Geology topics

Research about Mississippi

Source-linked reports with geographic coverage including Mississippi.

At least 19 recordsLinked to original sources

USGS2026

Trends and seasonal patterns of nitrogen and phosphorus concentrations and loads in two Mississippi Alluvial Plain watersheds following nutrient reduction efforts during 2010–22

The Mississippi Alluvial Plain ecoregion in Mississippi was historically part of the largest continuous wetland in North America but was clearcut and converted to row crop agriculture beginning in the late 1800s. To reduce the effects of agriculture on surface waters in the Mississippi Alluvial Plain, nutrient reduction best management practices have been implemented throughout the region, particularly in two small watersheds: Harris Bayou watershed (174.04 square kilometers) and Porter Bayou watershed (267.15 square kilometers). Since 2009, the U.S. Geological Survey, in cooperation with the Mississippi Department of Environmental Quality, has collected water-quality samples monthly and during high-flow runoff events, at three locations within each watershed to monitor and assess nutrient trends following best management practice implementation. Here, we have analyzed long-term and seasonal trends in discharge, total nitrogen (TN), and total phosphorus (TP) concentrations and loads using a combination of quantile-Kendall analysis, quantile regression, generalized additive models, and weighted regression on time, discharge, and season. In Harris Bayou watershed, discharge values at a ~0.4–0.5 daily nonexceedance probability increased by 15 percent per year at the uppermost monitoring site. Additionally, TN concentrations decreased throughout the watershed over time, particularly in the spring and winter months. Reductions in TP were less apparent and only observed at one sampling location in Harris Bayou watershed. Nutrient concentrations in Porter Bayou watershed remained consistent over time and increased at one sampling location. However, despite discrepancies in concentration trends, flow-normalized TN and TP loads consistently decreased over time in both watersheds. At the mouth of both watersheds, peak TN and TP loads decreased between 37.7 and 56.9 percent. Collectively, these results provide evidence that best management practices may help reduce the effect of agricultural practices in the region, particularly in Harris Bayou watershed. Additionally, management efforts resulted in greater reductions in TN concentrations than in TP concentrations.

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USGS2026

3D Elevation Program—Mississippi

Using 3D Elevation Program data, a modern illustration of each State's landscape showcases its elevation differences in vivid detail. Each State has been consistently adjusted and colorized according to its highest and lowest elevations, accentuating differences even in States with low relief. To further emphasize landforms, shaded relief has been added on top of the elevation colors.

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USGS2026

Mississippi’s resiliency and changing environmental conditions

Mississippi is experiencing shifts in environmental conditions, many of which are expected to intensify in the coming decades, and will have important implications for ecosystems, species, and natural resource management across the state. Historical climate analyses and downscaled projections summarized for the state’s Environmental Protection Agency (EPA) level III Ecoregions show that Mississippi will likely face increases in extremely hot days, more intense heatwaves, greater evapotranspiration, and reductions in cold-season extremes. Temperature trends indicate that while Mississippi has warmed relatively little over the last century, recent years have been among the warmest on record. Projections suggest substantial increases in the number of days with maximum temperatures at or above 95°F across all Ecoregions, particularly under higher warming scenarios. Correspondingly, the number of freezing nights is expected to decline, with statewide decreases of 7–21 days depending on the global warming level and timeframe. These combined patterns are likely to reshape habitat conditions, influence species’ thermal stress, and alter ecological processes such as soil moisture retention and stream temperature regimes. Mississippi’s hydrological systems are also expected to be significantly affected. Extreme rainfall events, particularly the most intense 1% of precipitation days, are projected to increase across the state, raising risks of flooding, erosion, and altered stream flow. Coastal Mississippi faces additional stress from sea‑level rise, which is already contributing to more frequent high‑tide flooding; projections show continued increases in inundation risk throughout the century. These flooding patterns, combined with stronger hurricane rainfall rates and the potential for landfalling storms to stall, pose ongoing threats to coastal ecosystems and communities. The state is also vulnerable to extreme weather hazards such as tornadoes. Recent research shows a geographic shift in tornado activity toward the Southeast, with Mississippi experiencing some of the nation’s greatest increases in favorable tornado days and nighttime tornado frequency—hazards that have direct implications for wildlife, habitat stability, and human safety. Drought conditions may intensify as well: higher temperatures and increased evapotranspiration during dry spells could worsen water stress regardless of uncertainty in average annual precipitation. These changing environmental conditions have important consequences for Mississippi’s Species of Greatest Conservation Need (SGCN). Vulnerability assessments and ecological niche models indicate that several fish, mussel, crayfish, plant, amphibian, bird, and mammal species may face heightened stress due to warming temperatures, shifting hydrology, habitat loss, and increases in extreme events. For example, many cold‑water and moisture‑dependent species in the state’s rivers and wetlands are already near their thermal limits, and further warming could reduce suitable habitat. Birds breeding in bottomland hardwood forests, such as the Prothonotary Warbler, are increasingly susceptible to nest loss from flooding. Similarly, species like the Louisiana Black Bear may encounter higher risks from habitat inundation and shifting food availability. The “A Closer Look” section underscores the vulnerability of the Mississippi Alluvial Plain—one of the state’s most ecologically rich yet heavily altered Ecoregions. Its bottomland hardwood forests, wetlands, and floodplain habitats support diverse wildlife but are increasingly threatened by rising temperatures, hydrological changes, development pressures, and compounded disturbances. These habitats provide critical ecosystem services such as water filtration, flood attenuation, and biodiversity support, making their conservation particularly urgent under future conditions. Collectively, these findings indicate that Mississippi’s ongoing and projected environmental changes present both challenges and opportunities for natural resource management. Incorporating adaptation strategies into the State Wildlife Action Plan will be essential for sustaining habitats, mitigating risks, and supporting the long‑term resilience of Mississippi’s wildlife and ecosystems.

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USGS2025

Long‐term effects of low‐drop grade control structures on channel evolution in the Yazoo River Basin

Channel incision is a widespread problem, especially in river basins that have an extensive history of channel alterations. Because channel incision causes large ecological and economic consequences, the prevention of continued migration of headcuts, defined as a steep change in stream gradient over a short reach, has been the focus of many stream engineering projects. Low-drop grade control structures (GCS) are a type of structure installed to halt the upstream movement of a headcut and were widely installed in the rivers and streams of the Yazoo River Basin in northern Mississippi. The goal of this study was to evaluate the long-term effects of these structures 30+ years post installation. To assess GCS effects on channel morphology, stream cross-section surveys were used to calculate Bank Height Ratio, Width-to-Depth Ratio, and Entrenchment Ratio, while point estimates made along each transect were used to calculate the average sediment size distribution for each of 30 sites. Analyses revealed that the GCS were successful in checking channel incision moving headward in the streams: sites upstream of the GCS were less incised and had greater accumulations of fine substrates compared to sites downstream and sites on streams lacking erosion control structures. Given the widespread use of GCS, these results can inform efforts aimed at managing channel incision.

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USGS2025

An inset groundwater-flow model to evaluate the effects of layering configuration on model calibration and assess managed aquifer recharge near Shellmound, Mississippi

The U.S. Geological Survey has developed a high-resolution inset groundwater-flow model in the Mississippi Delta as part of an interdisciplinary collaboration coordinated by the Mississippi Alluvial Plain project to provide a tool that stakeholders can use to support water-resource management decisions. Groundwater withdrawals from the Mississippi River Valley alluvial (MRVA) aquifer have been vital to support agricultural production in the region, but substantial groundwater-level declines near Shellmound, Mississippi, have caused concerns for long-term sustainability of the aquifer. To better understand the subsurface and try to mitigate the long-term groundwater-level declines, stakeholders have undertaken actions including a Groundwater Transfer and Injection Pilot (GTIP) project using a riverbank filtration-based managed aquifer recharge approach. The pilot project consisted of extracting groundwater near the Tallahatchie River and reinjecting it into the aquifer 3 kilometers west where water levels have substantially declined. A high-resolution airborne electromagnetic (AEM) survey was also completed to collect electrical resistivity data to support the GTIP project and the development of the groundwater model. The inset groundwater-flow model was developed to (1) integrate the AEM data into the optimal layering configuration of the MRVA aquifer that the available observation data can support through calibration, and (2) assess the potential effect of the GTIP project on the groundwater levels. The AEM data were processed into three different layering configurations leading to the development of model A (18 layers), model B (16 layers), and model C (8 layers), all at a 100- x 100-meter cell spatial resolution using the U.S. Geological Survey modular finite-difference flow model 6 code with Newton-Raphson formulation. The model development process integrated recent advances in modeling, such as the incorporation of AEM data, the use of outputs from the soil-water-balance (SWB) model, and the Aquaculture and Irrigation Water-Use Model, and was facilitated by robust automation using the open-source python packages Modflow-setup and SFRmaker. Using Parameter Estimation ++ Iterative Ensemble Smoother, the three numerical groundwater-flow models (models A, B, and C) were calibrated against a set of observations, which included aquifer groundwater levels, streamflows, stream stage, and aquifer transmissivity. Results indicate that the detailed representation of MRVA aquifer layers in model A produced the best calibrated model by history matching, and the integration of data representing surficial connectivity played a key role in improving groundwater recharge and enhancing the ability of the model to match groundwater levels in the cone of depression. A forecast model simulated the managed aquifer recharge approach, and the results indicated that, given average irrigation and recharge conditions (2010–15), the GTIP project has the potential to induce groundwater-level increases of as much as 3 meters around the injection site, but a sustained increase would require repetition in subsequent years of water transfer at 2022 rates or above.

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USGS2025

Evaluating the influence of constructed subtidal reefs on marsh shoreline erosion, sediment deposition, and wave energy

Salt marshes play a critical role in providing economic and ecological benefits but are susceptible to shoreline erosion. Natural and nature-based features (NNBF), such as breakwater reefs, are often used to reduce shoreline exposure to wave action and provide biogenic benefits. However, waves and water level are also responsible for the sediment supply necessary for marsh accretion, a critical component of marsh resilience to sea level rise. The goal of this study was to evaluate the effects of two subtidal breakwater reefs on wave energy, marsh shoreline erosion, and sediment deposition onto the marsh platform. As a restoration intervention, oyster shell and limestone gravel reefs were constructed within the nearshore zone of a high-energy shoreline where active shoreline erosion is causing marsh habitat loss. Although both sediment deposition and shoreline erosion were reduced after reef installation at all sites, the reefs demonstrated a statistically significant reduction in sediment deposition, whereas its effect on decreasing shoreline erosion was less pronounced. This variability in erosion reduction may be partly influenced by the physical dimensions of the reefs, affecting wave attenuation and leeward circulation. Wave measurements indicate that the reef reduced wave energy, particularly during south and southeast winds that could lead to the largest onshore waves. Given that these strong onshore winds are seasonal, extending the duration of data collection could provide deeper insights into the reef's influence on marsh shoreline erosion. This study is novel in that there are limited experimental or observational studies quantifying the wave reduction capacity and effects of subtidal reefs on marsh shoreline erosion and sediment dynamics. Studies such as these are critical to evaluate the capacity of subtidal reefs to protect marsh shorelines from erosion, but also to measure their impact on accretion processes necessary for the marsh to maintain elevation under future sea level rise.

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USGS2025

A review of standardization in Mississippi’s multidecadal inland fisheries monitoring program

Standardizing data collection, management, and analysis processes can improve the reliability and efficiency of fisheries monitoring programs, yet few studies have examined the operationalization of these tasks within agency settings. We reviewed the Mississippi Department of Wildlife, Fisheries, and Parks, Fisheries Bureau’s inland recreational fisheries monitoring program—a 30+-year effort to standardize field protocols, data handling procedures, and automated analyses through a custom-built computer application, the Fisheries Resources Analysis System (FRAS). Drawing on quantitative summaries of sampling trends and qualitative interviews with fisheries managers, we identified key benefits, challenges, and opportunities associated with the Bureau’s standardization efforts. Standardized procedures improved sampling consistency, data reliability, and operational efficiency, enabling the long-term tracking of fish population and angler metrics across more than 270 managed waterbodies. However, challenges related to analytical transparency and spatiotemporal comparisons persist. Simulations indicated that under current conditions, 5.8, 22.9, and 37.1 years would be required to sample (boat electrofishing) 50%, 75%, and 95% of the Bureau’s waterbodies at least once, respectively; these figures should translate to other agencies, assuming similar resource availability per waterbody. The monitoring program has reduced manual processing effort and enhanced staff capacity for waterbody-specific management, yet several opportunities remain to improve efficiency and utility. These include expanding FRAS functionalities for trend visualization, integrating mobile field data entry to reduce transcription errors, linking monitoring results with management objectives, and enhancing automated report generation for management support. Strengthening these elements could not only streamline workflows but better position agencies to apply standardized data in adaptive management embedded into the monitoring program.

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USGS2025

From subsidies to stressors: Shifting ecological baselines alter biological responses to nutrients in highly modified agricultural streams

Subsidy–stress gradients offer a useful framework for understanding ecological responses to perturbation and may help inform ecological metrics in highly modified systems. Historic, region-wide shifts from bottomland hardwood forest to row crop agriculture can cause positively skewed impact gradients in alluvial plain ecoregions, resulting in tolerant organisms that typically exhibit a subsidy response (increased abundance in response to environmental stressors) shifting to a stress response (declining abundance at higher concentrations). As a result, observed biological tolerance in modified ecosystems may differ from less modified regions, creating significant challenges for detecting biological responses to restoration efforts. Using the agriculturally dominated Mississippi Alluvial Plain (MAP) ecoregion in Mississippi, USA, as a case study, we tested the hypothesis that macroinvertebrate taxa that typically display a subsidy response to nutrient enrichment in less modified ecoregions (i.e., nutrient-tolerance) shift to a stress response to increasing nutrients in highly modified watersheds with elevated baseline nutrient conditions (i.e., nutrient intolerance). The abundance and diversity of MAP-specific intolerant taxa identified with threshold indicator taxa analysis were either unresponsive or exhibited a subsidy response to increasing nutrients in less modified ecoregions in Mississippi with less land alteration and lower nutrient concentrations, but declined at higher concentrations, providing evidence for a stress response to elevated nutrients in the MAP. Additionally, MAP-specific tolerant and intolerant taxa richness responded to increased nutrients predictably and consistently across space and time within the MAP. However, in MAP streams, elevated specific conductance was predicted to dampen the response of tolerant and intolerant taxa richness to increasing nutrient concentrations, highlighting the importance of considering multistressor interactions when interpreting biological data. Lastly, we demonstrate the efficacy of this approach with sediment bacterial communities characterized with amplicon sequencing, which lack sufficient life history characteristics necessary for the development of multimetric indices. Both macroinvertebrate and bacterial communities responded similarly to increasing nutrient concentrations, suggesting DNA-based approaches may provide an efficient biological assessment tool for monitoring water quality improvements in highly modified watersheds.

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USGS2025

Multi-lithofacies alluvial characterization via airborne electromagnetic-borehole fusion using ordinary interval kriging and geologic constraints

Airborne electromagnetic (AEM) survey provides extensive spatial coverage and detailed resolution at the near surface and can be used to develop hydrogeological models. However, utilization of AEM data is not straightforward because AEM resistivity is an indirect measurement for inferring sediment types. This study develops an ordinary interval kriging (OIK) algorithm and a resistivity-to-multi-lithofacies (R2ML) data fusion workflow for multi-lithofacies alluvial characterization. OIK utilizes irregular interval data to construct three-dimensional (3D) resistivity fields from one-dimensional inverted AEM resistivity models. The R2ML workflow maps the resistivity field generated from OIK into a multi-facies lithological model, incorporating geologic constraints derived from well logs and geological observations. The numerical and real-world cases demonstrate that OIK is computationally efficient, accounts for 3D anisotropy, and minimizes the smoothing effect, thereby preserving resistivity contrasts and reducing interpolation uncertainty. The methodology is applied to lithologic characterization of the Mississippi River Valley alluvial aquifer (MRVA) in the Shellmound area, Mississippi, U.S. A frequency-domain AEM survey was conducted to support groundwater studies for the managed aquifer recharge (MAR) to the MRVA. The resulting lithological model, including four types of lithofacies—clay, very fine sand, fine-medium sands, and graveliferous sands, illustrates the geomorphological processes of the MRVA and implies potential MAR. The alignment between the lithological model and existing geological and hydrogeological investigations demonstrates that OIK and R2ML workflow effectively capture the subsurface architecture of the MRVA. The methods have broad applicability for characterizing alluvial aquifers through AEM-borehole data fusion, supporting sustainable groundwater management.

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USGS2024

Hypothetical CO2 leakage into, and hydrological plume management within, an underground source of drinking water at a proposed CO2 storage facility, Kemper County, Mississippi, USA

A large Geologic Carbon Sequestration (GCS) hub has been proposed in Kemper County, Mississippi. The target injection interval consists of numerous Cretaceous-aged deep saline aquifers overlain by a competent and extensive regional sealing layer. Above the seal, the deepest Underground Source of Drinking Water (USDW) at the site is the Eutaw aquifer of the Eutaw Group and McShan Formation, undifferentiated. To assess potential risks of leakage from the deep sequestration reservoir, a model of a portion of the Cretaceous Eutaw Group was constructed in this study. Simulations tested various permeabilities, hypothetical leakage rates, and plume mitigation strategies utilizing existing wells. Results suggest that, under the influence of regional groundwater flow fields, leaking CO 2 would effectively bypass the existing wells, and to influence this migration would require very large water extraction rates. Therefore, to ensure plume detection, monitoring for leakage at the injection wells themselves is very important.

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USGS2024

The 3D Elevation Program—Supporting Mississippi's economy

Introduction Mississippi has a dispersed population of nearly three million residents in an area of approximately 48,400 square miles and has a favorable climate for agriculture, with abundant precipitation and minimal extreme temperatures. The topography consists mostly of low hills and lowland plains, with the highest elevation about 800 feet above sea level. An exception is the nearly flat Mississippi Alluvial Plain, or “Delta,” in the northwestern part of the State. Agriculture and forestry are Mississippi’s major industries. With 65 percent of its area forested, the State is one of the country’s top producers of lumber and wood-related products. In addition to agriculture and forest resources management, other important economic activities are infrastructure and construction management, flood risk management, and water supply and quality assessment. High-quality elevation data can help to support these activities. Critical applications that meet the State’s management needs depend on light detection and ranging (lidar) data that provide a highly detailed three-dimensional (3D) model of the Earth’s surface and aboveground features.

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USGS2024

Sedimentary processes and instability on the Mississippi River Delta Front near the shipwreck of the SS Virginia

Sediment cores were collected from a mudflow lobe (80 m water depth) offshore of the Mississippi River’s Southwest Pass in 2017 to better understand the sedimentology near the lobe entraining the SS Virginia shipwreck (sunk by a German U-boat in 1942) and surrounding Mississippi River delta front. Core analyses included 210 Pb/ 137 Cs geochronology, granulometry, and X-radiography. Sediment accumulation rates (SAR) calculated from excess 210 Pb activity in multicores are 0.22–0.29 cm/y at seabed depths less than 20 cm and 0.29–0.51 cm/y at depths greater than 20 cm. Accumulation rates for 137 Cs have been ~0.15 to ~0.37 cm/y since 1954 and 1963, respectively. Sediment accumulation rates from 210 Pb, 137 Cs geochronology and indicators of relative sedimentation and bioturbation from X-radiographs suggest that rates of sediment accumulation near the Virginia have declined since the mid-20th century. This may be explained by the multi-decade downslope mass transport of the mudflow lobe in which the shipwreck is embedded and decreases in sediment supply delivered offshore from the Mississippi river. Mass transport calculations of the Virginia lobe derived from core properties and published lobe advection rates suggest downslope mass transport is far higher than sediment resupply from the Mississippi river, consistent with recent studies of delta retreat.

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USGS2024

Identifying and constraining marsh-type transitions in response to increasing erosion over the past century

Marsh environments, characterized by their flora and fauna, change laterally in response to shoreline erosion, water levels and inundation, and anthropogenic activities. The Grand Bay coastal system (USA) has undergone multiple large-scale geomorphic and hydrologic changes resulting in altered sediment supply, depositional patterns, and degraded barrier islands, leaving wetland salt marshes vulnerable to increased wave activity. Two shore-perpendicular transect sites, one along a low-activity shoreline and the other in a high activity area of the same bay-marsh complex, were sampled to investigate how the marshes within 50 m of the modern shoreline have responded to different levels of increased wave activity over the past century. Surface sediments graded finer and more organic with increased distance from the shoreline while cores generally exhibited a coarsening upwards grain-size trend; all cores contained multiple large sedimentological shifts. 210 Pb-based mass accumulation rates over the last two decades were greater than the long-term (centurial) average at each site with the fastest accumulation rates of 7.81 ± 1.58 and 7.79 ± 1.63 kg/m 2 /year at the sites nearest the shoreline. A shoreline change analysis of three time-slices (1848–2017, 1957–2017, 2016–2017) shows increased erosion at both sites since 1848 with modern rates of −0.95 and −0.88 m/year. Downcore sedimentology, mass accumulation rates, and shoreline change rates paired with foraminiferal biofacies and identification of local estuarine indicator species, Paratrochammina simplissima , aided in identifying paleo marsh types, their relative proximity to the shoreline, and sediment provenance. The high-energy marsh site transitioned from middle marsh to low marsh in the 1960s, and the low-energy marsh site transitioned later, at the end of the twentieth and early twenty-first century, due to its more protected location. Marsh type transition corresponds chronologically with the coarsening upwards grain-size trend observed and the degradation of Grand Batture Island; since its submergence, signatures of multiple storm event have been preserved downcore.

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USGS2024

Comparison of measured versus modeled TOC in the Tuscaloosa marine shale of Southwestern Mississippi, U.S.A.

This study presents a comparison of measured versus modeled total organic carbon (TOC) in the Upper Cretaceous Tuscaloosa marine shale (TMS) of southwestern Mississippi as a case study to evaluate the effects of mineralogy on the TOC estimated from the ΔlogR method. The ΔlogR method is utilized to calculate TOC, which involves baselining sonic transit time and resistivity log curves in a non-source rock section of the formation. In our application, the well log curves were baselined in the upper TMS, which is described as a non-source rock section, and in the lower TMS above the high resistivity zone (HRZ), which is described as having a higher carbonate content. The ΔlogR calculated TOC values from these two baselining approaches show that the lower baseline results in improved agreement between measured TOC and calculated TOC. This improvement is likely to be due to the lower baseline accounting for the increase in resistivity caused by higher carbonate content, in addition to any presence of TOC. The upper baseline, which has a lower carbonate content, does not account for this resistivity increase. Additionally, sample type appears to affect the comparison of measured and ΔlogR calculated TOC. Most of the samples used in this study are legacy cuttings that were not preserved during storage, exposing the high surface area cuttings to increased rates of oxidation, whereas geophysical logs record the rock properties in situ. To account for this oxidation effect, the difference between the medians of the TMS HRZ TOC core and cuttings values was added to each TOC measurement in this study, resulting in a median measured TOC value that is similar to the median of the lower TMS-baselined ΔlogR calculated TOC value. Overall, this study demonstrates that carbonate content and sample type can affect how well measured and ΔlogR-modeled TOC values compare.

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USGS2024

Spatial distribution patterns of invasive silver carp can inform removal efforts in an oxbow lake of the Mississippi River

Oxbow lakes are highly productive waterbodies that host multiple life stages of many freshwater aquatic species. These lakes also provide foraging and rearing habitat to the invasive silver carp ( Hypophthalmichthys molitrix ) enabling populations to grow in biomass and abundance that can add propagule pressure to connected waterways and oxbows within the Mississippi River Basin. Ecologically these fish are undesirable because they overlap in diet and may compete for resources with native fishes and negatively impact recreational fisheries. Our goal was to evaluate silver carp distribution patterns in a major Mississippi River oxbow lake to inform removal programs and precision harvesting. We implanted 35 adult silver carp with acoustic tags and released them into the lake. Periodic tracking over 365 d revealed that fish were predominantly found in lake areas with water depths ranging from 2.0 to 5.9 m during all seasons, despite the availability of shallower and deeper water. Silver carp tended to aggregate in the wintertime (December–February) relative to other seasons. This information about lake area uses and seasonal aggregations could inform removal efforts in invaded waterbodies by exploiting natural behavioral and temporal vulnerabilities of this highly invasive and difficult-to-capture fish.

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USGS2023

Salinization and sedimentation drive contrasting assembly mechanisms of planktonic and sediment-bound bacterial communities in agricultural streams

Agriculture is the most dominant land use globally and is projected to increase in the future to support a growing human population but also threatens ecosystem structure and services. Bacteria mediate numerous biogeochemical pathways within ecosystems. Therefore, identifying linkages between stressors associated with agricultural land use and responses of bacterial diversity is an important step in understanding and improving resource management. Here, we use the Mississippi Alluvial Plain (MAP) ecoregion, a highly modified agroecosystem, as a case study to better understand agriculturally associated drivers of stream bacterial diversity and assembly mechanisms. In the MAP, we found that planktonic bacterial communities were strongly influenced by salinity. Tolerant taxa increased with increasing ion concentrations, likely driving homogenous selection which accounted for ~90% of assembly processes. Sediment bacterial phylogenetic diversity increased with increasing agricultural land use and was influenced by sediment particle size, with assembly mechanisms shifting from homogenous to variable selection as differences in median particle size increased. Within individual streams, sediment heterogeneity was correlated with bacterial diversity and a subsidy-stress relationship along the particle size gradient was observed. Planktonic and sediment communities within the same stream also diverged as sediment particle size decreased. Nutrients including carbon, nitrogen, and phosphorus, which tend to be elevated in agroecosystems, were also associated with detectable shifts in bacterial community structure. Collectively, our results establish that two understudied variables, salinity and sediment texture, are the primary drivers of bacterial diversity within the studied agroecosystem, whereas nutrients are secondary drivers. Although numerous macrobiological communities respond negatively, we observed increasing bacterial diversity in response to agricultural stressors including salinization and sedimentation. Elevated taxonomic and phylogenetic bacterial diversity likely increases the probability of detecting community responses to stressors. Thus, bacteria community responses may be more reliable for establishing water quality goals within highly modified agroecosystems that have experienced shifting baselines.

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USGS2023

Impact of dams on stream fish diversity: A different result

Impoundments can drastically change the physical and biological characteristics of fluvial systems. Changes in the physical characteristics, such as reductions in flow, increased sediment deposition, and increased surface area, often influence the system’s biological components, including plant, macroinvertebrate, and fish assemblages. In addition to having direct effects on impounded waterbodies, impoundments can also have wide-ranging effects at the watershed scale, particularly on upstream tributary streams. The purpose of this study was to assess the magnitude of these effects. We analyzed historical data from 26 streams distributed across five sub-basins in the Bluff Hills region of the Yazoo Basin, MS, USA. All five major tributary rivers in this region are impounded by large (11,240–26,143 hectares) reservoirs for flood control. We compared fish assemblages in streams located upstream and downstream of the four reservoirs using PERMANOVA, and contrary to expectations, we found no significant differences between the upstream and downstream assemblages. We explore several possible explanations for this discrepancy and suggest that stream assemblage response to impoundment may be nuanced by the regional species pool, the history of stream conditions in the watershed, and the resistance of the streams to periodic disturbances.

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USGS2023

Status and trends of total nitrogen and total phosphorus concentrations, loads, and yields in streams of Mississippi, water years 2008–18

To assess the status and trends of conditions of surface waters throughout Mississippi, the U.S. Geological Survey, in cooperation with the Mississippi Department of Environmental Quality (MDEQ), summarized concentrations and estimated loads, yields, trends, and spatial and temporal patterns of total nitrogen (TN) and total phosphorus (TP) at 20 stream sites in MDEQ’s ambient water-quality monitoring network and 2 stream sites in the U.S. Geological Survey’s National Water-Quality Assessment Project’s monitoring network. Comparison of streamflow at the time of water-quality sample collection to flow-duration curves for each site showed that samples were relatively evenly spread over a wide range of flows, indicating that load estimations were representative of a wide range of flows. Relation of streamflow to concentrations of TN and TP varied among sites and land use. Sites with high agriculture land use in the drainage basin tended to have a positive correlation between streamflow and concentration, suggesting influence of event-driven nonpoint-source runoff. Sites near urban (developed) areas tended to have a negative correlation between streamflow and concentration, suggesting chronic point-source influences during low-flow conditions. Sites with high forest land use and lower agriculture and urban (developed) land use showed little to no association between streamflow and concentration. Seasonal distributions of concentrations of TN and TP also corresponded closely with variations in land use. Sites near urban (developed) land had the highest concentrations in late summer and fall, sites with a high percentage of agricultural land had the highest concentrations in the spring, and sites that were primarily forested or with little developed land did not exhibit substantial changes in concentration across seasons. Eight sites had statistical likelihoods for upward trends of TN loads, and seven sites had statistical likelihoods for downward trends. Trends in TN loads at six sites were considered “about as likely as not,” meaning that a site has an equal chance of having an upward or downward trend. Trend results of mean annual flow-normalized loads of TP for the period of analysis (2008–18) showed that 16 sites had upward trends, 3 sites had downward trends, and 2 sites were considered “about as likely as not.” Results from our study were compared to results from existing regional models to assess accuracy of predictions at a local scale. Comparisons of yields predicted from 2012 regional-scale SPAtially Referenced Regressions on Watershed attributes (SPARROW) to results from this study showed the 2012 SPARROW-predicted estimates varied in consistency with results from this study. The 2012 SPARROW-prediction model underestimated TN yields, more often and by a slightly larger degree, more than it overestimated TN yields. The 2012 SPARROW-predicted model tended to underestimate yields at study sites with higher yields. All four sites in the predominantly agricultural area of northwest Mississippi, locally known as the Mississippi Delta, were underestimated by 2012 SPARROW. For TP, yield comparisons at sites with lower yields were consistent, yields at sites with midrange yields tended to be overestimated by SPARROW, and yields at sites with high yields tended to be underestimated by SPARROW. TP yields at four sites in the Mississippi Delta were underestimated by the 2012 SPARROW-predicted model. Results of select sites from our study were also compared to other published load estimates from an earlier time period to evaluate possible trends. Comparison of TN yields at four sites and TP yields at three sites from the study-derived estimates to estimates made from data spanning 1993–2004 showed decreasing TN yields at all four sites and decreasing TP yields at two of three sites, with increasing yields of TP at the Yazoo River lower site. Also, a third comparison of the TN and TP yields of the Yazoo River lower site of this study to estimates made from data spanning 1996–97 showed decreasing TN yields but similar TP yields. This suggests that TN yields may have decreased over the last 20–30 years, but TP yields remain constant or are increasing.

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