Development of an integrated survey design to assess invasive round goby abundance and distribution across gradients in substrate and depth
No abstract available.
Conference Paper↗
Geology topics
Stephen C. Riley
Publications and source records attributed to Stephen C. Riley.
Large-scale changes in bloater growth and condition in Lake Huron
Native Bloaters Coregonus hoyi have exhibited multiple strong year-classes since 2005 and now are the most abundant benthopelagic offshore prey fish in Lake Huron, following the crash of nonnative Alewives Alosa pseudoharengus and substantial declines in nonnative Rainbow Smelt Osmerus mordax . Despite recent recoveries in Bloater abundance, marketable-size (>229 mm) Bloaters remain scarce. We used annual survey data to assess temporal and spatial dynamics of Bloater body condition and lengths at age in the main basin of Lake Huron from 1973 to 2014. Basinwide lengths at age were modeled by cohort for the 1973–2003 year-classes using a von Bertalanffy growth model with time-varying Brody growth coefficient ( k ) and asymptotic length ( ) parameters. Median Bloater weights at selected lengths were estimated to assess changes in condition by modeling weight–length relations with an allometric growth model that allowed growth parameters to vary spatially and temporally. Estimated Bloater lengths at age declined 14–24% among ages 4–8 for all year-classes between 1973 and 2004. Estimates of declined from a peak of 394 mm (1973 year-class) to a minimum of 238 mm (1998 year-class). Observed mean lengths at age in 2014 were at all-time lows, suggesting that year-classes comprising the current Bloater population would have to follow growth trajectories unlike those characterizing the 1973–2003 year-classes to attain marketable size. Furthermore, estimated weights of 250-mm Bloaters (i.e., a large, commercially valuable size-class) declined 17% among all regions from 1976 to 2007. Decreases in body condition of large Bloaters are associated with lower lipid content and may be linked to marked declines in abundance of the amphipods Diporeia spp. in Lake Huron. We hypothesize that since at least 1976, large Bloaters have become more negatively buoyant and may have incurred an increasingly greater metabolic cost performing diel vertical migrations to prey upon the opossum shrimp Mysis diluviana and zooplankton.
Lake Huron↗
Identification of lake trout Salvelinus namaycush spawning habitat in northern Lake Huron using high-resolution satellite imagery
The availability and quality of spawning habitat may limit lake trout recovery in the Great Lakes, but little is known about the location and characteristics of current spawning habitats. Current methods used to identify lake trout spawning locations are time- and labor-intensive and spatially limited. Due to the observation that some lake trout spawning sites are relatively clean of overlaying algae compared to areas not used for spawning, we suspected that spawning sites could be identified using satellite imagery. Satellite imagery collected just before and after the spawning season in 2013 was used to assess whether lake trout spawning habitat could be identified based on its spectral characteristics. Results indicated that Pléiades high-resolution multispectral satellite imagery can be successfully used to estimate algal coverage of substrates and temporal changes in algal coverage, and that models developed from processed imagery can be used to identify potential lake trout spawning sites based on comparison of sites where lake trout eggs were and were not observed after spawning. Satellite imagery is a potential new tool for identifying lake trout spawning habitat at large scales in shallow nearshore areas of the Great Lakes.
Lake Huron↗
Spawning site fidelity of wild and hatchery lake trout ( Salvelinus namaycush ) in northern Lake Huron
Fidelity to high-quality spawning sites helps ensure that adults repeatedly spawn at sites that maximize reproductive success. Fidelity is also an important behavioural characteristic to consider when hatchery-reared individuals are stocked for species restoration, because artificial rearing environments may interfere with cues that guide appropriate spawning site selection. Acoustic telemetry was used in conjunction with Cormack–Jolly–Seber capture–recapture models to compare degree of spawning site fidelity of wild and hatchery-reared lake trout ( Salvelinus namaycush ) in northern Lake Huron. Annual survival was estimated to be between 77% and 81% and did not differ among wild and hatchery males and females. Site fidelity estimates were high in both wild and hatchery-reared lake trout (ranging from 0.78 to 0.94, depending on group and time filter), but were slightly lower in hatchery-reared fish than in wild fish. The ecological implication of the small difference in site fidelity between wild and hatchery-reared lake trout is unclear, but similarities in estimates suggest that many hatchery-reared fish use similar spawning sites to wild fish and that most return to those sites annually for spawning.
Canadian Journal of Fisheries and Aquatic Sciences↗
Misapplied survey data and model uncertainty result in incorrect conclusions about the role of predation on alewife population dynamics in Lake Huron: a comment on He et al. (2015)
Drastic recent and ongoing changes to fish populations and food webs in the Great Lakes have been well-described ( Riley et al. 2008 ; Barbiero et al. 2009 ; Nalepa et al. 2009 ; Fahnenstiel et al. 2010 ; Evans et al. 2011 ; Gobin et al. 2015 ), and uncertainty regarding their potential effects on fisheries has caused concern among scientists and fishery managers (e.g., Dettmers et al. 2012 ). In particular, the relative importance of “bottom-up” (e.g., lower trophic level changes) versus “top-down” (e.g., predation) factors to fish community changes in the Great Lakes have been widely debated (e.g., Barbiero et al. 2011 ; Eshenroder and Lantry 2012 ; Bunnell et al. 2014 ). In Lake Huron, recent ecosystem changes have been particularly profound, and populations of alewife ( Alosa pseudoharengus ), an offshore pelagic prey fish, collapsed in 2003 and have yet to recover ( Riley et al. 2008 , 2014 ). He et al. (2015) recently used a series of linked ecological models to assess the role of predation in the dynamics of the offshore prey fish community in Lake Huron. While we believe that they provide a novel method for combining bioenergetics and stock assessment modeling, we question the validity of their conclusions because of the misapplication of survey data and the lack of critical interpretation of their modeling efforts. Here we describe how He et al. (2015) have misapplied bottom trawl data from Lake Huron, and we provide examples of how this has resulted in erroneous conclusions regarding the importance of predation to the population dynamics and collapse of alewife in Lake Huron.
Canadian Journal of Fisheries and Aquatic Sciences↗
Factors associated with the deposition of Cladophora on Lake Michigan beaches in 2012
Deposition of the macroalgae Cladophora spp. was monitored on 18 beaches around Lake Michigan during 2012 at a high temporal frequency. We observed a high degree of spatial variability in Cladophora deposition among beaches on Lake Michigan, even within local regions, with no clear regional pattern in the intensity of Cladophora deposition. A strong seasonal pattern in Cladophora deposition was observed, with the heaviest deposition occurring during mid-summer. Several beaches exhibited high temporal variability in Cladophora deposition over short time scales, suggesting that drifting algal mats may be extremely dynamic in nearshore environments of the Great Lakes. Cladophora deposition on Lake Michigan beaches was primarily related to the presence of nearshore structures, local population density, and nearshore bathymetry. There was relatively little evidence that waves, winds, or currents were associated with Cladophora deposition on beaches, but this may be due to the relatively poor resolution of existing nearshore hydrodynamic data. Developing a predictive understanding of beach-cast Cladophora dynamics in Great Lakes environments may require both intensive Cladophora monitoring and fine-scale local hydrodynamic modeling efforts.
Illinois, Indiana, Michigan, Wisconsin↗
Status and trends of the Lake Huron offshore demersal fish community, 1976-2012
The USGS Great Lakes Science Center has conducted trawl surveys to assess annual changes in the offshore demersal fish community of Lake Huron since 1973. Sample sites include five ports in U.S. waters with less frequent sampling near Goderich, Ontario. The 2012 fall bottom trawl survey was carried out between 20 October – 5 November 2012 and included all U.S. ports as well as Goderich, ON. The 2012 main basin prey fish biomass estimate for Lake Huron was 97 kilotonnes, higher than the estimate in 2011 (63.2 Kt), approximately one third of the maximum estimate in the time series, and nearly 6 times higher than the minimum estimate in 2009. The biomass estimates for adult alewife in 2012 were higher than 2011, but remained much lower than observed before the crash in 2004, and populations were dominated by small fish. Estimated biomass of rainbow smelt also increased and was the highest observed since 2005. Estimated adult bloater biomass in Lake Huron has been increasing in recent years, and the 2012 biomass estimate was the third highest ever observed in the survey. Biomass estimates for trout-perch and ninespine stickleback were higher than in 2011 but still remained low compared to historic estimates. The estimated biomass of deepwater and slimy sculpins increased over 2011, and slimy sculpin in particular seem to be increasing in abundance. The 2012 biomass estimate for round goby was similar to that in 2011 and was the highest observed in the survey. Substantial numbers of wild juvenile lake trout were captured again in 2012, suggesting that natural reproduction by lake trout continues to occur. The 2012 Lake Huron bottom trawl survey results suggest that several species of offshore demersal fish are beginning to increase in abundance.
Michigan↗
Ecological factors affecting Rainbow Smelt recruitment in the main basin of Lake Huron, 1976-2010
Rainbow Smelt Osmerus mordax are native to northeastern Atlantic and Pacific–Arctic drainages and have been widely introduced throughout North America. In the Great Lakes region, Rainbow Smelt are known predators and competitors of native fish and a primary prey species in pelagic food webs. Despite their widespread distribution, importance as a prey species, and potential to negatively interact with native fish species, there is limited information concerning stock–recruitment relationships for Rainbow Smelt. To better understand recruitment mechanisms, we evaluated potential ecological factors determining recruitment dynamics for Rainbow Smelt in Lake Huron using data from bottom trawl catches. We specifically evaluated influence of stock size, environmental factors (water temperature, lake levels, and precipitation), and salmonine predation on the production of age-0 recruits from 1976 to 2010. Rainbow Smelt recruitment was negatively related to stock size exceeding 10 kg/ha, indicating that compensatory, density-dependent mortality from cannibalism or intraspecific competition was an important factor related to the production of age-0 recruits. Recruitment was positively related to spring precipitation suggesting that the amount of stream-spawning habitat as determined by precipitation was important for the production of strong Rainbow Smelt recruitment. Additionally, density of age-0 Rainbow Smelt was positively related to Lake Trout Salvelinus namaycush abundance. However, spawning stock biomass of Rainbow Smelt, which declined substantially from 1989 to 2010, was negatively associated with Lake Trout catch per effort suggesting predation was an important factor related to the decline of age-2 and older Rainbow Smelt in Lake Huron. As such, we found that recruitment of Rainbow Smelt in Lake Huron was regulated by competition with or cannibalism by older conspecifics, spring precipitation influencing stream spawning habitats, and predation by Lake Trout on age-2 and older Rainbow Smelt.
Great Lakes;Lake Huron↗
New insight into the spawning behavior of lake trout, Salvelinus namaycush , from a recovering population in the Laurentian Great Lakes
Spawning behavior of lake trout, Salvelinus namaycush , is poorly understood, relative to stream-dwelling salmonines. Underwater video records of spawning in a recovering population from the Drummond Island Refuge (Lake Huron) represent the first reported direct observations of lake trout spawning in the Laurentian Great Lakes. These observations provide new insight into lake trout spawning behavior and expand the current conceptual model. Lake trout spawning consisted of at least four distinct behaviors: hovering, traveling, sinking, and gamete release. Hovering is a new courtship behavior that has not been previously described. The apparent concentration of hovering near the margin of the spawning grounds suggests that courtship and mate selection might be isolated from the spawning act (i.e., traveling, sinking, and gamete release). Moreover, we interpret jockeying for position displayed by males during traveling as a unique form of male-male competition that likely evolved in concert with the switch from redd-building to itinerant spawning in lake trout. Unlike previous models, which suggested that intra-sexual competition and mate selection do not occur in lake trout, our model includes both and is therefore consistent with evolutionary theory, given that the sex ratio on spawning grounds is skewed heavily towards males. The model presented in this paper is intended as a working hypothesis, and further revision may become necessary as we gain a more complete understanding of lake trout spawning behavior.
Environmental Biology of Fishes↗
Comparative recruitment dynamics of Alewife and Bloater in Lakes Michigan and Huron
The predictive power of recruitment models often relies on the identification and quantification of external variables, in addition to stock size. In theory, the identification of climatic, biotic, or demographic influences on reproductive success assists fisheries management by identifying factors that have a direct and reproducible influence on the population dynamics of a target species. More often, models are constructed as one-time studies of a single population whose results are not revisited when further data become available. Here, we present results from stock recruitment models for Alewife Alosa pseudoharengus and Bloater Coregonus hoyi in Lakes Michigan and Huron. The factors that explain variation in Bloater recruitment were remarkably consistent across populations and with previous studies that found Bloater recruitment to be linked to population demographic patterns in Lake Michigan. Conversely, our models were poor predictors of Alewife recruitment in Lake Huron but did show some agreement with previously published models from Lake Michigan. Overall, our results suggest that external predictors of fish recruitment are difficult to discern using traditional fisheries models, and reproducing the results from previous studies may be difficult particularly at low population sizes.
Lake Michigan and Lake Huron↗
The effect of adjusting model inputs to achieve mass balance on time-dynamic simulations in a food-web model of Lake Huron
Ecopath with Ecosim (EwE) is a widely used modeling tool in fishery research and management. Ecopath requires a mass-balanced snapshot of a food web at a particular point in time, which Ecosim then uses to simulate changes in biomass over time. Initial inputs to Ecopath, including estimates for biomasses, production to biomass ratios, consumption to biomass ratios, and diets, rarely produce mass balance, and thus ad hoc changes to inputs are required to balance the model. There has been little previous research of whether ad hoc changes to achieve mass balance affect Ecosim simulations. We constructed an EwE model for the offshore community of Lake Huron, and balanced the model using four contrasting but realistic methods. The four balancing methods were based on two contrasting approaches; in the first approach, production of unbalanced groups was increased by increasing either biomass or the production to biomass ratio, while in the second approach, consumption of predators on unbalanced groups was decreased by decreasing either biomass or the consumption to biomass ratio. We compared six simulation scenarios based on three alternative assumptions about the extent to which mortality rates of prey can change in response to changes in predator biomass (i.e., vulnerabilities) under perturbations to either fishing mortality or environmental production. Changes in simulated biomass values over time were used in a principal components analysis to assess the comparative effect of balancing method, vulnerabilities, and perturbation types. Vulnerabilities explained the most variation in biomass, followed by the type of perturbation. Choice of balancing method explained little of the overall variation in biomass. Under scenarios where changes in predator biomass caused large changes in mortality rates of prey (i.e., high vulnerabilities), variation in biomass was greater than when changes in predator biomass caused only small changes in mortality rates of prey (i.e., low vulnerabilities), and was amplified when environmental production was increased. When standardized to mean changes in biomass within each scenario, scenarios when vulnerabilities were low and when fishing mortality was increased explained the most variation in biomass. Our findings suggested that approaches to balancing Ecopath models have relatively little effect on changes in biomass over time, especially when compared to assumptions about how mortality rates of prey change in response to changes in predator biomass. We concluded that when constructing food-web models using EwE, determining the effect of changes in predator biomass on mortality rates of prey should be prioritized over determining the best way to balance the model.
Lake Huron↗
Lake trout in northern Lake Huron spawn on submerged drumlins
Recent observations of spawning lake trout Salvelinus namaycush near Drummond Island in northern Lake Huron indicate that lake trout use drumlins, landforms created in subglacial environments by the action of ice sheets, as a primary spawning habitat. From these observations, we generated a hypothesis that may in part explain locations chosen by lake trout for spawning. Most salmonines spawn in streams where they rely on streamflows to sort and clean sediments to create good spawning habitat. Flows sufficient to sort larger sediment sizes are generally lacking in lakes, but some glacial bedforms contain large pockets of sorted sediments that can provide the interstitial spaces necessary for lake trout egg incubation, particularly if these bedforms are situated such that lake currents can penetrate these sediments. We hypothesize that sediment inclusions from glacial scavenging and sediment sorting that occurred during the creation of bedforms such as drumlins, end moraines, and eskers create suitable conditions for lake trout egg incubation, particularly where these bedforms interact with lake currents to remove fine sediments. Further, these bedforms may provide high-quality lake trout spawning habitat at many locations in the Great Lakes and may be especially important along the southern edge of the range of the species. A better understanding of the role of glacially-derived bedforms in the creation of lake trout spawning habitat may help develop powerful predictors of lake trout spawning locations, provide insight into the evolution of unique spawning behaviors by lake trout, and aid in lake trout restoration in the Great Lakes.
Michigan↗
Status and trends of the Lake Huron offshore Demersal fish community, 1976-2013
The USGS Great Lakes Science Center has conducted trawl surveys to assess annual changes in the offshore demersal fish community of Lake Huron since 1973. Sample sites include five ports in U.S. waters with less frequent sampling near Goderich, Ontario. The 2013 fall bottom trawl survey was carried out between 25 October – 21 November 2013 and included all U.S. ports as well as Goderich, ON. The 2013 main basin prey fish biomass estimate for Lake Huron was 47 kilotonnes, less than half of the estimate in 2012 (97 Kt), and approximately 13 percent of the maximum estimate in the time series. The biomass etimate for YAO alewife in 2013 was lower than in 2012, remained much lower than levels observed before the crash in 2004, and populations were dominated by small fish. Estimated biomass of rainbow smelt also decreased and was the second lowest observed in the time series. Estimated YAO bloater biomass in Lake Huron was also reduced compared to 2012. YOY alewife, rainbow smelt, and bloater abundance and biomass increased over 2012. Biomass estimates for deepwater and slimy sculpins, trout-perch, ninespine stickleback, and round goby in 2013 were lower than in 2012 and remained low compared to historic estimates. Wild juvenile lake trout were captured again in 2013, suggesting that natural reproduction by lake trout continues to occur.
Report↗
Changing ecosystem dynamics in the Laurentian Great Lakes: Bottom-up and top-down regulation
Understanding the relative importance of top-down and bottom-up regulation of ecosystem structure is a fundamental ecological question, with implications for fisheries and water-quality management. For the Laurentian Great Lakes, where, since the early 1970s, nutrient inputs have been reduced, whereas top-predator biomass has increased, we describe trends across multiple trophic levels and explore their underlying drivers. Our analyses revealed increasing water clarity and declines in phytoplankton, native invertebrates, and prey fish since 1998 in at least three of the five lakes. Evidence for bottom-up regulation was strongest in Lake Huron, although each lake provided support in at least one pair of trophic levels. Evidence for top-down regulation was rare. Although nonindigenous dreissenid mussels probably have large impacts on nutrient cycling and phytoplankton, their effects on higher trophic levels remain uncertain. We highlight gaps for which monitoring and knowledge should improve the understanding of food-web dynamics and facilitate the implementation of ecosystem-based management.
Illinois, Indiana, Michigan, Minnesota, new York, ↗
The contribution of cold winter temperatures to the 2003 alewife population collapse in Lake Huron
The Lake Huron ecosystem has recently undergone dramatic changes. As part of those changes, the once highly abundant non-native alewife Alosa pseudoharengus population crashed in 2003 and has yet to recover. The purpose of this study was to evaluate whether temperature played a role in the population crash, because historically alewife have been subject to die-off events in response to cold temperatures in other lakes. Long-term climate data (1973–2009) showed that the winter of 2002–2003 exhibited the largest drop in degree days relative to the previous year, had the most extensive average March ice coverage, and was among the coldest years on record. However, since 2003, winter temperatures have not been overly cold, and air temperature has shown an increasing trend. Also, the relationship between temperature and alewife abundance between 1975 and 2006 was non-significant. Therefore, although we found evidence that cold winter temperatures contributed to the abrupt decline of alewife in 2003, they could not explain why the population failed to recover as it had after previous cold winters. Historically, Chinook salmon abundance contributed to long-term trends in alewife abundance, however, we found predation by Chinook to play a lesser role on the 2003 alewife collapse. In the absence of direct estimates of food availability, analyses of alewife length data suggest that a declining prey base altered the ecosystem conditions for alewife, possibly contributing to their collapse and lack of recovery.
Journal of Great Lakes Research↗
Lake trout status in the main basin of Lake Huron, 1973-2010
We developed indices of lake trout Salvelinus namaycush status in the main basin of Lake Huron (1973-2010) to understand increases in the relative abundance of wild year-classes during 1995-2010. Sea lamprey Petromyzon marinus wounds per 100 lake trout declined from 23.63 in 2000 to 5.86-10.64 in 2002-2010. The average age-7 lake trout catch per effort per recruitment (CPE/R; fish•305mof gill net - 1•million stocked yearlings -1 ) increased from 0.56 for the 1973-1990 year-classes to 0.92 for the 1991-2001 year-classes. Total CPE (fish/305 m of gill net) declined from 16.4 fish in 1996 to 4.1 fish in 2010, but the percentage of age-5 and younger lake trout steadily decreased from more than 70% before 1996 to less than 10% by 2009. The modal age in gill-net catches increased from age 5 before 1996 to age 7 by 2005. The average adult CPE increased from 2.8 fish/305 m of gill net during 1978-1995 to 5.34 fish/305 m of gill net during 1996-2010. The 1995-2010 year-classes of wild fish weremore abundant than previous year-classes and were associated with the relatively high adult abundance during 1996-2010. Until the 2002 year-class, there was no decline in age-7 CPE/R; until 2008, there was no decline in adult CPE. Low survival of the 2002 and 2003 year-classes of stocked fish was related to the event of alewife Alosa pseudoharengus population collapse in 2003-2004. Lake trout in the main basin of Lake Huron are undergoing a transition from a hatchery stock to a wild stock, accompanied by an increased uncertainty in delayed recruitment. Future management should pay more attention to the protection of wild recruitment and the abundance of the spawning stock.
Lake Huron↗
Paenibacillus thiaminolyticus is not the cause of thiamine deficiency impeding lake trout ( Salvelinus namaycush ) recruitment in the Great Lakes
Thiamine (vitamin B 1 ) deficiency is a global concern affecting wildlife, livestock, and humans. In Great Lakes salmonines, thiamine deficiency causes embryo mortality and is an impediment to restoration of native lake trout ( Salvelinus namaycush ) stocks. Thiamine deficiency in fish may result from a diet of prey with high levels of thiaminase I. The discoveries that the bacterial species Paenibacillus thiaminolyticus produces thiaminase I, is found in viscera of thiaminase-containing prey fish, and causes mortality when fed to lake trout in the laboratory provided circumstantial evidence implicating P. thiaminolyticus . This study quantified the contribution of P. thiaminolyticus to the total thiaminase I activity in multiple trophic levels of Great Lakes food webs. Unexpectedly, no relationship between thiaminase activity and either the amount of P. thiaminolyticus thiaminase I protein or the abundance of P. thiaminolyticus cells was found. These results demonstrate that P. thiaminolyticus is not the primary source of thiaminase activity affecting Great Lakes salmonines and calls into question the long-standing assumption that P. thiaminolyticus is the source of thiaminase in other wild and domestic animals.
Great Lakes↗
Increasing thiamine concentrations in lake trout eggs from Lakes Huron and Michigan coincide with low alewife abundance
Lake trout Salvelinus namaycush in the Laurentian Great Lakes suffer from thiamine deficiency as a result of adult lake trout consuming prey containing thiaminase, a thiamine-degrading enzyme. Sufficiently low egg thiamine concentrations result in direct mortality of or sublethal effects on newly hatched lake trout fry. To determine the prevalence and severity of low thiamine in lake trout eggs, we monitored thiamine concentrations in lake trout eggs from 15 sites in Lakes Huron and Michigan from 2001 to 2009. Lake trout egg thiamine concentrations at most sites in both lakes were initially low and increased over time at 11 of 15 sites, and the proportion of females with egg thiamine concentrations lower than the recommended management objective of 4 nmol/g decreased over time at eight sites. Egg thiamine concentrations at five of six sites in Lakes Huron and Michigan were significantly inversely related to site-specific estimates of mean abundance of alewives Alosa pseudoharengus, and successful natural reproduction of lake trout has been observed in Lake Huron since the alewife population crashed. These results support the hypothesis that low egg thiamine in Great Lakes lake trout is associated with increased alewife abundance and that low alewife abundance may currently be a prerequisite for successful reproduction by lake trout in the Great Lakes.
North American Journal of Fisheries Management↗