Geology topics

Research about Washington

Source-linked reports with geographic coverage including Washington.

At least 325 records · Page 18Linked to original sources

USGS2019

Evaluation of environmental DNA surveys for identifying occupancy and spatial distribution of Pacific Lamprey (Entosphenus tridentatus) and Lampetra spp. in a Washington coast watershed

Surveys of environmental DNA (eDNA) have become an important and multifaceted tool for monitoring and identifying distributions and occupancy of aquatic species. This tool is attractive because it is powerful, easy to apply, and provides an alternative to traditional field survey methods. However, validating eDNA survey methods against traditional field survey methods is warranted prior to their application. We used eDNA and electrofishing to survey 10 sites in 3 tributaries of the Chehalis River, Washington, to infer distribution and occupancy of Entosphenus tridentatus and Lampetra spp. Both methods produced similar detection rates for E . tridentatus , and Lampetra spp. were detected at slightly greater frequency with eDNA in the Black River and Skookumchuck River. Within each of the three tributaries, eDNA concentration was negatively related to sample distance from the Chehalis River mainstem for E . tridentatus but not for Lampetra spp., which indicates E . tridentatus and Lampetra spp. may be distributed differently within tributaries. Application of lamprey eDNA data to a multiscale occupancy model indicated high probability of detecting eDNA in water samples and quantitative PCR (qPCR) assays. Broad distribution and high detection of E. tridentatus and Lampetra spp. suggest robust populations inhabit the Chehalis River basin. Our findings suggest eDNA surveys may be comparable to electrofishing for informing lamprey occupancy and distributions. Such sampling is efficient and cost‐effective and we anticipate that eDNA surveys will become a valuable tool in addressing key research and monitoring needs for conservation and restoration of lampreys in general.

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USGS2019

Enhanced landslide mobility by basal liquefaction: the 2014 SR530 (Oso), Washington landslide

Landslide mobility can vastly amplify the consequences of slope failure. As a compelling example, the March 22, 2014 landslide near Oso, Washington (USA) was particularly devastating, traveling across a 1-km+ wide river valley, killing 43 people, destroying dozens of homes, and temporarily closing a well-traveled highway. To resolve causes for the landslide’s behavior and mobility, we conducted detailed post-event field investigations and material testing. Geologic and structure mapping revealed a progression of geomorphological structures ranging from debris flow lobes at the distal end, through hummock fields, laterally continuous landslide blocks, back-rotated blocks, and finally colluvial slides and falls at the landslide headscarp. Primary structures, as well as stratigraphic and vegetation patterns, in the landslide deposit indicated rapid extensional motion of the approximately nine-million-m3 source volume in a closely timed sequence of events. We identified hundreds of transient sand boils in the landslide runout zone – evidence of widespread elevated pore-water pressures with consequent shear-strength reduction at the base of the slide. During the event, underlying wet alluvium liquefied and allowed quasi-intact slide hummocks to extend and translate long distances across the flat valley. Most of the slide material itself did not liquefy. Using geotechnical testing and numerical modeling, we examined rapid undrained loading, shear and collapse of loose saturated alluvium, and strong ground shaking as potential liquefaction mechanisms. Our analyses show that some layers in the alluvium can liquefy when sheared, as could occur with rapid undrained loading. Simultaneous ground shaking could have contributed to pore-pressure generation as well. Two key elements, a large and rapid failure overriding wet liquefiable sediments, enabled the landslide’s high mobility. Basal liquefaction may enhance mobility of other landslides in similar settings.

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USGS2019

Source-dependent amplification of earthquake ground motions in deep sedimentary basins

Deep sedimentary basins amplify long-period shaking from seismic waves, increasing the seismic hazard for cities within such basins. We perform 3-D simulations of point source earthquakes distributed around the Seattle and Tacoma basins in Washington State, to examine the dependence of basin amplification on source azimuth, depth, and earthquake type. For periods between 1-10 s, the pattern of amplification is spatially heterogeneous and differs considerably with the source-to-site azimuth. For close-in earthquakes, the greatest basin amplification occurs towards the far side of the basin and ground motions from crustal earthquakes experience greater amplification than those from more vertically-incident, deeper intraplate earthquakes. Love and Rayleigh waves form similar spatial patterns for a given source location, although the magnitude of amplification varies. The source dependence of basin amplification is an important factor for seismic hazard assessment, both in the Seattle and Tacoma basins, and by extension for deep sedimentary basins worldwide.

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USGS2019

Distribution of adult Chinook salmon (Oncorhynchus tshawytscha) in relation to water temperatures, Lake Scanewa, Cowlitz River, Washington, 2012

A trap-and-haul program is operated to move anadromous Pacific salmon ( Oncorhynchus spp.) around dams and reservoirs in the Cowlitz River basin, Washington. The primary release site for adult fish is in Lake Scanewa, a small reservoir created by Cowlitz Falls Dam, the uppermost dam in the basin. Releases in the reservoir are terminated when reservoir water temperature is 16 degrees Celsius (°C) or greater to reduce the risk of exposing adult salmon and steelhead ( O. mykiss ) to thermal conditions known to be stressful for these species. When the water temperature limit is reached, fish are released into the Cowlitz and Cispus Rivers upstream of the reservoir. Concerns have been raised about fish presence in the reservoir during warm conditions, so an empirical evaluation of water temperatures selected by spring Chinook salmon ( O. tshawytscha ) in Lake Scanewa was requested by resource managers. We conducted the evaluation during June–October 2012. Water temperature in the reservoir was measured using a series of thermographs combined with daily measurements at the Cowlitz Falls Fish Facility. Temperature-use data were collected from 50 adult hatchery-origin spring Chinook salmon tagged with temperature-sensing radio transmitters and released into the reservoir. This approach yielded a total of 930,056 individual temperature-use records in the reservoir during the study. Tagged fish occupied water temperatures less than 16 °C during most of the study period. Water temperatures ranged from 5 to 18.5 °C during the study, peaking in mid-August. Overall, about 25 percent of the detections of tagged fish were in water temperatures in the 16–20 °C range. In August, tagged fish detections in the 18–20 °C range comprised 13 percent of the total detections, and the remainder of the detections were in water less than or equal to 17 °C. Results from the study indicate that adult hatchery-origin spring Chinook salmon were able to locate and use water temperatures in the reservoir less than levels associated with stress. However, we also observed that thermal conditions in the reservoir were cool relative to most other years during 2008–16. Additional research may be warranted to better understand thermal exposure of adult spring Chinook salmon during warmer years.

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USGS2019

Multidecadal geomorphic evolution of a profoundly disturbed gravel-bed river system—a complex, nonlinear response and its impact on sediment delivery

A 2.5-km3 debris avalanche during the 1980 eruption of Mount St. Helens reset the fluvial landscape of upper North Fork Toutle River valley. Since then, a new drainage network has formed and evolved. Cross-section surveys repeated over nearly 40 years at 16 locations along a 20-km reach of river valley document channel evolution, geomorphic processes, and their impacts on sediment delivery. We analyzed spatial and temporal changes in channel morphology using two new metrics: 1) a shape index that defines the degree of U-shaped or V-shaped valley geometry; and 2) an alluvial phase-space diagram that relates bed degradation or aggradation between consecutive surveys to increases or decreases in cross-section area. Metric relations reveal more diverse channel evolution than originally described by a simple, linear-response model of sequential channel initiation and incision; aggradation and widening; and subsequent episodic scour and fill with little change in bed elevation. Instead, vertical and lateral adjustments have been crucial processes intertwined throughout channel evolution. Channel evolution has followed a distinctly nonlinear and non-sequential trajectory, migrating through several phase spaces and involving varied combinations of (1) degradation and aggradation with widening and narrowing, (2) bed-level fluctuations with little change in cross-section area, and (3) changes in cross-section area with little change of bed elevation. Persistent channel widening and reworking of the channel bed presently drive elevated sediment delivery from this basin. Elevated sediment delivery is likely to persist until valley-floor widths greatly exceed that of the channel-migration corridor, and/or channel banks and valley walls stabilize.

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USGS2019

Movements of juvenile Pacific Lamprey (Entosphenus tridentatus) in the Yakima and Columbia Rivers, Washington, 2018—A pilot study using acoustic telemetry

Telemetry has been an invaluable tool to improve our understanding of adult Pacific Lamprey ( Entosphenus tridentatus ) movements and to guide management approaches to protect and restore this species of concern. Juvenile and larval lamprey, however, are much smaller than adults, and have not been monitored with telemetry because available transmitters have traditionally been too large. With funding from the U.S. Department of Energy and the U.S. Army Corps of Engineers, the Pacific Northwest National Laboratory developed a prototype micro-transmitter of appropriate size for use in small fish such as juvenile lampreys and eels. Through a collaborative research approach, we used these prototype transmitters to do a pilot level evaluation of juvenile lamprey (macrophthalmia) movements in the Yakima and Columbia Rivers in 2018. Our project monitored tagged lamprey using acoustic monitoring arrays installed and maintained for juvenile salmon ( Oncorhynchus spp.) migration studies done by our partners. The study was done in the lower Yakima River, Washington, from river mile 111 to the river mouth, and in the Columbia River, from the Yakima River mouth to Camas, Washington, downstream of Bonneville Dam. We released four groups of tagged lamprey from May 9 to 15, 2018. Two groups were released at the upper site (located at the State Route 24 bridge, about 4.5 river miles upstream of Wapato Dam), and two groups were released at the lower site (about 1.7 miles upstream of the Yakima River mouth). We detected 95.6 percent of the tagged lamprey, with more individuals detected in the Columbia River than in the Yakima River. Lamprey arrived at Bonneville Dam in an average of 8.0–9.6 days from the upper site (300 river miles) and in an average of 6.5 days from the lower site (193 river miles). Lamprey moved through the study area at an average rate of 30–35 miles per day and generally remained at each detection site for less than about 20 minutes. Most lamprey (63 percent) arrived at detection sites during periods of darkness, but some travel occurred during daylight and transitional light periods.

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USGS2019

Data management plan for the U.S. Geological Survey Washington Water Science Center

The primary mission of the U.S. Geological Survey (USGS) Water Mission Area is to collect and disseminate reliable, impartial, and timely information needed to understand the water resources of the Nation, including data on streamflow, groundwater, water quality, water use, and availability. Management of data throughout the entire data lifecycle is necessary to meet the mission and maintain the USGS reputation of producing high-quality data as the Nation’s primary earth-science information agency. This document describes the data management procedures of the USGS Washington Water Science Center, including responsibilities of staff and workflow procedures.

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USGS2019

A field evaluation of the growth and survival of age-0 Oncorhynchus mykiss tagged with 8-mm passive integrated transponder (PIT) tags

Background In fish tagging studies, tag size limits the size of fish that can be tagged, the fraction of a population that can be represented, and ultimately inferences that can be made about the study population, particularly when juvenile fish are the subject of interest. Introduction of an 8-mm passive integrated transponder (PIT) reduced the minimum taggable size of fish, but it has not been evaluated in field trials. We evaluated the growth and survival of age-0 Oncorhynchus mykiss tagged with 8-mm PIT tags in four streams in southwest Washington, USA. Results A total of 351 PIT tagged fish and 340 control fish (marked with pelvic fin clips) were released, but recapture rates were low, particularly for control fish. Growth in length and mass did not differ between small (42–54 mm) and large (55–64 mm) PIT tagged fish. There was a slightly positive, but weak, relation between tag burden and growth in mass; however, there was considerable variability in this relation ( R 2 = 0.115). Summer to autumn joint probability of fish surviving and remaining in the study area estimated with a Bayesian mark-recapture model ranged from 0.228 to 0.478 in study streams. We found no significant relation between tag burden and survival, suggesting neither tag burden nor fish size at tagging affected survival. Conclusions Although this study was limited in scope, it provided insight into how age-0 O. mykiss tagged with 8-mm PIT tags grew and survived under natural conditions. We showed that fish as small as 42 mm could be tagged without detrimental effects, which should allow researchers to represent a larger portion of study populations through PIT tagging.

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USGS2019

Adult sockeye salmon (Oncorhynchus nerka) behavior and movement from Roza Dam to Cle Elum Dam, Washington, 2018

An evaluation was conducted to describe adult sockeye salmon ( Oncorhynchus nerka ) upstream movement patterns from Roza Dam to Cle Elum Dam in the Yakima Basin, Washington. Sockeye salmon adults that arrive at Roza Dam are currently trapped and transported upstream of Cle Elum Dam because upstream fish-passage facilities are not currently in place at the dam. However, these facilities are being designed, so resource managers wanted to confirm that sockeye salmon could successfully move upstream through the Roza Dam-to-Cle Elum Dam reach. A total of 20 adult sockeye salmon were collected, tagged with a radio transmitter, and released at Roza Dam during July 2018. These fish were monitored using a series of fixed monitoring sites and mobile tracking for 2 months. All tagged sockeye salmon successfully moved upstream and were detected in the tailrace of Cle Elum Dam. Median elapsed time from release at Roza Dam to first detection at Cle Elum Dam was 17 days (d) and ranged from 7 to 30 d. We examined migration delay at the Town Ditch diversion dam by comparing elapsed time of detection at that site to elapsed time of detection at other sites in the study area. We found that median elapsed time at the Town Ditch site (19.7 hours) was substantially higher than median elapsed time at other sites (1.7 hours or less). This suggests that tagged sockeye salmon were delayed at the diversion dam. However, most tagged fish (75 percent) arrived at Cle Elum Dam within 20 d of release, and all fish arrived within 30 d, which suggests that delay at the diversion dam may be of little consequence. Our results suggest that adult sockeye salmon can readily migrate upstream from Roza Dam to Cle Elum Dam.

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USGS2019

Sediment storage and transport in the Nooksack River basin, northwestern Washington, 2006–15

The Nooksack River is a dynamic gravel-bedded river in northwestern Washington, draining off Mount Baker and the North Cascades into Puget Sound. Working in cooperation with the Whatcom County Flood Control Zone District, the U.S. Geological Survey studied topographic, hydrologic, and climatic data for the Nooksack River basin to document recent changes in sediment storage, long-term bed elevation trends, rates of sediment transport, and factors influencing surficial drainage in order to support ongoing river management. Differences in elevations between topographic and bathymetric surveys in 2005/06 and 2013/15 indicate the active channel aggraded about 1–2 feet locally near the cities of Ferndale and Everson but was primarily stable between them. The active channel upstream of Nugent’s Corner generally incised. Total incision upstream of Nugent’s Corner to Glacier Creek generated 2.3 ± 1.7 million cubic yards of sediment from 2005/06 to 2013 and likely represented a significant source of coarse sediment to the lower mainstem river over that time. Long-term records of local channel-bed elevation, derived from U.S. Geological Survey streamgage data, show bed-elevation changes of about 1–3 feet. The river bed at most streamgages exhibits long-term trends, with relatively consistent rates of change on the order of 1 foot per decade that persist years to decades. Lagged correlations in bed-elevation trends at all seven streamgages in the North Fork Nooksack and mainstem Nooksack suggest that decadal periods of persistent aggradation and incision originate in the North Fork and translate downstream. The channel-change signal propagates downstream 0.5–2.5 miles per year, with the rate of propagation scaling closely with channel slope. The pattern of incision and aggradation in the North Fork correlates with regional climate, where persistent incision follows extended cold and wet periods, and persistent aggradation follows extended warm and dry periods. Climate-driven variation in coarse-sediment delivery, primarily from the North Fork Nooksack, then appears to be a strong control on long-term vertical channel adjustments at sites downstream. The downstream-translating climate signal generated in the North Fork would account for recently observed aggradation at Everson and Ferndale but not the observed incision in unconfined reaches upstream of Nugent’s Corner from 2005–06 to 2013. This mismatch indicates that understanding how changes in sediment-supply influence those unconfined reaches remains a key uncertainty for predicting future channel change. Continuous turbidity monitoring integrated with suspended sediment and limited bedload sampling were used to calculate annual sediment loads at five sites in the basin. The sediment load in the lower river at Ferndale ranged from 0.78 to 1.17 million tons per year and averaged 0.97 million tons per year for WYs 2012–17. Suspended sediment made up 93 percent of the load, and bedload made up 7 percent. Most of the fine sediment load of the lower river is supplied from headwaters of the North, Middle, and South Fork Nooksack basins, with relatively little net increase in fine sediment loads in the lower mainstem basin. The three forks supply approximately equal proportions of the lower-river fine sediment load. However, the glacially sourced North and Middle Fork Nooksack basins carry a notably sandier suspended-sediment load than the South Fork Nooksack. A comparison of monthly streamflow and precipitation trends since 1981 indicate statistically significant increases in total spring precipitation and the number of spring days with measurable precipitation in much of the basin, as well as increases in mean spring river stage near Ferndale. Since no trends in mean spring discharge are observed, the trends in river stage are attributed primarily to observed changes in bed elevation. Changes in bed elevation and precipitation may then both have plausibly impacted field drainage in the lower river below Ferndale.

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USGS2019

Downstream‐propagating channel responses to decadal‐scale climate variability in a glaciated river basin

Regional climate is an important control on the rate of coarse sediment mobilization and transport in alpine river systems. Changes in climate are then expected to cause a cascade of geomorphic responses, including adjustments in downstream channel morphology. However, the mechanics and sensitivity of channel response to short‐term climate variability remain poorly documented. In the Nooksack River, which drains a glaciated stratovolcano in Washington State, bed elevation changes were inferred from shifting stage–discharge relations at seven USGS stream gages. Decadal‐scale elevation trends at most sites can be explained as a downstream‐propagating channel response to regional climate variability, where periods of persistent warm, dry [cool, wet] conditions corresponded to periods of aggradation [incision]. The channel elevation response propagated downstream at a rate of one to four kilometers per year; propagation rate scaled closely with channel slope. Historical trends in glacier extent and flood intensity both show some potential to explain climate–sediment linkages, though assessing causation is complicated by the shared climate signal in both records. Results show the influence of the Pacific Decadal Oscillation, with relatively high coarse sediment yields prior to 1950 and since 1980, and notably lower sediment yields from 1950 to 1980. Measured sediment yields from nearby glaciated basins corroborate this history, suggesting a regional coherence to these climate–sediment linkages. These results document consistent relations between climate, sediment supply and downstream channel response at the basin‐scale, with channel responses propagating downstream over periods of decades with little apparent attenuation.

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USGS2019

Life-history model for sockeye salmon (Oncorhynchus nerka) at Lake Ozette, northwestern Washington—Users' guide

Salmon populations spawning in the Lake Ozette watershed of northwestern Washington were once sufficiently abundant to support traditional Tribal fisheries, and were later harvested by settlers. However, in 1974 and 1975, the sockeye salmon ( Oncorhynchus nerka ) harvest decreased to 0 from a high of more than 17,500 in 1949, thus stimulating research into the causes of decrease, which resulted in eventual listing of the population as threatened under the Endangered Species Act in 1999. The listing status was upheld in 2005 and 2014 following 5-year reviews. Meanwhile, research results were compiled in a limiting factors analysis (LFA) and a recovery plan was developed. Although there has been some improvement in sockeye abundance since listing, the numbers remain too low to allow harvest and it is not yet clear which of the many potential limiting factors are most consequential. As part of the LFA process, a population model was developed to determine values of life-history parameters that would enable the population to survive for 100 years. The model was based on the best available data, but data are limited for the Lake Ozette system. Results informed the qualitative assessment of the importance of limiting factors used to develop the recovery plan for Lake Ozette sockeye. The model was built in Microsoft Excel ® and is difficult to use. The purpose of the model described herein is to synthesize the results of the LFA in a form that can be manipulated by resource managers and the public to create scenarios, test hypotheses, and observe sensitivities of results to changes in parameters. The goal is to provide a tool that enables research, monitoring and management to be focused on the most impactful elements and processes, including identifying the information gaps that are most critical to fill.

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USGS2019

Carbon accumulation and vertical accretion in a restored vs. historic salt marsh in southern Puget Sound, Washington, United States

Few comparisons exist between vertical accretion (VA) and carbon accumulation rates (CARs), in restored vs. historic (i.e., reference) marshes. Here we compare these processes in a formerly diked, sparsely vegetated, restored salt marsh (Six Gill Slough, SG), whose surface is subsided relative to the tidal frame, to an adjacent, relatively pristine, historic salt marsh (Animal Slough, AS). Six sediment cores were collected at both AS and SG ~six years after restoration. Cores were analyzed for bulk density, % loss of ignition, % organic carbon, and 210Pb. We found that sharp changes in bulk density in surface layers of SG cores were highly reliable markers for the onset of restoration. The mean VA since restoration at SG (0.79 (sd=0.29) cm yr-1) was ~twice that of AS (0.41 (sd=0.16) cm yr-1). In comparison, the VA at AS over 50 years was 0.30 (sd=0.09) cm yr-1. VA consisted almost entirely of inorganic sediment at SG whereas at AS it was ~55%. Mean CARs at SG were somewhat greater than at AS, but the difference was not significant due to high variability (SG: 81 - 210 g C m-2 yr-1; AS: 115 - 168 g C m-2 yr-1). The mean CAR at AS over the past 50 years was 118 (sd=23) g C m-2 yr-1. This study demonstrates that a sparsely vegetated, restored salt marsh can quickly begin to accumulate carbon and that historic and restored marshes can have similar CARs despite highly divergent formation processes.

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USGS2019

Does perspective matter? A case study comparing Eulerian and Lagrangian estimates of common murre (Uria aalge) distributions

Studies estimating species' distributions require information about animal locations in space and time. Location data can be collected using surveys within a predetermined frame of reference (i.e., Eulerian sampling) or from animal‐borne tracking devices (i.e., Lagrangian sampling). Integration of observations obtained from Eulerian and Lagrangian perspectives can provide insights into animal movement and habitat use. However, contemporaneous data from both perspectives are rarely available, making examination of biases associated with each sampling approach difficult. We compared distributions of a mobile seabird observed concurrently from ship, aerial, and satellite tag surveys during May, June, and July 2012 in the northern California Current. We calculated utilization distributions to quantify and compare variability in common murre (Uria aalge) space use and examine how sampling perspective and platform influence observed patterns. Spatial distributions of murres were similar in May, regardless of sampling perspective. Greatest densities occurred in coastal waters off southern Washington and northern Oregon, near large murre colonies and the mouth of the Columbia River. Density distributions of murres estimated from ship and aerial surveys in June and July were similar to those observed in May, whereas distributions of satellite‐tagged murres in June and July indicated northward movement into British Columbia, Canada, resulting in different patterns observed from Eulerian and Lagrangian perspectives. These results suggest that the population of murres observed in the northern California Current during spring and summer includes relatively stationary individuals attending breeding colonies and nonstationary, vagile adults and subadults. Given the expected growth of telemetry studies and advances in survey technology (e.g., unmanned aerial systems), these results highlight the importance of considering methodological approaches, spatial extent, and synopticity of distribution data sets prior to integrating data from different sampling perspectives.

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USGS2019

Groundwater and surface-water data collection for Mason County, western Washington, 2016–18

Groundwater levels and surface water flow measurements were collected from August 2016 to September 2018 to provide the Mason Conservation District and other stakeholders with basic knowledge of existing water resources in Mason County, Washington. Additionally, the data were collected with the intent of contributing to informed decision making about groundwater use, management, and conservation throughout the county and for future inclusion in a groundwater model. Data were collected and compiled for 130 sites—110 wells and 20 miscellaneous surface-water discharge sites. In the spring of 2016, field reconnaissance was conducted to locate suitable locations for baseflow discharge measurements to be used for estimating groundwater contribution to surface flow. In the summer of 2016, a field inventory of wells was conducted to acquire locational data and to assess the suitability of the wells for inclusion in a monthly groundwater-level monitoring network. Groundwater levels were measured bimonthly in the 64 wells over 2 years. Streamflow measurements were conducted two times each summer during two summers for each of the 20 surface water sites.

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USGS2019

Ecological consequences of anomalies in atmospheric moisture and snowpack

Although increased frequency of extreme‐weather events is one of the most secure predictions associated with contemporary climate change, effects of such events on distribution and abundance of climate‐sensitive species remain poorly understood. Montane ecosystems may be especially sensitive to extreme weather because of complex abiotic and biotic interactions that propagate from climate‐driven reductions in snowpack. Snowpack not only protects subnivean biotas from extreme cold, but also influences forage availability through timing of melt‐off and water availability. We related relative abundances of an alpine mammal, the American pika ( Ochotona princeps ), to measures of weather and snowpack dynamics over an 8‐yr period that included before and after a year of record‐low snowpack in Washington, USA. We sought to (1) quantify any change in pika abundance associated with the snowpack anomaly and (2) identify aspects of weather and snowpack that influenced abundance of pikas. Pikas showed a 1‐yr lag response to the snowpack anomaly and exhibited marked declines in abundance at elevations below 1,400 m simultaneous with increased abundances at higher elevations. Atmospheric moisture, indexed by vapor pressure deficit (VPD), was especially important, evidenced by strong support for the top‐ranked model that included the interaction of VPD with snowpack duration. Notably, our novel application of VPD from gridded climate data for analyses of animal abundances shows strong potential for improving species distribution models because VPD represents an important aspect of weather that influences the physiology and habitat of biota. Pikas were apparently affected by cold stress without snowpack at mid elevations, whereas changes to forage associated with snowpack and VPD were influential at high and low elevations. Our results reveal context dependency in pika responses to weather and illustrate how snow drought can lead to rapid change in the abundance of subnivean animals.

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USGS2019

Simulating demography, genetics, and spatially explicit processes to inform reintroduction of a threatened char

The success of species reintroductions can depend on a combination of environmental, demographic, and genetic factors. Although the importance of these factors in the success of reintroductions is well‐accepted, they are typically evaluated independently, which can miss important interactions. For species that persist in metapopulations, movement through and interaction with the landscape is predicted to be a vital component of persistence. Simulation‐based approaches are a promising technique for evaluating the independent and combined effects of these factors on the outcome of various reintroduction and associated management actions. We report results from a simulation study of bull trout ( Salvelinus confluentus ) reintroduction to three watersheds of the Pend Oreille River system in northeastern Washington State, USA. We used an individual‐based, spatially explicit simulation model to evaluate how reintroduction strategies, life history variation, and riverscape structure (e.g., network topology) interact to influence the demographic and genetic characteristics of reintroduced bull trout populations in three watersheds. Simulation scenarios included a range of initial genetic stocks (informed by empirical bull trout genetic data), variation in migratory tendency and life history, and two landscape connectivity alternatives representing a connected network (isolation‐by‐distance) and a fragmented network (isolation‐by‐barrier, using the known existing barriers). A novel feature of these simulations was the ability to consider the interaction of both demographic and genetic (i.e., demogenetic) factors in riverscapes with implicit asymmetric movement probabilities across the barriers. We found that connectivity (presence or absence of barriers) had the largest effect on demographic and genetic outcomes over 200 yr, with a greater effect than both initial genetic diversity and life history variation. We also identified regions of the study system in which bull trout populations persisted across a wide range of demographic, life history, and environmental connectivity parameters. Finally, we found no evidence that initial neutral genetic diversity influenced genetic diversity and structure after 200 yr; instead, genetic drift due to stray rate and population isolation dominated and erased any initial differences in genetic diversity. Our results highlight the utility of spatially explicit demogenetic approaches in exploring and understanding population dynamics—and their implications for management strategies—in fresh waters.

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USGS2019

Contaminant baselines and sediment provenance along the Puget Sound Energy Transport Corridor, 2015

The transport of coal and oil can result in contaminated soil, water, and organisms from unintended releases. Trains carrying coal and crude oil regularly pass through Puget Sound, Washington, and an increase in the number of coal and oil trains is expected in the future. This study characterized levels of potentially toxic contaminants in sediment in September 2015: arsenic, metals, and polycyclic aromatic hydrocarbons (PAHs) at four sites with fine-grained sediment (Chuckanut Bay, Padilla Bay, Snohomish River Delta, Nisqually River Delta) adjacent to the Burlington Northern Santa Fe (BNSF) rail line in the Puget Sound region. Arsenic (As) and metals levels were compared to those measured at a fifth site, urban Saltwater State Park, which was expected to show contaminants associated with urbanization but not rail transport of coal and oil because it is not adjacent to the BNSF rail line. Knowledge about current properties of soil and sediment is essential for quantifying impacts of spills and other releases, and for setting remediation or restoration targets. For the sampling effort and timing of this study, all five sites had fine sediment contents of cadmium (Cd), mercury (Hg), lead (Pb), and zinc (Zn) below minimal effects levels. Pb and Zn appeared to be urban sourced. Median As, chromium (Cr), copper (Cu), and nickel (Ni) levels were in the range where adverse biological effects would possibly occur; however, Cr and Ni were geologically sourced and unlikely to be bioavailable to organisms. As, Cu, and antimony (Sb) levels were highly correlated, an association that is characteristic of legacy smelting operations; however, total sediment contents of these three elements, along with Hg and As/Sb ratios, were near natural levels and could indicate river-borne inputs. Median total PAH concentrations were highest at Snohomish River Delta, but were below minimal effects levels at all sites. Diagnostic PAH ratios were indicative of PAHs sourced from petroleum combustion and coal/biomass burning, rather than from spilled petroleum or coal. Rare earth element patterns were distinct among watersheds with Cascade volcanoes, granitic rocks, or non-volcanic sediments, making them promising sediment provenance indicators. Knowledge about sediment sources and contaminant distributions could provide unique insights about sediment-bound contaminant sourcing, delivery, and dispersal in nearshore regions.

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