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Source-linked reports with geographic coverage including United States.

At least 1,063 records · Page 59Linked to original sources

Evaluating the central–marginal hypothesis: Introgression and genetic variation at the trailing edge of Quercus bicolor

The central–marginal hypothesis (CMH) predicts reduced genetic diversity and increased differentiation in range-edge populations due to ecological marginality and limited gene flow. Deviations from this pattern, however, can result from historical demographic processes, variation in reproductive strategies or interspecific hybridization. The genus Quercus , known for hybridization and long-distance pollination, offers an excellent model to examine the spatial patterns of genetic diversity, structure and introgression across species distributions. Here, we investigate these dynamics in Quercus bicolor Willd., a widespread eastern North American oak. Using RADseq, we genotyped 142 individuals from 12 sites at the fragmented trailing range edge and nine sites from the range core. To detect introgression, we incorporated reference data from six sympatric white oak species. We reveal extensive introgression, particularly from Q. lyrata Walt., in nearly all southern edge populations, but none in core populations despite sympatry with closely related congeners. Southern populations also showed increased genetic structure and differentiation, but not reduced diversity or increased inbreeding, even when only examining non-admixed individuals. Regression analyses reveal relationships between introgressed ancestry and heterozygosity, inbreeding and differentiation, indicating that introgression may buffer range-edge populations against genetic erosion by introducing novel alleles. Hindcast, current and forecast ecological niche models demonstrate temporally changing degrees of overlap between the geographic range of Q. lyrata and Q. bicolor and suggest higher hybridization potential in the future. These findings offer mixed support for the CMH while underscoring the evolutionary relevance of introgression in shaping genetic landscapes at range margins with significant implications for conservation.

Molecular Ecology

Improved ground-truthing and benthic habitat characterization with machine learning models and 3D photogrammetry

Benthic mapping relies on a range of methods to ground truth remotely sensed data to map physical and biotic features. Traditional methods are labor-intensive and time-consuming with limited scalability. Autonomous underwater vehicles (AUVs) and remote operated vehicles (ROVs) can collect high volumes of quality data but require automated processing routines and pose other logistic challenges. This paper explores the automated use of multiple machine learning (ML) models to detect and delineate benthic habitat components from structure-from-motion (SfM) orthomosaics. Overlapping AUV photos were processed into high-resolution, seamless orthomosaics for a portion of the Lake Michigan lakebed. ML models were trained to delineate rocks and live mussels and subsequently applied to the SfM orthomosaics. Results demonstrate that a robust pipeline with SfM and ML models is an effective approach to efficiently, accurately, and comprehensively map benthic habitats.

Lake Michigan

An evaluation of the effects of different deicing salt application rates on three watersheds in Essex County, New York

The U.S. Geological Survey, in cooperation with the New York State Department of Transportation, evaluated the effects of different deicing salt application rates on surface water, groundwater, and highway runoff quality near State highways in northern New York. Three reaches of State highways were tested with different deicing treatments between October 2019 and November 2022: a salt-sand mixture (Treatment A), a salt mixture applied at a lower rate (Treatment B), and a control mixture consistent with typical deicing salt amounts and application rates. Data on pavement conditions and the quality of surface water, highway runoff, and groundwater were collected. Surface electromagnetic data were also collected. Surface-water and groundwater quality downgradient from the State highways were compared with water quality at upgradient locations. The percentage of snow or ice coverage was used to evaluate the effectiveness of the salt applications. This report provides an overview of the transport of deicing salt. The Treatment B watershed had deicing mixture applied more frequently than other highway reaches, which caused it to have the highest annual total chloride application. Despite differences in chloride application, flow-weighted mean chloride concentrations in highway runoff were comparable across treatments. Chloride concentrations were elevated in surface water and groundwater downgradient from highways relative to chloride concentrations upgradient from highways. A chloride mass balance, calculated for one treatment watershed, indicated that groundwater affected by legacy deicing practices may be contributing additional chloride to surface water. Spatial patterns from electromagnetic surveys show a shallow saline plume alongside the highway in that area. Differences in winter severity and pavement-surface conditions drove deicing salt applications in the treatment areas. This study found that several factors affect chloride loads in the watersheds, including variable winter conditions, adaptive snow and ice management, legacy management practices, and area-specific aquifer and groundwater conditions.

New York

Hosts, pathogens and hot ponds: Thermal mean and variability contribute to spatial patterns of chytrid infection

Temperature is a primary driver of heterogeneity in host–pathogen dynamics and understanding how patch-scale temperature affects landscape-scale patterns of pathogen infection is key to effective monitoring and management. In field studies, both temperature variability and mean temperature are often related to infection of ectothermic animals by fungal pathogens, and although these factors vary spatiotemporally, their contributions to infection outcomes are rarely decomposed into spatial and temporal components. We studied how patch-scale thermal conditions (mean and variability) affect infection of eastern newts Notophthalmus viridescens by Batrachochytrium dendrobatidis ( Bd ), with a special focus on disentangling spatial versus temporal contributions of thermal conditions to infection outcomes. We measured in situtemperature and Bd infection across 20 ponds in two years in southeastern Wisconsin, USA to 1) understand thermal mediation of infection and 2) quantify whether seasonal and/or among-site variation in thermal conditions drive heterogeneity in host–pathogen interactions. In our system, thermal mean and variability covaried tightly, necessitating the creation of a single index to capture both components. We found that 1) this index of thermal mean and variability was strongly and nonlinearly related to Bd infection and 2) differences among patches in thermal conditions drove this relationship, highlighting that variation in patch-level conditions can drive heterogenous host–pathogen outcomes across landscapes. Our research collectively reveals insights about the importance of local, patch-level conditions for mediating disease risk at broader scales.

Wisconsin

Late Quaternary pollen record from southwest Seward Peninsula, western Alaska, and the vegetation history of central Beringia

Pollen analysis of samples from a coastal exposure near Teller, southwestern Seward Peninsula, Alaska, provides a record of vegetation and climate spanning the Last Glacial Maximum (LGM) through the Holocene. The site is near the center of the former Bering Land Bridge (BLB). The oldest pollen-bearing sediment unit is a loess deposit of LGM age, with pollen assemblages that closely resemble LGM assemblages from other key sites in central Beringia spanning 16° of latitude. These fossil assemblages represent vegetation composed primarily of grasses, sedges, Artemisia , willows, and forbs and are interpreted to represent steppe–tundra, associated with dry climates and summer temperatures cooler than at present. LGM mosses did not accumulate insulating layers of peat; the summer active soil layer was deeper than at present. Permafrost with ice wedges and loess deposition were widespread. A regional transition from steppe–tundra vegetation to a dwarf shrub–sedge–moss mesic-to-wetland vegetation began in central Beringia with the onset of Bølling–Allerød (B-A) warming at 14,700 cal yr BP. Warming events of the B-A and early Holocene resulted in widespread development of thermokarst terrain on the BLB and on ice-rich terrain in Western Alaska. Mesic climates and vegetation developed on the BLB during the marine transgression and because of B-A and early Holocene warming. Early Holocene warming allowed some boreal forest species such as alders to begin colonizing Western Alaska from the interior.

Alaska

How high? Identifying elevation thresholds to guide coastal marsh restoration

Introduction Coastal marshes are highly valuable ecosystems facing threats from rising sea levels and intensifying storm events. To elevate marsh surfaces and prevent loss of ecosystem services, the beneficial use of dredged material (BUDM) is increasingly being implemented across the United States. Objectives The objective of this study was to aid decision-makers and restoration practitioners by identifying elevation thresholds that control the optimal function of Spartina patens -dominated marshes along the Texas Coast. Methods This study was conducted in the coastal marshes of the J.D. Murphree Wildlife Management Area (Texas). We collected elevation and vegetation cover data along ecological transition zones in marshes nourished with BUDM to identify elevation thresholds that define zones of optimal plant survivorship and growth. Results We identified lower (−0.05 m mean high water, MHW) and upper (0.26 m MHW) elevation thresholds that defined transitions to open water and unvegetated bare ground, respectively. Elevation targets ( T ) and elevation target zones, which defined areas with the greatest vegetation cover, were determined for S. patens ( T : 0.11 m, target zone: −0.06 to 0.26 m MHW), S. alterniflora ( T : 0.00 m, target zone: −0.12 to 0.10 m MHW), and Distichlis spicata ( T : 0.17 m, target zone: 0.07–0.25 m MHW). Conclusions Our analyses provide species-specific elevation targets for coastal marsh restoration through BUDM, which can improve restoration outcomes for coastal wetlands.

Texas

Estimating flood discharges at selected annual exceedance probabilities for unregulated, rural streams in Vermont, 2023

This report provides estimates of flood discharge at selected annual exceedance probabilities (AEPs) for streamgages in and adjacent to Vermont and equations for estimating flood discharges at AEPs of 50-, 20-, 10-, 4-, 2-, 1-, 0.5-, and 0.2-percent (recurrence intervals of 2-, 5-, 10-, 25-, 50-, 100-, and 500-years, respectively) for ungaged, unregulated, rural streams in Vermont with drainage areas between 0.47 and 851 square miles. The equations were developed using generalized least-squares regression and flood-frequency and drainage-basin characteristics from 156 streamgages. Flood-frequency analyses were completed using data through the 2023 water year. The drainage-basin characteristics used as explanatory variables in the regression equations are drainage area, percentage of wetland area, and basin-wide mean of the average annual precipitation. The average standard errors of prediction used to estimate flood discharges at the 50-, 20-, 10-, 4-, 2-, 1-, 0.5-, and 0.2-percent AEP with these equations are 34.9, 37.1, 38.2, 41.6, 43.8, 46.0, 49.1, and 53.2 percent, respectively. Flood discharges at selected AEPs for streamgages were computed using the Expected Moments Algorithm. Techniques used to adjust an AEP discharge computed from a streamgage record with results from the regression equations and to estimate flood discharge at a selected AEP for an ungaged site upstream or downstream from a streamgage using a drainage-area adjustment are both described. The final regression equations and the flood-discharge frequency data used in this study will be available in StreamStats. StreamStats is an internet-based application that provides automated regression-equation solutions for user-selected sites on streams.

Vermont

Topographic, climatic, and age controls on the reworking of volcanic debris avalanche deposits

Volcanic debris avalanches have deposited as much as 1000 km 3 of largely unconsolidated material on landscapes and remodeled existing drainage networks. The landscape disturbances created by these events pose severe, cascading downstream sedimentation hazards that can require long-term societal management, as demonstrated by decades of observations and ongoing interventions after the deposition of the 1980 debris avalanche of Mount St. Helens (United States). There, post-emplacement sediment yields caused by deposit erosion remain several times above estimated background yield and lakes impounded by the deposit still pose threats of downstream flooding. Despite the length and quality of measurements of the geomorphic evolution and consequent sediment release at Mount St. Helens, the long-term trajectory of drainage network evolution across, and the associated sediment release from, large volcanic debris avalanches remains uncertain. Observations and modeling at Mount St. Helens, however, indicate channel instability can persist many decades and may persist for centuries to millennia. We examined potential influences on the erosion and preservation of volcanic debris avalanche deposits (VDADs) by mapping valley networks developed on 89 VDADs selected from volcanic arcs across the world and spanning a variety of topographic settings and climate regimes. Using the best available topographic data (1 m lidar to 30 m radar-derived data depending on location) and aerial imagery, we estimated the areas of deposits that have been reworked relative to initial deposit footprints as a proxy for post-emplacement erosion. We found that a primary influence on reworking is the topographic confinement of the VDAD: confined, valley-filling deposits are systematically more reworked than unconfined deposits. There is no apparent relationship between deposit age and reworking for valley-filling deposits, indicating that drainage networks on deposits in confined topographic settings like at Mount St. Helens reform rapidly after emplacement. In contrast, our data indicate that the reworking of unconfined deposits has a monotonic positive relationship with age. This observation agrees with a conceptual model of channel formation at Mount Taranaki (New Zealand), which posits that an unconfined VDAD created a topographic high that initially (e.g., 2–8 ky for the Pungarehu formation at Taranaki) diverted erosion to the deposit margins. We found only a weak to moderate relationship between reworking and modern precipitation regimes, which may reflect differences between modern and paleo-precipitation conditions at many of our study sites. We also found no correlation between the size (surface area or volume) of deposits and the degree of reworking. The work presented here implies that downstream cascading sediment hazards from landscape-resetting processes like VDADs (such as thick, extensive pyroclastic flow deposits) depend on the relief and organization of the surrounding landscape.

Washington

Groundwater structures fish growth and production across a riverscape

Landscapes are composed of habitat patches and conditions that vary across space and time. While habitat variability and complexity can support important ecological processes and ecosystem services, the dynamic nature of habitats can also constrain organismal growth and production as optimal conditions are fleeting. In riverine ecosystems, groundwater discharge to streams stabilises water temperature and flow regimes, thus mediating how habitat complexity is expressed. Yet, how stable habitats structure growth and production within the broader landscape matrix is not well understood. In this study, we explored the effects of groundwater on spatiotemporal variation in growth and production for juvenile Yellowstone cutthroat trout ( Oncorhynchus virginalis bouvieri ) across the upper Snake River catchment, Wyoming, USA. We combined machine learning techniques and remotely sensed landscape data to estimate groundwater availability across the river network, which we linked to stream temperature regimes and conspecific density. We then used Bayesian hierarchical models to quantify the effects of temperature, density and groundwater on spatiotemporal variation in fish growth and production in 52 focal reaches. Finally, we predicted body size trajectories and trends in total production continuously over both space and time to understand the effect of groundwater at the riverscape scale. Groundwater discharged to streams where topography changes abruptly in valley-bottom areas underlain by coarse glacial deposits. Groundwater stabilised temperature regimes and was associated with high trout densities. Temperature and density, in turn, interacted to influence growth rates: growth increased strongly with temperature, but this effect was reduced when density was high. Accordingly, variation in groundwater availability among stream reaches diversified growth and production regimes. In reaches with low groundwater availability, growth and production declined over time from summer maxima. In contrast, in reaches with high groundwater availability, temporal trends in growth and production were hump-shaped—peaking in autumn—and mean production was greater. At the riverscape scale, temporal asynchrony in growth rates generated convergent spatial variation in growth capacity, but—when combined with density—led to the formation of distinct hotspots of production. Our results demonstrate how groundwater, an important driver of aquatic ecosystem heterogeneity, structures trout growth and production across space and time. Importantly, rare, but stable habitats may disproportionately affect ecological processes and serve as key sources of population diversity at larger spatial scales.

Wyoming

Twenty years (2000-2020) of butterfly monitoring data across the contiguous United States

We present the most comprehensive, integrated, butterfly monitoring dataset ever assembled for the United States. It contains over 1.2 million count records, from 65,000 surveys, representing over 12.6 million individual butterflies. To compile this dataset, we integrated data and harmonized taxonomy across 19 butterfly monitoring programs in the United States – one national, 13 statewide, and 5 local (e.g. individual county or National Park) in scale. In addition to the data, we also provide the taxonomic dictionary used to crosswalk butterfly taxonomy across programs, and the code used to assemble the integrated dataset. The publication of this dataset will inspire new analyses of butterfly population trends and drivers that help to identify solutions to the biodiversity crisis.

contiguous United States

Success of restoration strategies in preventing extirpation of 2 critically endangered coral species

An unprecedented marine heatwave in 2023 caused widespread coral bleaching and mortality throughout the Caribbean. In the Florida Keys (USA), 2 foundation species, elkhorn coral ( Acropora palmata ) and staghorn coral ( Acropora cervicornis ), were severely affected. These species have been the primary focus of reef restoration in Florida for decades. Substantial losses of these species occurred in outplanted populations, in ocean-based nurseries, and among remnant wild colonies, leading to uncertainty over their future in the Florida Keys, given recent observed trends in climate conditions. However, the past 2 decades of restoration activity created a community of experts, a network of ocean-based and land-based coral-rearing infrastructure, and 2 independent land-based coral gene banks that prevented regional extirpation and preserved much of the genetic richness of these critically endangered coral species. Without the past decades of effort and the emergency response associated with the 2023 bleaching event, Florida acroporids would largely have been lost. This outcome afforded by the restoration network in Florida demonstrates the value of proactively establishing resources prior to major disturbances. We identified several critical strategies that, in the context of existing climate change, are preventing the extirpation of coral species in Florida, including extending collaborative restoration efforts to solidify a network of trained experts; establishing trust-focused relationships among management agencies and restoration groups; testing direct interventions to reduce light and temperature stress early during thermal anomalies; developing redundant ocean-based and land-based nurseries; and establishing living coral gene banks prior to major threats to prevent the extirpation of coral species.

Florida

The rise of U.S. photovoltaics: An exploration of land use density trends in large-scale solar facility attributes, 2012-2021

An energy transition is underway in the United States; renewable energy generation is now on par with coal and nuclear generation. The number of large-scale solar photovoltaic facilities increased approximately tenfold between 2012 and 2021, with an associated 25-fold increase in cumulative installed capacity. With ambitious decarbonization and renewable energy deployment goals at both the federal and state levels, deployments of large-scale solar photovoltaic facilities will continue apace. This growth is likely to be complex with ripples of impacts felt throughout different aspects of society, and thus accurate solar land use metrics allowing more accurate predictions are of value to policymakers, planners, and other stakeholders in the future photovoltaic build-out. In this paper, we leverage data from the newly released US Large-Scale Solar Photovoltaic Database to examine recent trends in large-scale solar photovoltaic land use. We analyze the relationships between solar array capacity density (W/acre) and a range of facility attributes to better understand the future land requirements of solar capacity expansion over the coming years. Installed capacity was the single strongest determinant of solar array area. However, we found substantial variation in capacity density across facility attributes, including mount type, latitude, urbanicity, time, and prior land use.

conterminous United States

Water residence time and water depth influence on nutrient conditions, eutrophication endpoints and habitat quality in backwater lakes of a large floodplain river

Many eutrophication studies focus on the external supply of critical nutrients like nitrogen and phosphorus, but hydrology and geomorphology can enhance or dampen the effects of excessive nutrient supply. We studied six backwater lakes in the Upper Mississippi River that varied in water residence time and water depth. Eutrophication in these systems is responsible for negative impacts such as cyanobacterial blooms and toxicity, and floating plant and algal mats that disrupt recreational water uses. Increasing backwater residence time was associated with more nitrate removal and a greater likelihood of nitrogen limitation, as well as greater accumulations of duckweed. Backwaters with greater depth and lower nitrogen concentration had less likelihood of filamentous algal accumulations. The median water residence time of backwaters with low duckweed (11.7 days) and no filamentous algae (16.9 days) approached the 12-day target to maintain overwintering conditions in backwaters for fisheries survival, supporting that water residence times in this range would likely improve both winter and summer water quality. Mean depth in backwaters with low duckweed and no filamentous algae was ~1.3 m, while shallower backwaters were more likely to produce duckweed and filamentous algae mats. This indicates that deeper backwaters might reduce the likelihood of eutrophication impacts. Natural resource management at the local level may not always be able to answer global and regional threats, but habitat restoration of hydrology and geomorphology can possibly alleviate or reduce large-scale threats at the local level.

Minnesota, Wisconsin

Divergent responses of seed banks and aboveground vegetation to drought and deluge in grasslands across an elevational gradient

Increased variability in precipitation associated with climate change creates extreme conditions of drought and deluge that can have profound effects on the abundance and composition of plant communities. Responses to these extremes likely vary across climatic gradients and depend on local plant community composition, which includes the emergent, aboveground vegetation as well as belowground seed banks. Because seed banks can both buffer the effects of environmental change and influence the future trajectories of communities, it is critical to understand seed bank responses to precipitation extremes in relation to the aboveground vegetation and how patterns vary across environmental gradients. Here we quantified the responses of aboveground and seed bank communities at five perennial grass-dominated sites across an elevational gradient to 6 years of extreme drought and deluge, by implementing experimental water exclusion and water addition treatments. Responses were stronger for drought than for deluge. Drought decreased abundance aboveground, while seed bank abundances were generally unaffected. Similarly, drought decreased richness and diversity of aboveground vegetation at intermediate elevations, without concurrent changes in seed banks. Surprisingly, the lowest and middle elevation sites showed stronger shifts in functional composition and dissimilarity in response to treatments, despite the expectation of greater buffering in seed banks in more arid environments. The relatively attenuated responses of seed bank communities to drought and deluge suggest potential for resistance and recovery, though species and functional composition may show greater responses to change particularly in more arid, lower elevation sites.

Arizona

Land cover, elevation, and precipitation predict distribution and hotspots of three bird species of concern in boreal Alaska

The boreal forest biome is an important breeding area for migratory birds and is undergoing rapid changes, including drying of wetlands, changes to vegetation composition, and human development. Many boreal bird populations are declining, but information is often lacking on how these species associate with habitat characteristics and thus how they may respond to changing conditions. We used a large point-count dataset to describe habitat associations and hotspots for three boreal species of concern in Alaska, USA: Tringa flavipes (Lesser Yellowlegs), Contopus cooperi (Olive-sided Flycatcher), and Euphagus carolinus (Rusty Blackbird). We used an N-mixture model to evaluate covariates of abundance and two components of detection (availability and perceptibility). We then used the estimated relationships with covariates to predict density of each species across the Northwestern Interior Forest (Bird Conservation Region 4) in Alaska, including identifying hotspots where density was predicted to be in the top 10% of all locations. T. flavipes and E. carolinus were associated with wetlands and mean values of June precipitation; T. flavipes were also associated with low elevation and recent fire; and C. cooperi was associated with needleleaf forest and moderate elevation. Hotspots for T. flavipes and E. carolinus usually overlapped, while hotspots for C. cooperi almost never overlapped with those of the other two species. Following ground-truthing, these predicted distributions could be used to indicate areas of high importance for species of conservation concern and thus inform management decisions and mitigation measures. Our results could also help identify areas that are likely to be important for these species in the future, given the rapid changes now occurring across the boreal biome in response to climate warming and drying.

Alaska

Long‐period ground motions from dynamic rupture simulations of large earthquakes on the creeping Hayward–Calaveras–Rodgers Creek fault system

he Hayward, Calaveras, and Rodgers Creek faults in the San Francisco Bay region of California have a high probability of producing a large earthquake in the next decades. Although these faults creep, the creep is insufficient to keep up with their relatively rapid slip rates on their deepest sections, so they have been storing tectonic strain since their last large earthquakes, with the Hayward’s and Rodgers Creek’s more than 150 yr ago. We do not know what the next large Hayward–Calaveras–Rodgers Creek earthquakes will look like or how strongly they will shake the San Francisco Bay region. Harris et al. (2021) used the 3D dynamic (spontaneous) rupture method to simulate large earthquakes on these creeping faults. In this article, we examine the resulting simulated long‐period ( T > 1 s) ground shaking from 0 to 50 km distance, for earthquakes nucleating on the Hayward fault and earthquakes nucleating on the Rodgers Creek fault. We compare these simulated long‐period ground motions with the Boore et al. (2014) well‐established empirically based ground‐motion model suitable for the slowest material velocity in our 3D velocity structure. We find that the simulated long‐period ground motions from the creeping‐fault earthquake scenarios produce a reasonable agreement with the empirical expectations if frictional cohesion is included only where it is appropriate.

California

Observations of tear-drinking by lepidopterans on moose ( Alces alces americana ) in northeastern North America

Lepidoptera have long been known to feed on the tears of vertebrates as a presumed source of minerals or nutrients. While this unusual behavior has been observed in a variety of species, only a single previous record has been documented outside of the tropics. Here, we present the first documentation of moths visiting the eyes of a bull moose ( Alces americanus americanus ), captured via trail camera in Green Mountain National Forest, Vermont, United States. We discuss the biogeography of this behavior, how it may differ between tropical and temperate climates, and its potential impact on moose health.

Vermont