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Research about Orange County, California

Source-linked reports with geographic coverage including Orange County, California.

17 recordsLinked to original sources
USGS2026

Distribution and abundance of Least Bell’s Vireos ( Vireo bellii pusillus ), Southwestern Willow Flycatchers ( Empidonax traillii extimus ), and Coastal California Gnatcatchers ( Polioptila californica californica ) at the Carbon Canyon Dam, Orange County, California—2025 data summary

Executive Summary We surveyed for Least Bell’s Vireos ( Vireo bellii pusillus ; vireo), Southwestern Willow Flycatchers ( Empidonax traillii extimus ; flycatcher), and Coastal California Gnatcatchers ( Polioptila californica californica ; gnatcatcher) at the Carbon Canyon Dam study area near Brea, California, in 2025. Four gnatcatcher and vireo surveys were completed between April 22 and June 25, 2025, and three flycatcher surveys were completed between May 15 and June 25, 2025. We detected 14 territorial male vireos, 12 of which were paired. We also detected a transient vireo. Juvenile vireos were observed in two territories during surveys. Of the five vireo nests incidentally located during surveys, three were parasitized by Brown-headed Cowbirds ( Molothrus ater ). Vireos were reported in four habitat types: (1) mixed willow riparian, (2) riparian scrub, (3) upland, and (4) non-native vegetation. The dominant tree species in vireo territories was Goodding’s black willow ( Salix gooddingii ). Most vireo territories (12) were in habitat with greater than 50-percent native vegetation. The most common exotic species in vireo territories was poison hemlock ( Conium maculatum ). No flycatchers or gnatcatchers were observed during surveys.

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USGS2022

Middle and late Miocene marine mammal assemblages from the Monterey Formation of Orange County, California

This study provides new stratigraphic data and identifications for fossil marine mammals from the Monterey Formation in the Capistrano syncline, Orange County, California, showing that there are two distinct marine mammal assemblages. Until now, marine mammals from the Monterey Formation of Orange County have been considered to represent a single assemblage that is 13.0–10.0 Ma in age. By combining data from diatoms with the geographic positions of sites, faunal analysis, and data from the literature, we can assign 59 sites to three main levels: the lower part (ca. 16–13 Ma), the middle part (ca. 13–10 Ma), and the upper part (ca. 10–8 Ma). We assigned 308 marine mammal specimens to 38 taxa, resulting in 97 occurrences (unique record of a taxon for a given site). Of the 38 taxa we identified within the study area, 15 taxa are restricted to the lower part of the Monterey Formation, 15 are restricted to the upper part of the Monterey Formation, eight were found in both, and none has yet been reported from the middle (possibly condensed) section. Six of the eight taxa that occur in both the lower and upper parts of the Monterey Formation are higher-level taxa, which accounts for their broad temporal range. The recognition of two distinct marine mammal assemblages in the Monterey Formation of Orange County is an important step toward a better-calibrated sequence of faunal evolution in the region while improving the utility of marine mammals for regional biostratigraphy.

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USGS2021

Conservation implications of spatiotemporal variation in the terrestrial ecology of Western spadefoots

Conservation of species reliant on ephemeral resources can be especially challenging in the face of a changing climate. Western spadefoots ( Spea hammondii ) are small burrowing anurans that breed in ephemeral pools, but adults spend the majority of their lives underground in adjacent terrestrial habitat. Western spadefoots are of conservation concern throughout their range because of habitat loss, but little is known about the activity patterns and ecology of their terrestrial life stage. We conducted a radio-telemetry study of adult western spadefoots at 2 sites in southern California, USA, from December 2018 to November 2019 to characterize their survival, behavior, and movements from breeding through aestivation to refine conservation and management for the species. Western spadefoot survival varied seasonally, with risk of mortality higher in the active season than during aestivation. The probability of movement between successive observations was higher during the winter and spring and when atmospheric moisture was high and soil water content at 10-cm depth was low. The amount of rain between observations had the strongest effect on the probability of movement between observations; for every 20 mm of rainfall between observations, western spadefoots were 2.4 times more likely to move. When movements occurred, movement rates were highest when both relative humidity and soil water content at 10-cm depth were high. The conditions under which western spadefoots were likely active on the surface, likely to have moved, and moved at the highest rates are conditions that reduce the risk of desiccation of surface-active spadefoots. Western spadefoot home range areas varied between study sites and were mostly <1 ha, although 1 individual's home range area was >6 ha. Western spadefoots rapidly dispersed from the breeding pools, and asymptotic distances from the breeding pool were generally reached by June. The asymptotic distance from the breeding pool varied between sites, with the 95th percentile of the posterior predictive distribution reaching 486 m at 1 site and 187 m at the other. Western spadefoots did not select most habitat components disproportionately to their availability, but at Crystal Cove State Park, they avoided most evaluated vegetation types (graminoids, forbs, and shrubs). Spatial variation was evident in most evaluated western spadefoot behaviors; context-dependent behavior suggests that site-specific management is likely necessary for western spadefoots. Furthermore, comparison with an earlier study of western spadefoots at Crystal Cove State Park indicated substantial temporal variation in western spadefoot behavior. Therefore, basing management decisions on short-term studies might fail to meet conservation objectives. Better understanding the influences of spatial context and climatic variation on western spadefoot behavior will improve conservation efforts for this species.

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USGS2021

Conservation genomics of the threatened western spadefoot, Spea hammondii, in urbanized southern California

Populations of the western spadefoot ( Spea hammondii ) in southern California occur in one of the most urbanized and fragmented landscapes on the planet and have lost up to 80% of their native habitat. Orange County is one of the last strongholds for this pond-breeding amphibian in the region, and ongoing restoration efforts targeting S. hammondii have involved habitat protection and the construction of artificial breeding ponds. These efforts have successfully increased breeding activity, but genetic characterization of the populations, including estimates of effective population size and admixture between the gene pools of constructed artificial and natural ponds, has never been undertaken. Using thousands of genome-wide single-nucleotide polymorphisms, we characterized the population structure, genetic diversity, and genetic connectivity of spadefoots in Orange County to guide ongoing and future management efforts. We identified at least two, and possibly three major genetic clusters, with additional substructure within clusters indicating that individual ponds are often genetically distinct. Estimates of landscape resistance suggest that ponds on either side of the Los Angeles Basin were likely interconnected historically but intense urban development has rendered them essentially isolated, and the resulting risk of interruption to natural metapopulation dynamics appears to be high. Resistance surfaces show that the existing artificial ponds were well-placed and connected to natural populations by low-resistance corridors. Toad samples from all ponds (natural and artificial) returned extremely low estimates of effective population size, possibly due to a bottleneck caused by a recent multi-year drought. Management efforts should focus on maintaining gene flow among natural and artificial ponds by both assisted migration and construction of new ponds to bolster the existing pond network in the region.

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USGS2021

Tarentola annularis (white-spotted wall gecko)

USA: CALIFORNIA: Orange Co.: San Juan Capistrano (33.51°N,117.66°W; WGS 84). 25 August 2020. Samuel Fisher, Chelsea Martin, Robert Fisher. Verified by Gregory B. Pauly. Natural History Museum of Los Angeles County (LACM 191974). New county record. One juvenile (33 mm SVL) was collected, and another juvenile was seen 40 m away. Another juvenile was also observed during a second visit to the site on 19 September 2020. Wall geckos were first documented at this site since at least 2019 by Gary Nafis (G. Nafis, pers. comm. and as posted on www.californiaherps.com; 23 Aug 2020). Given that multiple individuals were observed at this site over 2 mo, this appears to be an established population. Invasive T. annularis were first detected in California in Redlands, San Bernardino County in the early 2000s (Wilcox et al. 2014. Herpetol. Rev. 45:464). This new Orange County population is ca. 80 km SW of the other known California population. While T. annularis has not spread much in the downtown urban center in Redlands over the last 20 years (S. Fisher, unpubl. data), it is possible it might expand its range more rapidly in a less urbanized habitat if there were more landscaping and natural features present. The only other published records for North America are from Florida where they are also invasive, and they have been known since the 1990s from several locations and continued to spread (Krysko et al. 2016. IRCF Rept. Amphib. 23:110-143). In the native range of T. annularis their habitat consists of desert, indicating that even though they are able to breed and persist in coastal Orange County they may not be in the optimal habitat (Ibrahim 2004. Zool. Middle East 31:23–38). A potential concern is that if T. annularis becomes more widespread in Southern California, they could present a risk to endemic nocturnal rock-dwelling species such as Xantusia henshawi and Phyllodactylus nocticolus because T. annularis has been shown to engage in saurophagy (Ibrahim 2004, op. cit.). It is much larger than these species (X antusia henshawi SVL = 70 mm; Phyllodactylus nocticolus SVL = 63 mm; Tarentola SVL = 108 mm) and well adapted to desert habitats where it could be a potential predator or competitor.

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USGS2020

Establishment of brown anoles (Anolis sagrei) across a southern California county and potential interactions with a native lizard species

The brown anole, Anolis sagrei , is a native species to the Caribbean; however, A. sagrei has invaded multiple parts of the USA, including Florida, Louisiana, Hawai’i and more recently California. The biological impacts of A. sagrei invading California are currently unknown. Evidence from the invasion in Taiwan shows that they spread quickly and when immediate action is not taken eradication stops being a viable option. In Orange County, California, five urban sites, each less than 100 ha, were surveyed for an average of 49.2 min. Approximately 200 A. sagrei were seen and verified across all survey sites. The paucity of native lizards encountered during the surveys within these sites suggests little to no overlap between the dominant diurnal western fence lizard, Sceloporus occidentalis , and A. sagrei . This notable lack of overlap could indicate a potentially disturbing reality that A. sagrei are driving local extirpations of S. occidentalis .

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USGS2020

Mitigation ponds offer drought resiliency for western spadefoot (Spea hammondii) populations

Synergistic effects of habitat loss, drought, and climate change exacerbate amphibian declines. In southern California urbanization continues to convert natural habitat, while prolonged drought reduces surface water availability. Protection of biodiversity may be provided through mitigation; however, the long-term effectiveness of different strategies is often unreported. As a mitigation measure for building a new development within occupied Spea hammondii (western spadefoot) habitat in Orange County, California, artificial breeding pools were constructed at two off-site locations. Spea hammondii tadpoles were translocated from the pools at the development site to two off-site locations in 2005–2006. We conducted surveys a decade later (2016) to determine if S. hammondii were persisting and breeding successfully at either the original development site or the human-made pools at the two mitigation sites. We also verified hydroperiods of any existing pools at all three locations to see if any held water long enough for successful S. hammondii recruitment through metamorphosis. During our study, no pooling water was detected at two of three main sites surveyed, and no S. hammondii were observed at these locations. Twelve of the 14 pools created at only one of the two mitigation sites held water for over 30 d, and we detected successful breeding at seven of these pools. Recruitment in some mitigation ponds indicated that S. hammondii habitat can be created and maintained over 10+ yr, even during the fifth year of a catastrophic drought. Therefore, this may also serve as a conservation strategy to mitigate climate change and habitat loss.

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USGS2018

Modeling resource selection of bobcats (Lynx rufus) and vertebrate species distributions in Orange County, southern California

For nature reserves in urban settings, wildlife and wildlife habitats may be affected by recreational activities and intensive, adjacent development. Sustaining biodiversity in such reserves is a challenge for land and natural resource managers, but identification of core areas and key resources for wildlife species may help in planning for current and emerging threats. To help identify core areas and resources, we conducted spatial analyses and predictive modeling of vertebrate distributions for a network of nature reserves in densely populated Orange County, California. We primarily focused on bobcats ( Lynx rufus ), a species with a strong association with natural habitat. Bobcat space use has been correlated with broad, simple land-use categories, but relatively little is known about the influence of greater landscape complexity on habitat suitability for bobcats. To examine habitat selection by bobcats, we developed spatial data layers representing environmental factors that might influence this species, and we used previously collected Global Positioning System tracking data for 30 male and 21 female bobcats to indicate bobcat response to complex landscape factors. We examined these inputs using Resource Selection Function (RSF) modeling and developed spatially explicit models of the probability of bobcat use (selection or avoidance) of landscape characteristics. RSF models highlighted the general importance of reserve habitat for bobcats, but suggested that female bobcats were more dependent that male bobcats on habitat within designated reserves. Male bobcats, which range more widely than female bobcats, were associated with undeveloped areas both within and outside reserves. Small areas were present outside reserves that seemed to provide additional suitable habitat or movement areas for bobcats, potentially through restoration, connectivity, or reduced edge effects. Although bobcat RSFs suggested areas of high value to this species and potentially other species, taxa can differ greatly in their resource-selection and spatial requirements. Thus, for several species of reptiles, amphibians, and birds, we adapted species distribution models based on occurrence data to examine the response of other vertebrates to the landscape. To identify potential High-Value Areas (HVAs) for single or multiple species, we then developed a step-wise filtering process that can be applied to a series of spatial data layers. We provide examples of alternative decision models for HVAs that capture different elements of biodiversity and a range of management considerations. As landscape and management challenges change, these spatial layers and decision rules can be adjusted based on new information. Our approach thus establishes a general framework for identifying high-value habitat that can be used for current management decisions and refined in the future, depending on management interests and goals and the availability of suitable quality data or adequate surrogate information.

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USGS2015

Mark-recapture and mark-resight methods for estimating abundance with remote cameras: a carnivore case study

Abundance estimation of carnivore populations is difficult and has prompted the use of non-invasive detection methods, such as remotely-triggered cameras, to collect data. To analyze photo data, studies focusing on carnivores with unique pelage patterns have utilized a mark-recapture framework and studies of carnivores without unique pelage patterns have used a mark-resight framework. We compared mark-resight and mark-recapture estimation methods to estimate bobcat ( Lynx rufus ) population sizes, which motivated the development of a new "hybrid" mark-resight model as an alternative to traditional methods. We deployed a sampling grid of 30 cameras throughout the urban southern California study area. Additionally, we physically captured and marked a subset of the bobcat population with GPS telemetry collars. Since we could identify individual bobcats with photos of unique pelage patterns and a subset of the population was physically marked, we were able to use traditional mark-recapture and mark-resight methods, as well as the new &ldquo;hybrid&rdquo; mark-resight model we developed to estimate bobcat abundance. We recorded 109 bobcat photos during 4,669 camera nights and physically marked 27 bobcats with GPS telemetry collars. Abundance estimates produced by the traditional mark-recapture, traditional mark-resight, and &ldquo;hybrid&rdquo; mark-resight methods were similar, however precision differed depending on the models used. Traditional mark-recapture and mark-resight estimates were relatively imprecise with percent confidence interval lengths exceeding 100% of point estimates. Hybrid mark-resight models produced better precision with percent confidence intervals not exceeding 57%. The increased precision of the hybrid mark-resight method stems from utilizing the complete encounter histories of physically marked individuals (including those never detected by a camera trap) and the encounter histories of naturally marked individuals detected at camera traps. This new estimator may be particularly useful for estimating abundance of uniquely identifiable species that are difficult to sample using camera traps alone.

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USGS2015

Can orchards help connect Mediterranean ecosystems? Animal movement data alter conservation priorities

As natural habitats become fragmented by human activities, animals must increasingly move through human-dominated systems, particularly agricultural landscapes. Mapping areas important for animal movement has therefore become a key part of conservation planning. Models of landscape connectivity are often parameterized using expert opinion and seldom distinguish between the risks and barriers presented by different crop types. Recent research, however, suggests different crop types, such as row crops and orchards, differ in the degree to which they facilitate or impede species movements. Like many mammalian carnivores, bobcats ( Lynx rufus ) are sensitive to fragmentation and loss of connectivity between habitat patches. We investigated how distinguishing between different agricultural land covers might change conclusions about the relative conservation importance of different land uses in a Mediterranean ecosystem. Bobcats moved relatively quickly in row crops but relatively slowly in orchards, at rates similar to those in natural habitats of woodlands and scrub. We found that parameterizing a connectivity model using empirical data on bobcat movements in agricultural lands and other land covers, instead of parameterizing the model using habitat suitability indices based on expert opinion, altered locations of predicted animal movement routes. These results emphasize that differentiating between types of agriculture can alter conservation planning outcomes.

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USGS2000

Age and paleoenvironmental significance of mega-invertebrates from the "San Pedro" Formation in the Coyote Hills, Fullerton and Buena Park, Orange County, Southern California

The "San Pedro" Formation in the Coyote Hills contains an invertebrate fossil as-semblage of 184 taxa from 158 localities. The fauna consists of two annelids, 174 mollusks (80 bivalves, 94 gastropods, and three scaphopods), five arthropods, and three echinoids, along with other minor constituents recognized by not specifically identified during the present study. These fossils are divided into three assemblages; 1) a lower, Pliocene assemblage (which may not differ ecologically from the middle fauna), 2) a middle, cool water assemblage, and 3) an upper, temperate to warm water. These fossils suggest a probably late Pliocene to early Pleistocene age for outcrops of the "San Pedro" Formation in the Coyote Hills. A fourth assemblage with a limited, restricted marine fauna occurs in the overlying Coyote Hills Formation. The occurrence of Solamen columbianum (Dall) (Mollusca: Bivalvia) in the "San Pedro" Formation of the Coyote Hills marks its first occurrence as a fossil. The oldest fossil occurrence of the gastropods Tegula pulligo (Gmelin), questionably Haliotis cracherodii Leach, and the crustacean Randallia ornata (Randell) occurs in the "San Pedroï" Formation in the Coyote Hills.

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USGS2000

Stormflow chemistry in the Santa Ana River below Prado Dam and at the diversion downstream from Imperial Highway, southern California, 1995-98

The Santa Ana River drains about 2,670 square miles of the densely populated coastal area of southern California, near Los Angeles. Almost all the flow in the river, more than 200,000 acre-feet annually, is diverted into ponds where it infiltrates and recharges underlying aquifers. About 2 million people are dependent on these aquifers for water supply. Stormflow in the Santa Ana River is considered a source of "high-quality" water suitable for use as a source of ground-water recharge. To test this assumption, stormflow samples were collected at two locations--below Prado Dam and at the diversion point downstream from Imperial Highway--for 12 winter storms between 1995 and 1998. Nitrate concentrations decreased during stormflow from a median concentration of 7.8 milligrams per liter in base flow to concentrations less than 1 milligram per liter in some large storms. Concentrations of chemically reduced forms of nitrogen (nitrite, ammonia, and organic nitrogen) increased during stormflow and are the predominant forms of nitrogen in large stormflows. Dissolved organic carbon (DOC) concentrations increased from a median concentration of 4.6 milligrams per liter in base flow to more than 20 milligrams per liter in some stormflows. Concentrations of DOC were especially high during the first storm of the rainy season, and large increases in DOC concentrations were measured even as a result of small early season storms that did not cause large increases in streamflow. DOC present during early season stormflow had less ultraviolet absorbance at 254 nanometers (UV 254 ) per unit of carbon than did DOC from late season stormflows. DOC in water held in storage behind Prado Dam had the highest UV 254 absorbance per unit of carbon. Maximum pesticide concentrations in stormflow did not exceed U.S. Environmental Protection Agency Maximum Contaminant Levels. Most pesticide concentrations were less than 1 microgram per liter and less than the detection limits obtained using standard drinking water analyses. Increases in concentrations of pesticides such as diazinon, malathion, and chlorpyrifos in stormflow result from runoff from urban areas downstream from Prado Dam. In general, large late season stormflows have the most pesticide detections of all stormflows sampled. Concentrations of methyl tert-butyl ether (MTBE), a gasoline additive, during base flow were as high as 0.9 microgram per liter and concentrations decreased during stormflow. Like pesticides, the concentrations did not exceed the U.S. Environmental Protection Agency Maximum Contaminant Levels for MTBE.

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USGS1969

A study of deep aquifers underlying coastal Orange County, California

Deep untapped aquifers of late Pliocene age, which contain water having 1,000 to 2,000 milligrams per liter of dissolved solids, underlie most of the coastal part of Orange County. Inland from the Newport-Inglewood structural zone, the depth to the base of aquifers containing fresh water ranges from 1,000 to 2,500 feet below mean sea level. The aquifers are composed of fine to medium sand with locally occurring beds of coarse sand and gravel. Permeability generally ranges from less than 50 gallons per day per square foot to 300 gallons per day per square foot. Pressure head increases with depth of the aquifer to as much as 40 feet above land surface near the base of fresh water. The water is of the sodium bicarbonate type, increasing in salinity with depth. Organic material imparts an amber color to the water, which becomes more distinct with depth. A test well, drilled to 926 feet and perforated from 784 to 884 feet, yielded 1,950 gallons per minute with about 90 feet of drawdown. The water is of the sodium bicarbonate type with dissolved solids of 225 mg/1. Additional studies are needed to evaluate the possibilities of subsidence due to pumping from the deep aquifers, to determine the vertical and horizontal permeabilities of confining beds, and to monitor the changes in water quality and water level.

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