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Research about Susquehanna River

Source-linked reports with geographic coverage including Susquehanna River.

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A fishery after the decline: The Susquehanna River Smallmouth Bass story

The Smallmouth Bass Micropterus dolomieu fishery in the Susquehanna River basin, Pennsylvania, is one of the most socioeconomically important fisheries in the region and has recently undergone considerable changes. These changes started in 2005, when disease was documented in young-of-the-year (age-0) Smallmouth Bass. Shortly thereafter, declines in abundance of both juveniles and adults were observed. These declines in abundance coincided with disease infections in age-0, intersex in adults, and concerns regarding contaminant exposure. Natural mortality rates, particularly for age-0, increased during this period (2005–2011), and there were concerns for the overall health of this world-class fishery. However, in recent years (2012–2017), there have been decreases in both mortality rates and external observations of disease and increases in abundance across multiple size-classes. Recent changes are encouraging for the future of the Smallmouth Bass fishery in the Susquehanna River. Yet, in light of the ever changing environmental, social, and anthropogenic influences on aquatic ecosystems, there remain concerns for Smallmouth Bass health and management. Because of this, ongoing research efforts are needed to monitor population and health changes and to conduct integrative research that considers complex relationships between organisms and their environments.

Pennsylvania

Hydrogeology of the Susquehanna River valley-fill aquifer system in the Endicott-Vestal area of southwestern Broome County, New York

The village of Endicott, New York, and the adjacent town of Vestal have historically used groundwater from the Susquehanna River valley-fill aquifer system for municipal water supply, but parts of some aquifers in this urban area suffer from legacy contamination from varied sources. Endicott would like to identify sites distant from known contamination where productive aquifers could supply municipal wells with water that would not require intensive treatment. The distribution or geometry of aquifers within the Susquehanna River valley fill in western Endicott and northwestern Vestal are delineated in this report largely on the basis of abundant borehole data that have been compiled in a table of well records. Early in deglaciation, meltwater deposited sand and gravel in channels within or beneath the decaying ice and as narrow terraces along the valley walls. These ice-contact deposits vary widely over short distances from clean (free of silt) and highly permeable to clogged with silt and poorly permeable, but collectively constitute the principal aquifers in Endicott and Vestal. Some ice-contact deposits form a buried ridge, deposited in a meltwater channel within the ice sheet, that approximately underlies the Susquehanna River and (or) its north bank from Endwell westward to Nanticoke Creek and has been tapped by several municipal and industrial wells. Similar but thinner ice-contact deposits discontinuously underlie the valley floor to the south in Vestal, and a smaller buried ridge of ice-contact deposits is likely beneath or west of Nanticoke Creek south of West Corners. As deglaciation continued, a large lake developed; thick deposits of gray silt with red clay layers are continuous north of the Susquehanna River from Endwell to West Endicott, and similar deposits are present discontinuously elsewhere. Late in deglaciation, meltwater deposited highly permeable pebbly sand atop the valley fill, generally atop lacustrine silt. The saturated thickness of this surficial sand is seldom great enough to support large-capacity wells, but where it directly overlies ice-contact deposits it facilitates recharge from precipitation and infiltration of river water to the deeper aquifers. Three localities in Endicott were identified where thick ice-contact deposits capable of supporting municipal supply wells are documented by test wells or extrapolated to be present from nearby data and depositional history. Chemical analyses of water samples disclosed no contaminants in these localities when sampled, but the presence of contaminants or natural high iron a few thousand feet away from each locality is documented.

New York

Capturing interactions between nitrogen and hydrological cycles under historical climate and land use: Susquehanna watershed analysis with the GFDL land model LM3-TAN

We developed a process model LM3-TAN to assess the combined effects of direct human influences and climate change on terrestrial and aquatic nitrogen (TAN) cycling. The model was developed by expanding NOAA's Geophysical Fluid Dynamics Laboratory land model LM3V-N of coupled terrestrial carbon and nitrogen (C-N) cycling and including new N cycling processes and inputs such as a soil denitrification, point N sources to streams (i.e., sewage), and stream transport and microbial processes. Because the model integrates ecological, hydrological, and biogeochemical processes, it captures key controls of the transport and fate of N in the vegetation–soil–river system in a comprehensive and consistent framework which is responsive to climatic variations and land-use changes. We applied the model at 1/8° resolution for a study of the Susquehanna River Basin. We simulated with LM3-TAN stream dissolved organic-N, ammonium-N, and nitrate-N loads throughout the river network, and we evaluated the modeled loads for 1986–2005 using data from 16 monitoring stations as well as a reported budget for the entire basin. By accounting for interannual hydrologic variability, the model was able to capture interannual variations of stream N loadings. While the model was calibrated with the stream N loads only at the last downstream Susquehanna River Basin Commission station Marietta (40°02' N, 76°32' W), it captured the N loads well at multiple locations within the basin with different climate regimes, land-use types, and associated N sources and transformations in the sub-basins. Furthermore, the calculated and previously reported N budgets agreed well at the level of the whole Susquehanna watershed. Here we illustrate how point and non-point N sources contributing to the various ecosystems are stored, lost, and exported via the river. Local analysis of six sub-basins showed combined effects of land use and climate on soil denitrification rates, with the highest rates in the Lower Susquehanna Sub-Basin (extensive agriculture; Atlantic coastal climate) and the lowest rates in the West Branch Susquehanna Sub-Basin (mostly forest; Great Lakes and Midwest climate). In the re-growing secondary forests, most of the N from non-point sources was stored in the vegetation and soil, but in the agricultural lands most N inputs were removed by soil denitrification, indicating that anthropogenic N applications could drive substantial increase of N 2 O emission, an intermediate of the denitrification process.

Pennsylvania

Flood-inundation maps for the Susquehanna River near Harrisburg, Pennsylvania, 2013

A series of 28 digital flood-inundation maps was developed for an approximate 25-mile reach of the Susquehanna River in the vicinity of Harrisburg, Pennsylvania. The study was selected by the U.S. Army Corps of Engineers (USACE) national Silver Jackets program, which supports interagency teams at the state level to coordinate and collaborate on flood-risk management. This study to produce flood-inundation maps was the result of a collaborative effort between the USACE, National Weather Service (NWS), Susquehanna River Basin Commission (SRBC), The Harrisburg Authority, and the U.S. Geological Survey (USGS). These maps are accessible through Web-mapping applications associated with the NWS, SRBC, and USGS. The maps can be used in conjunction with the real-time stage data from the USGS streamgage 01570500, Susquehanna River at Harrisburg, Pa., and NWS flood-stage forecasts to help guide the general public in taking individual safety precautions and will provide local municipal officials with a tool to efficiently manage emergency flood operations and flood mitigation efforts. The maps were developed using the USACE HEC–RAS and HEC–GeoRAS programs to compute water-surface profiles and to delineate estimated flood-inundation areas for selected stream stages. The maps show estimated flood-inundation areas overlaid on high-resolution, georeferenced, aerial photographs of the study area for stream stages at 1-foot intervals between 11 feet and 37 feet (which include NWS flood categories Action, Flood, Moderate, and Major) and the June 24, 1972, peak-of-record flood event at a stage of 33.27 feet at the Susquehanna River at Harrisburg, Pa., streamgage.

Pennsylvania

Water-quality monitoring in response to young-of-the-year smallmouth bass (Micropterus dolomieu) mortality in the Susquehanna River and major tributaries, Pennsylvania: 2008

Mortalities of young-of-the-year (YOY) smallmouth bass ( Micropterus dolomieu ) recently have occurred in the Susquehanna River due to Flavobacterium columnare , a bacterium that typically infects stressed fish. Stress factors include but are not limited to elevated water temperature and low dissolved oxygen during times critical for survival and development of smallmouth bass (May 1 through July 31). The infections were first discovered in the Susquehanna River and major tributaries in the summer months of 2005 but also were prevalent in 2007. The U.S. Geological Survey, Pennsylvania Fish and Boat Commission, Pennsylvania Department of Environmental Protection, and PPL Corporation worked together to monitor dissolved oxygen, water temperature, pH, and specific conductance on a continuous basis at seven locations from May through mid October 2008. In addition, nutrient concentrations, which may affect dissolved-oxygen concentrations, were measured once in water and streambed sediment at 25 locations. Data from water-quality meters (sondes) deployed as pairs showed daily minimum dissolved-oxygen concentration at YOY smallmouth-bass microhabitats in the Susquehanna River at Clemson Island and the Juniata River at Howe Township Park were significantly lower (p-value < 0.0001) than nearby main-channel habitats. The average daily minimum dissolved-oxygen concentration during the critical period (May 1–July 31) was 1.1 mg/L lower in the Susquehanna River microhabitat and 0.3 mg/L lower in the Juniata River. Daily minimum dissolved-oxygen concentrations were lower than the applicable national criterion (5.0 mg/L) in microhabitat in the Susquehanna River at Clemson Island on 31 days (of 92 days in the critical period) compared to no days in the corresponding main-channel habitat. In the Juniata River, daily minimum dissolved-oxygen concentration in the microhabitat was lower than 5.0 mg/L on 20 days compared to only 5 days in the main-channel habitat. The maximum time periods that dissolved oxygen was less than 5.0 mg/L in microhabitats of the Susquehanna and Juniata Rivers were 8.5 and 5.5 hours, respectively. Dissolved-oxygen concentrations lower than the national criterion generally occurred during nighttime and early-morning hours between midnight and 0800. The lowest instantaneous dissolved-oxygen concentrations measured in microhabitats during the critical period were 3.3 mg/L for the Susquehanna River at Clemson Island (June 11, 2008) and 4.1 mg/L for the Juniata River at Howe Township Park (July 22, 2008). Comparison of 2008 data to available continuous-monitoring data from 1974 to 1979 in the Susquehanna River at Harrisburg, Pa., indicates the critical period of 2008 had an average daily mean dissolved-oxygen concentration that was 1.1 mg/L lower (p-value < 0.0001) than in the 1970s and an average daily mean water temperature that was 0.8 °C warmer (p-value = 0.0056). Streamflow was not significantly different (p-value = 0.0952) between the two time periods indicating that it is not a likely explanation for the differences in water quality. During the critical period in 2008, dissolved-oxygen concentrations were lower in the Susquehanna River at Harrisburg, Pa., than in the Delaware River at Trenton, N.J., or Allegheny River at Acmetonia near Pittsburgh, Pa. Daily minimum dissolved-oxygen concentrations were below the national criterion of 5.0 mg/L on 6 days during the critical period in the Susquehanna River at Harrisburg compared to no days in the Delaware River at Trenton and the Allegheny River at Acmetonia. Average daily mean water temperature in the Susquehanna River at Harrisburg was 1.8 °C warmer than in the Delaware River at Trenton and 3.4 °C warmer than in the Allegheny River at Acmetonia. These results indicate that any stress induced by dissolved oxygen or other environmental conditions is likely to be magnified by elevated temperature in the Susquehanna River at Harrisburg compared to the Delaware River at Trenton or the Allegheny River at Acmetonia.

Pennsylvania

Changes in bottom-surface elevations in three reservoirs on the lower Susquehanna River, Pennsylvania and Maryland, following the January 1996 flood — Implications for nutrient and sediment loads to Chesapeake Bay

The Susquehanna River drains about 27,510 square miles in New York, Pennsylvania, and Maryland, contributes nearly 50 percent of the freshwater discharge to the Chesapeake Bay, and contributes nearly 66 percent of the annual nitrogen load, 40 percent of the phosphorus load, and 25 percent of the suspended-sediment load from non-tidal parts of the Bay during a year of average streamflow. A reservoir system formed by three hydroelectric dams on the lower Susquehanna River is currently trapping a major part of the phosphorus and suspended-sediment loads from the basin and, to a lesser extent, the nitrogen loads. In the summer of 1996, the U. S. Geological Survey collected bathymetric data along 64 cross sections and 40 bottom-sediment samples along 14 selected cross sections in the lower Susquehanna River reservoir system to determine the remaining sediment-storage capacity, refine the current estimate of when the system may reach sediment-storage capacity, document changes in the reservoir system after the January 1996 flood, and determine the remaining nutrient mass in Conowingo Reservoir. Results from the 1996 survey indicate an estimated total of 14,800,000 tons of sediment were scoured from the reservoir system from 1993 (date of previous bathymetric survey) through 1996. This includes the net sediment change of 4,700,000 tons based on volume change in the reservoir system computed from the 1993 and 1996 surveys, the 6,900,000 tons of sediment deposited from 1993 through 1996, and the 3,200,000 tons of sediment transported into the reservoir system during the January 1996 flood. The January 1996 flood, which exceeded a 100-year recurrence interval, scoured about the same amount of sediment that normally would be deposited in the reservoir system during a 4- to 6-year period. Concentrations of total nitrogen in bottom sediments in the Conowingo Reservoir ranged from 1,500 to 6,900 mg/kg (milligrams per kilogram); 75 percent of the concentrations were between 3,000 and 5,000 mg/kg. About 96 percent of the concentrations of total nitrogen consisted of organic nitrogen. Concentrations of total phosphorus in bottom sediments ranged from 286 to 1,390 mg/kg. About 84 percent of the concentrations of total phosphorus were comprised of inorganic phosphorus. The ratio of concentrations of plant-available phosphorus to concentrations of total phosphorus ranged from 0.6 to 3.5 percent; ratios generally decreased in a downstream direction. About 29,000 acre-feet, or 42,000,000 tons, of sediment can be deposited before Conowingo Reservoir reaches sediment-storage capacity. Assuming the average annual sediment-deposition rate remains unchanged and no scour occurs due to floods, the reservoir system could reach sediment-storage capacity in about 17 years. The reservoir system currently is trapping about 2 percent of the nitrogen, 45 percent of the phosphorus, and 70 percent of the suspended sediment transported by the river to the upper Chesapeake Bay. Once the reservoir reaches sediment-storage capacity, an estimated 250-percent increase in the current annual loads of suspended sediment, a 2-percent increase in the current annual loads of total nitrogen, and a 70-percent increase in the current annual loads of total phosphorus from the Susquehanna River to Chesapeake Bay can be expected. If the goal of a 40-percent reduction in controllable phosphorus load from the Susquehanna River Basin is met before the reservoirs reach sediment-storage capacity, the 40-percent reduction goal will probably be exceeded when the reservoir system reaches sediment-storage capacity.

Maryland, Pennsylvania

Estimation of hydraulic conductivity of a riverbed and aquifer system on the Susquehanna River in Broome County, New York

A three-dimensional finite-difference model of groundwater flow was used to estimate the hydraulic conductivity of riverbed and aquifer material in a 1-square-mile valley-fill aquifer system near a large river in which induced infiltration due to pumping cannot be measured directly. The aquifer consists of a 30- to 70-foot thickness of sand and gravel containing discontinuous layers of compact and silty sand and gravel. Horizontal hydraulic conductivity of the aquifer material, estimated through trial-and-error calibration of simulated water levels to drawdowns measured during an aquifer test, ranged from 500 to 10,000 feet per day; anisotropy (ratio of horizontal to vertical hydraulic conductivity) ranged from 125:1 to 250:1. The vertical hydraulic conductivity of the riverbed was estimated to be 0.1 to 0.5 foot per day, whereas permeameter tests on samples of silty sand and gravel layers from the riverbed yielded vertical hydraulic conductivity of 10 -3 foot per day. A sensitivity analysis indicated that a narrow range of anisotropy values gave the smallest residual error in simulated drawdowns. Residual error increased sharply when the maximum hydraulic conductivity value for the aquifer was lowered to less than 5,000 feet per day. Residual error also was large for large values of vertical hydraulic conductivity of the riverbed, but decreased to a constant amount for values less than 0.1 foot per day. Residual error was relatively insensitive to changes in the storage coefficient and specific yield. A nonlinear regression method that approximated the sensitivity matrix with a perturbation technique was applied to refine the estimates of these parameters and compute standard error of the estimates. The nonlinear regression indicated that the model was sensitive to hydraulic conductivity of the aquifer and anisotropy of the upper part of the aquifer but not to anisotropy of the lower part, and that vertical hydraulic conductivity of the riverbed was less than 0.5 foot per day. The regression method yielded aquifer hydraulic-conductivity values of 210 to 13,000 feet per day and an anisotropy ratio of 350:1 for the upper part of the aquifer; the standard error of these estimates was relatively small. In contrast, the standard errors of estimates of anisotropy in the lower part of the aquifer and the vertical hydraulic conductivity of the riverbed were extremely large.

New York

Simulation of ground-water flow and infiltration from the Susquehanna River to a shallow aquifer at Kirkwood and Conklin, Broome County, New York

A four-layer finite difference model was developed to simulate groundwater flow and induced infiltration to an aquifer underlying the Susquehanna River in the Towns of Kirkwood and Conklin in Broome County, NY. The aquifer consists of sand and gravel deposited in an ancestral river valley during the recession of glacial ice and is in hydraulic connection with the Susquehanna River. In 1984, he aquifer supplied 1.2 million gal/day to well fields in Kirkwood and Conklin. Horizontal hydraulic conductivity of the sand and gravel in the calibrated model ranges from 50 to 10,000 ft/day. Vertical hydraulic conductivity ranges from 1.0 to 80 ft/day. The riverbed thickness was estimated from results of piezometer tests to be 2 ft; the hydraulic conductivity of the riverbed was estimated to be 0.2 ft/day. Root-mean-square differences between computed drawdowns and drawdowns measured in observation wells and piezometers during aquifer tests at the Kirkwood well field ranged from 17% to 24%. The sizes of the well field catchment areas were estimated from a model generated flow net showing the direction and rate of groundwater flow. The Kirkwood catchment area was estimated to be 250 acres, and the Conklin catchment area was 51 acres. Groundwater budgets computed by steady-state simulations showed that 58% of the groundwater withdrawn by the Kirkwood well field is derived from the Susquehanna River during the periods of low river stage and low recharge. The factor to which induced-infiltration rate and size of well field catchment areas are most sensitive, is riverbed hydraulic conductivity.

New York

The effects of the Hurricane Agnes flood on channel geometry and sediment discharge of selected streams in the Susquehanna River basin, Pennsylvania

The Hurricane Agnes flood seems to have hardly changed the channel geometry of the Pennsylvania streams studied in this report. The 10 sites studied generally showed that the width of the stream channels had been changed little by the flood and that streambed altitudes had been lowered less than a foot (0.3 m). The velocity of the streams at a given discharge had decreased. In comparison, the sediment deposited by the December 1964 flood in northwestern California commonly raised the streambed altitudes several feet. The differences in the effects of the two floods may have been produced by the availability of sediment for transport, by the relative size of sediment carried in suspension or bedload, or by the relative magnitudes of the floods.

Pennsylvania

Appraisal of stream sedimentation in the Susquehanna River basin

The Susquehanna River presently transports about 3.0 million tons of sediment annually (110 tons per square mile). Only about 1.8 million tons of sediment enters the head of Chesapeake Bay annually because some sediment is trapped behind the power dams on the lower Susquehanna. Measured annual sediment yields from subbasins in the Susquehanna range from 40 to 440 tons per square mile. The highest yields are from parts of the glaciated section of the basin, in the anthracite coal region, and the Piedmont province. The lowest yields are from parts of the glaciated section of the basin and the Appalachian high plateau. Available data indicate that there has been a downward trend of sediment discharge in recent years. In the future, the high sediment yields associated with urbanization may offset this present downward trend.

Susquehanna River