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Research about Arizona

Source-linked reports with geographic coverage including Arizona.

At least 73 records · Page 4Linked to original sources
USGS2025

Uranium mining, the Grand Canyon region, and the science of an ecosystem

Illustration of U.S. Geological Survey science at breccia pipe mines in the Grand Canyon region. The upper left portion shows a cross section of a breccia pipe and rock layers (far upper left) in a panoramic view of the Grand Canyon with upper right depicting rock pinnacles the Havasupai Tribe call Wi’i Gileeva. The right portion depicts a spring. The Colorado River bisects the illustration. A typical breccia pipe uranium mine site is shown in the lower left. Local plant and animal species studied are also included.

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USGS2025

Hotter temperatures alter riparian plant outcomes under regulated river conditions

Climate change and river regulation alter environmental controls on riparian plant occurrence and cover worldwide. Simultaneous changes to river flow and air temperature could result in unanticipated plant responses to novel environmental conditions. Increasing temperature could alter riparian plant response to hydrology and other factors, while river regulation may exacerbate environmental stress through novel flows like those resulting from power generation. Further, plant establishment and growth may require differing conditions, which may be decoupled by novel conditions. Using a large dataset that spans a natural 5°C mean annual temperature (MAT) gradient and a Bayesian model that integrates plant occurrence and cover, we address four questions: (1) Does hotter MAT modify plant response to hydrology, substrate composition, topography, and cover of co-occurring plant species? (2) Does the timing of hydropower tides benefit some species over others? (3) Does dam-induced erosion hinder riparian species more than upland species? (4) Do occurrence and cover respond to different environmental variables, allowing for decoupling of life history processes? We addressed these questions with data collected along 364 km of the Colorado River downstream of Glen Canyon Dam, Arizona, United States of America. Occurrence and cover class were recorded in >10,000 plots from 2016 to 2020, along with environmental covariates that repeat across the climate gradient. For 36 species, plant occurrence and cover were modeled with respect to MAT, hydrology, substrate, topography, other plant cover, and their interactions with MAT. There were four key results. (1) Increasing MAT will not only directly influence plants but will mediate their responses to the environment, including greater dependence on stable water supplies. (2) The timing of hydropower tides shapes plant community composition. (3) Dam-related erosion has an outsized effect on riparian species, which could lead to a loss of regionally unique plant species. (4) For all species, the most important covariates driving occurrence differed from those for cover, suggesting the potential for these life stages to be decoupled. Not only will climate change and river regulation independently alter plant distributions, interactions among hotter temperature, dam-controlled flow patterns, and limited fine sediments will determine which species flourish or perish under future conditions.

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USGS2025

“Leaky weirs” capture alluvial deposition and enhance seasonal mountain-front recharge in dryland streams

“Leaky weirs” are rock structures installed in dryland streams, which are anchored into exposed bedrock, loosely cemented, and designed to allow water to slowly pass through. They are being tested at a ranch in southeastern Arizona, USA, to restore and conserve the historic range and desert wetlands. Data are collected to assess how leaky weirs impact surface water, subsurface water, and groundwater recharge—including stream discharge, timing, and depth of infiltration, and groundwater elevations. Three adjacent watersheds, two with outlets just below leaky weirs and one with leaky weirs farther upstream, were instrumented with water-level loggers, wildlife cameras, and crest stage instruments with temperature sensors in the soil. As most groundwater recharge is assumed to be focused along the mountain fronts in this region, mountain-block recharge is also evaluated to differentiate between the two using isotope analyses. Finally, a single, late-season flood event is scrutinized to consider the leaky weir effect on all monitored components in the water budget. Results indicated groundwater flow is primarily from the mountains to the east via older, regional mountain-block recharge. However, the development of shallow alluvial aquifers is supported by the leaky weirs, that slow flows, capture permeable sediments, and allow infiltration, thus enhancing mountain-front recharge. In turn, these new pockets of water help support the restoration of historic wetlands. Sediment accumulates where leaky weirs are installed, reducing flashy peak flows, and resulting in a series of infiltration ponds along the channel that support vegetation during growing seasons and recharge the shallow aquifer during non-growing seasons.

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USGS2025

Parentage and sibship relationships among captive snakes at the Phoenix Zoo—2024 data summary

Introduction The narrow-headed gartersnake ( Thamnophis rufipunctatus ) is listed as threatened under the Endangered Species Act (U.S. Fish and Wildlife Service, 2014). This species has a strong association with aquatic habitats, and these habitats have been highly altered by impoundments, land-use changes, and the introduction and spread of non-native aquatic species, which contributed to declines in Arizona and New Mexico for the last 30–40 years. Captive breeding programs can be used for genetic rescue and conservation of threatened and endangered species (Frankham, 2010). Often based on pedigree analyses, captive management plans aim to retain genetic diversity, limit inbreeding, and avoid adaptation to captivity (Foose and Ballou, 1988; Hedrick and Miller, 1992; Ivy and others, 2009; Frankham, 2010). In 2011, the Arizona Center for Nature Conservation/Phoenix Zoo (hereafter Phoenix Zoo) developed an ex-situ captive breeding management plan for T. rufipunctatus , with the aim to propagate and release individual T. rufipunctatus back into their native range (Blais and others, 2022). We sequenced 125 microsatellite loci to generate genetic toolsets to track pedigree and assess paternity and sibship relationships for this captive breeding program. Specifically, we used microsatellite loci to assign paternity and relatedness among eight litters composed of multiple female and male snakes born between 2014 and 2023 at the Phoenix Zoo breeding facility. We also completed sibship analysis for six wild gartersnakes collected from Canyon Creek, Arizona, that were brought into the Phoenix Zoo breeding facility in 2017 and 2018.

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USGS2025

Groundwater-storage change in the north Phoenix aquifer, Arizona, 2020–23

The city of Phoenix, Arizona, relies primarily on surface water for municipal water supply. The city also maintains wells to withdraw groundwater, particularly in times of drought and reduced surface-water supply, and to recharge groundwater when excess surface water is available. As of 2023, withdrawals from the aquifer in the northeastern part of the city are a small volume of water, less than 3,000 acre-feet in most years. Each year a similar volume of water is recharged through injection wells. The withdrawal wells are permitted to produce in total more than 20,000 acre-feet per year; increased pumping could lead to future groundwater-storage declines. To better understand groundwater-storage change in the north Phoenix aquifer, a repeat microgravity monitoring network was established in 2020. Measurements of changes in Earth’s gravity provide a direct, non-invasive measurement of subsurface mass change. Groundwater-storage changes were small during the 2020–23 study period, consistent with the relatively small volumes of pumping and recharge. Groundwater levels measured in monitoring wells were stable or increased slightly during this period, although the number of monitoring wells within the area of the gravity monitoring network is sparse. In total, about 15,000 acre-feet of water were pumped and 31,000 acre-feet recharged through injection in the north Phoenix aquifer during the 2020–22 period. Within the monitored area, groundwater storage increased by a small amount, about 1,000 acre-feet, in 2020, and decreased by a larger amount, about 6,000 acre-feet, each year in 2021 and 2022. Storage decreased at 89 of 102 stations from 2020 to 2023. Groundwater-storage decreases greater than the volume of net pumping indicate down-gradient subflow from the aquifer is greater than recharge plus incoming subflow, drying of the unsaturated zone resulting from decreased land-surface recharge, or both. At present (2023), the aquifer appears able to store and supply the relatively small amounts of water needed without excessive drawdown or harmful effects, such as land subsidence and surface inundation. If pumping or recharge increases in the future, the established repeat microgravity network is well suited to capture the spatial extent and magnitude of groundwater-storage changes in the aquifer.

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USGS2025

Mixed natal origins present management challenges for a non-native fish established throughout a modified river network

Expansion of non-native brown trout ( Salmo trutta ) in the Colorado River below Glen Canyon Dam motivated reevaluation of suppression strategies to minimize potential impacts to native fishes in the Grand Canyon, Arizona, USA. Brown trout are one of several non-native fish species of management concern in this river reach, and understanding their natal sources and movement patterns may assist managers in planning suppression strategies. We identified trace elements in brown trout otoliths, which, when coupled with location-specific water chemistry data, identified brown trout natal origins over 19 years. Strontium and manganese concentrations revealed distinct emigration patterns from natal tributary streams and the mainstem Colorado River over two periods. Adult brown trout collected from throughout our study area showed mixed tributary and mainstem natal origins, which persisted during suppression efforts in a known spawning tributary. Unexpectedly, we found evidence of brown trout reproduction in the Colorado River for at least a decade before documentation through field monitoring. Our findings may inform but complicate the development of management strategies for system-wide brown trout suppression.

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USGS2025

The Mammoth magnetic anomaly, Pinal County, Arizona

A high-resolution Earth Mapping Resources Initiative airborne geophysical survey was flown in the southwest North American porphyry copper province to improve bedrock geologic maps and to identify areas that have unrecognized critical mineral resource potential. During the review of the aeromagnetic data, a distinctly monopolar-shaped, negative magnetic anomaly was observed at a flight elevation of 200 m above the ground with a maximum amplitude of –9500 nT. We have named this the Mammoth magnetic anomaly (MMA) because it is centered 12 km northeast of the town of Mammoth, Arizona, USA. The total field anomaly (TFA) contour of –500 nT enclosing the MMA defines an elongate shape measuring 2.5 km long by 1 km wide that trends northwest–southeast. Given the striking nature of this negative, monopolar-shaped magnetic anomaly, we conducted a ground campaign in May 2025 to determine its authenticity and potential relationship to critical mineral endowment. The MMA was confirmed on the ground with a TFA approaching –46,000 nT. Total magnetic intensity (TMI) observations routinely fell below the 18,000 nT operating floor of an industry-standard cesium-vapor total field magnetometer, and extremely low TMI measurements were corroborated along coincident traverse lines using two high dynamic range, but lower sensitivity, smartphone vector magnetometers. The lowest TMI values recorded by both smartphone magnetometers were 1000 nT and confirmed with multiple adjacent and crossing lines. Field observations suggest that this magnetic feature is caused by strong remanent magnetization within fine-grained magnetite hosted within locally altered Pinal Schist.

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USGS2025

Serological assessment of pathogen exposure among desert bighorn sheep in southwestern Arizona

Bighorn sheep ( Ovis canadensis ) are influenced by infectious diseases. Although Mycoplasma ovipneumoniae has been the main focus of bighorn sheep managers since early 2010, other pathogens may also influence bighorn sheep populations. We sampled desert bighorn sheep ( Ovis canadensis mexicana ) captured for a study on the Cabeza Prieta National Wildlife Refuge in southwestern Arizona, USA, 2001–2005, for a suite of pathogens: bluetongue (BT), epizootic hemorrhagic disease (EHD), parainfluenza 3, bovine respiratory syncytial virus, Clamydia , seven Leptospira serovars, bovine herpesvirus 1 (causative agent of infectious bovine rhinotracheitis), bovine viral diarrhea virus, and bovine respiratory syncytial virus. We recorded evidence of exposure to seven of these pathogens, with two Leptospira serovars ( hardjo and bratislava ), five strains of BT, and two strains of EHD detected. Seroprevalence rates of detected pathogens varied between 12–49%. We observed high levels of co-occurrence for EHD and BT. These results highlight that multiple pathogens may influence desert bighorn sheep populations. These data also provide historical context to pathogen exposure for a region where few such data are available.

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USGS2025

Arsenic accumulation in Sonora Mud Turtles (Kinosternon sonoriense) in an unusual freshwater food web

Montezuma Well is an unusual fishless, spring-fed, desert wetland in central Arizona. Water in the wetland is naturally enriched with > 100 µg/l dissolved geogenic arsenic (As) and supports a simple aquatic food web dominated by a small number of endemic invertebrate species that achieve high abundances. Previous studies of As among various environmental compartments and organisms in Montezuma Well did not include omnivorous Sonora Mud turtles ( Kinosternon sonoriense ) despite their potential importance in the As cycle by virtue of their substantial biomass and role as top predators. We measured As concentrations in water, sediment, and organisms (macrophytes, amphipods, insects, leeches, and turtles) representing a range of trophic levels in order to document the importance of turtles at the apex of the Montezuma Well food web and in the As cycle. Concentrations of As in turtles varied according to tissue type. The greatest values (up to 26.77 mg/kg dry weight) were in the scutes of 1 of our oldest turtles (31.5 yrs). These elevated concentrations may be due to the affinity of As to react with sulfur in the keratin of scutes, and therefore might reflect duration of exposure in long-lived turtles. Although As concentrations generally tend to decrease when moving up to higher trophic levels in a food web, our results were different. Relatively elevated concentrations reported in sediments by us and a previous study declined in plant samples as expected. Amphipod concentrations increased but then decreased again in 3 of their invertebrate predators. Arsenic concentrations in endemic leeches were extremely elevated with a mean value of 72.2 mg/kg. The mean concentration of As in turtles was 7.08 mg/kg across tissue types and was greater than the plants or invertebrates they eat, with the notable exception of leeches, which have been proposed to be part of their diet.

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USGS2025

Northward migrations of nonbreeding Bald Eagles from Arizona, USA.

Knowledge of the spatiotemporal patterns of migratory and nonbreeding-season movements by animals is critical for conservation, but can be difficult to obtain if animals move far from known breeding territories and across administrative and country borders. To understand the migratory movements of Bald Eagles ( Haliaeetus leucocephalus ) originating from a demographically closed population in Arizona, USA, we deployed GPS transmitters on 24 juveniles and 2 nonbreeding adult eagles between 2017 and 2023. We identified common migration routes, stopover locations, and migration phenology. Eagles moved north from Arizona during the population's post-breeding period in the boreal spring and summer, and returned south in autumn in advance of the breeding season. Eagles migrated along two primary routes: (1) along the Wasatch Mountains in Utah and extending into the Rocky Mountains of southern Idaho, and (2) through eastern Nevada and along the Rocky Mountains in western and northern Idaho. Stopover locations were frequently near lakes and rivers. Recent fledglings began migration later than older individuals and 15 of 16 of these juveniles that survived until the following breeding season returned to Arizona. The individual that did not return showed evidence of permanent emigration to northern California. Our results contribute to a growing understanding of avian migration routes within the Pacific Flyway and the diverse migration strategies, including northward migration following the breeding season, exhibited across raptor populations. We highlight that explicit studies of juveniles, subadults, and nonbreeding adults are key to understanding avian migration dynamics and identifying opportunities for conservation.

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USGS2024

Evidence of extensive home range sharing among mother–daughter bobcat pairs in the wildland–urban interface of the Tucson Mountains

Urbanization impacts the structure and viability of wildlife populations. Some habitat generalists, such as bobcats ( Lynx rufus ), maintain populations at the intersection of wild and urban habitats (wildland urban interface, WUI), but impacts of urbanization on bobcat social structure are not well understood. Although commonly thought to establish exclusive home ranges among females, instances of mother-daughter home range sharing have been documented. We combined GPS localities with genomic relatedness inferences from double-digest restriction site associated DNA sequencing (ddRADseq) to investigate mother-daughter home range sharing in bobcats ( n = 38) at the WUI in the Tucson Mountains, Arizona, USA. We found the highest relatedness among females, which showed stronger isolation by distance than males and the population as a whole. Using mother-daughter relationships inferred from pedigree reconstruction, we found extensive mother-daughter home range sharing, compared to other females. Every mother identified as having at least one daughter, shared home ranges with one daughter, while other confirmed daughters established adjacent home ranges. Our results provide substantial support for the mother-daughter home range sharing hypothesis, as well as evidence of spatiotemporal overlap between mothers and daughters, adding to the body of research complicating the solitary felid paradigm. These results additionally challenge the notion of home range partitioning by prior rights land tenure, suggesting a role of matrilineal land tenure in home range establishment of daughters. Habitat fragmentation due to human population growth and urbanization thus has the potential to alter landscape genetic structure and social dynamics in bobcats.

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USGS2024

Hydrodynamic model of the Colorado River, Glen Canyon Dam to Lees Ferry in Glen Canyon National Recreation Area, Arizona

The U.S. Geological Survey constructed a two-dimensional hydrodynamic model that was applied to a 15.8-mile tailwater reach of the Colorado River in Glen Canyon that begins 0.25 mile downstream from Glen Canyon Dam and extends to Lees Ferry in Glen Canyon National Recreation Area, Arizona. The model used the Flow and Sediment Transport with Morphological Evolution of Channels (FaSTMECH) solver in the International River Interface Cooperative (iRIC) modeling interface. The model grid was developed from a full channel digital elevation model derived by combining bathymetric and topographic data collected from March 2013 to February 2016. The model was used to predict water-surface elevations, depths, depth-averaged flow velocities, and bed shear stresses for discharges ranging from 1,000 to 70,000 cubic feet per second. Modeled water-surface elevations matched well with measured values at cross sections throughout the reach, with a mean absolute error of 0.14 meter over the range of typical discharge releases from Glen Canyon Dam. The mean error on discharge, a measure of how well the model solution converged, averaged 0.6 percent and did not exceed 2 percent over the range of discharges modeled. These results indicate that model predictions of hydraulic parameters are reasonably accurate and suitable for use for a variety of purposes, such as ecological and geomorphic modeling.

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USGS2024

Evaluating the effects of nest management on a recovering raptor using integrated population modeling

Evaluating population responses to management is a crucial component of successful conservation programs. Models predicting population growth under different management scenarios can provide key insights into the efficacy of specific management actions both in reversing population decline and in maintaining recovered populations. Bald eagle ( Haliaeetus leucocephalus ) conservation in the United States has seen many successes over the last 50 years, yet the extent to which the bald eagle population has recovered in Arizona, an important population within the Southwest region, remains an area of debate. Estimates of the species' population trend and an evaluation of ongoing nest-level management practices are needed to inform management decisions. We developed a Bayesian integrated population model (IPM) and population viability analysis (PVA) using a 36-year dataset to assess Arizona bald eagle population dynamics and their underlying demographic rates under current and possible future management practices. We estimated that the population grew from 77 females in 1993 to 180 females in 2022, an average yearly increase of 3%. Breeding sites that had trained personnel (i.e., nestwatchers) stationed at active nests to mitigate human disturbance had a 28% higher reproductive output than nests without this protection. Uncertainty around population trends was high, but scenarios that continued the nestwatcher program were less likely to predict abundance declines than scenarios without nestwatchers. Here, the IPM-PVA framework provides a useful tool both for estimating the effectiveness of past management actions and for exploring the management needs of a delisted population, highlighting that continued management action may be necessary to maintain population viability even after meeting certain recovery criteria.

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USGS2024

Lidar estimation of storage capacity for managed water resources used by Desert Bighorn Sheep (Ovis canadensis mexicana) at Cabeza Prieta National Wildlife Refuge, Arizona

In cooperation with the U.S. Fish and Wildlife Service, the U.S. Geological Survey Southwest Biological Science Center employed ground-based light detection and ranging (lidar) during February 2022 to help meet two resource management objectives at the Cabeza Prieta National Wildlife Refuge (CPNWR), Arizona. The two objectives are (1) characterize the water storage capacity for one developed and two modified tanks, which are bedrock catchments also referred to as tinajas, that are important water sources for desert bighorn sheep ( Ovis canadensis mexicana ) in designated wilderness at the CPNWR; and (2) develop a stage-storage model to estimate water volumes from monitoring observations of water surface levels in each tank. We measured storage capacity for the three tanks identified by refuge managers, Buckhorn, Senita, and Eagle, using ground-based lidar collected during February 2022. These data produced high-resolution (centimeter scale) topographic models that improved estimates of maximum water storage capacity over previous geometry-based estimates, permitting estimations of storage capacity at multiple water surface levels (stage heights). We found that the maximum water storage capacity for the Buckhorn, Senita, and Eagle tanks was 9,108.730, 8,623.308, and 6,039.603 US gallons (gal), respectively. For each tank we report a stage-storage model based on a polynomial function that best explained variability in water storage capacity as a function of water stage height. The results presented herein will permit the CPNWR managers to (1) easily estimate water available for wildlife at any point of time, (2) interpret tank recharge following rainstorms, and (3) decide whether and when to transport water via vehicles to mechanically refill the tanks in designated wilderness.

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USGS2024

Northern Mexican gartersnake demographics and movement ecology

The northern Mexican gartersnake ( Thamnophis eques ; hereafter NMGS) is a federally threatened species occurring in riparian areas in central and southeast Arizona and west-central New Mexico. While previous studies have examined the ecology of this species in central Arizona, less is known about NMGS ecology in grassland landscapes of southeast Arizona. This project continues a long-term mark-recapture study of NMGS in the upper Santa Cruz River in the San Rafael Valley of southeast Arizona. We analyzed mark-recapture data collected by Arizona Game and Fish Department from 2008–2019 and included data we collected during 2022 and 2023. We also studied NMGS movement ecology using a combination of externally attached GPS transmitters and surgically implanted VHF transmitters. We had 517 NMGS captures over 26 survey sessions across the entire study, 186 of which were captures of previously marked snakes. Most of our captures were females and evidence of a statistically significant female-biased sex ratio was present on three survey sessions. Trapping success was generally highest June-September and catch-per-unit-effort (CPUE) was strongly correlated with the number of individuals captured. We used mark-recapture data from 288 individuals to estimate annual apparent survival and session-specific recapture probabilities. Annual apparent survival was higher for females (0.72, 95% highest posterior density intervals [HPDI] = 0.630.81) than for males (0.58, 95% HPDI = 0.44–0.72). Session-specific recapture probabilities were similar for males and females and were highly correlated with CPUE. During 2023, we monitored the movements of 13 adult females using GPS transmitters, two adult males using VHF transmitters, and one adult female using a GPS transmitter followed by a VHF transmitter. GPS transmitters were deployed from 7-18 days at a time as limited by battery life. After filtering out low-quality GPS locations, we obtained a total of 1,688 hourly GPS locations. Mean and maximum distances moved per hour ranged from 5.54–10.92 m and 15.24–135.71 m, respectively, across GPS transmitter attachment periods. Space use estimates from 100% minimum convex polygons ranged from 0.04–1.16 ha across GPS transmitter attachment periods. All documented NMGS movements during 2023 were relatively close (< 100 m) to the Santa Cruz River. These results continue to build upon our knowledge of NMGS ecology and suggest the continued presence of a relatively robust population within the upper Santa Cruz River.

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USGS2024

Implementation of controlled floods for sediment management on the Colorado River in Grand Canyon under aridification

In addition to supplying water for agriculture, cities, and industry, the Colorado River traverses the Colorado Plateau, including several of the most unique and valued National Parks and Recreation Areas in the United States. Although the water needs of these landscapes were not considered at the time water allocations were first negotiated, these needs were recognized in subsequent legislation and policy. Management goals address a range of aquatic and riparian resources, including fine sediment (sand, silt, and clay) which, in Grand Canyon, is important for ecological, cultural, and recreational resources. Over ~30 years, stakeholders, resource managers, and scientists collectively developed operational strategies for sediment management to meet goals outlined by an adaptive management program. However, prolonged drought, or “aridification,” resulting in declining runoff and the lowest reservoir storage elevations in decades has challenged those strategies. The paradigm for sustainable sediment management relies on (1) sand accumulation on the bed of the Colorado River during periods of sediment-rich tributary floods from summer/fall thunderstorms, and (2) dam-released controlled (artificial) floods, referred to as High-Flow Experiments (HFEs), to redistribute the accumulated sand to rebuild eroded bar and floodplain deposits. The management protocol, which specifies narrowly defined sand accumulation periods and HFE implementation windows, is based on implementing HFEs in late fall during the period of greatest sediment enrichment, before higher winter releases for hydropower erode the accumulated sand from the riverbed. Low dam releases associated with drought, however, have changed the pattern of sand accumulation and low reservoir elevations have prevented HFE implementation in the defined window. An alternative strategy for HFE planning and implementation was tested opportunistically in April 2023 following lower-than-normal winter dam releases. We present findings from this HFE indicating that sand enrichment and sandbar building equaled or exceeded that of HFEs conducted under the established management protocol. These findings show that management goals for sediment under conditions of prolonged drought may be achievable but will likely require substantial changes in dam management strategies.

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