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Evaluation of coral pathogen growth rates after exposure to atmospheric African dust samples

Laboratory experiments were conducted to assess if exposure to atmospheric African dust stimulates or inhibits the growth of four putative bacterial coral pathogens. Atmospheric dust was collected from a dust-source region (Mali, West Africa) and from Saharan Air Layer masses over downwind sites in the Caribbean [Trinidad and Tobago and St. Croix, U.S. Virgin Islands (USVI)]. Extracts of dust samples were used to dose laboratory-grown cultures of four putative coral pathogens: Aurantimonas coralicida (white plague type II), Serratia marcescens (white pox), Vibrio coralliilyticus , and V. shiloi (bacteria-induced bleaching). Growth of A. coralicida and V. shiloi was slightly stimulated by dust extracts from Mali and USVI, respectively, but unaffected by extracts from the other dust sources. Lag time to the start of log-growth phase was significantly shortened for A. coralicida when dosed with dust extracts from Mali and USVI. Growth of S. marcescens and V. coralliilyticus was neither stimulated nor inhibited by any of the dust extracts. This study demonstrates that constituents from atmospheric dust can alter growth of recognized coral disease pathogens under laboratory conditions.

Caribbean Sea

National Oceanic and Atmospheric Administration hydrographic survey data used in a U.S. Geological Survey regional geologic framework study along the Delmarva Peninsula

The U.S. Geological Survey initiated a research effort in 2014 to define the geologic framework of the Delmarva Peninsula inner continental shelf, which included new data collection and assembly of relevant extant datasets. Between 2006 and 2011, Science Applications International Corporation, under contract to the National Oceanic and Atmospheric Administration National Ocean Service, carried out 23 hydrographic surveys covering more than 4,100 square kilometers of the continental shelf using Reson multibeam echosounders and Klein towed sidescan sonars to update nautical charts along the Delmarva Peninsula. Acoustic backscatter data from these instruments are valuable for characterizing aspects of shallow geologic framework, including seafloor geology, sediment transport pathways, and marine resources. The data cover an area that extends from the entrance of Delaware Bay, Delaware, south to Parramore Island, Virginia, in water depths of about 3 to 35 meters below mean lower low water. Data were collected along lines spaced 40 meters apart, resulting in 40 to 100 percent seafloor coverage for multibeam bathymetry. Processed bathymetric data within the Delmarva Peninsula study area are available through a National Ocean Service interactive map interface, but towed sidescan data products are limited, and multibeam backscatter data products have not been available in the past. The U.S. Geological Survey obtained raw Reson multibeam data files from Science Applications International Corporation and the National Oceanic and Atmospheric Administration for 20 hydrographic surveys and extracted backscatter data using the Fledermaus Geocoder Toolbox from Quality Positioning Service. The backscatter mosaics produced by the U.S. Geological Survey for the inner continental shelf of the Delmarva Peninsula using National Oceanic and Atmospheric Administration data increased regional geophysical surveying efficiency, collaboration among government agencies, and the area over which geologic data can be interpreted by the U.S. Geological Survey. This report describes the methods by which the backscatter data were extracted and processed and includes backscatter mosaics and interpolated bathymetric surfaces.

Delaware, Maryland, Virginia

Sensitivity of alpine and subalpine lakes to acidification from atmospheric deposition in Grand Teton National Park and Yellowstone National Park, Wyoming

The sensitivity of 400 lakes in Grand Teton and Yellowstone National Parks to acidification from atmospheric deposition of nitrogen and sulfur was estimated based on statistical relations between acid-neutralizing capacity concentrations and basin characteristics to aid in the design of a long-term monitoring plan for Outstanding Natural Resource Waters. Acid-neutralizing capacity concentrations that were measured at 52 lakes in Grand Teton and 23 lakes in Yellowstone during synoptic surveys were used to calibrate the statistical models. Three acid-neutralizing capacity concentration bins (bins) were selected that are within the U.S. Environmental Protection Agency criteria of sensitive to acidification; less than 50 microequivalents per liter (?eq/L) (0-50), less than 100 ?eq/L (0-100), and less than 200 ?eq/L (0-200). The development of discrete bins enables resource managers to have the ability to change criteria based on the focus of their study. Basin-characteristic information was derived from Geographic Information System data sets. The explanatory variables that were considered included bedrock type, basin slope, basin aspect, basin elevation, lake area, basin area, inorganic nitrogen deposition, sulfate deposition, hydrogen ion deposition, basin precipitation, soil type, and vegetation type. A logistic regression model was developed and applied to lake basins greater than 1 hectare in Grand Teton (n = 106) and Yellowstone (n = 294). A higher percentage of lakes in Grand Teton than in Yellowstone were predicted to be sensitive to atmospheric deposition in all three bins. For Grand Teton, 7 percent of lakes had a greater than 60-percent probability of having acid-neutralizing capacity concentrations in the 0-50 bin, 36 percent of lakes had a greater than 60-percent probability of having acid-neutralizing capacity concentrations in the 0-100 bin, and 59 percent of lakes had a greater than 60-percent probability of having acid-neutralizing capacity concentrations in the 0-200 bin. The elevation of the lake outlet and the area of the basin with northeast aspects were determined to be statistically significant and were used as the explanatory variables in the multivariate logistic regression model for the 0-100 bin. For Yellowstone, results indicated that 13 percent of lakes had a greater than 60-percent probability of having acid-neutralizing capacity concentrations in the 0-100 bin, and 27 percent of lakes had a greater than 60-percent probability of having acid-neutralizing capacity concentrations in the 0-200 bin. Only the elevation of the lake outlet was determined to be statistically significant and was used as the explanatory variable for the 0-100 bin. The lakes that exceeded 60-percent probability of having an acid-neutralizing capacity concentration in the 0-100 bin, and therefore had the greatest sensitivity to acidification from atmospheric deposition, are located at elevations greater than 2,790 meters in Grand Teton, and greater than 2,590 meters in Yellowstone.

Scientific Investigations Report

Atmospheric Deposition and Surface-Water Chemistry in Mount Rainier and North Cascades National Parks, U.S.A., Water Years 2000 and 2005-2006

High-elevation aquatic ecosystems in Mount Rainier and North Cascades National Parks are highly sensitive to atmospheric deposition of nitrogen and sulfur. Thin, rocky soils promote fast hydrologic flushing rates during snowmelt and rain events, limiting the ability of basins to neutralize acidity and assimilate nitrogen deposited from the atmosphere. Potential effects of nitrogen and sulfur deposition include episodic or chronic acidification of terrestrial and aquatic ecosystems. In addition, nitrogen deposition can cause eutrophication of water bodies and changes in species composition in lakes and streams. This report documents results of a study performed by the U.S. Geological Survey, in cooperation with the National Park Service, of the effects of atmospheric deposition of nitrogen and sulfur on surface-water chemistry in Mount Rainier and North Cascades National Parks. Inorganic nitrogen in wet deposition was highest in the vicinity of North Cascades National Park, perhaps due to emissions from human sources and activities in the Puget Sound area. Sulfur in wet deposition was highest near the Pacific coast, reflecting the influence of marine aerosols. Dry deposition generally accounted for less than 30 percent of wet plus dry inorganic nitrogen and sulfur deposition, but occult deposition (primarily fog) represents a potentially substantial unmeasured component of total deposition. Trend analyses indicate inorganic nitrogen in wet deposition was relatively stable during 1986-2005, but sulfur in wet deposition declined substantially during that time, particularly after 2001, when emissions controls were added to a large powerplant in western Washington. Surface-water sulfate concentrations at the study site nearest the powerplant showed a statistically significant decrease between 2000 and 2005-06, but there was no statistically significant change in alkalinity, indicating a delayed response in surface-water alkalinity. Seasonal patterns in surface-water chemistry and streamflow are strongly influenced by melting of seasonal snowpacks, which release large amounts of dilute, slightly acidic water to terrestrial and aquatic ecosystems during spring snowmelt. Concentrations of sulfate, alkalinity, and base cations in surface water declined rapidly during snowmelt, then gradually recovered during summer and fall. Preferential elution of acidic solutes from the snowpack at the beginning of snowmelt may cause episodic acidification in small alpine streams; evidence is provided by a stream sample collected at one of the sites during spring 2006 that was acidic (pH = 4.8, alkalinity = -18 microequivalents per liter) and had high concentrations of nitrate and sulfate and low concentrations of weathering products. Rain-on-snow events caused sharp declines in specific conductance, which was measured continuously using an in-stream sensor. A strong correlation was observed between measured specific conductance and measured alkalinity (r2 = 0.76), permitting estimation of alkalinity from specific-conductance data using a regression equation. Estimated alkalinity declined by an order of magnitude during the rain-on-snow events, in one case to 8 microequivalents per liter. Actual declines in alkalinity might be greater because the regression equation accounts only for dilution effects; at low concentrations, the relation between specific conductance and alkalinity is likely to be nonlinear and have a negative intercept (negative alkalinity). Thus, episodic acidification is possible during rain-on-snow events. The scale of episodic acidification is unknown, but if it occurs, it could have detrimental effects on aquatic life and amphibians. Historical lake-survey data indicate that most lakes are oligotrophic and have low nitrogen and phosphorus concentrations. Nitrogen limitation is more common in lakes in Mount Rainier National Park than in North Cascades National Park due to higher nitrate concentrations at North Cascades. T

Scientific Investigations Report

Comparison of Atmospheric Deposition Among Three Sites In and Near the Flat Tops Wilderness Area, Colorado, 2003-2005

Atmospheric deposition was monitored for ammonium, nitrate, and sulfate concentrations and precipitation amounts in the Flat Tops Wilderness Area of northwestern Colorado at Ned Wilson Lake beginning in 1984 to detect changes that might result from future emissions associated with development of oil-shale resources in northwestern Colorado. Renewed monitoring, by the U.S. Geological Survey, in cooperation with Rio Blanco County, to determine the current status of atmospheric deposition has been ongoing since 2003 at Ned Wilson Lake. Two new monitoring sites were located near Ripple Creek Pass near the Flat Tops Wilderness area and about 12 kilometers north of Ned Wilson Lake because access to the area near Ripple Creek Pass is less difficult and less expensive, particularly in winter and spring. The intent of this study was to establish whether the new deposition data being collected near Ripple Creek Pass, near the northern boundary of the Flat Tops Wilderness Area, would be representative of deposition at sensitive sites within the wilderness such as Ned Wilson Lake and to compare more current (2003 through 2005) deposition data with earlier data (1984 through 1991). At Ned Wilson Lake, bulk ammonium and nitrate concentrations collected from 1984 through 1991 were similar to those from 2003 through 2005. However, in the same comparison significant differences in sulfate concentrations were observed, indicating a decrease consistent with other regional findings for similar periods. Comparison of concentrations of constituents at two bulk-deposition sites located at Ned Wilson Lake (NWLB) and near Ripple Creek Pass (RCPB) showed only one significant difference (p = 0.05) with the winter bulk nitrate concentrations for NWLB significantly lower than winter concentrations from RCPB. Another comparison of concentrations of constituents between the bulk deposition site RCPB and a wet deposition site 100 meters away (RCPW) showed no significant differences for concentrations of ammonium, nitrate, and sulfate for both the winter and summer comparisons. While results indicate many similarities in concentrations of constituents and in seasonal variability in those concentrations, they are based on a short period of study. Precipitation amounts from RCPB were less than the amounts collected at NWLB, and precipitation amounts from RCPW were less than the amounts collected at RCPB. Although RCPB may not be a perfect replacement site for NWLB, it may be similar enough to represent atmospheric deposition in areas of the Flat Tops Wilderness of northwestern Colorado.

Scientific Investigations Report

Methods, quality assurance, and data for assessing atmospheric deposition of pesticides in the Central Valley of California

The U.S. Geological Survey monitored atmospheric deposition of pesticides in the Central Valley of California during two studies in 2001 and 2002–04. The 2001 study sampled wet deposition (rain) and storm-drain runoff in the Modesto, California, area during the orchard dormant-spray season to examine the contribution of pesticide concentrations to storm runoff from rainfall. In the 2002–04 study, the number and extent of collection sites in the Central Valley were increased to determine the areal distribution of organophosphate insecticides and other pesticides, and also five more sample types were collected. These were dry deposition, bulk deposition, and three sample types collected from a soil box: aqueous phase in runoff, suspended sediment in runoff, and surficial-soil samples. This report provides concentration data and describes methods and quality assurance of sample collection and laboratory analysis for pesticide compounds in all samples collected from 16 sites. Each sample was analyzed for 41 currently used pesticides and 23 pesticide degradates, including oxygen analogs (oxons) of 9 organophosphate insecticides. Analytical results are presented by sample type and study period. The median concentrations of both chloryprifos and diazinon sampled at four urban (0.067 micrograms per liter [μg/L] and 0.515 μg/L, respectively) and four agricultural sites (0.079 μg/L and 0.583 μg/L, respectively) during a January 2001 storm event in and around Modesto, Calif., were nearly identical, indicating that the overall atmospheric burden in the region appeared to be fairly similar during the sampling event. Comparisons of median concentrations in the rainfall to those in the McHenry storm-drain runoff showed that, for some compounds, rainfall contributed a substantial percentage of the concentration in the runoff; for other compounds, the concentrations in rainfall were much greater than in the runoff. For example, diazinon concentrations in rainfall were about 70 percent of the diazinon concentration in the runoff, whereas the chlorpyrifos concentration in the rain was 1.8 times greater than in the runoff. The more water-soluble pesticides—carbaryl, metolachlor, napropamide, and simazine—followed the same pattern as diazinon and had lower concentrations in rain compared to runoff. Similar to chlorpyrifos,compounds with low water solubilities and higher soil-organic carbon partition coefficients, including dacthal, pendimethalin, and trifluralin, were found to have higher concentrations in rain than in runoff water and were presumed to partition to the suspended sediments and organic matter on the ground. During the 2002–04 study period, the herbicide dacthal had the highest detection frequencies for all sample types collected from the Central Valley sites (67–100 percent). The most frequently detected compounds in the wet-deposition samples were dacthal, diazinon, chlorpyrifos, and simazine (greater than 90 percent). The median wet-deposition amounts for these compounds were 0.044 micrograms per square meter per day (μg/m 2 /day), 0.209 μg/m 2 /day, 0.079 μg/m 2 /day, and 0.172 μg/m 2 /day, respectively. For the dry-deposition samples, detection frequencies were greater than 73 percent for the compounds dacthal, metolachor, and chlorpyrifos, and median deposition amounts were an order of magnitude less than for wet deposition. The differences between wet deposition and dry deposition appeared to be closely related to the Henry’s Law (H) constant of each compound, although the mass deposited by dry deposition takes place over a much longer time frame. Pesticides detected in rainfall usually were detected in the aqueous phase of the soil-box runoff water, and the runoff concentrations were generally similar to those in the rainfall. For compounds detected in the aqueous phase and suspended-sediment samples of soil-box runoff, concentrations of pesticides in the aqueous phase generally were detected in low concentrations and had few corresponding detections in the suspended- sediment samples. Dacthal, diazinon, chlorpyrifos, and simazine were the most frequently detected pesticides (greater than 83 percent) in the aqueous-phase samples, with median concentrations of 0.010 μg/L, 0.045 μg/L, 0.016 μg/L, and 0.077 μg/L, respectively. Simazine was the most frequently detected compound in the suspended-sediment samples (69 percent), with a median concentration of 0.232 μg/L. Results for compounds detected in the surficial-soil samples collected throughout the study period showed that there was an increase in concentration for some compounds, indicating atmospheric deposition of these compounds onto the soil-box surface. In the San Joaquin Valley, the compounds chlorpyrifos, dacthal, and iprodione were detected at higher concentrations (between 1.4 and 2 times greater) than were found in the background samples collected from the San Joaquin Valley soil-box sites. In the Sacramento Valley, the compounds chlorpyrifos, dacthal, iprodione, parathionmethyl, and its oxygen analog, paraoxon-methyl, were detected in samples collected during the study period in low concentrations, but were not detected in the background concentration of the Sacramento Valley soil mix.

California

External quality assurance project report for the National Atmospheric Deposition Program’s National Trends Network and Mercury Deposition Network, 2013–14

The U.S. Geological Survey Branch of Quality Systems operated five distinct programs to provide external quality assurance monitoring for the National Atmospheric Deposition Program’s (NADP) National Trends Network and Mercury Deposition Network during 2013–14. The National Trends Network programs include (1) a field audit program to evaluate sample contamination and stability, (2) an interlaboratory comparison program to evaluate analytical laboratory performance, and (3) a colocated sampler program to evaluate bias from precipitation sampler upgrades. The Mercury Deposition Network programs include the (4) system blank program and (5) an interlaboratory comparison program. The results indicate that NADP data continue to be of sufficient quality for the analysis of spatial distributions and time trends for chemical constituents in wet deposition. The field audit program results indicate that sample contamination levels for calcium, nitrate, and sulfate continued to increase during the study period while sodium and chloride contamination decreased and magnesium, potassium, ammonium, and hydrogen-ion contamination have remained relatively constant. Analyte losses due to potential sample instability were negligible. The NADP Central Analytical Laboratory produced interlaboratory comparison results with low bias and variability compared to other domestic and international laboratories that support atmospheric deposition monitoring. Colocated sampler program results from dissimilar colocated collectors suggest that the retrofit of the National Trends Network with N-CON Systems precipitation collectors could cause shifts in NADP annual deposition (concentration multiplied by depth) values from +6.2 to +51 percent for ammonium, from +8.1 to +61 percent for nitrate, from 3.8 to 71 percent for sulfate, from –24 to +15 percent for hydrogenion deposition, and larger shifts (from –14 to +102 percent) for calcium, magnesium, sodium, potassium, and chloride. The N-CON Systems collector typically catches more precipitation than the NADP-approved Aerochem Metrics Model 301 collector, but it typically caught slightly less precipitation than the Aerochem Metrics collector at a wind-swept, high-altitude site during water year 2013. Paired, identical OTT Pluvio-2 and ETI Noah IV rain gages were operated at the same sites. Results of the colocated rain gages indicate from 0 to 3.7 percent median absolute percent difference for weekly precipitation-depth measurements and from 0.05 to 5.6 absolute percent difference for annual total precipitation depth. The Mercury Deposition Network programs include the system blank program and an interlaboratory comparison program. System blank results indicated that maximum total mercury contamination concentrations in samples were less than the third percentile of all Mercury Deposition Network sample concentrations. The Mercury Analytical Laboratory produced chemical concentration results with low bias and variability compared with other domestic and international laboratories that support atmospheric-deposition monitoring.

Scientific Investigations Report

External quality assurance project report for the National Atmospheric Deposition Program’s National Trends Network and Mercury Deposition Network, 2015–16

The U.S. Geological Survey Precipitation Chemistry Quality Assurance project operated five distinct programs to provide external quality assurance monitoring for the National Atmospheric Deposition Program’s (NADP) National Trends Network and Mercury Deposition Network during 2015–16. The National Trends Network programs include (1) a field audit program to evaluate sample contamination and stability, (2) an interlaboratory comparison program to evaluate analytical laboratory performance, and (3) a colocated sampler program to evaluate bias and variability attributed to automated precipitation samplers. The Mercury Deposition Network programs include the (4) system blank program and (5) an interlaboratory comparison program. The results indicate that NADP data continue to be of sufficient quality for the analysis of spatial distributions and time trends for chemical constituents in wet deposition. The field audit program results indicate increased sample contamination for calcium, magnesium, and potassium relative to 2010 levels, and slight fluctuation in sodium contamination. Nitrate contamination levels dropped slightly during 2014–16, and chloride contamination leveled off between 2007 and 2016. Sulfate contamination is similar to the 2000 level. Hydrogen ion contamination has steadily decreased since 2012. Losses of ammonium and nitrate resulting from potential sample instability were negligible. The NADP Central Analytical Laboratory produced interlaboratory comparison results with low bias and variability compared to other domestic and international laboratories that support atmospheric deposition monitoring. Significant absolute bias above the magnitudes of the detection limits was observed for nitrate and sulfate concentrations, but no analyte determinations exceeded the detection limits for blanks. Colocated sampler program results from dissimilar colocated collectors indicate that the retrofit of the National Trends Network with N-CON Systems Company, Inc. precipitation collectors could cause substantial shifts in NADP annual deposition (concentration multiplied by depth) values. Median weekly relative percent differences for analyte concentrations ranged from -4 to +76 percent for cations, from 5 to 6 percent for ammonium, from +14 to +25 percent for anions, and from -21 to +8 percent for hydrogen ion contamination. By comparison, weekly absolute concentration differences for paired identical N-CON Systems Company, Inc., collectors ranged from 4–22 percent for cations; 2–9 percent for anions; 4–5 percent for ammonium; and 13–14 percent for hydrogen ion contamination. The N-CON Systems Company, Inc. collector caught more precipitation than the Aerochem Metrics Model 301 collector (ACM) at the WA99/99WA sites, but it typically caught slightly less precipitation than the ACM at ND11/11ND, sites which receive more wind and snow than WA99/99WA. Paired, identical OTT Pluvio-2 and ETI Noah IV precipitation gages were operated at the same sites. Median absolute percent differences for daily measured precipitation depths ranged from 0 to 7 percent. Annual absolute differences ranged from 0.08 percent (ETI Noah IV precipitation gages) to 11 percent (OTT Pluvio-2 precipitation gages). The Mercury Deposition Network programs include the system blank program and an interlaboratory comparison program. System blank results indicate that maximum total mercury contamination concentrations in samples were less than the third percentile of all Mercury Deposition Network sample concentrations (1.098 nanograms per liter; ng/L). The Mercury Analytical Laboratory produced chemical concentration results with low bias and variability compared with other domestic and international laboratories that support atmospheric-deposition monitoring. The laboratory’s performance results indicate a +1-ng/L shift in bias between 2015 (-0.4 ng/L) and 2016 (+0.5 ng/L).

Scientific Investigations Report

Quality and quantity of runoff and atmospheric deposition in urban areas of Salt Lake County, Utah, 1980-81

Water of good quality from mountain streams is degraded as it moves through urban areas to the Jordan River in Salt Lake County, Utah. The impact of urban runoff and atmospheric deposition on the quality of water in those streams and in storm conduits and canals functioning as storm drains was evaluated using data collected during 1980-81. Atmospheric-wetfall loads for an average storm were as much as 10 pounds per acre for total solids, but the dissolved trace metals were generally present in insignificant quantities. Wetfall-deposition loads generally were greater than storm-runoff loads, indicating that a large quantity of the wetfall load remained as soil deposits. Acid rain fell in more than one-half of the storms sampled, most commonly in September and October. Dustfall concentrations reflected the composition of local soils, particularly with regard to iron, manganese, and chromium; but concentrations of cadmium, copper, lead, zinc, and chloride were considerably enriched. Monthly loads of dryfall solids reached a maximum of 62 pounds per acre in the Little Cottonwood Creek urban basin, but were of the same magnitude as total storm loads for a heavy rainfall. Urban runoff represented about 38 percent of the discharge in three canals. The water in the canals was poorer in quality than the water in the mountain streams. The impact of the canal discharges to the streams is slight, however, owing to their ' relatively small amounts. ' Concentrations of sediment, suspended solids, suspended trace metals, phosphorus, and oxygen-demanding substances were much greater during storm runoff than under base-flow conditions. This report contains data for basin and storm characteristics and water-quality information for atmospheric deposition and urban runoff. (USGS)

Utah

Precision and bias of selected analytes reported by the National Atmospheric Deposition Program and National Trends Network, 1983; and January 1980 through September 1984

Blind-audit samples with known analyte concentrations have been prepared by the U.S. Geological Survey and distributed to the National Atmospheric Deposition Program 's Central Analytical Laboratory. The difference between the National Atmospheric Deposition Program and National Trends Network reported analyte concentrations and known analyte concentrations have been calculated, and the bias has been determined. Calcium, magnesium , sodium, and chloride were biased at the 99-percent confidence limit; potassium and sulfate were unbiased at the 99-percent confidence limit, for 1983 results. Relative-percent differences between the measured and known analyte concentration for calcium , magnesium, sodium, potassium, chloride, and sulfate have been calculated for 1983. The median relative percent difference for calcium was 17.0; magnesium was 6.4; sodium was 10.8; potassium was 6.4; chloride was 17.2; and sulfate was -5.3. These relative percent differences should be used to correct the 1983 data before user-analysis of the data. Variances have been calculated for calcium, magnesium, sodium, potassium, chloride, and sulfate determinations. These variances should be applicable to natural-sample analyte concentrations reported by the National Atmospheric Deposition Program and National Trends Network for calendar year 1983. (USGS)

Water-Resources Investigations Report

Quality-assurance results for field pH and specific-conductance measurements, and for laboratory analysis, National Atmospheric Deposition Program and National Trends Network; January 1980-September 1984

Five intersite comparison studies for the field determination of pH and specific conductance, using simulated-precipitation samples, were conducted by the U.S.G.S. for the National Atmospheric Deposition Program and National Trends Network. These comparisons were performed to estimate the precision of pH and specific conductance determinations made by sampling-site operators. Simulated-precipitation samples were prepared from nitric acid and deionized water. The estimated standard deviation for site-operator determination of pH was 0.25 for pH values ranging from 3.79 to 4.64; the estimated standard deviation for specific conductance was 4.6 microsiemens/cm at 25 C for specific-conductance values ranging from 10.4 to 59.0 microsiemens/cm at 25 C. Performance-audit samples with known analyte concentrations were prepared by the U.S.G.S.and distributed to the National Atmospheric Deposition Program 's Central Analytical Laboratory. The differences between the National Atmospheric Deposition Program and national Trends Network-reported analyte concentrations and known analyte concentrations were calculated, and the bias and precision were determined. For 1983, concentrations of calcium, magnesium, sodium, and chloride were biased at the 99% confidence limit; concentrations of potassium and sulfate were unbiased at the 99% confidence limit. Four analytical laboratories routinely analyzing precipitation were evaluated in their analysis of identical natural- and simulated precipitation samples. Analyte bias for each laboratory was examined using analysis of variance coupled with Duncan 's multiple-range test on data produced by these laboratories, from the analysis of identical simulated-precipitation samples. Analyte precision for each laboratory has been estimated by calculating a pooled variance for each analyte. Interlaboratory comparability results may be used to normalize natural-precipitation chemistry data obtained from two or more of these laboratories. (Author 's abstract)

Water-Resources Investigations Report

An algorithm for correction of atmospheric scattering dilution effects in volcanic gas emission measurements using skylight differential optical absorption spectroscopy

Differential Optical Absorption Spectroscopy (DOAS) is commonly used to measure gas emissions from volcanoes. DOAS instruments measure the absorption of solar ultraviolet (UV) radiation scattered in the atmosphere by sulfur dioxide (SO 2 ) and other trace gases contained in volcanic plumes. The standard spectral retrieval methods assume that all measured light comes from behind the plume and has passed through the plume along a straight line. However, a fraction of the light that reaches the instrument may have been scattered beneath the plume and thus has passed around it. Since this component does not contain the absorption signatures of gases in the plume, it effectively “dilutes” the measurements and causes underestimation of the gas abundance in the plume. This dilution effect is small for clean-air conditions and short distances between instrument and plume. However, plume measurements made at long distance and/or in conditions with significant atmospheric aerosol, haze, or clouds may be severely affected. Thus, light dilution is regarded as a major error source in DOAS measurements of volcanic degassing. Several attempts have been made to model the phenomena and the physical mechanisms are today relatively well understood. However, these models require knowledge of the local atmospheric aerosol composition and distribution, parameters that are almost always unknown. Thus, a practical algorithm to quantitatively correct for the dilution effect is still lacking. Here, we propose such an algorithm focused specifically on SO 2 measurements. The method relies on the fact that light absorption becomes non-linear for high SO 2 loads, and that strong and weak SO 2 absorption bands are unequally affected by the diluting signal. These differences can be used to identify when dilution is occurring. Moreover, if we assume that the spectral radiance of the diluting light is identical to the spectrum of light measured away from the plume, a measured clean air spectrum can be used to represent the dilution component. A correction can then be implemented by iteratively subtracting fractions of this clean air spectrum from the measured spectrum until the respective absorption signals on strong and weak SO 2 absorption bands are consistent with a single overhead SO 2 abundance. In this manner, we can quantify the magnitude of light dilution in each individual measurement spectrum as well as obtaining a dilution-corrected value for the SO 2 column density along the line of sight of the instrument. This paper first presents the theory behind the method, then discusses validation experiments using a radiative transfer model, as well as applications to field data obtained under different measurement conditions at three different locations; Fagradalsfjall located on the Reykjanaes peninsula in south Island, Manam located off the northeast coast of mainland Papua New Guinea and Holuhraun located in the inland of north east Island.

Frontiers in Earth Science

Estimating lake-atmosphere CO2 exchange

Lake‐atmosphere CO 2 flux was directly measured above a small, woodland lake using the eddy covariance technique and compared with fluxes deduced from changes in measured lake‐water CO 2 storage and with flux predictions from boundary‐layer and surface‐renewal models. Over a 3‐yr period, lake‐atmosphere exchanges of CO 2 were measured over 5 weeks in spring, summer, and fall. Observed springtime CO 2 efflux was large (2.3–2.7 umol m ‐2 s ‐1 ) immediately after lake‐thaw. That efflux decreased exponentially with time to less than 0.2 umol m ‐2 s −1 within 2 weeks. Substantial interannual variability was found in the magnitudes of springtime efflux, surface water CO 2 concentrations, lake CO 2 storage, and meteorological conditions. Summertime measurements show a weak diurnal trend with a small average downward flux (−0.17 μmol m ‐2 s 1 ) to the lake's surface, while late fall flux was trendless and smaller (−0.0021 μmol m ‐2 s −1 ). Large springtime efflux afforded an opportunity to make direct measurement of lake‐atmosphere fluxes well above the detection limits of eddy covariance instruments, facilitating the testing of different gas flux methodologies and air‐water gas‐transfer models. Although there was an overall agreement in fluxes determined by eddy covariance and those calculated from lake‐water storage change in CO 2 , agreement was inconsistent between eddy covariance flux measurements and fluxes predicted by boundary‐layer and surface‐renewal models. Comparison of measured and modeled transfer velocities for CO 2 , along with measured and modeled cumulative CO 2 flux, indicates that in most instances the surface‐renewal model underpredicts actual flux. Greater underestimates were found with comparisons involving homogeneous boundary‐layer models. No physical mechanism responsible for the inconsistencies was identified by analyzing coincidentally measured environmental variables.

Limnology and Oceanography

Assessment of model estimates of land-atmosphere CO 2 exchange across northern Eurasia

A warming climate is altering land-atmosphere exchanges of carbon, with a potential for increased vegetation productivity as well as the mobilization of permafrost soil carbon stores. Here we investigate land-atmosphere carbon dioxide (CO 2 ) cycling through analysis of net ecosystem productivity (NEP) and its component fluxes of gross primary productivity (GPP) and ecosystem respiration (ER) and soil carbon residence time, simulated by a set of land surface models (LSMs) over a region spanning the drainage basin of Northern Eurasia. The retrospective simulations cover the period 1960–2009 at 0.5° resolution, which is a scale common among many global carbon and climate model simulations. Model performance benchmarks were drawn from comparisons against both observed CO 2 fluxes derived from site-based eddy covariance measurements as well as regional-scale GPP estimates based on satellite remote-sensing data. The site-based comparisons depict a tendency for overestimates in GPP and ER for several of the models, particularly at the two sites to the south. For several models the spatial pattern in GPP explains less than half the variance in the MODIS MOD17 GPP product. Across the models NEP increases by as little as 0.01 to as much as 0.79 g C m −2 yr −2 , equivalent to 3 to 340 % of the respective model means, over the analysis period. For the multimodel average the increase is 135 % of the mean from the first to last 10 years of record (1960–1969 vs. 2000–2009), with a weakening CO 2 sink over the latter decades. Vegetation net primary productivity increased by 8 to 30 % from the first to last 10 years, contributing to soil carbon storage gains. The range in regional mean NEP among the group is twice the multimodel mean, indicative of the uncertainty in CO 2 sink strength. The models simulate that inputs to the soil carbon pool exceeded losses, resulting in a net soil carbon gain amid a decrease in residence time. Our analysis points to improvements in model elements controlling vegetation productivity and soil respiration as being needed for reducing uncertainty in land-atmosphere CO 2 exchange. These advances will require collection of new field data on vegetation and soil dynamics, the development of benchmarking data sets from measurements and remote-sensing observations, and investments in future model development and intercomparison studies.

Biogeosciences

Synoptic analysis of a decade of daily measurements of SO2 emission in the troposphere from volcanoes of the global ground-based Network for Observation of Volcanic and Atmospheric Change

Volcanic plumes are common and far-reaching manifestations of volcanic activity during and between eruptions. Observations of the rate of emission and composition of volcanic plumes are essential to recognize and, in some cases, predict the state of volcanic activity. Measurements of the size and location of the plumes are important to assess the impact of the emission from sporadic or localized events to persistent or widespread processes of climatic and environmental importance. These observations provide information on volatile budgets on Earth, chemical evolution of magmas, and atmospheric circulation and dynamics. Space-based observations during the last decades have given us a global view of Earth's volcanic emission, particularly of sulfur dioxide ( SO 2 ). Although none of the satellite missions were intended to be used for measurement of volcanic gas emission, specially adapted algorithms have produced time-averaged global emission budgets. These have confirmed that tropospheric plumes, produced from persistent degassing of weak sources, dominate the total emission of volcanic SO 2 . Although space-based observations have provided this global insight into some aspects of Earth's volcanism, it still has important limitations. The magnitude and short-term variability of lower-atmosphere emissions, historically less accessible from space, remain largely uncertain. Operational monitoring of volcanic plumes, at scales relevant for adequate surveillance, has been facilitated through the use of ground-based scanning differential optical absorption spectrometer (ScanDOAS) instruments since the beginning of this century, largely due to the coordinated effort of the Network for Observation of Volcanic and Atmospheric Change (NOVAC). In this study, we present a compilation of results of homogenized post-analysis of measurements of SO 2 flux and plume parameters obtained during the period March 2005 to January 2017 of 32 volcanoes in NOVAC. This inventory opens a window into the short-term emission patterns of a diverse set of volcanoes in terms of magma composition, geographical location, magnitude of emission, and style of eruptive activity. We find that passive volcanic degassing is by no means a stationary process in time and that large sub-daily variability is observed in the flux of volcanic gases, which has implications for emission budgets produced using short-term, sporadic observations. The use of a standard evaluation method allows for intercomparison between different volcanoes and between ground- and space-based measurements of the same volcanoes. The emission of several weakly degassing volcanoes, undetected by satellites, is presented for the first time. We also compare our results with those reported in the literature, providing ranges of variability in emission not accessible in the past. The open-access data repository introduced in this article will enable further exploitation of this unique dataset, with a focus on volcanological research, risk assessment, satellite-sensor validation, and improved quantification of the prevalent tropospheric component of global volcanic emission.

Earth System Science Data

The new GFDL global atmosphere and land model AM2-LM2: Evaluation with prescribed SST simulations

The configuration and performance of a new global atmosphere and land model for climate research developed at the Geophysical Fluid Dynamics Laboratory (GFDL) are presented. The atmosphere model, known as AM2, includes a new gridpoint dynamical core, a prognostic cloud scheme, and a multispecies aerosol climatology, as well as components from previous models used at GFDL. The land model, known as LM2, includes soil sensible and latent heat storage, groundwater storage, and stomatal resistance. The performance of the coupled model AM2-LM2 is evaluated with a series of prescribed sea surface temperature (SST) simulations. Particular focus is given to the model's climatology and the characteristics of interannual variability related to El Nin??o-Southern Oscillation (ENSO). One AM2-LM2 integration was perfor med according to the prescriptions of the second Atmospheric Model Intercomparison Project (AMIP II) and data were submitted to the Program for Climate Model Diagnosis and Intercomparison (PCMDI). Particular strengths of AM2-LM2, as judged by comparison to other models participating in AMIP II, include its circulation and distributions of precipitation. Prominent problems of AM2-LM2 include a cold bias to surface and tropospheric temperatures, weak tropical cyclone activity, and weak tropical intraseasonal activity associated with the Madden-Julian oscillation. An ensemble of 10 AM2-LM 2 integrations with observed SSTs for the second half of the twentieth century permits a statistically reliable assessment of the model's response to ENSO. In general, AM2-LM2 produces a realistic simulation of the anomalies in tropical precipitation and extratropical circulation that are associated with ENSO. ?? 2004 American Meteorological Society.

Journal of Climate

Using high-frequency sampling to detect effects of atmospheric pollutants on stream chemistry

We combined information from long-term (weekly over many years) and short-term (high-frequency during rainfall and snowmelt events) stream water sampling efforts to understand how atmospheric deposition affects stream chemistry. Water samples were collected at the Sleepers River Research Watershed, VT, a temperate upland forest site that receives elevated atmospheric deposition of pollutants such as nitrogen (N) and mercury (Hg). Our use of high-frequency sampling documents responses of nutrients and mercury in streamflow to atmospheric deposition inputs to the watershed.

Conference Paper

Transmission of atmospherically deposited trace elements through an undeveloped, forested Maryland watershed

Retention and transmission of atmospherically-derived major (H + , Na + , K + , Ca 2+ , Mg 2+ , HCO 3 - , NO 3 - , SO 4 -2 , Cl - , SiO 2 ) and trace (Al, As, Cd, Cr, Cu, Fe, Mn, Ni, Pb, Se, and Zn) species were evaluated in an undeveloped forested watershed underlain by a rather inert quartzite lithology (Bear Branch, Catoctin State Forest, Thrumont, Maryland). These comparisons were based on atmospheric input to stream export over a period of 16 months. Both wet (precipitation) and total (bulk, including vegetative throughfall) atmospheric loading to the catchment were determined. Stream export was gauged based on systematic sampling of the stream under varied flow regimes. Additionally, watershed export of both dissolved and particulate trace element phases was examined during three high run-off intensives associated with summer storms.

Maryland