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USGS2023

Relative effectiveness of a radionuclide (210Pb), surface elevation table (SET), and LiDAR at monitoring mangrove forest surface elevation change

Sea-level rise (SLR) is one of the greatest future threats to mangrove forests. Mangroves have kept up with or paced past SLR by maintaining their forest floor elevation relative to sea level through root growth, sedimentation, and peat development. Monitoring surface elevation change (SEC) or accretion rates allows us to understand mangrove response to SLR and prioritizes resilient ecosystems for conservation or vulnerable ecosystems for restoration. We compared three methods to measure SEC and accretion in mangrove forests: 210 Pb, surface elevation tables (SETs), and a terrestrial light detection and ranging system (compact biomass LiDAR—CBL). Lead-210 accretion rates were not significantly different than SET SEC rates and differences between the two methods (− 2 to 2 mm/year) were within the error of our measurements. Lead-210 only measures accretion in the upper meter of sediment and cannot capture deeper subsurface processes (e.g., subsidence, compaction) that SETs can. The lack of differences suggests the following: (1) surface processes in the active root zone are influencing forest floor elevation more than subsurface processes, (2) subsurface processes were not large enough to effect elevation, or (3) the SETs were not installed deep enough to capture subsurface processes. CBL SEC rates did not differ significantly from SET SEC rates. The larger spatial scale of the CBL scans resulted in significantly different SEC rates from some of the plots. This was due to the CBL measuring areas missed by the SET. The greater number of points measured by CBL (~ 30,000 vs 36) increased precision and lowered standard error. The traditional SET/rSET method is currently 3–10 × cheaper than the 210 Pb or CBL method, respectively, and can accurately track changes in forest floor elevation. Costs of the use of LiDAR are likely to decrease in the future with the advent of newer and more cost-effective technology.

Estuaries and Coasts↗

USGS1989

Performance and utility of satellite telemetry during field studies of free-ranging polar bears in Alaska

Satellite telemetry technology has been used during field studies of polar bears in Alaska since 1985. A total of 109 Platform Transmitter Terminals (PTT) have been deployed on free-ranging female polar bears that seasonally inhabit waters adjacent to the Alaskan coast. The PTTs transmitted locational and sensor data to TIROS-N polar-orbiting satellites during a duty cycle of 12 hours on/60 hours off in 1985, 1986, and 1987. Expected battery life was 13.8 months, and collars were normally removed and replaced with new or refurbished PTTs at 11-13 month intervals. Duty cycles were altered to 7-8 hours on/64-65 hours off in 1988 to prolong expected battery life to 19-21 months. Sensor data transmitted included PTT internal temperature, short term activity counts recorded at 60 second intervals, and long term activity counts for the preceding 24 or 72-hour period. Early failures of PTTs to fix location (less than 75% of expected battery life) were as high as 53% during 198501986. Subsequent improvements in battery design, including better shock insulation, improved electronic, and an improved battery system have reduced early failures to 27% in 1987-1988. The harsh environment and the degree of abuse observed in recovered collars indicate that an unavoidable failure rate of 8-10% is inherent within 60 days after deployment on polar bears. A total of 18,000 locations and 201,000 sensor messages were received from female polar bears between May 1985 and June 1988. Polar bears that were marked in Alaskan waters have been located as far south as 60°N 168°W, and as far east as 70°N 127°W in the Beaufort Sea. Polar bears in the Beaufort Sea are shared with Canada, while polar bears in the Chukchi and Bering seas are shared with the Soviet Union. The international ranges of the two hypothesized populations have been documented. Satellite telemetry has detailed the large movement patterns of polar bear over these vast areas that were previously not available using other techniques.

Alaska↗

USGS2016

Direct photolysis rates and transformation pathways of the lampricides TFM and niclosamide in simulated sunlight

The lampricides 3-trifluoromethyl-4-nitrophenol (TFM) and 2′,5-dichloro-4′-nitrosalicylanilide (niclosamide) are directly added to many tributaries of the Great Lakes that harbor the invasive parasitic sea lamprey. Despite their long history of use, the fate of lampricides is not well understood. This study evaluates the rate and pathway of direct photodegradation of both lampricides under simulated sunlight. The estimated half-lives of TFM range from 16.6 ± 0.2 h (pH 9) to 32.9 ± 1.0 h (pH 6), while the half-lives of niclosamide range from 8.88 ± 0.52 days (pH 6) to 382 ± 83 days (pH 9) assuming continuous irradiation over a water depth of 55 cm. Both compounds degrade to form a series of aromatic intermediates, simple organic acids, ring cleavage products, and inorganic ions. Experimental data were used to construct a kinetic model which demonstrates that the aromatic products of TFM undergo rapid photolysis and emphasizes that niclosamide degradation is the rate-limiting step to dehalogenation and mineralization of the lampricide. This study demonstrates that TFM photodegradation is likely to occur on the time scale of lampricide applications (2–5 days), while niclosamide, the less selective lampricide, will undergo minimal direct photodegradation during its passage to the Great Lakes.

Environmental Science & Technology↗

USGS1981

Organic geochemistry in the Deep Sea Drilling Project

Since the beginning of the Deep Sea Drilling Project DSDP in 1968 and extending through 1975 organic geochemical studies have been undertaken on about 2300 samples recovered on Legs I through 44 from sediments beneath the ocean floors These studies have provided fundamental information regarding the distribution of carbon in oceanic sediments and have yielded a better understanding of the processes that alter and transform organic matter in the marine environment. Beginning with Leg 38 organic geochemists have been included as members of the scientific staffs of those legs of particular organic geochemical interest They have advised operations personnel on matters concerning potential hazards such as drilling into significant accumulations of oil and gas and have collected samples for the scientific community The shipboard organic geochemical laboratory is equipped with sophisticated instrumentation to provide those meassurements helpful in advising the drilling operation. Since Leg 15 samples for organic geochemical studies have been maintained at 180Cat the DSDP sample repository at the Scripps Institution of Oceanography La Jolla California Samples aredistributed to the scientific community but at least one quarter of all cores is retained for possible future studies. Organic geochemical studie sgenerally relate to one of these topic areas (I) petroleum potential source rock evaluation (2) thermal history and gradients (3) diagenesis (4) gas hydrates (5) novel geochemical fossils (6) sources of organic materials (7) paleo depositional environments and (8) geochronology Much of the organic geochemical work on hydrocarbons and kerogen has been directed to the potential of sediments as sources of petroleum The organic matter found thus far during drilling is dominantly of terrestrial origin and thermally immature but much of the organic matter could be a potential source of petroleum mainly gas if buried more deeply. Three new technologies will help advance organic geochemical knowledge of ocean sediments I pressure core barrel for evaluation of gas hydrates 2 hydraulic piston core to study in detail sources and early diagenesis of organic matter and 3 riser for the study of late diagenesis and catagenesis

Society of Economic Geologists Special Publication↗

USGS2020

Atmospheric processing of iron-bearing mineral dust aerosol and its effect on growth of a marine diatom, Cyclotella meneghiniana

Iron (Fe) is a growth-limiting micronutrient for phytoplankton in major areas of oceans and deposited wind-blown desert dust is a primary Fe source to these regions. Simulated atmospheric processing of four mineral dust proxies and two natural dust samples followed by subsequent growth studies of the marine planktic diatom Cyclotella meneghiniana in artificial sea-water (ASW) demonstrated higher growth response to ilmenite (FeTiO 3 ) and hematite (α-Fe 2 O 3 ) mixed with TiO 2 than hematite alone. The processed dust treatment enhanced diatom growth owing to dissolved Fe (DFe) content. The fresh dust-treated cultures demonstrated growth enhancements without adding such dissolved Fe. These significant growth enhancements and dissolved Fe measurements indicated that diatoms acquire Fe from solid particles. When diatoms were physically separated from mineral dust particles, the growth responses become smaller. The post-mineralogy analysis of mineral dust proxies added to ASW showed a diatom-induced increased formation of goethite, where the amount of goethite formed correlated with observed enhanced growth. The current work suggests that ocean primary productivity may not only depend on dissolved Fe but also on suspended solid Fe particles and their mineralogy. Further, the diatom C. meneghiniana benefits more from mineral dust particles in direct contact with cells than from physically impeded particles, suggesting the possibility for alternate Fe-acquisition mechanism/s.

Environmental Science & Technology↗

USGS2014

Detailed north-south cross section showing environments of deposition, organic richness, and thermal maturities of lower Tertiary rocks in the Uinta Basin, Utah

The Uinta Basin of northeast Utah has produced large amounts of hydrocarbons from lower Tertiary strata since the 1960s. Recent advances in drilling technologies, in particular the development of efficient methods to drill and hydraulically fracture horizontal wells, has spurred renewed interest in producing hydrocarbons from unconventional low-permeability dolomite and shale reservoirs in the lacustrine, Eocene Green River Formation. The Eocene Green River Formation was deposited in Lake Uinta, a long-lived saline lake that occupied the Uinta Basin, the Piceance Basin to the east, and the intervening Douglas Creek arch. The focus of recent drilling activity has been the informal Uteland Butte member of the Green River Formation and to a much lesser extent the overlying R-0 oil shale zone of the Green River Formation. Initial production rates ranging from 500 to 1,500 barrels of oil equivalent per day have been reported from the Uteland Butte member from horizontal well logs that are as long as 4,000 feet (ft);. The cross section presented here extends northward from outcrop on the southern margin of the basin into the basin’s deep trough, located just south of the Uinta Mountains, and transects the area where this unconventional oil play is developing. The Monument Butte field, which is one of the fields located along this line of section, has produced hydrocarbons from conventional sandstone reservoirs in the lower part of the Green River Formation and underlying Wasatch Formation since 1981. A major fluvial-deltaic system entered Lake Uinta from the south, and this new line of section is ideal for studying the effect of the sediments delivered by this drainage on hydrocarbon reservoirs in the Green River Formation. The cross section also transects the Greater Altamont-Bluebell field in the deepest part of the basin, where hydrocarbons have been produced from fractured, highly overpressured marginal lacustrine and fluvial reservoirs in the Green River, Wasatch, and North Horn Formations since 1970. Datum for the cross section is sea level so that hydrocarbon source rocks and reservoir rocks could be integrated into the structural framework of the basin.

Utah↗

USGS2000

Cytochrome P450 1A expression in midwater fishes: Potential effects of chemical contaminants in remote oceanic zones

Cytochrome P450 1A (CYP1A) induction is a robust marker for exposure to polynuclear aromatic hydrocarbons and planar halogenated aromatic hydrocarbons that are aryl hydrocarbon receptor agonists. We examined CYP1A expression in mesopelagic fishes from the western North Atlantic. Individuals in 22 species were obtained from slope water and the Sargasso Sea in 1977, 1978, and 1993. Aryl hydrocarbon hydroxylase (AHH), a CYP1A activity, was detected in liver from all species in 1977/78. In some, including Gonostoma elongatum, AHH was inhibited by the CYP1A inhibitor ??-naphthoflavone. CYP1A-dependent ethoxyresorufin O-deethylase (EROD) was detected in liver microsomes of all species in 1993; rates were highest in G. elongatum and Argyropelecus aculeatus. Immunoblot analysis with the CYP1A-specific monoclonal antibody 1-12-3 detected a single microsomal protein band in most 1993 samples; the highest content was in G. elongatum. Immunohistochemical analysis showed CYP1A staining in gill, heart, kidney, and/or liver of several species. Extracts of the 1993 G. elongatum and A. aculeatus, when applied to fish hepatoma cells (PLHC-1) in culture, elicited a significant induction of EROD in those cells. The capacity of the extracts to induce CYP1A correlated with the content of PCBs measured in the same fish (2-4.6 ng/g total body weight). Mesopelagic fish in the western North Atlantic, which experience no direct exposure to surface waters or sediments, are exposed chronically to inducers of CYP1A at levels that appear to be biochemically active in those fish.Cytochrome P450 1A (CYP1A) induction is a robust marker for exposure to polynuclear aromatic hydrocarbons and planar halogenated aromatic hydrocarbons that are awl hydrocarbon receptor agonists. We examined CYP1A expression in mesopelagic fishes from the western North Atlantic. Individuals in 22 species were obtained from slope water and the Sargasso Sea in 1977, 1978, and 1993. Aryl hydrocarbon hydroxylase (AHH), a CYP1A activity, was detected in liver from all species in 1977/78. In some, including Gonostoma elongatum, AHH was inhibited by the CYP1A inhibitor ??-naphthoflavone. CYP1A-dependent ethoxyresorufin O-deethylase (EROD) was detected in liver microsomes of all species in 1993; rates were highest in G. elongatum and Argyropelecus aculeatus. Immunoblot analysis with the CYP1A-specific monoclonal antibody 1-12-3 detected a single microsomal protein band in most 1993 samples; the highest content was in G. elongatum. Immunohistochemical analysis showed CYP1A staining in gill, heart, kidney, and/or liver of several species. Extracts of the 1993 G. elongatum and A. aculeatus, when applied to fish hepatoma cells (PLHC-1) in culture, elicited a significant induction of EROD in those cells. The capacity of the extracts to induce CYP1A correlated with the content of PCBs measured in the same fish (2-4.6 ng/g total body weight). Mesopelagic fish in the western North Atlantic, which experience no direct exposure to surface waters or sediments, are exposed chronically to inducers of CYP1A at levels that appear to be biochemically active in those fish.

Environmental Science & Technology↗

USGS2024

Multigenerational, indirect exposure to pyrethroids demonstrates potential compensatory response and reduced toxicity at higher salinity in estuarine fish

Estuarine environments are critical to fish species and serve as nurseries for developing embryos and larvae. They also undergo daily fluctuations in salinity and act as filters for pollutants. Additionally, global climate change (GCC) is altering salinity regimes within estuarine systems through changes in precipitation and sea level rise. GCC is also likely to lead to an increased use of insecticides to prevent pests from damaging agricultural crops as their habitats and mating seasons change from increased temperatures. This underscores the importance of understanding how insecticide toxicity to fish changes under different salinity conditions. In this study, larval Inland Silversides ( Menidia beryllina ) were exposed to bifenthrin (1.1 ng/L), cyfluthrin (0.9 ng/L), or cyhalothrin (0.7 ng/L) at either 6 or 10 practical salinity units (PSU) for 96 h during hatching, with a subset assessed for end points relevant to neurotoxicity and endocrine disruption by testing behavior, gene expression of a select suite of genes, reproduction, and growth. At both salinities, directly exposed F0 larvae were hypoactive relative to the F0 controls; however, the indirectly exposed F1 larvae were hyperactive relative to the F1 control. This could be evidence of a compensatory response to environmentally relevant concentrations of pyrethroids in fish. Effects on development, gene expression, and growth were also observed. Overall, exposure to pyrethroids at 10 PSU resulted in fewer behavioral and endocrine disruptive effects relative to those observed in organisms at 6 PSU.

Environmental Science and Technology↗

USGS2005

Murre eggs ( Uria aalge and Uria lomvia ) as indicators of mercury contamination in the Alaskan marine environment

Sixty common murre ( Uria aalge ) and 27 thick-billed murre ( Uria lomvia ) eggs collected by the Seabird Tissue Archival and Monitoring Project (STAMP) in 1999−2001 from two Gulf of Alaska and three Bering Sea nesting colonies were analyzed for total mercury (Hg) using isotope dilution cold vapor inductively coupled mass spectrometry. Hg concentrations (wet mass) ranged from 0.011 μg/g to 0.357 μg/g (relative standard deviation = 76%), while conspecifics from the same colonies and years had an average relative standard deviation of 33%. Hg levels in eggs from the Gulf of Alaska (0.166 μg/g ± 0.011 μg/g) were significantly higher ( p < 0.0001) than in the Bering Sea (0.047 μg/g ± 0.004 μg/g). Within the Bering Sea, Hg was significantly higher ( p = 0.0007) in eggs from Little Diomede Island near the arctic than at the two more southern colonies. Although thick-billed and common murres are ecologically similar, there were significant species differences in egg Hg concentrations within each region ( p < 0.0001). In the Bering Sea, eggs from thick-billed murres had higher Hg concentrations than eggs from common murres, while in the Gulf of Alaska, common murre eggs had higher concentrations than those of thick-billed murres. A separate one-way analysis of variance on the only time−trend data currently available for a colony (St. Lazaria Island in the Gulf of Alaska) found significantly lower Hg concentrations in common murre eggs collected in 2001 compared to 1999 ( p = 0.017). Results from this study indicate that murre eggs may be effective monitoring units for detecting geographic, species, and temporal patterns of Hg contamination in marine food webs. The relatively small intracolony variation in egg Hg levels and the ability to consistently obtain adequate sample sizes both within and among colonies over a large geographic range means that monitoring efforts using murre eggs will have suitable statistical power for detecting environmental patterns of Hg contamination. The potential influences of trophic effects, physical transport patterns, and biogeochemical processes on these monitoring efforts are discussed, and future plans to investigate the sources of the observed variability are presented.

Environmental Science & Technology↗

USGS2019

India National Gas Hydrate Program Expedition-02: Operational and technical summary

The India National Gas Hydrate Program is being steered by the government of India's Ministry of Petroleum and Natural Gas (MoPNG) with participation of Directorate General of Hydrocarbons (DGH), Oil and Natural Gas Corporation Limited (ONGC), and the National Oil Companies and Research Institutes of India. The India National Gas Hydrate Program Expedition 01 (NGHP-01) established the presence of gas hydrate in the Krishna Godavari (KG) and Mahanadi Basins and in the offshore area of the Andaman Sea Basin. However, the gas hydrates discovered during NGHP-01 were mainly distributed as fracture-filling material in fine-grained clay-rich sediments. The India National Gas Hydrate Program Expedition 02 (NGHP-02) was carried out with an objective to discover gas hydrate in sand-rich sediment along the eastern offshore margin of India. ONGC planned and executed NGHP-02 on the behalf of the MoPNG. NGHP-02 started on March 3, 2015 and was completed on July 28, 2015 (total 147 days) using the Japanese scientific Drilling Vessel Chikyu (D/V Chikyu). During NGHP-02, 42 holes at 25 sites were drilled, cored, and/or surveyed with downhole logging tools. These sites were located in four areas along the eastern margin of India and formally named Area A (Mahanadi Basin, three sites), Area B (northern part of the KG-Basin, twelve sites), Area C (central part of the KG-Basin, six sites), and Area E (southern part to the KG-Basin, four sites). All 25 sites established during NGHP-02 were first drilled and logged with logging-while-drilling (LWD) tools and an additional 17 holes were then drilled and/or cored with conventional coring tools (HPCS/ESCS) or pressure coring tools (PCTB). Wireline logging was conducted in 10 holes and formation tests using a dual packer Modular Formation Dynamics Tester (MDT) tool were carried out in two holes. The onboard science team used the laboratory facilities on the D/V Chikyu to examine and analyse the physical properties, geochemistry, and sedimentology of all the cores collected during the expedition. Core samples were also analysed in additional post-expedition shore-based studies conducted in numerous domestic and international gas hydrate research laboratories. The NGHP-02 sediment cores were archived at the National Gas Hydrate Core Repository in Mumbai (India), which is associated with the ONGC Gas Hydrate Research and Technology Centre (GHRTC). The necessary data for characterizing the occurrence of gas hydrate, such as interstitial water chlorinities, core-derived gas chemistry, physical and sedimentological properties, thermal images of the recovered cores, pressure core and downhole measured logging data (LWD and/or conventional wireline log data), were obtained from most of the drill sites established during NGHP-02. Almost all the drill sites yielded evidence for the occurrence of gas hydrate; however, the inferred in situ concentration of gas hydrate varied substantially from site to site. For the most part, the interpretation of downhole logging data, core thermal images, interstitial water analyses, and pressure core images from the sites established during NGHP-02 indicate that the occurrence of concentrated gas hydrate is mostly associated with coarser grained (sand-rich) sediments. This paper presents the operational and technical summary of NGHP-02. NGHP-02 started on March 3, 2015 and was completed on July 28, 2015 (total 147 days) using the Japanese scientific Drilling Vessel Chikyu (D/V Chikyu). During NGHP-02, 42 holes at 25 sites were drilled, cored, and/or surveyed with downhole logging tools. These sites were located in four areas along the eastern margin of India and formally named Area A (Mahanadi Basin, three sites), Area B (northern part of the KG-Basin, twelve sites), Area C (central part of the KG-Basin, six sites), and Area E (southern part to the KG-Basin, four sites). All 25 sites established during NGHP-02 were first drilled and logged with logging-while-drilling (LWD) to

Journal of Marine and Petroleum Geology↗

USGS2010

Archive of digital Chirp sub-bottom profile data collected during USGS Cruise 07SCC01 offshore of the Chandeleur Islands, Louisiana, June 2007

In June of 2007, the U.S. Geological Survey (USGS) conducted a geophysical survey offshore of the Chandeleur Islands, Louisiana, in cooperation with the Louisiana Department of Natural Resources (LDNR) as part of the USGS Barrier Island Comprehensive Monitoring (BICM) project. This project is part of a broader study focused on Subsidence and Coastal Change (SCC). The purpose of the study was to investigate the shallow geologic framework and monitor the enviromental impacts of Hurricane Katrina (Louisiana landfall was on August 29, 2005) on the Gulf Coast's barrier island chains. This report serves as an archive of unprocessed digital 512i and 424 Chirp sub-bottom profile data, trackline maps, navigation files, Geographic Information System (GIS) files, Field Activity Collection System (FACS) logs, observer's logbook, and formal Federal Geographic Data Committee (FGDC) metadata. Gained (a relative increase in signal amplitude) digital images of the seismic profiles are also provided. Refer to the Acronyms page for expansion of acronyms and abbreviations used in this report. The USGS St. Petersburg Coastal and Marine Science Center (SPCMSC) assigns a unique identifier to each cruise or field activity. For example, 07SCC01 tells us the data were collected in 2007 for the Subsidence and Coastal Change (SCC) study and the data were collected during the first field activity for that study in that calendar year. Refer to http://walrus.wr.usgs.gov/infobank/programs/html/definition/activity.html for a detailed description of the method used to assign the field activity identification (ID). All Chirp systems use a signal of continuously varying frequency; the Chirp systems used during this survey produce high resolution, shallow penetration profile images beneath the seafloor. The towfish is a sound source and receiver, which is typically towed 1 - 2 m below the sea surface. The acoustic energy is reflected at density boundaries (such as the seafloor or sediment layers beneath the seafloor), detected by a receiver, and recorded by a PC-based seismic acquisition system. This process is repeated at timed intervals (for example, 0.125 s) and recorded for specific intervals of time (for example, 50 ms). In this way, a two-dimensional vertical image of the shallow geologic structure beneath the ship track is produced. Figure 1 displays the acquisition geometry. Refer to table 1 for a summary of acquisition parameters. See the digital FACS equipment log (11-KB PDF) for details about the acquisition equipment used. Table 2 lists trackline statistics. Scanned images of the handwritten FACS logs and handwritten science logbook (449-KB PDF) are also provided. The archived trace data are in standard Society of Exploration Geophysicists (SEG) SEG-Y rev 1 format (Norris and Faichney, 2002); ASCII character encoding is used for the first 3,200 bytes of the card image header instead of the SEG-Y rev 0 (Barry and others, 1975) EBCDIC format. The SEG-Y files may be downloaded and processed with commercial or public domain software such as Seismic Unix (SU) (Cohen and Stockwell, 2010). See the How To Download SEG-Y Data page for download instructions. The web version of this archive does not contain the SEG-Y trace files. These files are very large and would require extremely long download times. To obtain the complete DVD archive, contact USGS Information at 1-888-ASK-USGS or infoservices@usgs.gov. The printable profiles provided here are GIF images that were processed and gained using SU software; refer to the Software page for links to example SU processing scripts and USGS software for viewing the SEG-Y files (Zihlman, 1992). The processed SEG-Y data were also exported to Chesapeake Technology, Inc. (CTI) SonarWeb software to produce an interactive version of the profile that allows the user to obtain a geographic location and depth from the profile for a given cursor position. This information is displayed in the status bar of the browser.

Louisiana↗

USGS2008

Thiamine Deficiency Complex Workshop final report: November 6-7, 2008, Ann Arbor, MI

Fry mortality which was first observed in the late 1960s in Great Lakes salmonines and in Baltic Sea salmon in 1974 has now been linked to thiamine deficiency (historically referred to as Early Mortality Syndrome, or EMS and M74, respectively). Over the past 14 years significant strides have been made in our understanding of this perplexing problem. It is now known that thiamine deficiency causes embryonic mortality in these salmonids. Both overt mortality and secondary effects of thiamine deficiency are observed in juvenile and adult animals. Collectively the morbidity and mortality (fry and adult mortality, secondary metabolic and behavior affects in juveniles and adult fish) are referred to as Thiamine Deficiency Complex (TDC). A workshop was held in Ann Arbor, MI on 6-7 November 2008 that brought together 38 federal, state, provincial, tribal and university scientists to share information, present data and discuss the latest observations on thiamine status of aquatic animals with thiamine deficiency and the causative agent, thiaminase. Twenty presentations (13 oral and 7 posters) detailed current knowledge. In Lake Huron, low alewife Alosa pseudoharengus abundance has persisted and egg thiamine concentrations in salmonines continue to increase, along with evidence of natural reproduction in lake trout Salvelinus namaycush. Lake Michigan Chinook salmon Oncorhynchus tshawytscha appear to have a lower thiamine requirement than other salmonids in the lake. Lake Ontario American eel Anguilla rostrata foraging on alewife have approximately one third the muscle thiamine compared to eels not feeding on alewife, suggesting that eels may be suffering from thiamine deficiency. Secondary effects of low thiamine exist in Great Lakes salmonines and should not be ignored. Thiaminase activity in dreissenid mussels is extremely high but a connection to TDC has not been made. Thiaminase in net plankton was found more consistently in lakes Michigan and Ontario than other lakes evaluated. The biological role of thiaminase I, associated with thiamine deficiency, remains to be determined whereas thiaminase II has been reported to be part of a salvage pathway leading to thiamine synthesis. The use of gene array technology and 3-dimensional histology is adding new understanding to the affects of thiamine deficiency. Research is needed to determine the thiamine status of species feeding on dreissenids, the environmental sources of thiaminase and the biological role of thiaminase I.

Research Status Report↗

USGS2002

Design and performance of a horizontal mooring for upper-ocean research

This paper describes the design and performance of a two-dimensional moored array for sampling horizontal variability in the upper ocean. The mooring was deployed in Massachusetts Bay in a water depth of 84 m for the purpose of measuring the horizontal structure of internal waves. The mooring was instrumented with three acoustic current meters (ACMs) spaced along a 170-m horizontal cable that was stretched between two subsurface buoys 20 m below the sea surface. Five 25-m-long vertical instrument strings were suspended from the horizontal cable. A bottom-mounted acoustic Doppler current profiler (ADCP) was deployed nearby to measure the current velocity throughout the water column. Pressure sensors mounted on the subsurface buoys and the vertical instrument strings were used to measure the vertical displacements of the array in response to the currents. Measurements from the ACMs and the ADCP were used to construct time-dependent, two-dimensional current fields. The current fields were used as input to a numerical model that calculated the deformation of the array with respect to the nominal zero-current configuration. Comparison of the calculated vertical offsets of the downstream subsurface buoy and downstream vertical instrument string with the pressure measurements were used to verify the numerical code. These results were then used to estimate total deformation of the array due to the passage of the internal waves. Based on the analysis of the three internal wave events with the highest measured vertical offsets, it is concluded that the geometry of the main structure (horizontal cable and anchor legs) was kept to within ±2.0 m, and the geometry of the vertical instrument strings was kept to within ±4.0 m except for one instance when the current velocity reached 0.88 m s −1 .

Massachusetts↗

USGS2014

Reconstruction of historic sea ice conditions in a sub-Arctic lagoon

Historical sea ice conditions were reconstructed for Izembek Lagoon, Bering Sea, Alaska. This lagoon is a crucial staging area during migration for numerous species of avian migrants and a major eelgrass ( Zostera marina ) area important to a variety of marine and terrestrial organisms, especially Pacific Flyway black brant geese ( Branta bernicla nigricans ). Ice cover is a common feature of the lagoon in winter, but appears to be declining, which has implications for eelgrass distribution and abundance, and its use by wildlife. We evaluated ice conditions from a model based on degree days, calibrated to satellite observations, to estimate distribution and long-term trends in ice conditions in Izembek Lagoon. Model results compared favorably with ground observations and 26 years of satellite data, allowing ice conditions to be reconstructed back to 1943. Specifically, periods of significant (limited access to eelgrass areas) and severe (almost complete ice coverage of the lagoon) ice conditions could be identified. The number of days of severe ice within a single season ranged from 0 (e.g., 2001) to ≥ 67 (e.g., 2000). We detected a slight long-term negative trend in ice conditions, superimposed on high inter-annual variability in seasonal aggregate ice conditions. Based on reconstructed ice conditions, the seasonally cumulative number of significant or severe ice days correlated linearly with mean air temperature from January until March. Further, air temperature at Izembek Lagoon was correlated with wind direction, suggesting that ice conditions in Izembek Lagoon were associated with synoptic-scale weather patterns. Methods employed in this analysis may be transferable to other coastal locations in the Arctic.

Alaska↗

USGS2013

Borehole-explosion and air-gun data acquired in the 2011 Salton Seismic Imaging Project (SSIP), southern California: description of the survey

The Imperial and Coachella Valleys are being formed by active plate-tectonic processes. From the Imperial Valley southward into the Gulf of California, plate motions are rifting the continent apart. In the Coachella Valley, the plates are sliding past one another along the San Andreas and related faults (fig. 1). These processes build the stunning landscapes of the region, but also produce damaging earthquakes. Rupture of the southern section of the San Andreas Fault (SAF), from the Coachella Valley to the Mojave Desert, is believed to be the greatest natural hazard that California will face in the near future. With an estimated magnitude between 7.2 and 8.1, such an event would result in violent shaking, loss of life, and disruption of infrastructure (freeways, aqueducts, power, petroleum, and communication lines) that might bring much of southern California to a standstill. As part of the nation’s efforts to avert a catastrophe of this magnitude, a number of projects have been undertaken to more fully understand and mitigate the effects of such an event. The Salton Seismic Imaging Project (SSIP), funded jointly by the National Science Foundation (NSF) and the U.S. Geological Survey (USGS), seeks to understand, through seismic imaging, the structure of the Earth surrounding the SAF, including the sedimentary basins on which cities are built. The principal investigators (PIs) of this collaborative project represent the USGS, Virginia Polytechnic Institute and State University (Virginia Tech), California Institute of Technology (Caltech), Scripps Institution of Oceanography (Scripps), University of Nevada, Reno (UNR), and Stanford University. SSIP will create images of underground structure and sediments in the Imperial and Coachella Valleys and adjacent mountain ranges to investigate the earthquake hazards posed to cities in this area. Importantly, the images will help determine the underground geometry of the SAF, how deep the sediments are, and how fast earthquake energy can travel through the sediments. All of these factors determine how hard the earth will shake during a major earthquake. If we can improve on our understanding of how and where earthquakes will occur, and how strong their resultant shaking will be, then buildings can be designed or retrofitted accordingly in order to resist damage and collapse, and emergency plans can be adequately prepared. In addition, SSIP will investigate the processes of rifting and magmatism in the Salton Trough in order to better understand this important plate-boundary region. The Salton Trough is a unique rift in that subsidence is accompanied by huge influxes of infilling sediment from the Colorado River. Volcanism that accompanies the subsidence here is muted by these influxes of sediment. The Salton Trough, in the central part of the Imperial Valley, is apparently made up of entirely new crust: young sediment in the upper crust and basaltic intrusive rocks in the mid-to-lower crust (Fuis and others, 1984). Similar to the ultrasound and computed tomography (CT) scans performed by the medical industry, seismic imaging is a collection of techniques that enable scientists to obtain a picture of what is underground. The petroleum industry routinely uses these techniques to search for oil and gas at relatively shallow depths; however, the scope of this project demanded that we image as much as 30 km into the Earth’s crust. This project generated and recorded seismic waves, similar to sound waves, which move downward into the Earth and are bent (refracted) or echoed (reflected) back to the surface. SSIP acquired data in a series of intersecting lines that cover key areas of the Salton Trough. The sources of sound waves were detonations (shots) in deep boreholes, designed to create energy equivalent to magnitude 1–2 earthquakes. The study region routinely experiences earthquakes of these magnitudes, but earthquakes are not located in such a way as to permit us to create the detailed images we need for earthquake hazard assessment. Air gun bursts, generated in the Salton Sea along extensions of our onshore seismic lines, also were utilized as sound-wave sources. Temporary deployments of portable land seismometers, as well as ocean-bottom seismometers (OBSs) on the floor of the Salton Sea, recorded the energy from the land shots and air gun bursts. SSIP is similar to the Los Angeles Regional Seismic Experiments of 1994 and 1999 (LARSE I and II, respectively; Murphy and others, 1996; Fuis and others, 2001). The LARSE surveys demonstrated that the USGS and collaborators can safely and effectively conduct seismic imaging surveys in urban and nonurban areas, on lands owned and/or managed by many different types of agencies and entities. Information was produced that could not have been obtained any other way, and this information was key to changing the leading ideas about earthquake hazards at that time in the Los Angeles region. These surveys produced no significant environmental impact or damage to structures, and they did not trigger earthquakes.

California↗

USGS1993

Interaction of rising frazil with suspended particles: Tank experiments with applications to nature

Widespread occurrence of sediment-laden (turbid) sea ice and high concentrations of diatoms and foraminifers in ice have recently been reported from both polar regions. Many possible mechanisms of particle entrainment into ice have been postulated, among which scavenging by rising frazil ice and nucleation or adhesion of ice onto suspended particles appear to be the most likely ones. No reliable experimental data on the mechanisms, however, are available. Because of the importance of turbid ice for sediment transport, tanks for laboratory-scale experiments were constructed, in which frazil crystals produced at the base were monitored rising through water column laden with various types of particulate matter, including plankton. Observations made in salt water are reported here. Over a distance of 1.5 m, frazil < 1 mm in diameter grew to crystals or flocs several cm in diameter, rising at average velocities of 2 to 3 cm/s. Rise velocities were a function of frazil size, but varied greatly due to interactions of ice particles of different size and velocity and the resulting turbulence. Sand-size particles could be either trapped permanently by rising frazil, or were temporarily supported and again released. With live plankton, a several-fold enrichment of ice occurred, suggesting that their irregular shapes or appendages were caught by ice flocs. Diatom- and foram tests were also relatively effectively trapped. The concentration of silt- and clay-size terrigenous detritus in frazil tended to increase relative to the water. We found no preferential sorting by ice in this size range. Various kinds of evidence showed that ice does not nucleate onto foreign particles, and has no adhesive properties. Foreign material resided in the interstices of crystal aggregates, and particles denser than water could be released by agitation, suggesting that scavenging is a mechanical process. With rising frazil, the settling of particulate matter therefore is either retarded or reversed, resulting in a net upward sediment flux and a sediment-laden ice cover from this process of suspension freezing.

Cold Regions Science and Technology↗

USGS2006

Reserve Growth in Oil Fields of West Siberian Basin, Russia

Although reserve (or field) growth has proven to be an important factor contributing to new reserves in mature petroleum basins, it is still a poorly understood phenomenon. Limited studies show that the magnitude of reserve growth is controlled by several major factors, including (1) the reserve booking and reporting requirements in each country, (2) improvements in reservoir characterization and simulation, (3) application of enhanced oil recovery techniques, and (4) the discovery of new and extensions of known pools in discovered fields. Various combinations of these factors can affect the estimates of proven reserves in particular fields and may dictate repeated estimations of reserves during a field's life. This study explores the reserve growth in the 42 largest oil fields in the West Siberian Basin, which contain about 55 percent of the basin's total oil reserves. The West Siberian Basin occupies a vast swampy plain between the Ural Mountains and the Yenisey River, and extends offshore into the Kara Sea; it is the richest petroleum province in Russia. About 600 oil and gas fields with original reserves of 144 billion barrels of oil (BBO) and more than 1,200 trillion cubic feet of gas (TCFG) have been discovered. The principal oil reserves and most of the oil fields are in the southern half of the basin, whereas the northern half contains mainly gas reserves. Sedimentary strata in the basin consist of Upper Triassic through Tertiary clastic rocks. Most oil is produced from Neocomian (Lower Cretaceous) marine to deltaic sandstone reservoirs, although substantial oil reserves are also in the marine Upper Jurassic and continental to paralic Lower to Middle Jurassic sequences. The majority of oil fields are in structural traps, which are gentle, platform-type anticlines with closures ranging from several tens of meters to as much as 150 meters (490 feet). Fields producing from stratigraphic traps are generally smaller except for the giant Talin field which contains oil in Jurassic river-valley sandstones. Principal source rocks are organic-rich marine shales of the Volgian (uppermost Jurassic) Bazhenov Formation, which is 30-50 m (98- 164 feet) thick. Bazhenov-derived oils are mostly of medium gravity, and contain 0.8-1.3 percent sulfur and 2-5 percent paraffin. Oils in the Lower to Middle Jurassic clastics were sourced from lacustrine and estuarine shales of the Toarcian Togur Bed. These oils are medium to low gravity, with low sulfur (less than 0.25 percent) and high paraffin (commonly to 10 percent) contents. Among the 42 fields analyzed for reserve growth, 30 fields are located in the Middle Ob region, which includes the Samotlor field with reserves of more than 25 BBO and the Fedorov field with reserves of about 5 BBO. Data used in the study include year of discovery, year of first production, annual and cumulative production, and remaining reserves reported by Russian reserve categories (A+B+C1 and C2) in January of each year. Correlation of these Russian resource categories to U.S. categories of the Society of Petroleum Engineers classification is complex and somewhat uncertain. Reserve growth in oil fields of West Siberia was calculated using a newly developed Group Growth method, which requires that the total reserve (proven reserve plus cumulative production) of individual fields with an equal length of reserve record be added together starting with discovery year or the first production year. Then the annual growth factor (AGF), which is the ratio of total reserves of two consecutive years, is calculated for all years. Once AGFs have been calculated, the cumulative growth factor (CGF) is calculated by multiplying the AGFs of all the previous years. The CGF data are used to develop reserve growth models. The West Siberian oil fields show a 13-fold reserve growth 20 years after the discovery year and only about a 2-fold growth after the first production year. This difference is attributed to extensive exploration and field delineation activities between the discovery and the first production years. Because of uncertainty in the length of evaluation time and in reported reserves during this initial period, reserve growth based on the first production year is more reliable for model development. However, reserve growth models based both on discovery year and first production year show rapid growth in the first few years and slower growth in the following years. In contrast, the reserve growth patterns for the conterminous United States and offshore Gulf of Mexico show a steady reserve increase throughout the productive lives of the fields. The different reserve booking requirements and the lack of capital investment for improved reservoir management and production technologies in West Siberian fields relative to U.S. fields are the probable causes for the difference in growth patterns. Reserve growth models based on the first production year predict that the reserve growth potential in the 42 largest oil fields of West Siberia over a five-year period (1998-2003) ranges from 270-330 million barrels or 0.34-0.42 percent per year. For a similar five-year period (1996-2001), models for the conterminous United States predict a growth of 0.54-0.75 percent per year. This abstract presents the contents of a poster prepared for the AAPG Hedberg Research Conference on Understanding World Oil Resources, November 12-17, 2006 - Colorado Springs, Colorado. A paper 'Reserve Growth in Oil Fields of West Siberian Basin, Russia' was published in Natural Resources Research, v. 12, no. 2, June, 2003.

Open-File Report↗