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At least 181 records · Page 10Linked to original sources
USGS2021

Small shorebirds feast on green slime to fuel their long migration

Shorebirds wade in shallow waters along shorelines searching for food. More than a million shorebirds visit the San Francisco Estuary each year during their migration to feast on the insects, worms, clams, and crabs that live on or under the surface of the sand or mud. The abundant food in the Estuary provides shorebirds with the energy they need to migrate thousands of kilometers, between their breeding areas in the Arctic and their wintering areas along the Pacific coast of North and South America. Scientists have discovered that, during migration, small species of shorebirds eat a green slime called biofilm that grows on the surface of the mud. Larger shorebirds do not eat biofilm. This article describes how the bills and tongues of small shorebirds help them eat biofilm, what biofilm is, and why biofilm is an important food for those birds during migration.

Frontiers for Young Minds↗
USGS2016

Seasonal flows of international British Columbia-Alaska rivers: The nonlinear influence of ocean-atmosphere circulation patterns

The northern portion of the Pacific coastal temperate rainforest (PCTR) is one of the least anthropogenically modified regions on earth and remains in many respects a frontier area to science. Rivers crossing the northern PCTR, which is also an international boundary region between British Columbia, Canada and Alaska, USA, deliver large freshwater and biogeochemical fluxes to the Gulf of Alaska and establish linkages between coastal and continental ecosystems. We evaluate interannual flow variability in three transboundary PCTR watersheds in response to El Niño-Southern Oscillation (ENSO), Pacific Decadal Oscillation (PDO), Arctic Oscillation (AO), and North Pacific Gyre Oscillation (NPGO). Historical hydroclimatic datasets from both Canada and the USA are analyzed using an up-to-date methodological suite accommodating both seasonally transient and highly nonlinear teleconnections. We find that streamflow teleconnections occur over particular seasonal windows reflecting the intersection of specific atmospheric and terrestrial hydrologic processes. The strongest signal is a snowmelt-driven flow timing shift resulting from ENSO- and PDO-associated temperature anomalies. Autumn rainfall runoff is also modulated by these climate modes, and a glacier-mediated teleconnection contributes to a late-summer ENSO-flow association. Teleconnections between AO and freshet flows reflect corresponding temperature and precipitation anomalies. A coherent NPGO signal is not clearly evident in streamflow. Linear and monotonically nonlinear teleconnections were widely identified, with less evidence for the parabolic effects that can play an important role elsewhere. The streamflow teleconnections did not vary greatly between hydrometric stations, presumably reflecting broad similarities in watershed characteristics. These results establish a regional foundation for both transboundary water management and studies of long-term hydroclimatic and environmental change.

Alaska, British Columbia↗
USGS2021

Complex vulnerabilities of the water and aquatic carbon cycles to permafrost thaw

The spatial distribution and depth of permafrost are changing in response to warming and landscape disturbance across northern Arctic and boreal regions. This alters the infiltration, flow, surface and subsurface distribution, and hydrologic connectivity of inland waters. Such changes in the water cycle consequently alter the source, transport, and biogeochemical cycling of aquatic carbon (C), its role in the production and emission of greenhouse gases, and C delivery to inland waters and the Arctic Ocean. Responses to permafrost thaw across heterogeneous boreal landscapes will be neither spatially uniform nor synchronous, thus giving rise to expressions of low to medium confidence in predicting hydrologic and aquatic C response despite very high confidence in projections of widespread near-surface permafrost disappearance as described in the 2019 Intergovernmental Panel on Climate Change Special Report on the Ocean and Cryosphere in a Changing Climate: Polar Regions. Here, we describe the state of the science regarding mechanisms and factors that influence aquatic C and hydrologic responses to permafrost thaw. Through synthesis of recent topical field and modeling studies and evaluation of influential landscape characteristics, we present a framework for assessing vulnerabilities of northern permafrost landscapes to specific modes of thaw affecting local to regional hydrology and aquatic C biogeochemistry and transport. Lastly, we discuss scaling challenges relevant to model prediction of these impacts in heterogeneous permafrost landscapes.

Arctic↗
USGS2021

Physiomorphic transformation in extreme endurance migrants: Revisiting the case of bar-tailed godwits preparing for trans-pacific flights

In a 1998 paper entitled “Guts don’t fly: small digestive organs in obese bar-tailed godwits,” Piersma and Gill (1998) showed that the digestive organs were tiny and the fat loads huge in individuals suspected of embarking on a non-stop flight from Alaska to New Zealand. It was suggested that prior to migratory departure, these godwits would shrink the digestive organs used during fuel deposition and boost the size and capacity of exercise organs to optimize flight performance. Here we document the verity of the proposed physiomorphic changes by comparing organ sizes and body composition of bar-tailed godwits Limosa lapponica baueri collected in modesty midway during their fueling period (mid-September; fueling, n = 7) with the previously published data for godwits that had just departed on their trans-Pacific flight (October 19; flying, n = 9). Mean total body masses for the two groups were nearly identical, but nearly half of the body mass of fueling godwits consisted of water, while fat constituted over half of total body mass of flying godwits. The two groups also differed in their fat-free mass components. The heart and flight muscles were heavier in fueling godwits, but these body components constituted a relatively greater fraction of the fat-free mass in flying godwits. In contrast, organs related to digestion and homeostasis were heavier in fueling godwits, and most of these organ groups were also relatively larger in fueling godwits compared to flying godwits. These results reflect the functional importance of organ and muscle groups related to energy acquisition in fueling godwits and the consequences of flight-related exertion in flying godwits. The extreme physiomorphic changes apparently occurred over a short time window (≤1 month). We conclude that the inferences made on the basis of the 1998 paper were correct. The cues and stimuli which moderate these changes remain to be studied.

Frontiers in Ecology and Evolution↗
USGS2022

How beavers are changing Arctic landscapes and Earth’s climate

Beavers build dams that change the way water moves between streams, lakes, and the land. In Alaska, beavers are moving north from the forests into the Arctic tundra. When beavers build dams in the Arctic, they cause frozen soil, called permafrost, to thaw. Scientists are studying how beavers and the thawing of permafrost are impacting streams and rivers in Alaska’s national parks. For example, permafrost thaw from beavers can add harmful substances like mercury to streams. Mercury can be taken up by stream food webs, including fish, which then become unhealthy to eat. Permafrost thaw can also move carbon (from dead plants) to beaver ponds. When this carbon decomposes, it can be released from beaver ponds into the air as greenhouse gases, which cause Earth’s climate to warm. Scientists are trying to keep up with these busy beavers to better understand how they are changing Arctic landscapes and Earth’s climate.

Alaska↗
USGS2023

Complex styles of phreatomagmatic explosions at Kīlauea Volcano, Hawaii, controlled by magma structure

Explosive eruptions at basaltic volcanoes remain poorly understood. Kīlauea Volcano is a type locality for basaltic eruptions and is well-known for effusive activity. However, more than 7 m of phreatomagmatic Keanakākoʻi Tephra unit D deposits from explosive eruptions crown the southern rim of the summit caldera and provide a stark reminder of Kīlauea’s explosive past and future potential. We used detailed field observations as well as granulometric and morphological analysis of 100 samples from two proximal sections to assess the eruption style and fragmentation mechanism. The deposits can be divided into four subunits, six different lithofacies, and contain three juvenile tephra components. Each juvenile component shows distinct shape variability resulting from molten fuel-coolant interaction (MFCI) explosions of magma of variable vesicularity. Fragmentation of dense glass generates olive-green ash, fragmentation of low to moderately vesicular magma generates a dark gray ash-lapilli component, and fragmentation of highly vesicular magma generates light-yellow pumice. Our work shows that magma structure impacts MFCI explosion efficiency. Small-scale planar bedding throughout most of the deposit points to a general eruption style of small, frequent explosions generating low plumes. Thicker beds of accretionary lapilli of fine-extremely fine ash are related to very efficient magma-water mixing. Pyroclastic density current (PDC) deposits in the upper part of the stratigraphy contain at least three flows but show no significant dune or cross-bedding structures. We suggest that this is a function of the vent being situated in a caldera that was then ∼600 m deep, where the caldera wall acted as a barrier and changed the flow dynamics to very dilute overspills and co-PDC plume falls over the wall. Deconvolution modeling of the polymodal grain size distributions is used to assess grain size changes of each juvenile component for this deposit, which greatly improves interpretation of lithofacies generation and eruption dynamics. Size-correlated shape parameters show that shape data across a wide size range are needed to accurately track grain shapes. This study demonstrates how careful examination of grain size and shape of juvenile tephra clasts can help volcanologists understand how effusive basaltic volcanoes can become violently explosive.

Hawaii↗
USGS2025

Rare milkvetch (Astragalus) persistence at a utility-scale solar energy facility in the Mojave Desert

Utility-scale solar energy (USSE) development is driving the projected growth in global renewable energy capacity but comes with environmental tradeoffs. New, alternative construction methods are promoted to minimize impacts to soils, vegetation, and hydrology; however, the disturbance created by these methods requires further investigation. We evaluated the population of a rare annual species, threecorner milkvetch ( Astragalus geyeri var. triquetrus ), at the Gemini Solar Project in the Mojave Desert, USA, two years after construction. Gemini was required to minimize disturbance in the threecorner milkvetch habitat, providing a unique opportunity to study the plant population and life history characteristics of a rare plant species under novel construction methods. Our objectives were to compare plant population characteristics of threecorner milkvetch inside and outside the Gemini footprint and in different photovoltaic (PV) panel microsites (interspace, panel dripline, under panel). We hypothesized that 1) threecorner milkvetch would have lower survival, reproduction, and growth, and a later phenology, inside compared to outside the facility, and 2) that these negative effects on plant demography and phenology would intensify with increasing proximity to photovoltaic panels in the solar array due to an increasing effect of disturbance and reduction of light and water availability. The results of this 1-year study during a favorable year of rainfall demonstrate the persistence of a rare Mojave annual plant species within an altered environment at a USSE facility. We found that threecorner milkvetch had an earlier phenology, grew larger, and had a higher fecundity at Gemini compared to plants off-site. Survivorship between the two populations, however, was not significantly different. Although growth and reproductive metrics were not correlated with distance to panel, minimal threecorner milkvetch emergence occurred directly under the PV panels and along their driplines, indicating a potential loss of suitable habitat if this pattern becomes more widespread in space or through time. Novel construction techniques for USSE could be considered moving forward to minimize impact on aboveground vegetation and maintain viable seed banks. The results of this study can assist land managers in making decisions about USSE development as the demand grows.

Nevada↗
USGS2018

Snowmelt timing regulates community composition, phenology, and physiological performance of alpine plants

The spatial patterning of alpine plant communities is strongly influenced by the variation in physical factors such as temperature and moisture, which are strongly affected by snow depth and snowmelt patterns. Earlier snowmelt timing and greater soil-moisture limitations may favor wide-ranging species adapted to a broader set of ecohydrological conditions than alpine-restricted species. We asked how plant community composition, phenology, plant water relations, and photosynthetic gas exchange of alpine-restricted and wide-ranging species differ in their responses to a ca. 40-day snowmelt gradient in the Colorado Rocky Mountains ( Lewisia pygmaea , Sibbaldia procumbens , and Hymenoxys grandiflora were alpine-restricted and Artemisia scopulorum , Carex rupestris , and Geum rossii were wide-ranging species). As hypothesized, species richness and foliar cover increased with earlier snowmelt, due to a greater abundance of wide-ranging species present in earlier melting plots. Flowering initiation occurred earlier with earlier snowmelt for 12 out of 19 species analyzed, while flowering duration was shortened with later snowmelt for six species (all but one were wide-ranging species). We observed >50% declines in net photosynthesis from July to September as soil moisture and plant water potentials declined. Early-season stomatal conductance was higher in wide-ranging species, indicating a more competitive strategy for water acquisition when soil moisture is high. Even so, there were no associated differences in photosynthesis or transpiration, suggesting no strong differences between these groups in physiology. Our findings reveal that plant species with different ranges (alpine-restricted vs. wide-ranging) could have differential phenological and physiological responses to snowmelt timing and associated soil moisture dry-down, and that alpine-restricted species’ performance is more sensitive to snowmelt. As a result, alpine-restricted species may serve as better indicator species than their wide-ranging heterospecifics. Overall, alpine community composition and peak % cover are strongly structured by spatio-temporal patterns in snowmelt timing. Thus, near-term, community-wide changes (or variation) in phenology and physiology in response to shifts in snowmelt timing or rates of soil dry down are likely to be contingent on the legacy of past climate on community structure.

Frontiers in Plant Science↗
USGS2023

Diverse portfolios: Investing in tributaries for restoration of large river fishes in the Anthropocene

Rehabilitation of large Anthropocene rivers requires engagement of diverse stakeholders across a broad range of sociopolitical boundaries. Competing objectives often constrain options for ecological restoration of large rivers whereas fewer competing objectives may exist in a subset of tributaries. Further, tributaries contribute toward building a “portfolio” of river ecosystem assets through physical and biological processes that may present opportunities to enhance the resilience of large river fishes. Our goal is to review roles of tributaries in enhancing mainstem large river fish populations. We present case histories from two greatly altered and distinct large-river tributary systems that highlight how tributaries contribute four portfolio assets to support large-river fish populations: 1) habitat diversity, 2) connectivity, 3) ecological asynchrony, and 4) density-dependent processes. Finally, we identify future research directions to advance our understanding of tributary roles and inform conservation actions. In the Missouri River United States, we focus on conservation efforts for the state endangered lake sturgeon, which inhabits large rivers and tributaries in the Midwest and Eastern United States. In the Colorado River, Grand Canyon United States, we focus on conservation efforts for recovery of the federally threatened humpback chub. In the Missouri River, habitat diversity focused on physical habitats such as substrate for reproduction, and deep-water habitats for refuge, whereas augmenting habitat diversity for Colorado River fishes focused on managing populations in tributaries with minimally impaired thermal and flow regimes. Connectivity enhancements in the Missouri River focused on increasing habitat accessibility that may require removal of physical structures like low-head dams; whereas in the Colorado River, the lack of connectivity may benefit native fishes as the disconnection provides refuge from non-native fish predation. Hydrologic variability among tributaries was present in both systems, likely underscoring ecological asynchrony. These case studies also described density dependent processes that could influence success of restoration actions. Although actions to restore populations varied by river system, these examples show that these four portfolio assets can help guide restoration activities across a diverse range of mainstem rivers and their tributaries. Using these assets as a guide, we suggest these can be transferable to other large river-tributary systems.

Frontiers in Environmental Science↗
USGS2019

Wind sheltering impacts on land-atmosphere fluxes over fens

Wetlands and their ability to mitigate climate change motivates restorative and protective action; however, scientific understanding of land-atmosphere interactions is restricted by our limited continuous observations of gaseous fluxes. Many wetlands are small in spatial scale and embedded in forested landscapes. Yet, little is known about how the relative sheltering of forests affects net carbon (C) and energy balance. Here, we analyze coterminous USGS and Ameriflux eddy covariance flux tower observations over three years in two shrub fens in Northern Wisconsin, one more sheltered (US-ALQ) than the other (US-Los). Unsurprisingly, the open site showed higher overall wind speeds. This should have implications for atmospheric fluxes in wetlands as wind-forced processes are essential in promoting gas exchange over water. While both sites had similar half-hourly net ecosystem exchange of CO2 (NEE) during daytime, there were significant differences in nighttime NEE, as well as in net radiation partitioning in early spring and late summer. Sensible heat (H) fluxes were smaller at the sheltered fen except for the months of July-September. In contrast, latent heat (LE) fluxes were higher in every month except July. Additionally, sheltered fen ecosystem respiration had a weaker linear correlation with air temperature (R: 0.08 versus 0.57 for the open fen). Our work suggests that canopy sheltering does not cause significant differences in half-hourly NEE during the day, but rather the largest differences such as lower CO2 emissions occur at nighttime due to higher variance at very low wind speeds. Sheltering also influenced direction of air flow, mean wind speeds in day versus night, energy balance, and sensible and latent heat fluxes. We discuss implications of these findings for wetland restoration.

Wisconsin↗
USGS2018

Chronic physical disturbance substantially alters the response of biological soil crusts to a wetting pulse, as characterized by metatranscriptomic sequencing

Biological soil crusts (biocrusts) are microbial communities that are a feature of arid surface soils worldwide. In drylands where precipitation is pulsed and ephemeral, the ability of biocrust microbiota to rapidly initiate metabolic activity is critical to their survival. Community gene expression was compared after a short duration (1 hour) wetting pulse in both intact and soils disturbed by chronic foot trampling. Across the metatranscriptomes the majority of transcripts were cyanobacterial in origin, suggesting that cyanobacteria accounted for the bulk of the transcriptionally active cells. Chronic trampling substantially altered the functional profile of the metatranscriptomes, specifically resulting in a significant decrease in transcripts for nitrogen fixation. Soil depth (biocrust and below crust) was a relatively small factor in differentiating the metatranscriptomes, suggesting that the metabolically active bacteria were similar between shallow soil horizons. The dry samples were consistently enriched for hydrogenase genes, indicating that molecular hydrogen may serve as an energy source for the desiccated soil communities. The water pulse was associated with a restructuring of the metatranscriptome, particularly for the biocrusts. Biocrusts increased transcripts for photosynthesis and carbon fixation, suggesting a rapid resuscitation upon wetting. In contrast, the trampled surface soils showed a much smaller response to wetting, indicating that trampling altered the metabolic response of the community. Finally, several biogeochemical cycling genes in carbon and nitrogen cycling were assessed for their change in abundance due to wetting in the biocrusts. Different transcripts encoding the same gene product did not show a consensus response, with some more abundant in dry or wet biocrusts, highlighting the challenges in relating transcript abundance to biogeochemical cycling rates. These observations demonstrate that metatranscriptome sequencing was able to distinguish alterations in the function of arid soil microbial communities at two varying temporal scales, a long-term ecosystems disturbance through foot trampling, and a short term wetting pulse. Thus, community metatranscriptomes have the potential to inform studies on the response and resilience of biocrusts to various environmental perturbations.

Frontiers in Microbiology↗
USGS2017

Mineral-deposit model for lithium-cesium-tantalum pegmatites

Lithium-cesium-tantalum (LCT) pegmatites comprise a compositionally defined subset of granitic pegmatites. The major minerals are quartz, potassium feldspar, albite, and muscovite; typical accessory minerals include biotite, garnet, tourmaline, and apatite. The principal lithium ore minerals are spodumene, petalite, and lepidolite; cesium mostly comes from pollucite; and tantalum mostly comes from columbite-tantalite. Tin ore as cassiterite and beryllium ore as beryl also occur in LCT pegmatites, as do a number of gemstones and high-value museum specimens of rare minerals. Individual crystals in LCT pegmatites can be enormous: the largest spodumene was 14 meters long, the largest beryl was 18 meters long, and the largest potassium feldspar was 49 meters long. Lithium-cesium-tantalum pegmatites account for about one-fourth of the world’s lithium production, most of the tantalum production, and all of the cesium production. Giant deposits include Tanco in Canada, Greenbushes in Australia, and Bikita in Zimbabwe. The largest lithium pegmatite in the United States, at King’s Mountain, North Carolina, is no longer being mined although large reserves of lithium remain. Depending on size and attitude of the pegmatite, a variety of mining techniques are used, including artisanal surface mining, open-pit surface mining, small underground workings, and large underground operations using room-and-pillar design. In favorable circumstances, what would otherwise be gangue minerals (quartz, potassium feldspar, albite, and muscovite) can be mined along with lithium and (or) tantalum as coproducts. Most LCT pegmatites are hosted in metamorphosed supracrustal rocks in the upper greenschist to lower amphibolite facies. Lithium-cesium-tantalum pegmatite intrusions generally are emplaced late during orogeny, with emplacement being controlled by pre-existing structures. Typically, they crop out near evolved, peraluminous granites and leucogranites from which they are inferred to be derived by fractional crystallization. In cases where a parental granite pluton is not exposed, one is inferred to lie at depth. Lithium-cesium-tantalum LCT pegmatite melts are enriched in fluxing components including H2O, F, P, and B, which depress the solidus temperature, lower the density, and increase rates of ionic diffusion. This, in turn, enables pegmatites to form thin dikes and massive crystals despite having a felsic composition and temperatures that are significantly lower than ordinary granitic melts. Lithium-cesium-tantalum pegmatites crystallized at remarkably low temperatures (about 350–550 °C) in a remarkably short time (days to years). Lithium-cesium-tantalum pegmatites form in orogenic hinterlands as products of plate convergence. Most formed during collisional orogeny (for example, Kings Mountain district, North Carolina). Specific causes of LCT pegmatite-related magmatism could include: ordinary arc processes; over thickening of continental crust during collision or subduction; slab breakoff during or after collision; slab delamination before, during, or after collision; and late collisional extensional collapse and consequent decompression melting. Lithium-cesium-tantalum pegmatite deposits are present in all continents including Antarctica and in rocks spanning 3 billion years of Earth history. The global age distribution of LCT pegmatites is similar to those of common pegmatites, orogenic granites, and detrital zircons. Peak times of LCT pegmatite genesis at about 2640, 1800, 960, 485, and 310 Ma (million years before present) correspond to times of collisional orogeny and supercontinent assembly. Between these pulses were long intervals when few or no LCT pegmatites formed. These minima overlap with supercontinent tenures at ca. 2450–2225, 1625–1000, 875–725, and 250–200 Ma. Exploration and assessment for LCT pegmatites are guided by a number of observations. In frontier areas where exploration has been minimal at best, the key first-order criteria are an orogenic hinterland setting, appropriate regional metamorphic grades, and the presence of evolved granites and common granitic pegmatites. New LCT pegmatites are most likely to be found near known deposits. Pegmatites tend to show a regional mineralogical and geochemical zoning pattern with respect to the inferred parental granite, with the greatest enrichment in the more distal pegmatites. Mineral-chemical trends in common pegmatites that can point toward an evolved LCT pegmatite include: increasing rubidium in potassium feldspar, increasing lithium in white mica, increasing manganese in garnet, and increasing tantalum and manganese in columbite-tantalite. Most LCT pegmatite bodies show a distinctive internal zonation featuring four zones: border, wall, intermediate (where lithium, cesium, and tantalum are generally concentrated), and core. This zonation is expressed both in cross section and map view; thus, what may appear to be a common pegmatite may instead be the edge of a mineralized body. Neither lithium-cesium-tantalum pegmatites nor their parental granites are likely to cause serious environmental concerns. Soils and country rock surrounding a LCT pegmatite, as well as waste from mining operations, may be enriched in characteristic elements relative to global average soil and bedrock values. These elements may include lithium, cesium, tantalum, beryllium, boron, fluorine, phosphorus, manganese, gallium, rubidium, niobium, tin, and hafnium. Among this suite of elements, however, the only ones that might present a concern for environmental health are beryllium and fluorine, which are included in the U.S. Environmental Protection Agency drinking-water regulations with maximum contaminant levels of 4 micrograms per liter and 4 milligrams per liter, respectively.

Scientific Investigations Report↗
USGS2018

Vibrio population dynamics in Mid-Atlantic surface waters during Saharan dust events

Vibrio is a cosmopolitan genus of marine bacteria, highly investigated in coastal and estuarine environments. Vibrio have also been isolated from pelagic waters, yet very little is known about the ecology of these oligotrophic species. In this study we examined the relative change in bacterial abundance and more specifically the dynamics of Vibrio in the tropical North Atlantic in response to the arrival of pulses of Saharan dust aerosols, a major source of biologically important nutrients for downwind marine surface waters. Aerosol and surface water samples were collected over 1 month coinciding with at least two distinct dust events. Total bacterial counts increased by 1.6-fold correlating with the arrival of Saharan dust ( r = 0.76; p = 0.001). Virus-like particles (VLP) also followed this trend and were correlated with bacterial counts ( r = 0.67; p = 0.01). Vibrio specific qPCR targeting the 16S rRNA gene ranged from below detection limits to a high of 9,145 gene copies ml −1 with the arrival of dust. This increase equated to 6.5 × 10 2 −1.5 × 10 3 individual genome equivalents ml −1 based on the known range of 16S rRNA copies among this genus. Vibrio exhibited bloom-bust cycles potentially attributed to selective viral lysis or bloom depletion of organic carbon. This work is one of the few studies to examine the open ocean ecology of Vibrio , a conditionally rare taxon, whose bloom-bust lifestyle likely is a contributing factor in the flow of nutrients and energy in pelagic ecosystems.

Frontiers in Marine Science↗
USGS2020

Oases of the future? Evaluating springs as potential hydrologic refugia in drying climates

Springs in water-limited landscapes are biodiversity hotspots and keystone ecosystems, disproportionately influencing surrounding landscapes despite their often small areas. Some springs served as evolutionary refugia during previous climate drying, supporting relict species in isolated habitats. Understanding whether springs will provide hydrologic refugia from future climate change is important to biodiversity conservation but complicated by hydrologic variability among springs, data limitations, and multiple non-climate threats to groundwater-dependent ecosystems. Here, we present a conceptual framework for categorizing springs as potentially stable, relative, or transient hydrologic refugia in a drying climate. Clues about refugial capacity of springs can be assembled from diverse approaches, including citizen-science-powered ecohydrologic monitoring, remote sensing, landowner interviews, and environmental tracer analysis. Managers can integrate multiple lines of evidence to predict which springs may become future refugia for species of concern, strengthening the long-term effectiveness of springs conservation and restoration and informing climate adaptation for terrestrial and freshwater species.

Frontiers in Ecology and the Environment↗
USGS1980

The geologic story of the Great Plains

The Great Plains! The words alone create a sense of space and a feeling of destiny a challenge. But what exactly is this special part of Western America that contains so much of our history? How did it come to be? Why is it different? Geographically, the Great Plains is an immense sweep of country; it reaches from Mexico far north into Canada and spreads out east of the Rocky Mountains like a huge welcome mat. So often maligned as a drab, featureless area, the Great Plains is in fact a land of marked contrasts and limitless variety: canyons carved into solid rock of an arid land by the waters of the Pecos and the Rio Grande; the seemingly endless grainfields of Kansas; the desolation of the Badlands; the beauty of the Black Hills. Before it was broken by the plow, most of the Great Plains from the Texas panhandle northward was treeless grassland. Trees grew only along the floodplains of streams and on the few mountain masses of the northern Great Plains. These lush prairies once were the grazing ground for immense herds of bison, and the land provided a bountiful life for those Indians who followed the herds. South of the grasslands, in Texas, shrubs mixed with the grasses: creosote bush along the valley of the Pecos River; mesquite, oak, and juniper to the east. The general lack of trees suggests that this is a land of little moisture, as indeed it is. Nearly all of the Great Plains receives less than 24 inches of rainfall a year, and most of it receives less than 16 inches. This dryness and the strength of sunshine in this area, which lies mostly between 2,000 and 6,000 feet above sea level, create the semiarid environment that typifies the Great Plains. But it was not always so. When the last continental glacier stood near its maximum extent, some 12,000-14,000 years ago, spruce forest reached southward as far as Kansas, and the Great Plains farther south was covered by deciduous forest. The trees retreated northward as the ice front receded, and the Great Plains has been a treeless grassland for the last 8,000-10,000 years. For more than half a century after Lewis and Clark crossed the country in 1805-6, the Great Plains was the testing ground of frontier America here America grew to maturity (fig. 1). In 1805-7, explorer Zebulon Pike crossed the southcentral Great Plains, following the Arkansas River from near Great Bend, Kans., to the Rocky Mountains. In later years, Santa Fe traders, lured by the wealth of New Mexican trade, followed Pike's path as far as Bents Fort, Colo., where they turned southwestward away from the river route. Those pioneers who later crossed the plains on the Oregon Trail reached the Platte River near the place that would become Kearney, Nebr., by a nearly direct route from Independence, Mo., and followed the Platte across the central part of the Great Plains.

Bulletin↗
USGS2017

The contribution of lakes to global inland fisheries harvest

Freshwater ecosystems provide numerous services for communities worldwide, including irrigation, hydropower, and municipal water; however, the services provided by inland fisheries – nourishment, employment, and recreational opportunities – are often comparatively undervalued. We provide an independent estimate of global lake harvest to improve biological and socioeconomic assessments of inland fisheries. On the basis of satellite-derived estimates of chlorophyll concentration from 80,012 globally distributed lakes, lake-specific fishing effort based on human population, and output from a Bayesian hierarchical model, we estimated that the global lake fishery harvest in the year 2011 was 8.4 million tons (mt). Our calculations excluded harvests from highly productive rivers, wetlands, and very small lakes; therefore, the true cumulative global fishery harvest from all freshwater sources likely exceeded 11 mt as reported by the Food and Agriculture Organization of the United Nations (FAO). This putative underestimate by the FAO could diminish the perceived importance of inland fisheries and perpetuate decisions that adversely affect these fisheries and millions of people.

Frontiers in Ecology and the Environment↗
USGS2022

Modflow-setup: Robust automation of groundwater model construction

In an age of both big data and increasing strain on water resources, sound management decisions often rely on numerical models. Numerical models provide a physics-based framework for assimilating and making sense of information that by itself only provides a limited description of the hydrologic system. Often, numerical models are the best option for quantifying even intuitively obvious connections between human activities and water resource impacts. However, despite many recent advances in model data assimilation and uncertainty quantification, the process of constructing numerical models remains laborious, expensive, and opaque, often precluding their use in decision making. Modflow-setup aims to provide rapid and consistent construction of MODFLOW groundwater models through robust and repeatable automation. Common model construction tasks are distilled in an open-source, online code base that is tested and extensible through collaborative version control. Input to Modflow-setup consists of a single configuration file that summarizes the workflow for building a model, including source data, construction options, and output packages. Source data providing model structure and parameter information including shapefiles, rasters, NetCDF files, tables, and other (geolocated) sources to MODFLOW models are read in and mapped to the model discretization, using Flopy and other general open-source scientific Python libraries. In a few minutes, an external array-based MODFLOW model amenable to parameter estimation and uncertainty quantification is produced. This paper describes the core functionality of Modflow-setup, including a worked example of a MODFLOW 6 model for evaluating pumping impacts to a lake in central Wisconsin, United States.

Wisconsin↗
USGS2020

Life at the frozen limit: Microbial carbon metabolism across a Late Pleistocene permafrost chronosequence

Permafrost is an extreme habitat yet it hosts microbial populations that remain active over millennia. Using permafrost collected from a Pleistocene chronosequence (19 to 33 ka), we hypothesized that the functional genetic potential of microbial communities in permafrost would reflect microbial strategies to metabolize permafrost soluble organic matter (OM) in situ over geologic time. We also hypothesized that changes in the metagenome across the chronosequence would correlate with shifts in carbon chemistry, permafrost age, and paleoclimate at the time of permafrost formation. We combined high-resolution characterization of water-soluble OM by Fourier-transform ion-cyclotron-resonance mass spectrometry (FT-ICR MS), quantification of organic anions in permafrost water extracts, and metagenomic sequencing to better understand the relationships between the molecular-level composition of potentially bioavailable OM, the microbial community, and permafrost age. Both age and paleoclimate had marked effects on both the molecular composition of dissolved OM and the microbial community. The relative abundance of genes associated with hydrogenotrophic methanogenesis, carbohydrate active enzyme families, nominal oxidation state of carbon (NOSC), and number of identifiable molecular formulae significantly decreased with increasing age. In contrast, genes associated with fermentation of short chain fatty acids (SCFAs), the concentration of SCFAs and ammonium all significantly increased with age. We present a conceptual model of microbial metabolism in permafrost based on fermentation of OM and the buildup of organic acids that helps to explain the unique chemistry of ancient permafrost soils. These findings imply long-term in situ microbial turnover of ancient permafrost OM and that this pooled biolabile OM could prime ancient permafrost soils for a larger and more rapid microbial response to thaw compared to younger permafrost soils.

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