Geology topics

Research about Idaho

Source-linked reports with geographic coverage including Idaho.

At least 145 records · Page 8Linked to original sources

USGS2021

Sediment transport in the Yankee Fork of the Salmon River near Stanley, Idaho, water years 2012–19

Placer and dredging operations in the Yankee Fork Basin, Idaho, have left more than 5 miles of the lower Yankee Fork of the Salmon River (Yankee Fork) in a highly altered fluvial condition, resulting in poor habitat quantity and quality for native fish species. Since 2011, the Bureau of Reclamation and other stakeholders have implemented a series of restoration efforts to improve the connectivity of the river with its floodplain and to improve aquatic and terrestrial habitat in the Yankee Fork. In conjunction with these rehabilitation efforts, the U.S. Geological Survey monitored streamflow and suspended-sediment and bedload transport during water years 2012–19 at four sites in the affected lower reach of the Yankee Fork. The objectives of the monitoring were to (1) identify source areas of sediment, (2) quantify sediment transport in the lower Yankee Fork, and (3) provide a benchmark to evaluate the effects of rehabilitation efforts in the basin. During the 8 years of sampling, the annual flow-weighted suspended-sediment concentrations (SSCs) were largest at the most downstream Clayton site, ranging from a low of 11 milligrams per liter (mg/L) in 2015 to 145 mg/L in 2017. The Clayton site also had the largest flow-weighted concentrations of suspended sand and suspended fines. At relatively low streamflow, the fine-grained fraction of the suspended sediment was the dominant component of the SSC at all sites, with an increase in the sand-size fraction as streamflow increased during snowmelt runoff. Each of the three main-stem Yankee Fork sites indicated a large amount of hysteresis in SSCs during snowmelt runoff, with concentrations on the rising limb of the hydrograph larger than concentrations on the falling limb at similar streamflow. Hysteresis was particularly evident in the fine-grained fraction of suspended sediment, indicating that sediment transport in the lower Yankee Fork is more limited by the supply of fine-grained sediment as compared to coarser-grained sediment.

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USGS2021

Characterization of water resources in the Big Lost River Basin, south-central Idaho

Water resources in the Big Lost River Basin, Idaho are vital to irrigated agriculture, domestic, municipal and other uses but declining groundwater levels, diminished streamflows, and concern about drought motivated an evaluation of water resources in the basin. This multichapter volume documents the findings of a hydrogeologic investigation of the Big Lost River Basin that was jointly conducted by the U.S. Geological Survey, Idaho Department of Water Resources, and Idaho Geological Survey from 2018 through 2021. Chapter A (Zinsser, 2021) describes the hydrogeologic framework of the Big Lost River Basin. The framework presents a conceptual definition of four hydrogeologic units, a three-dimensional hydrogeologic framework model representing the spatial occurrence of the hydrogeologic units, and a description of groundwater occurrence and movement. Chapter B (Dudunake and Zinsser, 2021) describes streamflow gains from and losses to groundwater in the Big Lost River between Mackay Reservoir and south of Arco. Streamflow losses and gains were estimated from a series of four measurement events completed during spring and fall conditions from 2019 to 2021. Chapter C (Clark, 2022) describes budgets for the Big Lost River Basin from 2000 to 2019. The groundwater budgets provide annual estimates for aquifer inflows and outflows and include representations of average, wet, and dry conditions. Collectively, these reports present a characterization of water resources in the Big Lost River Basin that will help address current challenges in water-resources management.

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USGS2021

Surface-water and groundwater interactions in the Big Lost River, south-central Idaho

The Big Lost River of south-central Idaho interacts with the underlying aquifer by gaining and losing streamflow throughout various areas in the Big Lost River Valley. Surface-water and groundwater resources are used throughout the valley to sustain domestic, agricultural, and livestock needs. The U.S. Geological Survey, in cooperation with the Idaho Department of Water Resources, evaluated streamflow gains and losses by differential streamgaging in the lower Big Lost River, Idaho, during four measurement events: March 27–28, 2019; October 16–17, 2019; October 6–7, 2020; and March 30, 2021. This report presents and analyzes streamflow measurement and uncertainty data from each measurement event to describe surface-water/groundwater interactions. This report is the second chapter of a multi-chapter volume that characterizes water resources in the Big Lost River Basin. During the four measurement events, 100 streamflow measurements were made at 46 unique sites on the Big Lost River, James Creek, and diversions or tributaries between Mackay Reservoir near Mackay and Arco, Idaho. Aquifer lithology and dimensions affected spatial patterns of streamflow gains and losses between the upper, middle, and lower reaches; changes in water supply, groundwater levels, and surface-water management affected seasonal differences within reaches. In the upper reach of the Big Lost River, streamflow losses and gains were greater during the wetter 2019 events and lesser during the drier 2020 and 2021 events. The middle reach includes the largest losses from the Big Lost River to groundwater; these losses occurred in the Darlington Sinks where 42 percent or more of streamflow was lost as the aquifer widens and groundwater deepens. These results suggest that changing surface-water supply, irrigation use, and recharge affect interannual groundwater levels and, in turn, affect patterns of streamflow gains and losses in the middle reach. Finally, surface-water management is the primary control on surface-water/groundwater interactions in the lower reach. Overall patterns of streamflow gains and losses in this study generally were consistent with previous reports. However, paired with the related hydrogeologic framework and water budget, this investigation provides new insights into how hydrogeologic conditions and interannual variability in water supply, groundwater levels, and surface-water management affect surface-water/groundwater interactions in the Big Lost River Valley.

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USGS2021

Hydrogeologic framework of the Big Lost River Basin, south-central Idaho, chap. A of Zinsser, L.M., ed., Characterization of water resources in the Big Lost River Basin, south-central Idaho

Surface-water and groundwater resources in the Big Lost River Basin of south-central Idaho are extensively interconnected; this interchange affects and is affected by water-resource management for irrigated agriculture and other uses in the basin. Concerns from water users regarding declining groundwater levels, declining streamflows, and drought helped motivate an updated evaluation of water resources in the Big Lost River Basin. The hydrogeologic framework presented in this report provides a conceptual basis for understanding groundwater resources in the Big Lost River Basin and comprises three major parts: (1) conceptual description of four hydrogeologic units, (2) development of a three-dimensional hydrogeologic framework model representing the spatial distribution of the hydrogeologic units, and (3) a description of groundwater occurrence and movement. This hydrogeologic framework represents the first of three planned reports describing water resources in the Big Lost River Basin; subsequent reports are intended to present a groundwater budget for the basin and to describe the results of a series of events measuring gains to and losses from streamflow in the Big Lost River. This report was prepared by the U.S. Geological Survey in cooperation with the Idaho Department of Water Resources. The Big Lost River Basin has four hydrogeologic units. First, the Quaternary unconsolidated sediments unit comprises the basin-fill alluvial aquifer and generally is used within 250 feet of the land surface. The Quaternary unconsolidated sediments unit is spatially heterogeneous, with locally confining conditions in some areas, and is the most heavily used hydrogeologic unit in the basin. Second, the Paleozoic sedimentary rocks unit, composed primarily of carbonates with some siliciclastic rocks, represents the major bedrock aquifer and contributes subsurface recharge at the margins of the alluvial aquifer. Third, the Tertiary volcanic rocks unit, composed primarily of andesite and dacite with lesser tuff, is locally important to water production, particularly in faulted and fractured zones. The Paleozoic sedimentary rocks hydrogeologic unit occurs at the valley margins and underlies tributaries throughout the basin, whereas the Tertiary volcanic rocks hydrogeologic unit primarily occurs in uplands in the western one-half of the basin. Fourth, the Quaternary basalt rocks unit consists of multiple basalt flows that are interbedded with the Quaternary unconsolidated sediments unit in the southern end of the Big Lost River Basin and contains at least three water-bearing zones. Insights gained from this updated hydrogeologic framework will help inform current water-resource management in the Big Lost River Basin.

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USGS2021

The role of neutral and adaptive genomic variation in population diversification and speciation in two ground squirrel species of conservation concern

Understanding the neutral (demographic) and adaptive processes leading to the differentiation of species and populations is a critical component of evolutionary and conservation biology. In this context, recently diverged taxa represent a unique opportunity to study the process of genetic differentiation. Northern and southern Idaho ground squirrels ( Urocitellus brunneus —NIDGS, and U . endemicus —SIDGS, respectively) are a recently diverged pair of sister species that have undergone dramatic declines in the last 50 years and are currently found in metapopulations across restricted spatial areas with distinct environmental pressures. Here we genotyped single-nucleotide polymorphisms (SNPs) from buccal swabs with restriction site-associated DNA sequencing (RADseq). With these data we evaluated neutral genetic structure at both the inter- and intraspecific level, and identified putatively adaptive SNPs using population structure outlier detection and genotype–environment association (GEA) analyses. At the interspecific level, we detected a clear separation between NIDGS and SIDGS, and evidence for adaptive differentiation putatively linked to torpor patterns. At the intraspecific level, we found evidence of both neutral and adaptive differentiation. For NIDGS, elevation appears to be the main driver of adaptive differentiation, while neutral variation patterns match and expand information on the low connectivity between some populations identified in previous studies using microsatellite markers. For SIDGS, neutral substructure generally reflected natural geographical barriers, while adaptive variation reflected differences in land cover and temperature, as well as elevation. These results clearly highlight the roles of neutral and adaptive processes for understanding the complexity of the processes leading to species and population differentiation, which can have important conservation implications in susceptible and threatened species.

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USGS2021

Golden Eagle dietary shifts following wildfire and shrub loss have negative consequences for nestling survivorship

Wildfires and invasive species have caused widespread changes in western North America’s shrub-steppe landscapes. The bottom–up consequences of degraded shrublands on predator ecology and demography remain poorly understood. We used a before–after paired design to study whether Golden Eagle ( Aquila chrysaetos ) diet and nestling survivorship changed following wildfires in southwestern Idaho, USA. We assessed burn extents from 1981 to 2013 and vegetation changes between 1979 (pre-burn) and 2014 (post-burn) within 3 km of Golden Eagle nesting centroids. We measured the frequency and biomass of individual prey, calculated diet diversity indexes, and monitored nestling survivorship at 15 territories in 1971–1981 and 2014–2015. On average, 0.70 of the area within 3 km of nesting centroids burned between 1981 and 2013, and the mean proportion of unburned shrubland decreased from 0.73 in 1979 to 0.22 in 2014. Diets in post-burn years were more diverse and had a lower proportion of some shrub-associated species, such as black-tailed jackrabbits ( Lepus californicus ) and mountain cottontails ( Sylvilagus nuttallii ), and a higher proportion of American Coots ( Fulica americana ), Mallards ( Anas platyrhynchos ), Piute ground squirrels ( Urocitellus mollis ), and Rock Pigeons ( Columba livia ) compared with pre-burn years. A high proportion of waterfowl represented a novel change in Golden Eagle diets, which are typically dominated by mammalian prey. Nestling survivorship was positively associated with the proportion of black-tailed jackrabbits and negatively associated with the proportion of Rock Pigeons in eagle diets. Rock Pigeons are a vector for Trichomonas gallinae , a disease-causing protozoan lethal to young eagles. Nesting attempts were more likely to fail (all young die) in the post-burn period compared with the pre-burn period. Dietary shifts are a common mechanism for predators to cope with landscape change, but shifts away from preferred prey to disease vectors affect nestling survivorship and could lead to population-level effects on productivity.

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USGS2021

Optimization of the Idaho National Laboratory water-quality aquifer monitoring network, southeastern Idaho

Long-term monitoring of water-quality data collected from wells at the Idaho National Laboratory (INL) has provided essential information for delineating the movement of radiochemical and chemical wastes in the eastern Snake River Plain aquifer, southeastern Idaho. Since 1949, the U.S. Geological Survey, in cooperation with the U.S. Department of Energy, has maintained as many as 200 wells in the INL water-quality monitoring network. A network design tool, distributed as an R package, was developed to evaluate and optimize groundwater monitoring in the existing network based on water-quality data collected at 153 sampling sites since January 1, 1989. The objective of the optimization design tool is to reduce well monitoring redundancy while retaining sufficient data to reliably characterize water-quality conditions in the aquifer. A spatial optimization was used to identify a set of wells whose removal leads to the smallest increase in the deviation between interpolated concentration maps using the existing and reduced monitoring networks while preserving significant long-term trends and seasonal components in the data. Additionally, a temporal optimization was used to identify reductions in sampling frequencies by minimizing the redundancy in sampling events. Spatial optimization uses an islands genetic algorithm to identify near-optimal network designs removing 10, 20, 30, 40, and 50 wells from the existing monitoring network. With this method, choosing a greater number of wells to remove results in greater cost savings and decreased accuracy of the average relative difference between interpolated maps of the reduced-dataset and the full-dataset. The genetic search algorithm identified reduced networks that best capture the spatial patterns of the average concentration plume while preserving long-term temporal trends at individual wells. Concentration data for 10 analyte types are integrated in a single optimization so that all datasets may be evaluated simultaneously. A constituent was selected for inclusion in the spatial optimization problem when the observations were sufficient to (1) establish a two-range variability model, (2) classify at least one concentration time series as a continuous record block, and (3) make a prediction using the quantile-kriging interpolation method. The selected constituents include sodium, chloride, sulfate, nitrate, carbon tetrachloride, 1,1-dichloroethylene, 1,1,1-trichloroethane, trichloroethylene, tritium, strontium-90, and plutonium-238. In temporal optimization, an iterative-thinning method was used to find an optimal sampling frequency for each analyte-well pair. Optimal frequencies indicate that for many of the wells, samples may be collected less frequently and still be able to characterize the concentration over time. The optimization results indicated that the sample-collection interval may be increased by an of average of 273 days owing to temporal redundancy.

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USGS2021

Nutrient limitation of algae and macrophytes in streams: Integrating laboratory bioassays, field experiments, and field data

Successful eutrophication control strategies need to address the limiting nutrient. We conducted a battery of laboratory and in situ nutrient-limitation tests with waters collected from 9 streams in an agricultural region of the upper Snake River basin, Idaho, USA. Laboratory tests used the green alga Raphidocelis subcapitata , the macrophyte Lemna minor (duckweed) with native epiphytes, and in situ nutrient-limitation tests of periphyton were conducted with nutrient-diffusing substrates (NDS). In the duckweed/epiphyte test, P saturation occurred when concentrations reached about 100 μg/L. Chlorophyll a in epiphytic periphyton was stimulated at low P additions and by about 100 μg/L P, epiphytic periphyton chlorophyll a appeared to be P saturated. Both duckweed and epiphyte response patterns with total N were weaker but suggested a growth stimulation threshold for duckweed when total N concentrations exceeded about 300 μg/L and approached saturation at the highest N concentration tested, 1300 μg/L. Nutrient uptake by epiphytes and macrophytes removed up to 70 and 90% of the N and P, respectively. The green algae and the NDS nutrient-limitation test results were mostly congruent; N and P co-limitation was the most frequent result for both test series. Across all tests, when N:P molar ratios >30 (mass ratios >14), algae or macrophyte growth was P limited; N limitation was observed at N:P molar ratios up to 23 (mass ratios up to 10). A comparison of ambient periphyton chlorophyll a concentrations with chlorophyll a accrued on control artificial substrates in N-limited streams, suggests that total N concentrations associated with a periphyton chlorophyll a benchmark for desirable or undesirable conditions for recreation would be about 600 to 1000 μg/L total N, respectively. For P-limited streams, the corresponding benchmark concentrations were about 50 to 90 μg/L total P, respectively. Our approach of integrating controlled experiments and matched biomonitoring field surveys was cost effective and more informative than either approach alone.

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USGS2021

Hibernation behavior of a federally-threatened ground squirrel: Climate change and habitat selection implications

Hibernation is an adaptation to survive periods of stress, from food limitation or harsh thermal conditions. A key question in contemporary ecology is whether rare, range-restricted species can change their behavior in response to climate change (i.e., through behavioral plasticity). The northern Idaho ground squirrel, Urocitellus brunneus (A. H. Howell, 1928), is a federally threatened species that hibernates for approximately 8 months per year within the bounds of its small range in central Idaho, USA. Changes in temperature, snow accumulation, and summer precipitation, all brought about as a result of climate change, may reduce survival or fecundity of northern Idaho ground squirrels if they cannot adapt to these climate changes. Hibernating species can respond to climate-change-induced thermal challenges in two ways: change their hibernation physiology and behavior (i.e., emergence date or number of torpor bouts) or alter their environment (i.e., change hibernacula depth or location). We explored a suite of intrinsic and extrinsic factors to document the extent to which they influenced hibernation behavior of northern Idaho ground squirrels. Emergence date was positively associated with snowpack and negatively associated with mean winter temperature. Mean minimum skin temperature was negatively associated with canopy closure and slope of a squirrel’s hibernaculum. Duration of the heterothermal period, number of euthermic bouts, and total time spent euthermic were positively associated with body mass. Immergence date and duration of the longest torpor bout were negatively associated with body mass. Warmer temperatures and less snow accumulation in the winter—caused by climate change—likely will cause altered emergence dates. Our results suggest that any future climate-induced changes in snowfall, ambient temperature, food availability, or habitat likely will impact survival of this rare ground squirrel, because such changes will cause changes in hibernation behavior, percent mass loss during hibernation, and duration of the active season when small mammals are more susceptible to predation.

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USGS2021

Weather affects post‐fire recovery of sagebrush‐steppe communities and model transferability among sites

Altered climate, including weather extremes, can cause major shifts in vegetative recovery after disturbances. Predictive models that can identify the separate and combined temporal effects of disturbance and weather on plant communities and that are transferable among sites are needed to guide vulnerability assessments and management interventions. We asked how functional group abundance responded to time since fire and antecedent weather, if long‐term vegetation trajectories were better explained by initial post‐fire weather conditions or by general five‐year antecedent weather, and if weather effects helped predict post‐fire vegetation abundances at a new site. We parameterized models using a 30‐yr vegetation monitoring dataset from burned and unburned areas of the Orchard Training Area (OCTC) of southern Idaho, USA, and monthly PRISM data, and assessed model transferability on an independent dataset from the well‐sampled Soda wildfire area along the Idaho/Oregon border. Sagebrush density increased with lower mean air temperature of the coldest month and slightly increased with higher mean air temperature of the hottest month, and with higher maximum January–June precipitation. Perennial grass cover increased in relation to higher precipitation, measured annually in the first four years after fire and/or in September–November the year of fire. Annual grass increased in relation to higher March–May precipitation in the year after fire, but not with September–November precipitation in the year of fire. Initial post‐fire weather conditions explained 1% more variation in sagebrush density than recent antecedent 5‐yr weather did but did not explain additional variation in perennial or annual grass cover. Inclusion of weather variables increased transferability of models for predicting perennial and annual grass cover from the OCTC to the Soda wildfire regardless of the time period in which weather was considered. In contrast, inclusion of weather variables did not affect transferability of the forecasts of post‐fire sagebrush density from the OCTC to the Soda site. Although model transferability may be improved by including weather covariates when predicting post‐fire vegetation recovery, predictions may be surprisingly unaffected by the temporal windows in which coarse‐scale gridded weather data are considered.

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USGS2021

A chemical and bio‐herbicide mixture increased exotic invaders, both targeted and non‐targeted, across a diversely invaded landscape after fire

Questions Invasive‐plant treatments often target a single or few species, but many landscapes are diversely invaded. Exotic annual grasses (EAGs) increase wildfires and degrade native perennial plant communities in cold‐desert rangelands, and herbicides are thus sprayed to inhibit EAG germination and establishment. We asked how EAG target and non‐target species responded to an herbicide mixture sprayed over a large, topographically diverse landscape after wildfire. We focused on how whole‐community and natural EAG‐pathogen treatment responses varied over years and physical properties of sites. Location Sagebrush steppe of southwest Idaho, USA. Methods We monitored plant cover and diversity in 41 pairs of plots located inside or outside areas (486 ha total) treated with a combined aerial broadcast spray of pre‐emergent herbicide (imazapic) and weed‐suppressive bacteria ( Pseudomonas fluorescens , “MB906”) to target EAGs after wildfires. Results EAG cover and exotic species richness were initially less in treated plots but increased to levels similar to or greater than those of untreated plots by the third post‐treatment year. The EAG pathogen Ustilago bullata was not directly affected by the treatment. The treatment increased exotic perennial forb cover in all plots and exotic annual forb cover in cooler/wetter plots but reduced exotic annual forb cover in warmer/drier plots. Cover of the invasive biennial grass Poa bulbosa decreased more across study years in untreated than treated plots. Among natives, the treatment reduced perennial grass cover and annual forb presence but led to marginal increases in perennial forb cover and, on soils with less gravel, increased shrub presence. Conclusions A treatment targeting a single plant functional group did not achieve lasting success in these diversely invaded communities. Spraying alone did not release native perennials sufficiently to counteract the simultaneous release of secondary invaders and the return of target invaders. Planting or seeding may also be needed to achieve management goals.

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USGS2021

Field methods, quality-assurance, and data management plan for water-quality activities and water-level measurements, Idaho National Laboratory, Idaho

Introduction Water-quality activities and water-level measurements conducted by the U.S. Geological Survey (USGS) Idaho National Laboratory (INL) Project Office coincide with the USGS mission of appraising the quantity and quality of the Nation’s water resources. The activities are conducted in cooperation with the U.S. Department of Energy’s (DOE) Idaho Operations Office. Results of water-quality and hydraulic head investigations are presented in various USGS publications or in refereed scientific journals, and the data are stored in the National Water Information System (NWIS) database. The results of the studies are used by researchers, regulatory and managerial agencies, and civic groups. In its broadest sense, “quality assurance” refers to doing the job right the first time. It includes the functions of planning for products, review and acceptance of the products, and an audit designed to evaluate the system that produces the products. Quality control and quality assurance differ in that quality control ensures that things are done correctly given the “state-of-the-art” technology, and quality assurance ensures that quality control is maintained within specified limits.

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USGS2021

Post-fire management targeting invasive annual grasses may have inadvertently released the exotic perennial forb Chondrilla juncea and suppressed its biocontrol agent

Top-down and bottom-up factors affecting invasive populations are rarely considered simultaneously, yet their interactive responses to disturbances and management interventions can be essential to understanding invasion patterns. We evaluated post-fire responses of the exotic perennial forb Chondrilla juncea (rush skeletonweed) and its biocontrol agents to landscape factors and a post-fire combined herbicide (imazapic) and bacteria ( Pseudomonas fluorescens strain MB906) treatment that targeted invasive annual grasses in a sagebrush steppe ecosystem. Biocontrol agents released against C. juncea in previous decades included Cystiphora schmidti (gall midge), Aceria chondrillae (gall mite), and Puccinia chondrillina (rust fungus). C. juncea abundance was greater in sprayed than unsprayed plots, and where soils were coarser, slopes faced southwest, solar heat loads and topographic water accumulation were greater, and cover of deep-rooted native perennials was lower. Mite infestation was greater in unsprayed plots, midge infestation was greater at higher elevations on steeper slopes, and midges were more abundant while rust was less abundant on gravelly soils. Biocontrol infestation levels varied considerably between years and could not be predicted in 2019 from 2018 infestation levels. Multiple biocontrol species were often present at the same plots but were rarely present on the same C. juncea individuals. These results suggest that spatial patterns of invasion by C. juncea are related to deep-soil water availability, warmer conditions, and alleviation of competition. Treatments designed to reduce invasive annual grasses may inadvertently release C. juncea by both reducing plant competition for soil resources and affecting biocontrol agent (mite) abundance.

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USGS2021

Multilevel groundwater monitoring of hydraulic head, water temperature, and chemical constituents in the eastern Snake River Plain aquifer, Idaho National Laboratory, Idaho, 2014–18

Radiochemical and chemical wastewater discharged to infiltration ponds and disposal wells since the early 1950s at the Idaho National Laboratory (INL), southeastern Idaho, has affected the water quality of the eastern Snake River Plain (ESRP) aquifer. In 2006, the U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Energy, added a multilevel well-monitoring network to their ongoing monitoring program to begin describing the vertical movement and distribution of the chemical constituents in the ESRP aquifer. The multilevel monitoring system (MLMS) at the INL has been ongoing since 2006, and this report summarizes data collected during 2014–18 from 11 multilevel monitoring wells. Hydraulic head (head) and groundwater temperature data were collected, including 177 measurements from hydraulically isolated depth intervals from 448.0 to 1,377.6 feet below land surface. One port (port 3) within well USGS 134 was not monitored owing to a valve failure . Note: This is a partial abstract.

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USGS2021

Stream restoration is influenced by details of engineered habitats at a headwater mine site

A lack of information regarding which ecological factors influence restoration success or failure has hindered scientifically based restoration decision-making. We focus on one headwater site to examine factors influencing divergent ecological outcomes of two post-mining stream restoration projects designed to improve instream conditions following 70 years of mining impacts. One project was designed to simulate natural stream conditions by creating a morphologically complex channel with high habitat heterogeneity (HH-reach). A second project was designed to reduce contaminants and sediment using a sand filter along a straight, armored channel, which resulted in different habitat characteristics and comparatively low habitat heterogeneity (LH-reach). Within 2 years of completion, stream habitat parameters and community composition within the HH-reach were similar to those of reference reaches. In contrast, habitat and community composition within the LH-reach differed substantially from reference reaches, even 7–8 years after project completion. We found that an interaction between low gradient and high light availability, created by the LH-reach design, facilitated a Chironomid- Nostoc mutualism. These symbionts dominated the epilithic surface of rocks and there was little habitat for tailed frog larvae, bioavailable macroinvertebrates, and fish. After controlling for habitat quantity, potential colonizing species’ traits, and biogeographic factors, we found that habitat characteristics combined to facilitate different ecological outcomes, whereas time since treatment implementation was less influential. We demonstrate that stream communities can respond quickly to restoration of physical characteristics and increased heterogeneity, but “details matter” because interactions between the habitats we create and between the species that occupy them can be complex, unpredictable, and can influence restoration effectiveness.

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USGS2021

Aural and visual detection of greater sage-grouse leks: Implications for population trend estimates

Counts of greater sage-grouse ( Centrocercus urophasianus ) at leks have been used in harvest management, Endangered Species Act listing decisions, and land management policies for over half a century. Lek count sampling methods focus on counting male sage-grouse at known leks, primarily those observed visually from roads or vantage points, but leks are likely missed that are unknown prior to the survey and are difficult to detect while driving between known lek sites. One way to ameliorate this shortfall may be to conduct short point-count surveys at multiple stops along lek-survey routes or while driving between lek counts, thereby detecting newly established or unknown leks. To evaluate the feasibility of this approach, we estimated aural and visual detection probability of active sage-grouse leks during 1-minute point-count surveys at known distances and examined the effects of environmental factors on aural lek detection in southern Idaho, USA, 2016–2017. Our results demonstrate that field observers can aurally detect sage-grouse leks at approximately 3 times greater distances compared to detecting leks visually. The probability of hearing an active lek was highest near the peak of male and female attendance (8 Apr), within an hour of sunrise, on relatively calm and cold days, when the observer was at a higher elevation relative to the lek, and during conditions with no background noise. Detection probability declined with distance and the probability of aural detection was 0.59 at 1 km from a lek when other variables were held at their means. Hence, conducting ≥3 1-minute surveys along a lek route would be expected to detect ≥93% of all leks within 1.5 km of each survey under the average environmental conditions in our study. Our results suggest that surveys could greatly improve detection of unknown or newly established leks and can facilitate a more accurate assessment of sage-grouse population trends through lek counts. Moreover, our results demonstrate how environmental factors influence the detection of leks during surveys, and therefore which variables should be considered for inclusion in any future revisions of lek count protocols or in analyses of lek count data.

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USGS2021

Performance of the ecosystem demography model (EDv2.2) in simulating gross primary production capacity and activity in a dryland study area

Dryland ecosystems play an important role in the global carbon cycle, including regulating the inter-annual global carbon sink. Dynamic global vegetation models (DGVMs) are essential tools that can help us better understand carbon cycling in different ecosystems. Currently, there is limited knowledge of the performance of these models in drylands partly due to characterizing the heterogeneity of the vegetation and hydrometeorological conditions. The aim of this study is to evaluate the performance of a DGVM for drylands to facilitate improved understanding of gross primary production (GPP) as one of the important components of the carbon cycle. We performed a sensitivity analysis and calibrated the Ecosystem Demography (EDv2.2) DGVM to simulate GPP in a dryland watershed (Reynolds Creek Experimental Watershed, Idaho) in the western US for the years 2000-2017. GPP capacity and activity were investigated by comparing model simulations with GPP estimated from eddy covariance data (available from 2015-2017) and remote sensing products (2000-2017). Our results show good performance of EDv2.2 at daily timesteps ( R M S E ≈ 0.38 [ kgC / m 2 / year ] ) "> RMSE≈0.38[kgC/m2/year])

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USGS2021

Effect of organic matter concentration and characteristics on mercury mobilization and methylmercury production at an abandoned mine site

Thousands of abandoned mines throughout the western region of North America contain elevated total-mercury (THg) concentrations. Mercury is mobilized from these sites primarily due to erosion of particulate-bound Hg (THg-P). Organic matter-based soil amendments can promote vegetation growth on mine tailings, reducing erosion and subsequent loading of THg-P into downstream waterbodies. However, the introduction of a labile carbon source may stimulate microbial activity that can produce methylmercury (MeHg)—the more toxic and bioaccumulative form of Hg. Our objectives were to investigate how additions of different organic matter substrates impact Hg mobilization and methylation using a combination of field observations and controlled experiments. Field measurements of water, sediment, and porewater were collected downstream of the site and multi-year monitoring (and load calculations) were conducted at a downstream gaging station. MeHg production was assessed using stable isotope methylation assays and mesocosm experiments that were conducted using different types of organic carbon soil amendments mixed with materials from the mine site. The results showed that >80% of the THg mobilized from the mine was bound to particles and that >90% of the annual Hg loading occurred during the period of elevated discharge during spring snowmelt. Methylation rates varied between different types of soil amendments and were correlated with the components of excitation emission matrices (EEMs) associated with humic acid fractions of organic matter. The mesocosm experiments showed that under anoxic conditions carbon amendments to tailings could significantly increase porewater MeHg concentrations (up to 13 ± 3 ng/L). In addition, the carbon amendments significantly increased THg partitioning into porewater. Overall, these results indicate that soil amendment applications to reduce surface erosion at abandoned mine sites could be effective at reducing particulate Hg mobilization to downstream waterbodies; however, some types of carbon amendments can significantly increase Hg methylation as well as increase the mobilization of dissolved THg from the site.

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