Geology topics

Research about Washington

Source-linked reports with geographic coverage including Washington.

At least 757 records · Page 42Linked to original sources

USGS2012

Updates to watershed modeling in the Potholes Reservoir basin, Washington-a supplement to Scientific Investigation Report 2009-5081

A previous collaborative effort between the U.S. Geological Survey and the Bureau of Reclamation resulted in a watershed model for four watersheds that discharge into Potholes Reservoir, Washington. Since the model was constructed, two new meteorological sites have been established that provide more reliable real-time information. The Bureau of Reclamation was interested in incorporating this new information into the existing watershed model developed in 2009, and adding measured snowpack information to update simulated results and to improve forecasts of runoff. This report includes descriptions of procedures to aid a user in making model runs, including a description of the Object User Interface for the watershed model with details on specific keystrokes to generate model runs for the contributing basins. A new real-time, data-gathering computer program automates the creation of the model input files and includes the new meteorological sites. The 2009 watershed model was updated with the new sites and validated by comparing simulated results to measured data. As in the previous study, the updated model (2012 model) does a poor job of simulating individual storms, but a reasonably good job of simulating seasonal runoff volumes. At three streamflow-gaging stations, the January 1 to June 30 retrospective forecasts of runoff volume for years 2010 and 2011 were within 40 percent of the measured runoff volume for five of the six comparisons, ranging from -39.4 to 60.3 percent difference. A procedure for collecting measured snowpack data and using the data in the watershed model for forecast model runs, based on the Ensemble Streamflow Prediction method, is described, with an example that uses 2004 snow-survey data.

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USGS2012

Fish population and habitat analysis in Buck Creek, Washington, prior to recolonization by anadromous salmonids after the removal of Condit Dam

We assessed the physical and biotic conditions in the part of Buck Creek, Washington, potentially accessible to anadromous fishes. This creek is a major tributary to the White Salmon River upstream of Condit Dam, which was breached in October 2011. Habitat and fish populations were characterized in four stream reaches. Reach breaks were based on stream gradient, water withdrawals, and fish barriers. Buck Creek generally was confined, with a single straight channel and low sinuosity. Boulders and cobble were the dominant stream substrate, with limited gravel available for spawning. Large-cobble riffles were 83 percent of the available fish habitat. Pools, comprising 15 percent of the surface area, mostly were formed by bedrock with little instream cover and low complexity. Instream wood averaged 6—10 pieces per 100 meters, 80 percent of which was less than 50 centimeters in diameter. Water temperature in Buck Creek rarely exceeded 16 degrees Celsius and did so for only 1 day at river kilometer (rkm) 3 and 11 days at rkm 0.2 in late July and early August 2009. The maximum temperature recorded was 17.2 degrees Celsius at rkm 0.2 on August 2, 2009. Minimum summer discharge in Buck Creek was 3.3 cubic feet per second downstream of an irrigation diversion (rkm 3.1) and 7.7 cubic feet per second at its confluence with the White Salmon River. Rainbow trout ( Oncorhynchus mykiss ) was the dominant fish species in all reaches. The abundance of age-1 or older rainbow trout was similar between reaches. However, in 2009 and 2010, the greatest abundance of age-0 rainbow trout (8 fish per meter) was in the most downstream reach. These analyses in Buck Creek are important for understanding the factors that may limit fish abundance and productivity, and they will help identify and prioritize potential restoration actions. The data collected constitute baseline information of pre-dam removal conditions that will allow assessment of changes in fish populations now that Condit Dam has been removed and anadromous fish have an opportunity to recolonize Buck Creek.

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USGS2012

North Cascades Ecoregion: Chapter 14 in Status and trends of land change in the Western United States--1973 to 2000

The North Cascades Ecoregion (Omernik, 1987; U.S. Environmental Protection Agency, 1997) covers approximately 30,421 km 2 (11,746 mi 2 ) of predominantly steep, mountainous terrain, home to peaks rising more than 3,000 m, which are carved by valleys that drop below 150 m elevation (fig. 1). The unique topography in this geographically isolated ecoregion has been shaped by glacial processes, and its deep drainage canyons have been further incised by subsequent runoff. Beautiful alpine scenery is a major feature of the ecoregion, which includes several national forests, parks, and wilderness areas such as the North Cascades National Park, the Mount Baker–Snoqualmie National Forest, the Okanogan National Forest, and the Wenatchee National Forest, as well as the Pasayten Wilderness, the Glacier Peak Wilderness, the Alpine Lakes Wilderness, and the Henry M. Jackson Wilderness.

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USGS2012

Puget Lowland Ecoregion: Chapter 2 in Status and trends of land change in the Western United States--1973 to 2000

The Puget Lowland Ecoregion covers an area of approximately 18,009 km² (6,953 mi²) within northwestern Washington (fig. 1) (Omernik, 1987; U.S. Environmental Protection Agency, 1997). The ecoregion is located between the Coast Range Ecoregion to the west, which includes the Olympic Mountains, and the North Cascades and the Cascades Ecoregions to the east, which include the Cascade Range. From the north, the ecoregion follows the Interstate 5 corridor, from the Canadian border south through Bellingham, Seattle, Olympia, and Longview, Washington, to the northern border of the Willamette Valley Ecoregion. The Puget Lowland Ecoregion borders the shoreline of the greater Puget Sound, a complex bay and saltwater estuary fed by spring freshwater runoff from the Olympic Mountains and Cascade Range watersheds. The ecoregion is situated in a continental glacial trough that has many islands, peninsulas, and bays. Relief is moderate, with elevations ranging from sea level to 460 m but averaging approximately 150 m (DellaSala and others, 2001). Proximity to the Pacific Ocean gives the Puget Lowland Ecoregion its mild maritime climate (U.S. Environmental Protection Agency, 1999). Mean annual temperature is 10.5°C, with an average of 4.1°C in January and 17.7°C in July (Guttman and Quayle, 1996). Average annual precipitation ranges from 800 to 900 mm, but some areas in the rain shadow of the Olympic Mountains receive as little as 460 mm (DellaSala and others, 2001). Varying annual average precipitation greatly influences vegetation and soil type in the ecoregion. In the Puget Lowland Ecoregion, soils are dominated by Inceptisols in the north and Ultisols in the south (Jones, 2003). Before European settlement, most of the ecoregion was covered by coniferous forests, with species composition dependent on local climate (U.S. Environmental Protection Agency, 1999). The World Wildlife Fund places the Puget Lowland Ecoregion in the Western Hemlock Vegetation Zone. Although this vegetation zone is named after the western hemlock (Tsuga heterophylla), Douglas-fir (Pseudotsuga menziesii) is the dominant tree species. Seattle, which had an estimated population of 563,376 in 2000, is the largest city in the Puget Lowland Ecoregion (Puget Sound Regional Council, 2001). The greater Seattle metropolitan area, comprising Seattle, Tacoma, Bellevue, and Bremerton, had an estimated population of 3.5 million people in 2000 (U.S. Census Bureau, 2000). Other sizable cities in the ecoregion include the state capital Olympia, as well as Tacoma, Bellingham, and Everett, Washington. The center of the Puget Lowland Ecoregion is dominated by the Seattle metropolitan area and developed land cover, whereas agriculture occurs mainly on river floodplains in the north and south. The remainder of the ecoregion area is dominated by forest land cover (fig. 1).

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USGS2012

Geologic map of the east half of the Bellevue South 7.5' x 15' quadrangle, Issaquah area, King County, Washington

The Issaquah area includes several of the most outstanding geologic features of the eastern Puget Lowland region. Folds have warped thousands of meters of Tertiary sedimentary and volcanic rocks. Several hundred meters of both glacial and postglacial sediment have accumulated in a deep glacial trough, which is now partly occupied by Lake Sammamish but which was previously the conduit for massive volumes of meltwater during ice-sheet occupation and retreat. The eastern projection of an east-west-oriented crustal structure, which reflects Tertiary through Holocene fault displacement, extends across the eastern part of the map area. In addition to these geologic features, some of the most rapid human alteration of the landscape in the entire Puget Lowland has occurred here. Since the 19th century, coal was extensively mined and, since the early 1980s, the region has been overtaken by urbanization. In places, this alteration has dramatically accelerated the rate of geomorphic processes. For example, the hillsides have been regraded as a result of mining and quarries throughout the southern one-third of the quadrangle; stream channels have recently incised above the eastern shores of Lake Sammamish; and sediments have deposited on the lakeshore and into the lake itself.

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USGS2012

Biodegradation of chloroethene compounds in groundwater at Operable Unit 1, Naval Undersea Warfare Center, Division Keyport, Washington, 1999-2010

The U.S. Geological Survey evaluated the biodegradation of chloroethene compounds in groundwater beneath the former landfill at Operable Unit 1 (OU 1) of the U.S. Naval Undersea Warfare Center (NUWC), Division Keyport. The predominant contaminants in groundwater are the chloroethene compounds trichloroethene, cis -1,2-dichloroethene, and vinyl chloride. The remedy selected for groundwater contamination at OU 1 includes phytoremediation and natural attenuation. In 1999, the U.S. Navy planted two hybrid poplar plantations, referred to as the northern and southern plantations, over the most contaminated parts of the landfill. The U.S. Navy monitors tree health, groundwater levels, and contaminant concentrations to assess the effectiveness of phytoremediation. The U.S. Geological Survey began a cooperative effort with the U.S. Navy in 1995 to monitor the effectiveness of natural attenuation processes for removing and controlling the migration of chloroethenes and chloroethanes. Field and laboratory studies from 1996 through 2000 demonstrated that biodegradation of chloroethenes and chloroethanes in shallow groundwater at OU 1 was substantial. The U.S. Geological Survey monitored geochemical and contaminant concentrations in groundwater annually from 2001 through 2010. This report presents groundwater geochemical and contaminant data collected by the U.S. Geological Survey during June 2010 and evaluates evidence for continued biodegradation of chloroethenes in groundwater. Geochemical and contaminant concentration data through 2010 indicate that biodegradation of chloroethenes in groundwater continued beneath the landfill at OU 1. Contaminant concentrations in groundwater decreased beneath most of the 9-acre landfill between 1999 and 2010. The evidence indicating that biodegradation was a primary cause for the decreased concentrations included decreasing ratios of more highly chlorinated compounds to less chlorinated compounds over time, and widespread detections of non-chlorinated biodegradation end-products ethane and ethene. No widespread changes in groundwater reduction-oxidation (redox) conditions were observed that could result in either more or less efficient biodegradation. Even with continued biodegradation, dissolved-phase contaminant concentrations in the tens of milligrams per liter have persisted beneath part of the 0.7-acre southern plantation. The magnitude and persistence of those concentrations indicate that non-aqueous phase liquid chloroethenes likely are present beneath the southern plantation and are not substantially affected by biodegradation. During 2010, chloroethenes continued to be measured in shallow groundwater samples from the southern part of the adjacent marsh, although at the lowest concentrations ever measured. Flux calculations based on 2010 data indicate that 95 percent of dissolved-phase chloroethenes in the upper aquifer beneath the southern landfill were degraded before discharging to surface water. Overall, biodegradation of chloroethenes in groundwater throughout OU 1 continued through 2010, and it prevented most of the mass of dissolved-phase chloroethenes in the upper aquifer beneath the landfill from discharging to surface water.

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USGS2012

Analysis of streamflow-gaging network for monitoring stormwater in small streams in the Puget Sound Basin, Washington

The streamflow-gaging network in the Puget Sound basin was analyzed for its capacity to monitor stormwater in small streams. The analysis consisted of an inventory of active and inactive gages and an evaluation of the coverage and resolution of the gaging network with an emphasis on lowland areas. The active gaging network covers much of the Puget Lowland largely by gages located at sites on larger streams and rivers. Assessments of stormwater impacts and management will likely require streamflow information with higher spatial resolution than provided by the current gaging network. Monitoring that emphasizes small streams in combination with approaches for estimating streamflow at ungaged sites provides an alternative to expanding the current gaging network that can improve the spatial resolution of streamflow information in the region. The highest priority gaps in the gaging network are low elevation basins close to the Puget Sound shoreline and sites that share less than 10 percent of the drainage area of an active gage. Although small, lowland sites with long records of streamflow are particularly valuable to maintain in the region, other criteria for prioritizing sites in the gaging network should be based on the specific questions that stormwater managers need to answer.

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USGS2012

Quality of water in the White River and Lake Tapps, Pierce County, Washington, May-December 2010

The White River and Lake Tapps are part of a hydropower system completed in 1911–12. The system begins with a diversion dam on the White River that routes a portion of White River water into the southeastern end of Lake Tapps, which functioned as a storage reservoir for power generation. The stored water passed through the hydroelectric facilities at the northwestern end of the lake and returned to the White River through the powerhouse tailrace. Power generation ceased in January 2004, which altered the hydrology of the system by reducing volumes of water diverted out of the river, stored, and released through the powerhouse. This study conducted from May to December 2010 created a set of baseline data collected under a new flow regime for selected reaches of the White River, the White River Canal (Inflow), Lake Tapps Diversion (Tailrace) at the powerhouse, and Lake Tapps. Three sites, one on the White River at Headworks, one on the White River at R Street, and one on the Tailrace, were equipped for continuous recording of water-quality data, and three sites (Headworks, White River Canal Inflow, and Tailrace) were sampled for discrete water-quality data. Nine lake sites were measured for physical and water-quality properties and samples were collected for analyses of nutrients, suspended solids, and fecal-coliform bacteria concentrations. Samples from the lake also were analyzed for concentrations of chlorophyll a and organic chemicals. Discrete samples indicated that water from the White River, White River Canal Inflow, and Tailrace sites generally was turbid, warm, chemically dilute, and well-oxygenated. Exceptions occurred at the sites when flow to the White River Canal was suspended or when little or no flow was released from the lake into the Tailrace. The quality of physical properties and concentrations in water measured continuously at the three sites generally was good and met the freshwater criteria designated by Washington State Department of Ecology for recreational and aquatic-life uses, with several exceptions. The 7-day average of daily maximum temperatures (7–DADMax) was greater than the freshwater aquatic life criterion of 16 degrees Celsius (°C) for core summer salmonid habitat on 6 days at the Headworks site and 37 days at the R-Street site during the study. The 7-DADMax temperatures were greater than the 13°C criterion for spawning, rearing, and incubation on 6 days at the Headworks site and 20 days at the R-Street site. The freshwater aquatic life criterion for dissolved oxygen of 9.5 milligrams per liter (mg/L) for core summer salmonid habitat was not met at the Headworks and R-Street sites for periods during July and August 2010. Exceptions also occurred at the Headworks site for measurements of pH, which were greater than the aquatic life upper limit of 8.5 pH units during July 2010. Aquatic life pH criteria were not met at the Tailrace site during June, July, and August 2010, when pH was greater than 8.5 pH units, and during August 2010 when pH decreased to less than 6.5 pH units. Lake Tapps water near the surface was relatively clear, warm, and well oxygenated. The clearest water of the nine lake sites was at the Deep site with a median Secchi disk transparency measurement of 6.05 m (meters), which represents a two- to six-fold increase over historical measurements of transparency at this location. Median water temperatures were 18.2–18.9°C and maximums were from 22.9–25.0°C. Median dissolved oxygen concentrations were greater than 8.42 mg/L and minimums generally were not lower than 7.4 mg/L. By early July 2010, weak thermal stratification developed at most lake sites into at least a warm surface layer overlying a small thermocline. A well-defined hypolimnion developed below the thermocline only at the Deep site. With the development of thermal stratification, hypolimnion water became anoxic at several sites (Deep, Tapps Island, Snag Island, and Lake Outlet). By late September 2010, an anoxic layer about 15 m thick had formed in the hypolimnion of the Deep site. Mixing during autumn overturn in late November re-oxygenated the water column of all the sites with about 10–12 mg/L of dissolved oxygen. On the basis of pH and specific conductance measurements, Lake Tapps water is pH neutral and chemically dilute. Median pH values for water in the epilimnion and the hypolimnion ranged from 6.84 to 7.64 pH units and maximums did not exceed 7.8 pH units at any site. Median specific conductance was typically less than 70 microsiemens per centimeter at 25°C for the epilimnion and the hypolimnion. Concentrations of nutrients and chlorophyll a in Lake Tapps were low. At most of the sites and in most of the samples from the epilimnion, total phosphorus concentrations were less than the Washington State Department of Ecology phosphorus criterion of 0.01 mg/L for maintaining oligotrophic conditions. Median concentrations of total nitrogen (unfiltered water) ranged from about 0.14 mg/L (Deep, Tapps Island, and Dike 2B sites) to about 0.18 mg/L (Allan Yorke and Lake Inlet sites). Chlorophyll a concentrations were low with median concentrations of 2.16 micrograms per liter (mg/L) or less. The majority of chlorophyll a concentrations were well below the Oregon Department of Environmental Quality action level of 10 mg/L. Using the Carlson Trophic-Status Index and average measures of transparency, chlorophyll a , and total phosphorus data from this study, Lake Tapps generally fits within the oligotrophic classification, but with a few exceptions. At Allan Yorke, Lake Inlet, and Southeast Arm sites, the chlorophyll a and total phosphorus indexes of nearly 40 approach the upper limit of oligotrophic conditions. In addition, average concentrations of total phosphorus at Lake Inlet and Southeast Arm are at Nürnberg's (1996) threshold concentration of 0.01 mg/L, which suggests a slight tendency towards mesotrophic conditions at these two sites during summer July–September. On the basis of epilimnetic nitrogen to phosphorus concentration ratios of greater than 17, Lake Tapps primary production is phosphorus limited at all but two study sites. At the Lake Inlet and Southeast Arm sites, ratios of 15 and 16, respectively, for the summer period suggest either nitrogen or phosphorus (or both) may limit algal growth. Water samples collected at the Allan Yorke, Snag Island, and Lake Outlet study sites were screened for the presence of more than 250 organic chemicals. A total of 14 compounds were detected in trace amounts (or determined to be present) at one or more of the 3 sites. The Allan Yorke site had 9 detections, the Snag Island site had 10 detections, and the Lake Outlet site had 5 detections of compounds mostly belonging to the group of wastewater indicator chemicals. Compounds detected (or with verified presence) at all three sites included the herbicide 2,4-D, the insecticide and mosquito repellant DEET, the herbicide fluridone used for Eurasian watermilfoil eradication, and the herbicide prometon. The largest concentrations of these compounds were in samples from the Allan Yorke site; the lowest concentrations were from the Lake Outlet site.

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USGS2012

Simulation of streamflows and basin-wide hydrologic variables over several climate-change scenarios, Methow River basin, Washington

The purpose of this project was to demonstrate the capabilities of an existing watershed model and downscaling procedures to provide simulated hydrological data over various greenhouse gas emission scenarios for use in the Methow River framework prototype. An existing watershed model was used to simulate daily time series of streamflow and basin-wide hydrologic variables for baseline conditions (1990–2000), and then for all combinations of three greenhouse gas emission scenarios and five general circulation models for future conditions (2008–2095). Input data for 18 precipitation and 17 temperature model input sites were generated using statistical techniques to downscale general circulation model data. The simulated results were averaged using an 11-year moving window to characterize the central year of the window to provide simulated data for water years 2008–2095. Simulation results indicate that substantial changes of monthly mean streamflows will occur. For all greenhouse gas emission scenarios, the future streamflows are greater in the winter than baseline conditions because a greater percentage of future precipitation is projected to fall as rain rather than as snow. The simulated future spring streamflows are less than baseline conditions because the spring snowpacks are smaller; therefore, flow contributions from snowmelt are less. A database was developed to automate model execution and to provide users with Internet access to voluminous data products ranging from summary figures to model output timeseries. Database-enabled Internet tools were developed to allow users to create interactive graphs of output results based on their analysis needs. For example, users were able to create graphs by selecting time intervals, greenhouse gas emission scenarios, general circulation models, and specific hydrologic variables.

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USGS2012

Analysis of low flows and selected methods for estimating low-flow characteristics at partial-record and ungaged stream sites in western Washington

A regional low-flow survey of small, perennial streams in western Washington was initiated by the Northwest Indian Fisheries Commission (NWIFC), NWIFC-member tribes, and Point-No-Point Treaty Council in cooperation with the U.S. Geological Survey in 2007 and repeated by the tribes during the low-flow seasons of 2008–09. Low-flow measurements at 63 partial-record and miscellaneous streamflow-measurement sites during surveys in 2007–09 are used with concurrent flows at continuous streamflow-gaging stations (index sites) within the U.S. Geological Survey network to estimate the low-flow metric Q 7,10 at each measurement site (Q 7,10 is defined as the lowest average streamflow for a consecutive 7-day period that recurs on average once every 10 years). Index-site correlation methods for estimating low-flow characteristics at partial-record sites are reviewed and an empirical Monte Carlo technique is used with the daily streamflow record at 43 index sites to determine the error and bias associated with estimating the Q 7,10 at synthetic partial-record sites using three methods: Q-ratio, MOVE.1, and Base-Flow Correlation. The Q-ratio method generally has the lowest error and least amount of bias for 170 scenarios, with each scenario defined by the number of concurrent flow measurements between the partial-record and index sites (ranging from 4 to 20) and the combination of basin attributes used to select the index site. The root-mean square error for the Q-ratio method ranged from 70 to 118 percent, depending on the scenario. The scenario with the smallest root-mean square error used four concurrent flow measurements and the basin attributes: basin area, mean annual precipitation, and base-flow recession time constant, also referred to as tau (τ). Regional low-flow regression models for estimating Q 7,10 at ungaged stream sites are developed from the records of daily discharge at 65 continuous gaging stations (including 22 discontinued gaging stations) for the purpose of evaluating explanatory variables. By incorporating the base-flow recession time constant τ as an explanatory variable in the regression model, the root-mean square error for estimating Q 7,10 at ungaged sites can be lowered to 72 percent (for known values of τ), which is 42 percent less than if only basin area and mean annual precipitation are used as explanatory variables. If partial-record sites are included in the regression data set, τ must be estimated from pairs of discharge measurements made during continuous periods of declining low flows. Eight measurement pairs are optimal for estimating τ at partial-record sites, and result in a lowering of the root-mean square error by 25 percent. A low-flow survey strategy that includes paired measurements at partial-record sites requires additional effort and planning beyond a standard strategy, but could be used to enhance regional estimates of τ and potentially reduce the error of regional regression models for estimating low-flow characteristics at ungaged sites.

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USGS2012

Sources and sinks of nitrogen and phosphorus to a deep, oligotrophic lake, Lake Crescent, Olympic National Park, Washington

Lake Crescent, in Olympic National Park in the northwest corner of Washington State is a deep-water lake renowned for its pristine water quality and oligotrophic nature. To examine the major sources and sinks of nutrients (as total nitrogen, total phosphorus, and dissolved nitrate), a study was conducted in the Lake Crescent watershed. The study involved measuring five major inflow streams, the Lyre River as the major outflow, recording weather and climatic data, coring lake bed sediment, and analyzing nutrient chemistry in several relevant media over 14 months. Water samples for total nitrogen, total phosphorous, and dissolved nitrate from the five inflow streams, the outlet Lyre River, and two stations in the lake were collected monthly from May 2006 through May 2007. Periodic samples of shallow water from temporary sampling wells were collected at numerous locations around the lake. Concentrations of nutrients detected in Lake Crescent and tributaries were then applied to the water budget estimates to arrive at monthly and annual loads from various environmental components within the watershed. Other sources, such as leaf litter, pollen, or automobile exhaust were estimated from annual values obtained from various literature sources. This information then was used to construct a nutrient budget for total nitrogen and total phosphorus. The nitrogen budget generally highlights vehicle traffic-diesel trucks in particular-along U.S. Highway 101 as a potential major anthropogenic source of nitrogen compounds in the lake. In contrast, contribution of nitrogen compounds from onsite septic systems appears to be relatively minor related to the other sources identified.

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USGS2012

Sources and sinks of filtered total mercury and concentrations of total mercury of solids and of filtered methylmercury, Sinclair Inlet, Kitsap County, Washington, 2007-10

The majority of filtered total mercury in the marine water of Sinclair Inlet originates from salt water flowing from Puget Sound. About 420 grams of filtered total mercury are added to Sinclair Inlet each year from atmospheric, terrestrial, and sedimentary sources, which has increased filtered total mercury concentrations in Sinclair Inlet (0.33 nanograms per liter) to concentrations greater than those of the Puget Sound (0.2 nanograms per liter). The category with the largest loading of filtered total mercury to Sinclair Inlet included diffusion of porewaters from marine sediment to the water column of Sinclair Inlet and discharge through the largest stormwater drain on the Bremerton naval complex, Bremerton, Washington. However, few data are available to estimate porewater and stormwater releases with any certainty. The release from the stormwater drain does not originate from overland flow of stormwater. Rather total mercury on soils is extracted by the chloride ions in seawater as the stormwater is drained and adjacent soils are flushed with seawater by tidal pumping. Filtered total mercury released by an unknown freshwater mechanism also was observed in the stormwater flowing through this drain. Direct atmospheric deposition on the Sinclair Inlet, freshwater discharge from creek and stormwater basins draining into Sinclair Inlet, and saline discharges from the dry dock sumps of the naval complex are included in the next largest loading category of sources of filtered total mercury. Individual discharges from a municipal wastewater treatment plant and from the industrial steam plant of the naval complex constituted the loading category with the third largest loadings. Stormwater discharge from the shipyard portion of the naval complex and groundwater discharge from the base are included in the loading category with the smallest loading of filtered total mercury. Presently, the origins of the solids depositing to the sediment of Sinclair Inlet are uncertain, and consequently, concentrations of sediments can be qualitatively compared only to total mercury concentrations of solids suspended in the water column. Concentrations of total mercury of suspended solids from creeks, stormwater, and even wastewater effluent discharging into greater Sinclair Inlet were comparable to concentrations of solids suspended in the water column of Sinclair Inlet. Concentrations of total mercury of suspended solids were significantly lower than those of marine bed sediment of Sinclair Inlet; these suspended solids have been shown to settle in Sinclair Inlet. The settling of suspended solids in the greater Sinclair Inlet and in Operable Unit B Marine of the naval complex likely will result in lower concentrations of total mercury in sediments. Such a decrease in total mercury concentrations was observed in the sediment of Operable Unit B Marine in 2010. However, total mercury concentrations of solids discharged from several sources from the Bremerton naval complex were higher than concentrations in sediment collected from Operable Unit B Marine. The combined loading of solids from these sources is small compared to the amount of solids depositing in OU B Marine. However, total mercury concentration in sediment collected at a monitoring station just offshore one of these sources, the largest stormwater drain on the Bremerton naval complex, increased considerably in 2010. Low methylmercury concentrations were detected in groundwater, stormwater, and effluents discharged from the Bremerton naval complex. The highest methylmercury concentrations were measured in the porewaters of highly reducing marine sediment in greater Sinclair Inlet. The marine sediment collected off the largest stormwater drain contained low concentrations of methylmercury in porewater because these sediments were not highly reducing.

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USGS2012

Simulation of groundwater and surface-water resources and evaluation of water-management alternatives for the Chamokane Creek basin, Stevens County, Washington

A three-dimensional, transient numerical model of groundwater and surface-water flow was constructed for Chamokane Creek basin to better understand the groundwater-flow system and its relation to surface-water resources. The model described in this report can be used as a tool by water-management agencies and other stakeholders to quantitatively evaluate the effects of potential increases in groundwater pumping on groundwater and surface-water resources in the basin. The Chamokane Creek model was constructed using the U.S. Geological Survey (USGS) integrated model, GSFLOW. GSFLOW was developed to simulate coupled groundwater and surface-water resources. The model uses 1,000-foot grid cells that subdivide the model domain by 102 rows and 106 columns. Six hydrogeologic units in the model are represented using eight model layers. Daily precipitation and temperature were spatially distributed and subsequent groundwater recharge was computed within GSFLOW. Streamflows in Chamokane Creek and its major tributaries are simulated in the model by routing streamflow within a stream network that is coupled to the groundwater-flow system. Groundwater pumpage and surface-water diversions and returns specified in the model were derived from monthly and annual pumpage values previously estimated from another component of this study and new data reported by study partners. The model simulation period is water years 1980-2010 (October 1, 1979, to September 30, 2010), but the model was calibrated to the transient conditions for water years 1999-2010 (October 1, 1998, to September 30, 2010). Calibration was completed by using traditional trial-and-error methods and automated parameter-estimation techniques. The model adequately reproduces the measured time-series groundwater levels and daily streamflows. At well observation points, the mean difference between simulated and measured hydraulic heads is 7 feet with a root-mean-square error divided by the total difference in water levels of 4.7 percent. Simulated streamflow was compared to measured streamflow at the USGS streamflow-gaging station-Chamokane Creek below Falls, near Long Lake (12433200). Annual differences between measured and simulated streamflow for the site ranged from -63 to 22 percent. Calibrated model output includes a 31-year estimate of monthly water budget components for the hydrologic system. Five model applications (scenarios) were completed to obtain a better understanding of the relation between groundwater pumping and surface-water resources. The calibrated transient model was used to evaluate: (1) the connection between the upper- and middle-basin groundwater systems, (2) the effect of surface-water and groundwater uses in the middle basin, (3) the cumulative impacts of claims registry use and permit-exempt wells on Chamokane Creek streamflow, (4) the frequency of regulation due to impacted streamflow, and (5) the levels of domestic and stockwater use that can be regulated. The simulation results indicated that streamflow is affected by existing groundwater pumping in the upper and middle basins. Simulated water-management scenarios show streamflow increased relative to historical conditions as groundwater and surface-water withdrawals decreased.

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USGS2012

Arrival and expansion of the invasive foraminifera Trochammina hadai Uchio in Padilla Bay, Washington

Trochammina hadai Uchio, a benthic foraminifera native to Japanese estuaries, was first identified as an invasive in 1995 in San Francisco Bay and later in 16 other west coast estuaries. To investigate the timing of the arrival and expansion of this invasive species in Padilla Bay, Washington, we analyzed the distribution of foraminifera in two surface samples collected in 1971, in nine surface samples collected by Scott in 1972–1973, as well as in two cores (Padilla Flats 3 and Padilla V1/V2) obtained in 2004. Trochanimina hadai , originally identified as the native Trochammina pacifica Cushman in several early foraminiferal studies, dominates the assemblage of most of the surface samples. In the Padilla V1/V2 and Padilla Flats 3 cores, the species' abundance follows a pattern of absence, first appearance, rapid expansion commonly seen shortly after the arrival of a successful biological invasion, setback, and second expansion. Using Q-mode cluster analysis, pre-expansion and expansion assemblages were identified. Pb-210 dating of these cores proved unsuccessful. However, based on T. hadai's first appearance occurring stratigraphically well above sedimentological changes in the cores that reflect deposition of sediments in the bay due to previous diversions of the Skagit River, and its dominance in the early 1970s surface samples, we conclude that the species arrived in Padilla Bay somewhere between the late 1800s and 1971. Trochammina hadai may have been introduced into the bay in the 1930s when oyster culturing began there or, at a minimum, ten years prior to its appearance in San Francisco Bay.

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USGS2012

Temporal genetic monitoring of hybridization between native westslope cutthroat trout and introduced rainbow trout in the Stehekin River, Washington

Introgressive hybridization with introduced rainbow trout (RBT) ( Oncorhynchus mykiss ) has led to the loss of native cutthroat trout species ( O. clarkii ) throughout their range, creating conservation concerns. Monitoring temporal hybridization trends provides resource managers with a tool for determining population status and information for establishing conservation goals for native cutthroat trout. In this study, we re-sampled six locations in 2010 within the Stehekin River watershed, North Cascades National Park, which were originally sampled between 1999 and 2003. We used genetic markers to monitor changes in hybridization levels between sampling periods in the native westslope cutthroat trout (WCT) ( O. c. lewisi ) stemming from past RBT introductions. Additionally, two new locations from the lower Stehekin drainage were added to the baseline data. We found that the frequency of WCT, RBT, and their hybrids was not significantly different between monitoring periods, but that RBT allele frequencies decreased in two locations and increased in one location. We also found a consistent, substantial reduction in the frequency of RBT alleles over the monitoring period in the Stehekin River upstream of Bridge Creek (SR3) compared to the Stehekin River downstream of Bridge Creek (SR1 -2) and within lower Bridge Creek (BR1) although these three locations are confined to a small geographic area (approximately 5 km). Ecological and/or evolutionary processes likely restrict the dispersal of RBT alleles in the Stehekin River upstream of Bridge Creek.

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USGS2012

Recent population trends of mountain goats in the Olympic Mountains, Washington

Mountain goats ( Oreamnos americanus ) were introduced in Washington's Olympic Mountains during the 1920s. The population subsequently increased in numbers and expanded in range, leading to concerns by the 1970s over the potential effects of non-native mountain goats on high-elevation plant communities in Olympic National Park. The National Park Service (NPS) transplanted mountain goats from the Olympic Mountains to other ranges between 1981 and 1989 as a means to manage overabundant populations, and began monitoring population trends of mountain goats in 1983. We estimated population abundance of mountain goats during 18–25 July 2011, the sixth survey of the time series, to assess current population status and responses of the population to past management. We surveyed 39 sample units, comprising 39% of the 59,615-ha survey area. We estimated a population of 344 ± 72 (90% confidence interval [CI]) mountain goats in the survey area. Retrospective analysis of the 2004 survey, accounting for differences in survey area boundaries and methods of estimating aerial detection biases, indicated that the population increased at an average annual rate of 4.9% since the last survey. That is the first population growth observed since the cessation of population control measures in 1990. We postulate that differences in population trends observed in western, eastern, and southern sections of the survey zone reflected, in part, a variable influence of climate change across the precipitation gradient in the Olympic Mountains.

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USGS2012

Evaluation of stream flow effects on smolt survival in the Yakima River basin, Washington

Study Summary The influence of stream flow on salmon smolt emigration survival is a topic of widespread management interest. We collected smolt survival data to inform flow management decisions in the Yakima Basin. The Yakima River watershed drains the eastern slopes of the Cascade Mountain Range in central Washington State. The upper basin is comprised of two major tributaries–the Naches River and the upper Yakima River. Headwater storage reservoirs capture runoff during the winter and spring seasons to support downstream irrigation needs. During summer months, water is conveyed through the upper Yakima River and diverted at Roza Dam, a major irrigation diversion that supplies water to the Roza Irrigation District and to a hydroelectric plant located near Yakima, Washington. To assess smolt survival in the 18 km reach downstream of Roza Dam, a radio telemetry project will be carried out over a three-year timeframe. The first year of study was designed to provide baseline survival estimates at two distinct flow treatments during the spring migration period. The goal was to establish flow treatments that were as divergent as possible in order to maximize the observed effect of environmental conditions on smolt survival. In total, three experimental trials were carried out in 2012–one during low flow conditions (<600 cfs) and two during high flows (>3000 cfs). Data from the first year will be used to determine experimental design requirements to adequately address study objectives in years two and three. In the spring of 2012, fixed telemetry monitoring stations were established in strategic locations upstream and downstream of Roza Dam. Yearling Chinook salmon Oncorhynchus tshawytscha smolts originating from Cle Elum Hatchery were captured at the Roza Dam fish screen bypass facility, implanted with radio tags, and released upstream of Roza Dam. Each release group of 50 fish was paired with a high or low flow condition. Fish movements were tracked as tagged fish passed each monitoring station during their migration down the upper Yakima River, through Roza Dam, past the Naches River confluence, and eventually through Sunnyside and Prosser Dams. At the conclusion of field data collection, survival rates for each release group were calculated using Cormack-Jolly-Seber mark-recapture models. Yearling Chinook smolt survival and travel time estimates from 2012 suggest that migration rates and survival rates in the Roza Reach may be associated with stream flow, water temperature, release timing (i.e. migratory disposition), and fish size, but the extent to which each variable influenced survival is yet to be determined. The lowest survival rate (61%) and longest travel time (median 2.26 days) was observed in Release Group 1, which had the smallest size distribution and experienced the lowest flows, lowest temperatures, and earliest release date among the three groups. Release Groups 2 and 3 survived at 96% and 98% respectively and traveled through the Roza Reach in less than eight hours. The primary focus of years two and three of this study will be to collect data that minimizes the effect of confounding explanatory variables, so that flow effects on emigration survival can be quantified independent of these other influential factors.

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USGS2012

Use of acoustic telemetry to evaluate survival and behavior of juvenile salmonids at hydroelectric dams: A case study from Rocky Reach Dam, Columbia River, USA: Chapter 8.1

Telemetry provides a powerful and flexible tool for studying fish and other aquatic animals, and its use has become increasingly commonplace. However, telemetry is gear intensive and typically requires more specialized knowledge and training than many other field techniques. As with other scientific methods, collecting good data is dependent on an understanding of the underlying principles behind the approach, knowing how to use the equipment and techniques properly, and recognizing what to do with the data collected. This book provides a road map for using telemetry to study aquatic animals, and provides the basic information needed to plan, implement, and conduct a telemetry study under field conditions. Topics include acoustic or radio telemetry study design, tag implantation techniques, radio and acoustic telemetry principles and case studies, and data management and analysis. Chapters are written by biologists, technicians, and engineers from the private, academic, and government sectors, with decades of experience using these technologies.

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