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Research about New York

Source-linked reports with geographic coverage including New York.

At least 37 records · Page 2Linked to original sources
USGS2026

Exploring management options for moose at their southern range limits considering growing disease risk

1. Populations of cold-adapted species are increasingly vulnerable along their low-latitude range limits due to shifting environmental conditions, biotic interactions, and anthropogenic pressures. Managing these populations is particularly challenging because of complex ecological dynamics, conflicting stakeholder interests, and decision-making under uncertainty. 2. We explored population growth (λ) of moose ( Alces alces ) under different hypothetical management scenarios, simulating combinations of five hypothetical harvest levels with three levels of disease impact. 3. Facing current disease, the population could support multiple levels of conservative harvest. Under elevated levels of disease-caused mortality, projections indicated declines for all harvest scenarios. We projected increases across all harvest scenarios when overlap with white-tailed deer ( Odocoileus virginianus ) was hypothetically reduced and disease mortality in moose minimized. We investigated whether uncertainty in moose demographic parameters altered population trajectory, and found changes in adult fecundity and calf survival could alter harvest decisions when λ<1. 4. Practical implication . While moose population trajectories may remain stable under current conditions, management of white-tailed deer that reduces moose exposure to lethal parasites may provide the greatest utility in sustaining moose in New York given the potential for increased disease. Continued monitoring of population size, growth, and disease prevalence would inform sustainable moose harvest levels that balance social and ecological management considerations.

New York↗
USGS2026

Investigation of fish communities in natural channel sections of the Mohawk River, New York

Little is known about the natural resources in the natural channel sections of the Mohawk River between Rome and Frankfort, New York, where the river channel runs separately from and parallel to the Erie Canal. This river section runs through multiple locations that are listed as active remediation sites under New York’s Inactive Hazardous Waste Disposal Site Program and has negligible public or commercial access. As a result, there is minimal recreational usage of this river section, and efforts to conduct biological sampling have been limited. To better understand the composition of fish communities and contaminant concentrations in the natural channel of the Mohawk River, the U.S. Geological Survey, in cooperation with the New York State Department of Environmental Conservation, sampled resident fish in the 34-kilometer section from the mouth of Oriskany Creek downstream to Frankfort. Fish communities were sampled using boat electrofishing during 2021, 2023, and 2024 across multiple reaches within this section. These data were used to estimate species richness (number of species), relative abundance and biomass (catch rates), population size structure (distribution of lengths), and fish condition (a proxy for health). Some gamefish specimens were also analyzed to determine contaminant concentrations in fish tissue. A total of 1,531 individual fish and 38 fish species were captured across all surveys. Seventeen of the 38 (45 percent) species were classified as native to the Mohawk River watershed, whereas 21 of the 38 (55 percent) species were classified as nonnative. Some popular gamefish species such as largemouth bass ( Micropterus salmoides ) and smallmouth bass ( Micropterus dolomieu ) were abundant in most reaches, whereas others such as walleye ( Sander vitreus ) and northern pike ( Esox lucius ) were found sporadically. Only one round goby ( Neogobius melanostomus ) was captured, indicating that this high-profile invasive species remains uncommon in this habitat. A backwater reach had the greatest relative abundance and condition of many species. This indicates connected lentic habitats such as oxbows and backwaters may be important nursery and refuge areas in the aquatic ecosystem. Polychlorinated biphenyl (PCB) concentrations in fish tissue were highly elevated relative to the New York State Department of Health (NYSDOH) fish consumption “don’t eat” advisory guideline. Some specimens exceeded the guideline by an order of magnitude or more, particularly those from a localized area downstream from the Utica Harbor Dam. Concentrations of perfluorooctanesulfonic acid (PFOS) often approached the NYSDOH “don’t eat” consumption guideline but only one sample exceeded the guideline. Concentrations of other contaminants such as mercury and pesticides were consistently measured at less than the “don’t eat” consumption guidelines. These data indicate PCBs remain the primary contaminant of concern in the natural channel of the Mohawk River and are readily bioaccumulating in aquatic organisms despite prior remediation measures. Taken together, the findings in this report are intended to inform future decisions related to fisheries management, public access, recreational usage, and fish consumption advisories.

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USGS2026

Evaluating drivers of environmental change in a lake sediment core: Insights from spectroscopic metrics of water-extractable organic matter and stable carbon isotopes

Freshwater lakes play a critical role in the global carbon cycle by storing and transforming organic matter (OM) from both terrestrial and aquatic sources. Small lakes in northern temperate regions, despite their limited surface area, disproportionately influence regional carbon budgets. Buried sediments integrate OM inputs over time and archive ecosystem responses to natural and anthropogenic disturbances. However, the direction and magnitude of recent environmental changes on sediment carbon (C) dynamics remain poorly understood. A 23-cm core was collected from a small temperate lake in northeastern USA to evaluate sediment OM content and composition over timescales relevant to historical land-use change, damming, and recovery from acid deposition. Patterns in OM burial and source contributions were revealed via elemental and isotopic analyses of bulk OM and ultraviolet-visible spectrophotometry of water-extractable organic matter (WEOM). The optical metrics expanded observations of likely OM sources beyond the information gained from bulk carbon metrics (total carbon, δ 13 C). The aromaticity of WEOM increased downcore, which is consistent with a shift from increased terrestrial inputs during early logging and damming activity (pre ∼1920) to more microbial-derived OM in recent surficial sediments. Future applications of WEOM optical properties as complements to traditional geochemical metrics can enhance interpretations of lake ecosystem responses recorded in lake sediments to environmental perturbations in temperate lakes.

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USGS2026

Evidence for organic and igneous carbon sources in the Mesoproterozoic Adirondack Highlands graphite district, New York

This study examined the origin of graphite mineralization in the Mesoproterozoic Adirondack Highlands. Flake graphite was mined from the historic mining district around Ticonderoga, New York, USA, from the 1850s to the 1920s. Most of the production and reserves from the district are disseminated graphite from feldspathic quartz schists (e.g., Dixon-American Graphite Co. mine, Faxon property, Flake Graphite Company). Protolith sediments of the schists were deposited in the Trans-Adirondack backarc basin at ca. 1.25 Ga and were metamorphosed to high grade at 1.18–1.15 Ga during the accretionary Shawinigan orogeny and at 1.09–1.02 Ga during the Ottawan phase of the Grenvillian orogeny. Major elements and carbon isotopes of graphite from schists (δ 13 C = −28.1‰ to −5.4‰ relative to Vienna Peedee belemnite) are consistent with derivation from organic carbon in protolith sandstones that devolatilized during metamorphism. Some small mines and prospects in the district mined graphitic calcite marbles and clinopyroxene ± scapolite skarns associated with a pegmatite suite dated by U-Pb in zircon to 1.04–1.01 Ga (e.g., Lead Hill and Crown Point deposits), and rare graphite veins are observed at several deposits. Hydrothermal flake graphite from pegmatites, skarns, and veins are distinct from graphite in schist-hosted deposits and have δ 13 C values that cluster around −7‰ to −5‰, consistent with deposition from igneous CO 2 . Covariation of carbon and oxygen stable isotopes and U-Pb zircon geochronology are not compatible with precipitation from fluids derived from country rock metapelites or marbles. Some graphite districts elsewhere show compelling evidence for remobilization and redeposition of sedimentary-derived carbon as hydrothermal graphite, sometimes as thick veins producing world-class, high-grade deposits. In the Adirondacks, there is evidence for two generations of graphite mineralization with distinct carbon sources: syngenetic graphite with an organic origin in Shawinigan quartz schists and epigenetic graphite with an igneous origin in Ottawan skarns and pegmatites.

New York↗
USGS2026

A targeted approach for mapping groundwater discharge to surface water and fish thermal refuge in four Lake Ontario tributaries

The duration, magnitude, and frequency of heatwaves are predicted to increase in the coming decades, a combination that can reduce the survival of many fish species. Across the world, there is broad interest in identifying thermal refuge for heat-intolerant fish species and exploring opportunities to enhance or protect these areas. Because deeper groundwater maintains a relatively constant temperature, groundwater-influenced areas along streams can provide cool-water refuge for fish during periods of extreme heat. A targeted approach was developed for identifying existing cold-water zones and areas of substantial groundwater discharge in four high priority Lake Ontario tributaries. Our approach included: (1) predicting where groundwater discharge is most likely with a simple geospatial model and (2) using model predictions to select field sites for intensive high-resolution study, including ground-based mapping of groundwater features (springs, seeps, tributaries) as well as drone-based optical and thermal infrared surveys. Results from field sites were used to both verify model performance and map different types and aerial extents of thermal anomalies. Geospatial modelling successfully predicted regions of widespread groundwater upwelling, later verified and mapped by field and drone surveys. Comparison of model and field survey results further highlighted specific geospatial layers, such as soil/bedrock types and topographic wetness index, as being particularly useful for predicting groundwater influence on streams in the study area. In addition, a comparison of geospatial model results with a model of fish abundances along the studied streams showed significant positive correlations for many heat-intolerant fish species over a wide geographic area. The approach developed in this study can be applied to other watersheds to highlight areas of probable groundwater discharge and could be used by fishery and water resource managers to support cold-water fish habitat management decision-making and resource conservation.

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USGS2026

Bedrock geologic map of the Eagle Lake quadrangle, Essex County, New York

The bedrock geology of the 7.5-minute Eagle Lake quadrangle, Essex County, New York, consists of deformed and metamorphosed Mesoproterozoic gneisses of the Adirondack Highlands unconformably overlain by weakly deformed lower Paleozoic sedimentary rocks of the Champlain Valley. The Mesoproterozoic rocks occur on the eastern edge of the Adirondack Highlands and represent an extension of the Grenville Province of Laurentia. Granulite facies Mesoproterozoic paragneiss, marble, and amphibolite hosted the emplacement of an anorthosite-mangerite-charnockite-granite (AMCG) suite, now exposed mostly as orthogneiss, at approximately 1.18–1.15 giga-annum (Ga, billion years before present). The earliest of four phases of deformation (D1) predated AMCG magmatism and is characterized by gneissosity, rarely preserved F1 isoclinal folds, and migmatite in the paragneiss host rocks. A sample of hornblende quartz syenite from the AMCG suite, collected from an abandoned railroad cut on Old Furnace Road, yielded a U-Pb zircon age of 1,149±10 million years before present. D2 deformation produced a composite penetrative gneissosity, migmatite, and isoclinal F2 folds. Towards the end of D2, felsic magmatism (including the regionally extensive Lyon Mountain Granite Gneiss, abbreviated “LMG”) spread by penetrative migration as semiconcordant alkali feldspar granite sheets subparallel to S2 into the previously deformed lithologies. The LMG crystallized at approximately 1.15 to 1.14 Ga and displays synkinematic F2 folds thus constraining the time of D2 deformation. Exhumation of the Marcy anorthosite began during D3 along a mylonitic extensional detachment, as a type of core complex. Protracted D3 produced F3 folds exhibited in regional domes and basins, such as the Hammondville antiform, reactivation of the S2 foliation, partial melting, metamorphism, metasomatism, iron ore remobilization, and intrusion of magnetite-bearing pegmatite both as layer-parallel sills and crosscutting dikes. D4 created NE- and NW-trending boudinage, local high-grade ductile shear zones, and crosscutting granitic pegmatite dikes. Kilometer (km)-scale lineaments readily observed in lidar data are Ediacaran mafic dikes and Phanerozoic brittle faults. Lower Paleozoic rocks are part of the Early Cambrian to Late Ordovician great American carbonate bank on the ancient margin of Laurentia. The Potsdam Sandstone preserves the Cambrian stratigraphy in outliers above the Great Unconformity. The Paleozoic rocks are weakly folded and block faulted. Parts of the quadrangle are covered by undifferentiated glacial deposits, but much of the quadrangle contains only a variably thick, veneer of unmapped glacial till over significant areas of exposed bedrock. The map also shows waste rock piles and locations of historical mining operations. This study was undertaken to improve our understanding of the bedrock geology in the Adirondack Highlands, establish a modern framework for 1:24,000-scale bedrock geologic mapping in the Adirondack Mountains, and provide a modern context for historical mines. This Scientific Investigations Map of the Eagle Lake 7.5-minute quadrangle consists of a map sheet, an explanatory pamphlet, and a geographic information system database that includes bedrock geologic units, faults, outcrops, and structural geologic information. The map sheet includes a bedrock geologic map, a correlation of map units, a description of map units, an explanation of map symbols, and two cross sections. The explanatory pamphlet includes a discussion of the geology.

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USGS2026

Compounding of 100-year coastal floods by rainfall in an urban environment

Coastal and pluvial flooding are both becoming more prevalent and severe due to climate change and urbanization in floodplains. The co-occurrence of these flood drivers is generally assumed to exacerbate the resulting flood impacts, a result referred to as compound flooding. However, few observational or modeling studies have investigated the circumstances under which this occurs. Here, we study the impacts of these combined flood drivers and evaluate the implicit hypothesis of official flood maps, which is that rainfall has a negligible impact on the flood depth and flooded area due to a 100 year coastal flood. A coastal system model, configured to capture coastal and pluvial flood drivers, is used. We evaluate the flooding for different urban landform types, including coastal landfill (human-made land), convergent areas (topographic depressions) and other urban terrain, within a model domain covering the Jamaica Bay watershed of New York City. A scenario-based strategy is adopted with a 100 year coastal flood as a control simulation, to which we add a set of realistic scenarios of rainfall data from historical tropical cyclones. We also apply a joint probability analysis framework with historical data to evaluate the probability of these compound coastal-pluvial scenarios. Results reveal cases where the pluvial driver compounds the coastal flood through expansion of the flood zone, with a 17% chance of rainfall increasing the flood area by 6%–38%, and a 5% chance of an increase of 61%–73%. It is rare that floods are significantly deepened but when deepening occurs, it is more common for the convergent zone than for the coastal landfill. These findings quantitatively assess the potential of the pluvial driver to exacerbate flooding, which may influence emergency management strategies such as evacuation plans, shelter arrangements, and related preparedness measures.

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USGS2026

Wildfire smoke reduces the vocal activity of imperiled grassland birds in New York State

Smoke from new fire regimes driven by climate change may affect biodiversity in new regions of the world. Wildfires that occurred in eastern Canada in 2023 burned nearly 7.8 million hectares of forest, sending smoke throughout the northeastern United States. We leveraged passive acoustic monitoring to investigate real-time effects of wildfire smoke on vocalization behavior of globally imperiled grassland birds during the breeding season in open land covers across New York State. We determined an overall negative effect of elevated smoke levels on breeding grassland bird vocal activity. We observed the strongest vocalization responses in Bobolink ( Dolichonyx oryzivorus ) – a colonial breeding, grassland-obligate species; Bobolink vocal activity sharply dropped during intense smoke early in the breeding season, yet increased during a milder smoke event later in the breeding season. Our results indicate that wildfire smoke can present an additive stressor to already imperiled grassland bird species via potential fitness reductions from decreased communication. While some aspects of smoke exposure may be uncontrollable, our results suggest that increased attention to conservation practices that promote grassland birds in the Northeast could be prioritized to offset negative effects of increased smoke associated with global change.

New York↗
USGS2026

Sustainability trade-offs at the nexus of solar energy, agriculture, and biodiversity

A rapid transition to renewable energy is necessary for achieving global decarbonization targets, but siting conflicts, particularly beyond the built environment, remain a key barrier to sustainable development. At the same time, climate-induced pressures on biodiversity intensify the socio-ecological trade-offs within the energy-agriculture-biodiversity nexus. Using New York State as a case study, we assess the geographic implications of utility-scale solar energy development under competing land-use priorities. We apply a mixed-integer linear programming (MILP) optimization model to evaluate solar buildout across three distinct scenarios: minimizing cost, prioritizing agricultural preservation, and conserving biodiversity, employing a lexicographic hierarchy to enforce a strict ordering of stakeholder priorities. Results indicate that New York can meet its mid-century decarbonization goals by deploying 46,216 MW dc of solar energy, however, achieving this goal involves considerable land-use trade-offs. A cost-minimizing scenario disproportionately targets pasture and hay lands (>40,000 ha), nearly half of which overlap with grassland bird habitat and broader biodiversity areas. Prioritizing agriculture spares ∼80 % of farmland but creates potential for deforestation of over 41,000 ha. Biodiversity-conscious siting avoids ecologically sensitive areas and increases the annualized total costs by 0.17 %, indicating economic feasibility. Our findings highlight the need for spatially informed, integrative land-use strategies that reconcile climate goals with ecological and agricultural values. By linking geospatial optimization with socio-ecological criteria, this work contributes a transferable framework to inform just and ecologically responsible energy transitions in multifunctional landscapes, offering new insights into how geography can advance sustainable development.

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USGS2026

Review of Grasse River Lake Sturgeon habitat use and possible post-Superfund remediation agency actions

The Grass River (hereafter Grasse River) historically served as a major source of fisheries production for the Saint Lawrence River (hereafter St. Lawrence River) basin, providing critical spawning habitat and support for other life history stages of numerous species including the culturally and ecologically significant Lake Sturgeon ( Acipenser fulvescens ). Decades of environmental degradation resulted in designation of the lower Grasse River as the Grasse River Superfund site and part of the St. Lawrence River Area of Concern (AOC) at Massena/Akwesasne. The primary problems were severe contamination of sediments and fish, with numerous environmental beneficial use impairments (BUIs) including losses and degradation of habitat and diminished animal populations that limited fisheries production and reduced ecosystem services provided by the Grasse River. Efforts to restore the lower Grasse River within the AOC were initiated in 2019 to remove or isolate contaminants, repair damaged habitats, and rebuild fish and wildlife populations. The purpose of this report is to 1) summarize the history and contemporary status of environmental conditions and fisheries in the Grasse River, with an emphasis on Lake Sturgeon; 2) summarize remediation and restoration activities and how they may affect fisheries habitat and populations; and 3) discuss potential options for continued habitat remediation in addition to currently proposed restoration actions.

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USGS2025

Moose survival and habitat‐associated risk of endoparasites

Parasite-induced morbidity and mortality can alter the trajectories of incidental host populations. Yet, parasites rarely act in isolation and may be one of a multitude of biotic and abiotic stressors that collectively shape mortality risk in vertebrate populations. We quantified sources of mortality in a low-density population of moose ( Alces alces ) in New York State and investigated factors including parasite infection, nutritional limitation, and thermal stress influencing mortality risk in calf moose. We observed high rates of annual survival (0.81–0.92) in adult ( n = 25) and calf ( n = 27) moose monitored 2015–2018 and 2022–2024, respectively. The majority of cause-specific mortality was attributed to disease induced by giant liver fluke ( Fascioloides magna ; 75% in adults, 67% in calves). Calf mortality risk increased by 72% for every unit increase in giant liver fluke infection risk, measured as cumulative monthly proportion of wetlands used by moose, and decreased by 16% with each additional unit of nutritional energy available. The combination of flukes, coinfecting parasites, and available nutritional energy is important to calf survival in this population, highlighting the importance of managing multiple stressors for species conservation, although the effects are hard to disentangle given the high rates of survival observed. Identifying causes of mortality and mechanisms underlying increased mortality risk contributes to the continued conservation of moose in fluctuating populations and highlights the importance of managing parasite-induced disease.

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USGS2025

An evaluation of the effects of different deicing salt application rates on three watersheds in Essex County, New York

The U.S. Geological Survey, in cooperation with the New York State Department of Transportation, evaluated the effects of different deicing salt application rates on surface water, groundwater, and highway runoff quality near State highways in northern New York. Three reaches of State highways were tested with different deicing treatments between October 2019 and November 2022: a salt-sand mixture (Treatment A), a salt mixture applied at a lower rate (Treatment B), and a control mixture consistent with typical deicing salt amounts and application rates. Data on pavement conditions and the quality of surface water, highway runoff, and groundwater were collected. Surface electromagnetic data were also collected. Surface-water and groundwater quality downgradient from the State highways were compared with water quality at upgradient locations. The percentage of snow or ice coverage was used to evaluate the effectiveness of the salt applications. This report provides an overview of the transport of deicing salt. The Treatment B watershed had deicing mixture applied more frequently than other highway reaches, which caused it to have the highest annual total chloride application. Despite differences in chloride application, flow-weighted mean chloride concentrations in highway runoff were comparable across treatments. Chloride concentrations were elevated in surface water and groundwater downgradient from highways relative to chloride concentrations upgradient from highways. A chloride mass balance, calculated for one treatment watershed, indicated that groundwater affected by legacy deicing practices may be contributing additional chloride to surface water. Spatial patterns from electromagnetic surveys show a shallow saline plume alongside the highway in that area. Differences in winter severity and pavement-surface conditions drove deicing salt applications in the treatment areas. This study found that several factors affect chloride loads in the watersheds, including variable winter conditions, adaptive snow and ice management, legacy management practices, and area-specific aquifer and groundwater conditions.

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USGS2025

Cryptic life history diversity supports endangered species recovery in an ultra-urbanized landscape

Urban landscapes are often overlooked in conservation planning, allowing human activities to take precedence in ecosystem management. However, even heavily modified environments can support diverse species profiles, but continued expansion of the human footprint could transform these biodiversity hotspots into ecological traps that serve as hidden catalysts for demographic declines. In the backdrop of one of the world’s most urbanized landscapes-New York City, USA—is a federally endangered population of shortnose sturgeon ( Acipenser brevirostrum ) that has been quietly recovering for several decades despite many demographic threats. Here, we identify a unique behavioral phenotype of shortnose sturgeon that occupies habitats in New York Harbor in late spring and fall, likely using the area to optimize bioenergetic processes. As this study highlights, urbanized environments can be a nexus for cryptic phenotypic diversity which, if overlooked, can disrupt eco-evolutionary processes and contribute to population and species loss.

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USGS2025

How accurately does eDNA reflect the spatial distribution of cold-water fish? Field validation from a temperate lake

Applications of environmental DNA (eDNA) based detection technology to evaluate the distribution of aquatic organisms are increasing; yet field validations of eDNA are important to measure accuracy in study systems. To successfully apply this technology to species conservation, it is critical to understand how both species biology and environmental conditions affect the accuracy of inference from eDNA detection data. We implemented a field assessment of the accuracy and spatial resolution of eDNA-based species distributions for a native cold-water, schooling fish, cisco Coregonus artedi , that has been reintroduced to a deep temperate lake. We leveraged a combination of acoustic telemetry, providing known spatial locations of tagged fish, and lake-wide eDNA sampling to infer their distribution in Keuka Lake, New York, USA. Sub-surface (12 m and 18 m depths) eDNA samples were collected to accommodate the diel vertical migration behaviour of this fish species. The results of this study validated the accuracy of positive eDNA detections with the distribution of tagged fish to coarse spatial scales. Yet, several fine-scale locations revealed a mismatch between eDNA and acoustic telemetry detections; consistent with rapid transport of genetic material via lake currents. Empirical measurements of lake currents using drifters found cisco eDNA detections could deviate from specimens' source locations by as much as 3.3 km at 12 m depth or 1.5 km at 18 m depth over a 24 h transport period. Our study indicates that accurate species distributions estimated from eDNA sampling in lakes may require further understanding of transport mechanisms and persistence of environmental genetic material to relate point detections to source animal locations. Integrating eDNA sampling with additional data collection of species biology and environmental conditions will increase the spatial resolution of fish distribution assessments.

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USGS2025

Sounds of Atlantic sturgeon spawning: First description and opportunities for riverine endangered species conservation with passive acoustic monitoring

Effective recovery plans for endangered species rely on insights into species’ ecology to identify risks and develop population recovery strategies. Data gaps pose challenges for many species of conservation concern, particularly those with cryptic behaviors or that occupy difficult-to-access habitats. Sounds produced by these species offer an effective means of observing many such marine and aquatic species, and for this reason, passive acoustic monitoring has emerged as an important study and assessment approach in marine systems. This approach is only just beginning to be applied for aquatic species monitoring in freshwater habitats. Atlantic sturgeon Acipenser oxyrinchus , a species of conservation concern along the US East Coast, remains poorly understood due to persistent data gaps despite years of conservation efforts. While sounds have been described for other sturgeons, sounds from Atlantic sturgeon have not yet been reported. Here, we characterized acoustic cues associated with Atlantic sturgeon in the Hudson River, New York, USA, and identified a low-frequency (44 Hz peak frequency) signal strongly correlated with the occurrence of telemetry-tagged adults which enter the river to spawn. We corroborated these efforts with recordings of captive Atlantic sturgeon, in which we detected the same sound type during a spawning period. Our findings provide an opportunity to develop passive acoustic monitoring strategies for Atlantic sturgeon, offering a non-invasive tool for understanding the spatiotemporal distribution of spawning activity across their range. We demonstrate potential applications of passive acoustic monitoring to inform sturgeon conservation and management, including characterizing habitat use, identifying cross-species interactions, and providing abundance indices.

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USGS2025

Spatiotemporal variability of algal biomass and nitrate in Owasco and Seneca Lakes in the Finger Lakes Region, New York, in 2019

Cyanobacterial harmful algal blooms (CyanoHABs) have become increasingly common, threatening the security of water resources globally. The U.S. Geological Survey conducted high-resolution nearshore mapping surveys using boat-mounted multiparameter sondes and nitrate sensors during the summer and fall of 2019 on Owasco Lake and Seneca Lake, two lakes with documented CyanoHABs in the Finger Lakes region of New York State. Discrete sensor measurements and water-quality samples were collected at fixed points along survey routes and continuous data were generated at open-water monitoring platforms. This investigation examined whether water-quality information from nearshore surveys was representative of open-water conditions and if nearshore surveys could be used to identify areas with localized nearshore CyanoHABs and potential sources of nutrients not captured by tributary sampling. In addition to comparisons across methods, nearshore concentrations of nitrate and chlorophyll were evaluated relative to tributary outlets, cyanobacterial abundance and biovolume at discrete locations, and the locations of near-surface CyanoHABs that were designated as “confirmed with high toxins” by the New York State Department of Environmental Conservation. Nitrate and chlorophyll concentrations were comparable across methods for each lake, although concentration ranges were typically higher for nearshore mapping datasets than for nearshore discrete datasets. Nearshore surveys indicated areas of nitrate enrichment that varied temporally in both lakes. Orthophosphate was not routinely detected. Across methods, median chlorophyll concentrations were higher for the summer survey than for the fall survey in Owasco Lake. Nearshore chlorophyll concentrations varied more temporally in Owasco Lake than in Seneca Lake. Phytoplankton and cyanobacterial abundance and biovolume were about five times higher in Owasco Lake than in Seneca Lake. Cyanobacteria dominated the phytoplankton community in most samples, and Microcystis comprised the bulk of the cyanobacterial biovolume. The most abundant potential cyanotoxin-producing (specifically microcystins) genera were Microcystis , Synechococcus , Aphanocapsa , and Pseudanabaena . The cyanobacterial community composition was comparable between open-water monitoring platforms and nearshore samples. Microcystins were detected in seven survey samples from Owasco Lake, in one survey sample from Seneca Lake, and in one sample each from the open-water monitoring platforms on Owasco and Seneca Lakes that were collected about 7 days before the fall surveys. Microcystin detections were not consistently associated with high cyanobacterial cell counts or cyanotoxin-producing genera. Results from nearshore surveys were comparable to open-water monitoring platforms and discrete nearshore observations in the absence of nearshore or open-water CyanoHABs in these systems during the study. Patterns of nearshore concentrations of nitrate and chlorophyll from nearshore surveys may aid in the identification of areas with localized nitrate loading and shifts in phytoplankton abundance and community composition.

New York↗
USGS2025

Movement characterizations of stocked juvenile lake sturgeon (Acipenser fulvescens) within the Genesee River, NY

Knowledge of the movements of post-stocked juvenile lake sturgeon ( Acipenser fulvescens ) within and beyond the Genesee River of New York is limited. Describing lake sturgeon post-stocking movements could further the understanding of population structure and the delineation of nursery habitat. This project aimed to characterize the movements of juvenile sturgeon by tagging and tracking 69 age-0 + and 30 sub-adult lake sturgeon with acoustic transmitters from 2019 to 2021. Habitat use was disproportionate between the two life stages of juvenile sturgeon; age-0 + lake sturgeon primarily inhabited the upper reaches of the Genesee River, while sub-adults primarily utilized the lower dredged reaches of the Genesee River and the embayment outside of the river. A lower proportion of age-0 + lake sturgeon left the Genesee River relative to sub-adults, with seven sub-adult sturgeon (23.3 % of all tagged) moving to new habitats over 100 km away. Water temperature, discharge, and dissolved oxygen concentrations best predicted lake sturgeon movement within the river. These results indicate that the Genesee River is serving as a nursery habitat for juvenile lake sturgeon and that connectivity exists among the river, nearshore Lake Ontario habitats, and other tributaries. Such information is important when considering that management efforts for this species are commonly uniform across a system, while our results suggest a broader metapopulation framework may be relevant.

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