediments and food webs of SLRE and the Bad River, an estuarine reference site. Hg stable isotope values revealed that legacy contamination of Hg was widespread and heterogeneously distributed in sediments of SLRE, even in areas lacking industrial Hg sources. Similar isotope values were found in benthic invertebrates, riparian spiders, and prey fish from SLRE, confirming legacy Hg reaches the SLRE food web. Direct comparison of prey fish from SLRE and the Bad River confirmed that Hg isotope differences between the sites were not attributable to fractionation associated with rapid Hg bioaccumulation at estuarine mouths, but due to the presence of industrial Hg within SLRE. The Hg stable isotope values of game fish in both estuaries were dependent on fish migration and diet within the estuaries and extending into Lake Superior. These results indicate that Hg from legacy contamination is actively cycling within the SLRE food web and, through migration, this Hg also extends into Lake Superior via game fish. Understanding sources and the movement of Hg within the estuarine food web better informs restoration strategies for other impaired Great Lakes coastal zones.

Minnesota, Wisconsin↗

Plant community resistance to invasion by Bromus species: The roles of community attributes, Bromus interactions with plant communities, and Bromus traits

The factors that determine plant community resistance to exotic annual Bromus species ( Bromus hereafter) are diverse and context specific. They are influenced by the environmental characteristics and attributes of the community, the traits of Bromus species, and the direct and indirect interactions of Bromus with the plant community. Environmental factors, in particular ambient and soil temperatures, have significant effects on the ability of Bromus to establish and spread. Seasonality of precipitation relative to temperature influences plant community resistance to Bromus through effects on soil water storage, timing of water and nutrient availability, and dominant plant life forms. Differences among plant communities in how well soil resource use by the plant community matches resource supply rates can influence the magnitude of resource fluctuations due to either climate or disturbance and thus the opportunities for invasion. The spatial and temporal patterns of resource availability and acquisition of growth resources by Bromus versus native species strongly influence resistance to invasion. Traits of Bromus that confer a “priority advantage” for resource use in many communities include early-season germination and high growth and reproductive rates. Resistance to Bromus can be overwhelmed by high propagule supply, low innate seed dormancy, and large, if short-lived, seed banks. Biological crusts can inhibit germination and establishment of invasive annual plants, including several annual Bromus species, but are effective only in the absence of disturbance. Herbivores can have negative direct effects on Bromus , but positive indirect effects through decreases in competitors. Management strategies can be improved through increased understanding of community resistance to exotic annual Bromus species.

Book chapter↗

Landuse legacies and small streams: Identifying relationships between historical land use and contemporary stream conditions

The concept of landscape legacies has been examined extensively in terrestrial ecosystems and has led to a greater understanding of contemporary ecosystem processes. However, although stream ecosystems are tightly coupled with their catchments and, thus, probably are affected strongly by historical catchment conditions, few studies have directly examined the importance of landuse legacies on streams. We examined relationships between historical land use (1944) and contemporary (2000-2003) stream physical, chemical, and biological conditions after accounting for the influences of contemporary land use (1999) and natural landscape (catchment size) variation in 12 small streams at Fort Benning, Georgia, USA. Most stream variables showed strong relationships with contemporary land use and catchment size; however, after accounting for these factors, residual variation in many variables remained significantly related to historical land use. Residual variation in benthic particulate organic matter, diatom density, % of diatoms in Eunotia spp., fish density in runs, and whole-stream gross primary productivity correlated negatively, whereas streamwater pH correlated positively, with residual variation in fraction of disturbed land in catchments in 1944 (i.e., bare ground and unpaved road cover). Residual variation in % recovering land (i.e., early successional vegetation) in 1944 was correlated positively with residual variation in streambed instability, a macroinvertebrate biotic index, and fish richness, but correlated negatively with residual variation in most benthic macroinvertebrate metrics examined (e.g., Chironomidae and total richness, Shannon diversity). In contrast, residual variation in whole-stream respiration rates was not explained by historical land use. Our results suggest that historical land use continues to influence important physical and chemical variables in these streams, and in turn, probably influences associated biota. Beyond providing insight into biotic interactions and their associations with environmental conditions, identification of landuse legacies also will improve understanding of stream impairment in contemporary minimally disturbed catchments, enabling more accurate assessment of reference conditions in studies of biotic integrity and restoration. ?? 2008 by The North American Benthological Society.

Journal of the North American Benthological Societ↗

Assessment of nutrient enrichment by use of algal-, invertebrate-, and fish-community attributes in wadeable streams in ecoregions surrounding the Great Lakes

The algal, invertebrate, and fish taxa and community attributes that best reflect the effects of nutrients along a gradient of low to high nutrient concentrations in wadeable, primarily midwestern streams were determined as part of the U.S. Geological Suvey's National Water-Quality Assessment (NAWQA) Program. Nutrient data collected from 64 sampling sites that reflected reference, agricultural, and urban influences between 1993 and 2006 were used to represent the nutrient gradient within Nutrient Ecoregion VI (Cornbelt and Northern Great Plains), VII (Mostly Glaciated Dairy Region), and VIII (Nutrient Poor Largely Glaciated Upper Midwest and Northeast). Nutrient Ecoregions VII and VIII comprise the Glacial North diatom ecoregion (GNE) and Nutrient Ecoregion VI represents the Central and Western Plains diatom ecoregion (CWPE). The diatom-ecoregion groupings were used chiefly for data analysis. The total nitrogen (TN) and total phosphorus (TP) data from 64 sites, where at least 6 nutrient samples were collected within a year at each site, were used to classify the sites into low-, medium-, and high-nutrient categories based upon the 10th and 75th percentiles of for sites within each Nutrient Ecoregion. In general, TN and TP concentrations were 3-5 times greater in Nutrient Ecoregion VI than in Nutrient Ecoregions VII and VIII. A subgroup of 54 of these 64 sites had algal-, invertebrate-, and fish-community data that were collected within the same year as the nutrients; these sites were used to assess the effects of nutrients on the biological communities. Multidimensional scaling was used to determine whether the entire region could be assessed together or whether there were regional differences between the algal, invertebrate, and fish communities. The biological communities were significantly different between the northern sites, primarily in the GNE and the southern sites, primarily in the CWPE. In the higher nutrient concentration gradient in the streams of the CWPE, algae exhibited greater differences than invertebrates and fish between all of the nutrient categories for both TN and TP; however, in the lower nutrient gradient in the streams of the GNE, invertebrates exhibited greater differences between the nutrient categories. Certain species of algae, invertebrates, and fish were more prevalent in low- and high-nutrient categories within each of the diatom ecoregions. Breakpoint analysis was used to identify the concentration at which the relations between the response variable (biological attribute) and the stressor variable (TN and TP) change. There were significant breakpoints for nutrients (TN and TP) and multiple attributes for algae, invertebrates, and fish communities within the CWPE and GNE diatom ecoregions. In general, more significant breakpoints, with lower concentrations, were found in the GNE than the more nutrient-rich CWPE. The breakpoints from all biological communities were generally about 3-5 times higher in the south (CWPE) than the north (GNE). In the north, breakpoints with similar lower concentrations were found for TN from all biological communities (around 0.60 milligram per liter) and for TP (between 0.02 and 0.03 milligram per liter) for the algae and invertebrate communities. The findings from our study suggest that the range in breakpoints for TN and TP from the GNE can be used as oligotrophic and eutrophic boundaries derived from biological response based on this ecoregion having (1) a gradient with sufficiently low to high nutrient concentrations, (2) distinctive differences in the biological communities in the low- to high-nutrient streams, (3) similarity of breakpoints within algal, invertebrate, and fish communities, (4) significant attributes with either direct relations to nutrients or traditional changes in community structure (that is, decreases in sensitive species or increases in tolerant species), and (5) similar breakpoints in other studies in this and other regions. In nutrie

Scientific Investigations Report↗

Integrating research and management to conserve wildfowl (Anatidae) and wetlands in the Mississippi Alluvial Valley, U.S.A

Efforts to conserve winter habitat for wildfowl, Anatidae, in the alluvial valley of the lower Mississippi River, U.S.A., are directed by the Lower Mississippi Valley (LMV) Joint Venture of the North American Waterfowl Management Plan (NA WMP). The Joint Venture is based on a biological framework developed through cooperative planning by wildfowl researchers and managers. Important elements of the framework include: (1) numeric population goals, (2) assumptions about potential limiting factors, (3) explicit relationships between wildfowl abundance and habitat characteristics, (4) numeric foraging habitat goals, and (5) criteria for evaluating success. The population goal of the Joint Venture for the Mississippi Alluvial Valley (MA V) is to enable 4.3 million ducks to, survive winter and join continental breeding populations in spring. Currently, available data suggest that foraging habitat is the primary factor limiting duck populations in the MA II. To establish a goal for foraging habitat, we assumed the length of the wintering period is 110 days and calculated that a population of 4.3 million breeding ducks (plus 15% to account for winter mortality) would need 546 million duck-days of food in the preceding winter. Then, we used estimates of daily energy requirements, food densities, and food energy values to calculate the carrying capacity or number of duck-days of food available in the three primary foraging habitats in the MAV (flooded croplands, forested wetlands, and moist-soil wetlands). Thus, availability of foraging habitat can be used as a criterion for evaluating success of the Joint Venture if accurate inventories of foraging habitat can be conducted. Development of an explicit biological framework for the Joint Venture enabled wildfowl managers and researchers to establish specific objectives for management of foraging habitat and identify priority problems requiring further study.

Book chapter↗

Interaction of a legacy groundwater contaminant plume with the Little Wind River from 2015 through 2017, Riverton Processing site, Wyoming

The Riverton Processing site was a uranium mill 4 kilometers southwest of Riverton, Wyoming, that prepared uranium ore for nuclear reactors and weapons from 1958 to 1963. The U.S. Department of Energy completed surface remediation of the uranium tailings in 1989; however, groundwater below and downgradient from the tailings site and nearby Little Wind River was not remediated. Beginning in 2010, a series of floods along the Little Wind River began to mobilize contaminants in the unsaturated zone, resulting in substantial increases of uranium and other contaminants of concern in monitoring wells completed inside the contaminant plume. In 2011, the U.S. Department of Energy started a series of university and Government agency retrospective and field investigations to understand the processes controlling contaminant increases in the groundwater plume. The goals of the field investigations described in this report were to (1) identify and quantify the contaminant flux and potential associated biological effects from groundwater associated with the legacy plume as it enters a perennial stream reach, and (2) assess chemical exposure and potential effects to biological receptors from the interaction of the contaminant plume and the river. Field investigations along the Little Wind River were completed by the U.S. Geological Survey during 2015–17 in cooperation with the U.S. Department of Energy Office of Legacy Management to characterize: (1) seepage areas and seepage rates; (2) pore-water and bed sediment chemistry and hyporheic exchange and reactive loss; and (3) exposure pathways and biological receptors. All data collected during the study are contained in two U.S. Geological Survey data releases, available at https://doi.org/10.5066/F7BR8QX4 and https://doi.org/10.5066/P9J9VJBR . A variety of tools and methods were used during the field characterizations. Streambed temperature mapping, electrical resistivity tomography, electromagnetic induction, fiber-optic distributed temperature sensing, tube seepage meters, vertical thermal sensor arrays, and an environmental tracer (radon) were used to identify areas of groundwater seepage and associated seepage rates along specific sections of the study reach of the river. Drive points, minipiezometers, diffusive equilibrium in thin-film/diffusive gradients in thin-film probes, bed-sediment samples, and equal discharge increment sampling methods were used to characterize pore-water chemistry, estimate hyporheic exchange and reactive loss of selected chemical constituents, and quantify contaminant loadings entering the study reach. Sampling and analysis of surface sediments, filamentous algae, periphytic algae, and macroinvertebrates were used to characterize biological exposure pathways, metal uptake, and receptors. Areas of focused groundwater discharge identified by the fiber-optic distributed temperature sensing surveys corresponded closely with areas of elevated electrical conductivity identified by the electromagnetic induction survey results in the top 5 meters of sediment. During three monitoring periods in 2016, the mean vertical seepage rate measured with tube seepage meters was 0.45 meter per day, ranging from −0.02 to 1.55 meters per day. Five of the 11 locations where vertical thermal profile data were collected along the study reach during August 2017 indicated mean upwelling values ranging from 0.11 to 0.23 meter per day. Radon data collected from the Little Wind River during June, July, and August 2016 indicated a consistent inflow of groundwater to the central part of the study reach, in the area congruous with the center of the previously mapped groundwater plume discharge zone. During August 2017, the greatest attenuation of uranium from reactive loss in pore-water samples was observed at three locations along the study reach, at depths between 6 and 15 centimeters, and similar trends in molybdenum attenuation were also observed. Bed-sediment concentration profiles collected during 2017 also indicated attenuation of uranium and molybdenum from groundwater during hyporheic mixing of surface water with the legacy plume during groundwater upwelling into the river. Streamflow measurements combined with equal discharge increment water sampling along the study reach indicated an increase in dissolved uranium concentrations in the downstream direction during 2016 and 2017. Net uranium load entering the Little Wind River study reach was about 290 and 435 grams per day during 2016 and 2017, respectively. Biological samples indicated that low levels of uranium and molybdenum exposure were confined to the benthos in the Little Wind River within and immediately downstream from the perimeter of the groundwater plume. Concentrations of molybdenum and uranium in filamentous algae were consistently low at all sites in the study reach with no indication of increased exposure of dissolved bioavailable molybdenum or uranium at sites next to or downstream from the groundwater plume. Comparison of the August 2017 results from electromagnetic induction, tube seepage meters, vertical thermal profiling, and pore-water chemistry surveys were in general agreement in identifying areas with upwelling groundwater conditions along the study reach. However, the electroconductivity values measured with electromagnetic induction in the top 100 centimeters of sediment did not agree with sodium concentrations measured in pore-water samples collected at similar streambed depths. Differences and similarities between multiple methods can result in additional insights into hydrologic and biogeochemical processes that may be occurring along a reach of a river system interacting with shallow groundwater inputs. It may be advantageous to apply a variety of geophysical, geochemical, hydrologic, and biological tools at other Uranium Mill Tailings Remedial Action ( https://www.energy.gov/sites/prod/files/2014/10/f19/UMTRCA.pdf ) sites during the investigation of legacy contaminant plume interactions with surface-water systems.

Wyoming↗

Maturation of male age-0 Atlantic salmon following a massive, localized flood

Maturation of male age-0 Atlantic salmon Salmo salar parr in New England, U.S.A. streams is rare (˜5%), but age-0 parr maturation was high (74%) by autumn in the Sawmill River following a massive, localized flood. Maturation was low in two other study streams (3, 7%) in the same year as the flood, and in the Sawmill River (6%) and the other rivers (5%) in the subsequent year, suggesting that high maturation rates were related to the flood. The high age-0 maturation rates appear to have been the result of greater growth opportunity following the flood. Masses of fish in October were two-fold greater in the Sawmill River (13·2 g) than in the other rivers (6·5, 6·9 g). Mechanisms contributing to the fast growth may include community reorganization following the flood and water temperature differences among rivers. The flood caused an age-0 year-class failure for brook trout Salvelinus fontinalis and brown trout Salmo trutta and a large reduction (69%) in the number of salmon compared to the other rivers, possibly reducing competition or agonistic interactions among remaining fish. Average water temperatures were slightly warmer in the Sawmill River (17·0° C) than in the other rivers (15·5, 14·9° C). By influencing community structure and growth of remaining fish, it appears that a strong environmental disturbance can also alter the direction and timing of life histories in Atlantic salmon.

Journal of Fish Biology↗

An evaluation of a reagentless method for the determination of total mercury in aquatic life

Multiple treatment (i.e., drying, chemical digestion, and oxidation) steps are often required during preparation of biological matrices for quantitative analysis of mercury; these multiple steps could potentially lead to systematic errors and poor recovery of the analyte. In this study, the Direct Mercury Analyzer (Milestone Inc., Monroe, CT) was utilized to measure total mercury in fish tissue by integrating steps of drying, sample combustion and gold sequestration with successive identification using atomic absorption spectrometry. We also evaluated the differences between the mercury concentrations found in samples that were homogenized and samples with no preparation. These results were confirmed with cold vapor atomic absorbance and fluorescence spectrometric methods of analysis. Finally, total mercury in wild captured largemouth bass (n = 20) were assessed using the Direct Mercury Analyzer to examine internal variability between mercury concentrations in muscle, liver and brain organs. Direct analysis of total mercury measured in muscle tissue was strongly correlated with muscle tissue that was homogenized before analysis (r = 0.81, p < 0.0001). Additionally, results using this integrated method compared favorably (p < 0.05) with conventional cold vapor spectrometry with atomic absorbance and fluorescence detection methods. Mercury concentrations in brain were significantly lower than concentrations in muscle (p < 0.001) and liver (p < 0.05) tissues. This integrated method can measure a wide range of mercury concentrations (0-500 ??g) using small sample sizes. Total mercury measurements in this study are comparative to the methods (cold vapor) commonly used for total mercury analysis and are devoid of laborious sample preparation and expensive hazardous waste. ?? Springer 2006.

Water, Air, & Soil Pollution↗