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USGS2017

Application of an unstructured 3D finite volume numerical model to flows and salinity dynamics in the San Francisco Bay-Delta

A linked modeling approach has been undertaken to understand the impacts of climate and infrastructure on aquatic ecology and water quality in the San Francisco Bay-Delta region. The Delft3D Flexible Mesh modeling suite is used in this effort for its 3D hydrodynamics, salinity, temperature and sediment dynamics, phytoplankton and water-quality coupling infrastructure, and linkage to a habitat suitability model. The hydrodynamic model component of the suite is D-Flow FM, a new 3D unstructured finite-volume model based on the Delft3D model. In this paper, D-Flow FM is applied to the San Francisco Bay-Delta to investigate tidal, seasonal and annual dynamics of water levels, river flows and salinity under historical environmental and infrastructural conditions. The model is driven by historical winds, tides, ocean salinity, and river flows, and includes federal, state, and local freshwater withdrawals, and regional gate and barrier operations. The model is calibrated over a 9-month period, and subsequently validated for water levels, flows, and 3D salinity dynamics over a 2 year period. Model performance was quantified using several model assessment metrics and visualized through target diagrams. These metrics indicate that the model accurately estimated water levels, flows, and salinity over wide-ranging tidal and fluvial conditions, and the model can be used to investigate detailed circulation and salinity patterns throughout the Bay-Delta. The hydrodynamics produced through this effort will be used to drive affiliated sediment, phytoplankton, and contaminant hindcast efforts and habitat suitability assessments for fish and bivalves. The modeling framework applied here will serve as a baseline to ultimately shed light on potential ecosystem change over the current century.

California↗

USGS2011

Sediment dynamics and the burial and exhumation of bedrock reefs along an emergent coastline as elucidated by repetitive sonar surveys: Northern Monterey Bay, CA

Two high-resolution bathymetric and acoustic backscatter sonar surveys were conducted along the energetic emergent inner shelf of northern Monterey Bay, CA, USA, in the fall of 2005 and the spring of 2006 to determine the impact of winter storm waves, beach erosion, and river floods on biologically-important siliclastic bedrock reef habitats. The surveys extended from water depths of 4 m to 22 m and covered an area of 3.14 km2, 45.8% of which was bedrock, gravel, and coarse-grained sand and 54.2% was fine-grained sand. Our analyses of the bathymetric and acoustic backscatter data demonstrates that during the 6 months between surveys, 11.4% of the study area was buried by fine-grained sand while erosion resulted in the exposure of bedrock or coarse-grained sand over 26.5% of the study area. The probability of burial decreased with increasing water depth and rugosity; the probability of exhumation increased with increasing wave-induced near-bed shear stress, seabed slope and rugosity. Much of the detected change was at the boundary between bedrock and unconsolidated sediment due to sedimentation and erosion burying or exhuming bedrock, respectively. In a number of cases, however, the change in seabed character was apparently due to changes in sediment grain size when scour exposed what appeared to be an underlying coarser-grained lag or the burial of coarser-grained sand and gravel by fine-grained sand. These findings suggest that, in some places, (a) burial and exhumation of nearshore bedrock reefs along rocky, energetic inner shelves occurs over seasonal timescales and appears related to intrinsic factors such as seabed morphology and extrinsic factors such as wave forces, and (b) single acoustic surveys typically employed for geologic characterization and/or habitat mapping may not adequately characterize the geomorphologic and sedimentologic nature of these types of environments that typify most of the Pacific Ocean and up to 50% of the world's coastlines.

Monterey Bay↗