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Sasha C. Reed

Publications and source records attributed to Sasha C. Reed.

At least 91 records · Page 5Linked to original sources

Experimental warming and its legacy effects on root dynamics following two hurricane disturbances in a wet tropical forest

Tropical forests are expected to experience unprecedented warming and increases in hurricane disturbances in the coming decades; yet, our understanding of how these productive systems, especially their belowground component, will respond to the combined effects of varied environmental changes remains empirically limited. Here we evaluated the responses of root dynamics (production, mortality, and biomass) to soil and understory warming (+4°C) and after two consecutive tropical hurricanes in our in situ warming experiment in a tropical forest of Puerto Rico: Tropical Responses to Altered Climate Experiment (TRACE). We collected minirhizotron images from three warmed plots and three control plots of 12 m 2 . Following Hurricanes Irma and María in September 2017, the infrared heater warming treatment was suspended for repairs, which allowed us to explore potential legacy effects of prior warming on forest recovery. We found that warming significantly reduced root production and root biomass over time. Following hurricane disturbance, both root biomass and production increased substantially across all plots; the root biomass increased 2.8-fold in controls but only 1.6-fold in previously warmed plots. This pattern held true for both herbaceous and woody roots, suggesting that the consistent antecedent warming conditions reduced root capacity to recover following hurricane disturbance. Root production and mortality were both related to soil ammonium nitrogen and microbial biomass nitrogen before and after the hurricanes. This experiment has provided an unprecedented look at the complex interactive effects of disturbance and climate change on the root component of a tropical forested ecosystem. A decrease in root production in a warmer world and slower root recovery after a major hurricane disturbance, as observed here, are likely to have longer-term consequences for tropical forest responses to future global change.

Puerto Rico

Experimental warming across a tropical forest canopy height gradient reveals minimal photosynthetic and respiratory acclimation

Tropical forest canopies cycle vast amounts of carbon, yet we still have a limited understanding of how these critical ecosystems will respond to climate warming. We implemented in situ leaf-level + 3°C experimental warming from the understory to the upper canopy of two Puerto Rican tropical tree species, Guarea guidonia and Ocotea sintenisii . After approximately 1 month of continuous warming, we assessed adjustments in photosynthesis, chlorophyll fluorescence, stomatal conductance, leaf traits and foliar respiration. Warming did not alter net photosynthetic temperature response for either species; however, the optimum temperature of Ocotea understory leaf photosynthetic electron transport shifted upward. There was no Ocotea respiratory treatment effect, while Guarea respiratory temperature sensitivity ( Q 10 ) was down-regulated in heated leaves. The optimum temperatures for photosynthesis ( T opt ) decreased 3–5°C from understory to the highest canopy position, perhaps due to upper canopy stomatal conductance limitations. Guarea upper canopy T opt was similar to the mean daytime temperatures, while Ocotea canopy leaves often operated above T opt . With minimal acclimation to warmer temperatures in the upper canopy, further warming could put these forests at risk of reduced CO 2 uptake, which could weaken the overall carbon sink strength of this tropical forest.

Plant, Cell, and Environment

Incorporating biogeochemistry into dryland restoration

Dryland degradation is a persistent and accelerating global problem. Although the mechanisms initiating and maintaining dryland degradation are largely understood, returning productivity and function through ecological restoration remains difficult. Water limitation commonly drives slow recovery rates within drylands; however, the altered biogeochemical cycles that accompany degradation also play key roles in limiting restoration outcomes. Addressing biogeochemical changes and resource limitations may help improve restoration efforts within this difficult-to-restore biome. In the present article, we present a synthesis of restoration literature that identifies multiple ways biogeochemical understandings might augment dryland restoration outcomes, including timing restoration around resource cycling and uptake, connecting heterogeneous landscapes, manipulating resource pools, and using organismal functional traits to a restoration advantage. We conclude by suggesting ways to incorporate biogeochemistry into existing restoration frameworks and discuss research directions that may help improve restoration outcomes in the world's highly altered dryland landscapes.

BioScience

Global resorption efficiencies of trace elements in leaves of terrestrial plants

Leaf nutrient resorption is a critical nutrient conservation strategy. Previous studies focus mainly on resorption patterns of macronutrients, but resorption patterns of trace elements remain poorly understood. A meta-analysis was conducted to explore the general patterns of the leaf resorption of eight trace elements [i.e. copper (Cu), molybdenum (Mo), zinc (Zn), boron (B), manganese (Mn), sodium (Na), aluminium (Al) and iron (Fe)], and a macronutrient [i.e. sulphur (S)] using data collected from 53 published studies. Sulphur (49.6%) had the highest average resorption efficiency followed by Cu (30.3%), Mo (29.5%), Zn (19.5%) and B (17.6%). Two structural elements, Na and Mn, were not resorbed, whereas two potentially toxic elements, Al (−55.6%) and Fe (−25.4%), were accumulated in senesced leaves. Both climatic factors and growth types affected leaf nutrient resorption efficiency, but the magnitudes and directions of the effects differed greatly between S and the trace elements. The resorption efficiencies of S, Cu, Mo and Zn decreased as leaf nutrient concentrations increased, but the structural or potentially toxic elements (i.e. B, Mn, Na, Fe and Al) presented no response or opposite trends. Our results provide global mean resorption efficiencies of trace elements for the first time, and highlight that structural and potentially toxic elements have relatively lower or no leaf resorption, which should be fully considered in biogeochemical models.

Functional Ecology

Resistance, resilience, and recovery of dryland soil bacterial communities across multiple disturbances

Dryland ecosystems are sensitive to perturbations and generally slow to recover post disturbance. The microorganisms residing in dryland soils are especially important as they contribute to soil structure and nutrient cycling. Disturbance can have particularly strong effects on dryland soil structure and function, yet the natural resistance and recovery of the microbial components of dryland soils has not been well documented. In this study, the recovery of surface soil bacterial communities from multiple physical and environmental disturbances is assessed. Samples were collected from three field sites in the vicinity of Moab, UT, United States, 6 to 7 years after physical and climate disturbance manipulations had been terminated, allowing for the assessment of community recovery. Additionally, samples were collected in a transect that included three habitat patches: the canopy zone soils under the dominant shrubs, the interspace soils that are colonized by biological soil crusts, and edge soils at the plot borders. Field site and habitat patch were significant factors structuring the bacterial communities, illustrating that sites and habitats harbored unique soil microbiomes. Across the different sites and disturbance treatments, there was evidence of significant bacterial community recovery, as bacterial biomass and diversity were not significantly different than control plots. There was, however, a small number of 16S rRNA gene amplicon sequence variants that distinguished particular treatments, suggesting that legacy effects of the disturbances still remained. Taken together, these data suggest that dryland bacterial communities may possess a previously unappreciated potential to recover within years of the original disturbance.

Frontiers in Microbiology

Five decades of observed daily precipitation reveal longer and more variable drought events across much of the western United States

Multiple lines of evidence suggest climate change will result in increased precipitation variability and consequently more frequent extreme events. These hydroclimatic changes will likely have significant socioecological impacts, especially across water-limited regions. Here we present an analysis of daily meteorological observations from 1976 to 2019 at 337 long-term weather stations distributed across the western United States (US). In addition to widespread warming (0.2 °C ± 0.01°C/decade, daily maximum temperature), we observed trends of reduced annual precipitation (−2.3 ± 1.5 mm/decade) across most of the region, with increasing interannual variability of precipitation. Critically, daily observations showed that extreme-duration drought became more common, with increases in both the mean and longest dry interval between precipitation events (0.6 ± 0.2, 2.4 ± 0.3 days/decade) and greater interannual variability in these dry intervals. These findings indicate that, against a backdrop of warming and drying, large regions of the western US are experiencing intensification of precipitation variability, with likely detrimental consequences for essential ecosystem services.

Geophysical Research Letters

Response to ‘Stochastic and deterministic interpretation of pool models’

We concur with Azizi‐Rad et al. (2021) that it is vital to critically evaluate and compare different soil carbon models, and we welcome the opportunity to further describe the unique contribution of the PROMISE model (Waring et al. 2020) to this literature. The PROMISE framework does share many features with established biogeochemical models, as our original manuscript highlighted in Table 1, and our work builds upon model innovations developed by many different groups, including that of Azizi‐Rad and colleagues. Yet, the PROMISE framework is distinctive due to where it places mechanistic emphasis, and how these mechanisms are formalized in the mathematical model structure.

Global Change Biology

A roadmap for sampling and scaling biological nitrogen fixation in terrestrial ecosystems

Accurately quantifying rates and patterns of biological nitrogen fixation (BNF) in terrestrial ecosystems is essential to characterize ecological and biogeochemical interactions, identify mechanistic controls, improve BNF representation in conceptual and numerical modelling, and forecast nitrogen limitation constraints on future carbon (C) cycling. While many resources address the technical advantages and limitations of different methods for measuring BNF, less systematic consideration has been given to the broader decisions involved in planning studies, interpreting data, and extrapolating results. Here, we present a conceptual and practical road map to study design, study execution, data analysis and scaling, outlining key considerations at each step. We address issues including defining N‐fixing niches of interest, identifying important sources of temporal and spatial heterogeneity, designing a sampling scheme (including method selection, measurement conditions, replication, and consideration of hotspots and hot moments), and approaches to analysing, scaling and reporting BNF. We also review the comparability of estimates derived using different approaches in the literature, and provide sample R code for simulating symbiotic BNF data frames and upscaling. Improving and standardizing study design at each of these stages will improve the accuracy and interpretability of data, define limits of extrapolation, and facilitate broader use of BNF data for downstream applications. We highlight aspects—such as quantifying scales of heterogeneity, statistical approaches for dealing with non‐normality, and consideration of rates versus ecological significance—that are ripe for further development.

Methods in Ecology and Evolution

Muted responses to chronic experimental nitrogen deposition on the Colorado Plateau

Anthropogenic nitrogen (N) deposition is significantly altering both community structure and ecosystem processes in terrestrial ecosystems across the globe. However, our understanding of the consequences of N deposition in dryland systems remains relatively poor, despite evidence that drylands may be particularly vulnerable to increasing N inputs. In this study, we investigated the influence of 7 years of multiple levels of simulated N deposition (0, 2, 5, and 8 kg N ha −1 year −1 ) on plant community structure and biological soil crust (biocrust) cover at three semi-arid grassland sites spanning a soil texture gradient. Biocrusts are a surface community of mosses, lichens, cyanobacteria, and/or algae, and have been shown to be sensitive to N inputs. We hypothesized that N additions would decrease plant diversity, increase abundance of the invasive annual grass Bromus tectorum, and decrease biocrust cover. Contrary to our expectations, we found that N additions did not affect plant diversity or B. tectorum abundance. In partial support of our hypotheses, N additions negatively affected biocrust cover in some years, perhaps driven in part by inter-annual differences in precipitation. Soil inorganic N concentrations showed rapid but ephemeral responses to N additions and plant foliar N concentrations showed no response, indicating that the magnitude of plant and biocrust responses to N fertilization may be buffered by endogenous N cycling. More work is needed to determine N critical load thresholds for plant community and biocrust dynamics in semi-arid systems and the factors that determine the fate of N inputs.

Arizona, Colorado, New Mexico, Utah

Broader impacts for ecologists: Biological soil crust as a model system for education

Biological soil crusts (biocrusts) are a complex community of algae, cyanobacteria, lichens, bryophytes, and assorted bacteria, fungi, archaea, and bacteriophages that colonize the soil surface. Biocrusts are particularly common in drylands and are found in arid and semiarid ecosystems worldwide. While diminutive in size, biocrusts often cover large terrestrial areas, provide numerous ecosystem benefits, enhance biodiversity, and are found in multiple configurations and assemblages across different climate and disturbance regimes. Biocrusts have been a focus of many ecologists, especially those working in semiarid and arid lands, as biocrusts are foundational community members, play fundamental roles in ecosystem processes, and offer rare opportunities to study biological interactions at small and large spatial scales. Due to these same characteristics, biocrusts have the potential to serve as an excellent teaching tool. The purpose of this paper is to demonstrate the utility of biocrust communities as a model system in science education. Functioning as portable, dynamic mini ecosystems, biocrusts can be used to teach about organisms, biodiversity, biotic interactions, abiotic controls, ecosystem processes, and even global change, and can be easy to use in nearly every classroom setup. For example, education principles, such as evolution and adaptation to stress, or structure and function (patterns and processes) can be applied by bringing biocrusts into the classroom as a teaching tool. In addition, discussing the utility of biocrusts in the classroom – including theory, hypothesis testing, experimentation, and hands-on learning – this document also provides tips and resources for developing education tools and activities geared toward impactful learning.

Frontiers in Microbiology

Only sun-lit leaves of the uppermost canopy exceed both air temperature and photosynthetic thermal optima in a wet tropical forest

Tropical forests have evolved under relatively narrow temperature regimes, and therefore may be more susceptible to climatic change than forests in higher latitudes. Recent evidence shows that lowland tropical forest canopies may already be exceeding thermal maxima for photosynthesis. Height can strongly influence both the microclimate and physiology of forest canopy foliage, yet vertical trends in canopy micrometeorology are rarely examined in tropical forests. To improve our understanding of how climatological and micrometeorological conditions affect tropical tree function, we assessed vertical gradients of photosynthetic photon flux density, vapor pressure deficit, air temperature, leaf temperature, and the difference between leaf and air temperature (ΔT) in a Puerto Rican tropical wet forest. Both air temperature and vapor pressure deficit increased linearly with height. Leaf temperature, however, did not significantly differ across the shaded foliage from 0-16 m, while the uppermost layer (20 m) was up to 4°C hotter than the rest of the foliage and up to 5°C hotter than air temperature at the highest radiation intensity. As a result, leaf temperatures in the shaded middle canopy and understory showed nearly poikilothermic behavior (i.e., leaf temperatures = air temperature), while the uppermost canopy strata showed megathermic behavior (i.e., leaf temperatures greater than air temperature), revealing different thermoregulation strategies for sun-lit versus shaded foliage. In addition, the uppermost canopy was the only stratum to exceed mean photosynthetic temperature optima for this site (T opt = 30.2 ± 1.1°C). Because the upper canopy plays a disproportionately large role in whole-forest photosynthesis, continued warming could potentially weaken the tropics’ carbon sink capacity. However, the shaded leaves may be able increase carbon uptake with further warming because they appear to be able to maintain temperatures below photosynthetic optima, possibly with the help of radiation shielding provided by the uppermost canopy layer.

Agricultural and Forest Meteorology

A reporting format for leaf-level gas exchange data and metadata

Leaf-level gas exchange data support the mechanistic understanding of plant fluxes of carbon and water. These fluxes inform our understanding of ecosystem function, are an important constraint on parameterization of terrestrial biosphere models, are necessary to understand the response of plants to global environmental change, and are integral to efforts to improve crop production. Collection of these data using gas analyzers can be both technically challenging and time consuming, and individual studies generally focus on a small range of species, restricted time periods, or limited geographic regions. The high value of these data is exemplified by the many publications that reuse and synthesize gas exchange data, however the lack of metadata and data reporting conventions make full and efficient use of these data difficult. Here we propose a reporting format for leaf-level gas exchange data and metadata to provide guidance to data contributors on how to store data in repositories to maximize their discoverability, facilitate their efficient reuse, and add value to individual datasets. For data users, the reporting format will better allow data repositories to optimize data search and extraction, and more readily integrate similar data into harmonized synthesis products. The reporting format specifies data table variable naming and unit conventions, as well as metadata characterizing experimental conditions and protocols. For common data types that were the focus of this initial version of the reporting format, i.e., survey measurements, dark respiration, carbon dioxide and light response curves, and parameters derived from those measurements, we took a further step of defining required additional data and metadata that would maximize the potential reuse of those data types. To aid data contributors and the development of data ingest tools by data repositories we provided a translation table comparing the outputs of common gas exchange instruments. Extensive consultation with data collectors, data users, instrument manufacturers, and data scientists was undertaken in order to ensure that the reporting format met community needs. The reporting format presented here is intended to form a foundation for future development that will incorporate additional data types and variables as gas exchange systems and measurement approaches advance in the future. The reporting format is published in the U.S. Department of Energy's ESS-DIVE data repository, with documentation and future development efforts being maintained in a version control system.

Ecological Informatics

Plant growth and biocrust-fire interactions across five North American deserts

Biological soil crusts (biocrusts) are communities predominately comprised of lichens, bryophytes, fungi, algae, and cyanobacteria that form at the soil surface in dryland ecosystems worldwide. Biocrusts can influence the vascular plant community by altering surface hydrology, nutrient cycling, and the availability of microsites suitable for germination. Fire frequency has increased in many dryland systems, but the potential impacts of fire on biocrust-plant interactions remains unclear. Our study explores how biocrusts and the heating associated with fire affect plant growth across five North American desert sites: the Chihuahuan, Colorado Plateau, Great Basin, Mojave, and Sonoran. Using field-collected biocrusts and mineral soil samples from each of these five deserts, we investigated soil biogeochemical differences and the implications of soil heating and biocrust cover on greenhouse grown Elymus elymoides plants. Results showed plant biomass and leaf production were largely determined by the desert where soils originated, and that the soils collected from the Great Basin site, whether heated or not, were generally higher in nutrients and distinct from the other North American desert sites. In contrast, the Chihuahuan site was lower in nutrients and plant biomass growth compared with the other desert sites. In the short term, biocrusts and heating did not significantly affect the biogeochemical profile of individual desert site soils. However, biocrusts and soil heating positively influenced plant growth, and the combination of these factors influenced plants more strongly than either factor considered separately. These findings highlight the importance of biocrusts in mediating resources and suggest additional mechanisms through which fire may alter or accentuate dynamics between biocrusts and vascular plants.

Arizona, Colorado, New Mexico, Nevada

Responses of soil extracellular enzyme activities and bacterial community composition to seasonal stages of drought in a semiarid grassland

Extreme drought can strongly impact belowground communities and biogeochemical processes, including soil microbial community composition and extracellular enzyme activities (EEAs), which are considered key agents in ecosystem carbon (C) and nutrient cycling. However, our understanding of how seasonal timing of drought during the growing season affects soil microbial communities and their activity remains notably poor. In this study, we investigated the responses of soil physicochemical properties, EEAs, and bacterial community composition to extreme-duration drought imposed in the early-, mid-, or late-stages of the growing season in a semiarid grassland ecosystem in Inner Mongolia, China. Compared with the ambient control, the activities of C-, nitrogen (N)-, and phosphorus (P)-acquisition enzymes were significantly decreased in the mid- and/or late-stages of drought. Bacterial community diversity also significantly decreased in the mid- and late-stage drought treatments. Soil water content was the most important factor explaining changes in soil EEAs and bacterial community composition. At the end of the growing season, the activities of C-, N-, and P-acquisition enzymes had mostly recovered, while the bacterial community diversity in the mid- and late-stage drought treatments was still lower than the ambient control. Overall, our study demonstrates that the effects of extreme drought on soil EEAs and bacterial community composition depend on the timing of drought. Our results highlight that understanding the effects of extreme-duration drought at different stages of the growing season may play a vital role in predicting the responses of belowground function to global changes in grassland ecosystems.

Geoderma

Coexistence of multiple leaf nutrient resorption strategies in a single ecosystem

Leaf resorption is critical for considerations of how plants use and recycle nutrients, but fundamental unknowns remain regarding the controls over plant nutrient resorption. Empirical studies suggest at least three basic types of resorption control, including (i) stoichiometric control, (ii) nutrient limitation control, and (iii) nutrient concentration control strategies. However, which strategies are adopted in given conditions and whether multiple strategies coexist in an ecosystem are still open questions. To address these unknowns, leaf nitrogen (N) and phosphorus (P) resorption efficiency (NRE and PRE) and proficiency were measured for seven woody species at a nutrient-rich but potentially N-limited secondary forest and a nutrient-poor and potentially P-limited secondary forest. NRE was higher in the N-limited forest while PRE was higher in the P-limited forest, suggesting that plants responded to nutrient limitation with preferential resorption of the more limiting nutrient. NRE:PRE was positively related to leaf N:P ratios within each forest, demonstrating a role for stoichiometric control. Nutrient concentration controls were also found, with higher nutrient resorption proficiency in the nutrient-poor forest than in the nutrient-rich forest. The controls of stoichiometry and nutrient concentration were community-wide, but the nutrient limitation control was species-specific. Our results highlight the coexistence of multiple nutrient resorption strategies in a single ecosystem, and suggest these strategies are scale-dependent.

Science of the Total Environment

Warming and microbial uptake influence the fate of added soil carbon across a Hawai'ian weathering gradient

Tropical forest soils contain some of the largest carbon (C) stocks on Earth, yet the effects of warming on the fate of fresh C entering tropical soils are still poorly understood. This research sought to understand how the fate of fresh C entering soils is influenced by warming, soil weathering status, and C chemistry. We hypothesized that compounds that are quickly incorporated into microbial biomass (i.e., greater C use efficiency [CUE]) subsequently have longer-term (255 days) retention in soil. We also hypothesized that relatively weathered soils with greater sorptive capacity also retain more fresh C in the short and longer-terms, and that C in these soils is more resistant to weathering loss compared with less weathered soils. We tested these hypotheses by adding two 13 C-labeled compounds (glucose and glycine) to three tropical forest soils from a weathering gradient in Hawai'i, and then incubating soils at ambient (16 °C), +5 °C, and +10 °C for 255 days. We found that 255-day 13 C retention in mineral soil across sites and temperatures was best predicted by two factors: initial retention of 13 C in mineral soil and initial microbial 13 CUE (Adjusted R 2 = 0.78). Carbon compound type influenced 13 C initial retention, with greater glucose- 13 C retention versus glycine- 13 C retention in mineral soils and microbial biomass, corresponding to greater glucose- 13 C retention in soil at 255 days. Warming had a negative longer-term effect on the retention of 13 C only in the least-weathered soil, supporting our hypothesis. These results show that initial retention of fresh C in soils via mineral sorption and microbial uptake is a strong predictor of longer-term retention, indicating that immediate C losses are a major hurdle for soil C storage. Also, retention of fresh C appears most sensitive to warming in less-weathered tropical soils, supporting the idea that mineral sorption may provide some protections against warming. Understanding the interaction between soil sorptive properties and warming for C cycling could improve predictions of forest-climate feedbacks for tropical regions.

Soil Biology and Biochemistry

Supporting the development and use of native plant materials for restoration on the Colorado Plateau (Fiscal Year 2020 Report)

A primary focus of the Colorado Plateau Native Plant Program (CPNPP) is to identify and develop appropriate native plant materials (NPMs) for current and future restoration projects. Multiple efforts have characterized the myriad challenges inherent in providing appropriate seed resources to enable effective, widespread restoration and have identified a broad suite of research activities to provide the information necessary to overcome those challenges (e.g., Plant Conservation Alliance 2015; Breed et al. 2018; Winkler et al. 2018). Many of the most complex information needs relate to identifying the appropriate sources of plant species that can successfully establish in dryland environments, like the Colorado Plateau, where precipitation is generally low and highly variable. Providing this information requires synergistic research efforts that build upon insight gained from earlier investigations. The U.S. Geological Survey (USGS) Southwest Biological Science Center’s (SBSC’s) research activities that supported CPNPP in FY20 followed the FY20 Statement of Work to support a research framework that is continually adapting based on the needs of the restoration community and results from previous investigations; the long-term research framework is outlined in the 2019-2023 5-Year Research Strategy (hereafter referred to as the 5-year plan). This research framework provides support for the National Seed Strategy for Rehabilitation and Restoration (Plant Conservation Alliance, 2015), Department of Interior Secretarial Order #3347 ( Conservation Stewardship and Outdoor Recreation ), and Bureau of Land Management Leadership Priority #1 ( Create a conservation stewardship legacy second only to Teddy Roosevelt ). Research activities in FY20 centered on landscape genomics, implementing a common garden experiment near Vernal, UT, conducting experimental treatments using the GRID (Germination for Restoration Information and Decision-making) framework, and collecting seeds and leaf tissues in the field in preparation for future experiments. These activities were supported by five biological science technicians. The SARS-CoV-2 pandemic delayed some aspects of the FY20 workplan, especially for contract laboratory services and the construction of the GRID garden in Flagstaff, AZ. However, goals were largely met, and the overall progress of research remains on track with respect to the 5-year plan. While Dr. Rob Massatti was the only scientist supported by the SBSC-CPNPP agreement in FY20, other scientists, including Drs. John Bradford, Seth Munson, Mike Duniway, Sasha Reed, Matt Jones, and Daniel Winkler, spent a considerable amount of time providing expertise and support for individual projects. Work activities performed in support of each goal are discussed in turn.

Arizona, Colorado, New Mexico, Utah