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S. Newman

Publications and source records attributed to S. Newman.

14 recordsLinked to original sources

A new method for discovering behavior patterns among animal movements

Advanced satellite tracking technologies enable biologists to track animal movements at fine spatial and temporal scales. The resultant data present opportunities and challenges for understanding animal behavioral mechanisms. In this paper, we develop a new method to elucidate animal movement patterns from tracking data. Here, we propose the notion of continuous behavior patterns as a concise representation of popular migration routes and underlying sequential behaviors during migration. Each stage in the pattern is characterized in terms of space (i.e., the places traversed during movements) and time (i.e. the time spent in those places); that is, the behavioral state corresponding to a stage is inferred according to the spatiotemporal and sequential context. Hence, the pattern may be interpreted predictably. We develop a candidate generation and refinement framework to derive all continuous behavior patterns from raw trajectories. In the framework, we first define the representative spots to denote the underlying potential behavioral states that are extracted from individual trajectories according to the similarity of relaxed continuous locations in certain distinct time intervals. We determine the common behaviors of multiple individuals according to the spatiotemporal proximity of representative spots and apply a projection-based extension approach to generate candidate sequential behavior sequences as candidate patterns. Finally, the candidate generation procedure is combined with a refinement procedure to derive continuous behavior patterns. We apply an ordered processing strategy to accelerate candidate refinement. The proposed patterns and discovery framework are evaluated through conceptual experiments on both real GPS-tracking and large synthetic datasets.

International Journal of Geographical Information

Sensitivity of leaf size and shape to climate: Global patterns and paleoclimatic applications

Paleobotanists have long used models based on leaf size and shape to reconstruct paleoclimate. However, most models incorporate a single variable or use traits that are not physiologically or functionally linked to climate, limiting their predictive power. Further, they often underestimate paleotemperature relative to other proxies. Here we quantify leaf–climate correlations from 92 globally distributed, climatically diverse sites, and explore potential confounding factors. Multiple linear regression models for mean annual temperature (MAT) and mean annual precipitation (MAP) are developed and applied to nine well‐studied fossil floras. We find that leaves in cold climates typically have larger, more numerous teeth, and are more highly dissected. Leaf habit (deciduous vs evergreen), local water availability, and phylogenetic history all affect these relationships. Leaves in wet climates are larger and have fewer, smaller teeth. Our multivariate MAT and MAP models offer moderate improvements in precision over univariate approaches (± 4.0 vs 4.8°C for MAT) and strong improvements in accuracy. For example, our provisional MAT estimates for most North American fossil floras are considerably warmer and in better agreement with independent paleoclimate evidence. Our study demonstrates that the inclusion of additional leaf traits that are functionally linked to climate improves paleoclimate reconstructions. This work also illustrates the need for better understanding of the impact of phylogeny and leaf habit on leaf–climate relationships.

New Phytologist

Biogeochemical processes on tree islands in the greater everglades: Initiating a new paradigm

Scientists’ understanding of the role of tree islands in the Everglades has evolved from a plant community of minor biogeochemical importance to a plant community recognized as the driving force for localized phosphorus accumulation within the landscape. Results from this review suggest that tree transpiration, nutrient infiltration from the soil surface, and groundwater flow create a soil zone of confluence where nutrients and salts accumulate under the head of a tree island during dry periods. Results also suggest accumulated salts and nutrients are flushed downstream by regional water flows during wet periods. That trees modulate their environment to create biogeochemical hot spots and strong nutrient gradients is a significant ecological paradigm shift in the understanding of the biogeochemical processes in the Everglades. In terms of island sustainability, this new paradigm suggests the need for distinct dry-wet cycles as well as a hydrologic regime that supports tree survival. Restoration of historic tree islands needs further investigation but the creation of functional tree islands is promising.

Florida

Ruddy Shelduck Tadorna ferruginea home range and habitat use during the non-breeding season in Assam, India

India is an important non-breeding ground for migratory waterfowl in the Central Asian Flyway. Millions of birds visit wetlands across the country, yet information on their distribution, abundance, and use of resources is rudimentary at best. Limited information suggests that populations of several species of migratory ducks are declining due to encroachment of wetland habitats largely by agriculture and industry. The development of conservation strategies is stymied by a lack of ecological information on these species. We conducted a preliminary assessment of the home range and habitat use of Ruddy Shelduck Tadorna ferruginea in the northeast Indian state of Assam. Seven Ruddy Shelducks were fitted with solar-powered Global Positioning System (GPS) satellite transmitters, and were tracked on a daily basis during the winter of 2009-2010. Locations from all seven were used to describe habitat use, while locations from four were used to quantify their home range, as the other three had too few locations (< 30) for home range estimation. A Brownian Bridge Movement Model (BBMM), used to estimate home ranges, found that the Ruddy Shelduck had an average core use area (i.e. the contour defining 50% of positions) of 40 km 2 (range = 22-87 km 2 ) and an average home range (95% contour) of 610 km 2 (range = 222-1,550 km 2 ). Resource Selection Functions (RSF), used to describe habitat use, showed that the birds frequented riverine wetlands more than expected, occurred on grasslands and shrublands in proportion to their availability, and avoided woods and cropland habitats. The core use areas for three individuals (75%) were on the Brahmaputra River, indicating their preference for riverine habitats. Management and protection of riverine habitats and nearby grasslands may benefit conservation efforts for the Ruddy Shelduck and waterfowl species that share these habitats during the non-breeding season.

Assam

Spatial dynamics of bar-headed geese migration in the context of H5N1

Virulent outbreaks of highly pathogenic avian influenza (HPAI) since 2005 have raised the question about the roles of migratory and wild birds in the transmission of HPAI. Despite increased monitoring, the role of wild waterfowl as the primary source of the highly pathogenic H5N1 has not been clearly established. The impact of outbreaks of HPAI among species of wild birds which are already endangered can nevertheless have devastating consequences for the local and non-local ecology where migratory species are established. Understanding the entangled dynamics of migration and the disease dynamics will be key to prevention and control measures for humans, migratory birds and poultry. Here, we present a spatial dynamic model of seasonal migration derived from first principles and linking the local dynamics during migratory stopovers to the larger scale migratory routes. We discuss the effect of repeated epizootic at specific migratory stopovers for bar-headed geese ( Anser indicus ). We find that repeated deadly outbreaks of H5N1 on stopovers during the autumn migration of bar-headed geese could lead to a larger reduction in the size of the equilibrium bird population compared with that obtained after repeated outbreaks during the spring migration. However, the opposite is true during the first few years of transition to such an equilibrium. The age-maturation process of juvenile birds which are more susceptible to H5N1 reinforces this result.

Journal of the Royal Society Interface

NMR and mass spectrometry of phosphorus in wetlands

There is at present little information on the long-term stability of phosphorus sequestered in wetlands. Phosphorus sequestered during high loading periods may be relatively unstable and easily remobilized following changes in nutrient status or hydrological regime, but the chemical forms of sequestered phosphorus that do remobilize are largely unknown at this time. A lack of suitable analytical techniques has contributed to this dearth of knowledge regarding the stability of soil organic phosphorus. We analysed phosphorus in soils from the 'head' of Rescue Strand tree island and an adjacent marsh in the Florida Everglades by 31P nuclear magnetic resonance (NMR) spectroscopy and high-resolution mass spectrometry. Tree islands are important areas of biodiversity within the Everglades and offer a unique opportunity to study phosphorus sequestration because they are exposed to large phosphorus loads and appear to be natural nutrient sinks. The 31P NMR profiling of extracts from surface and sediment samples in the tree island indicates that phosphorus input to Rescue Strand tree island soils is mostly in the form of inorganic ortho-phosphate and is either refractory when deposited or rapidly recycled by the native vegetation into a stable phosphorus pool largely resistant to re-utilization by plants or microbes. Mass spectrometry revealed the presence of inositol hexakisphosphate, a common organic monophosphate ester not previously observed in Everglades' soils. ?? 2008 The Authors.

European Journal of Soil Science

Saturn's icy satellites investigated by Cassini-VIMS. I. Full-disk properties: 350-5100 nm reflectance spectra and phase curves

Saturn's icy satellites are among the main scientific objectives of the Cassini-VIMS (Visual and Infrared Mapping Spectrometer) experiment. This paper contains a first systematic and comparative analysis of the full-disk spectral properties of Dione, Enceladus, Epimetheus, Hyperion, Iapetus, Mimas, Phoebe, Rhea and Tethys as observed by VIMS from July 2004 to June 2005. The disk integrated properties (350-5100 nm reflectance spectra and phase curves at 550-2232 nm) and images of satellites are reported and discussed in detail together with the observed geometry. In general, the spectra in the visible spectral range are almost featureless and can be classified according to the spectral slopes: from the bluish Enceladus and Phoebe to the redder Iapetus, Hyperion and Epimetheus. In the 1000-1300 nm range the spectra of Enceladus, Tethys, Mimas and Rhea are characterized by a negative slope, consistent with a surface largely dominated by water ice, while the spectra of Iapetus, Hyperion and Phoebe show a considerable reddening pointing out the relevant role played by darkening materials present on the surface. In between these two classes are Dione and Epimetheus, which have a flat spectrum in this range. The main absorption bands identified in the infrared are the 1520, 2020, 3000 nm H2O/OH bands (for all satellites), although Iapetus dark terrains show mostly a deep 3000 nm band while the 1520 and 2020 nm bands are very faint. In this spectral range, the Iapetus spectrum is characterized by a strong reddening. The CO2 band at 4260 nm and the Fresnel ice peak around 3100 nm are evident only on Hyperion, Phoebe and Iapetus. The phase curves at 550 and at 2232 nm are reported for all the available observations in the 0??-144?? range; Rhea shows an opposition surge at visible wavelengths in the 0.5??-1.17?? interval. The improvement on the retrieval of the full-disk reflectance spectra can be appreciated by a direct comparison with ground-based telescopic data available from literature. Finally, data processing strategies and recent upgrades introduced in the VIMS-V calibration pipeline (flat-field and destriping-despiking algorithm) are discussed in appendices. ?? 2006 Elsevier Inc. All rights reserved.

Icarus

Composition and physical properties of Enceladus' surface

Observations of Saturn's satellite Enceladus using Cassini's Visual and Infrared Mapping Spectrometer instrument were obtained during three flybys of Enceladus in 2005. Enceladus' surface is composed mostly of nearly pure water ice except near its south pole, where there are light organics, CO2, and amorphous and crystalline water ice, particularly in the region dubbed the "tiger stripes." An upper limit of 5 precipitable nanometers is derived for CO in the atmospheric column above Enceladus, and 2% for NH 3 in global surface deposits. Upper limits of 140 kelvin (for a filled pixel) are derived for the temperatures in the tiger stripes.

Science

The ecological - Societal underpinnings of Everglades restoration

The biotic integrity of the Florida Everglades, a wetland of immense international importance, is threatened as a result of decades of human manipulation for drainage and development. Past management of the system only exacerbated the problems associated with nutrient enrichment and disruption of regional hydrology. The Comprehensive Everglades Restoration Plan (CERP) now being implemented by Federal and State governments is an attempt to strike a balance between the needs of the environment with the complex management of water and the seemingly unbridled economic growth of southern Florida. CERP is expected to reverse negative environmental trends by "getting the water right", but successful Everglades restoration will require both geochemical and hydrologic intervention on a massive scale. This will produce ecological trade-offs and will require new and innovative scientific measures to (1) reduce total phosphorus concentrations within the remaining marsh to 10 ??g/L or lower; (2) quantify and link ecological benefits to the restoration of depths, hydroperiods, and flow velocities; and (3) compensate for ecological, economic, and hydrologic uncertainties in the CERP through adaptive management. ?? The Ecological Society of America.

Conference Paper

VOLATILECALC: A silicate melt-H2O-CO2 solution model written in Visual Basic for excel

We present solution models for the rhyolite-H2O-CO2 and basalt-H2O-CO2 systems at magmatic temperatures and pressures below ~ 5000 bar. The models are coded as macros written in Visual Basic for Applications, for use within MicrosoftR Excel (Office'98 and 2000). The series of macros, entitled VOLATILECALC, can calculate the following: (1) Saturation pressures for silicate melt of known dissolved H2O and CO2 concentrations and the corresponding equilibrium vapor composition; (2) open- and closed-system degassing paths (melt and vapor composition) for depressurizing rhyolitic and basaltic melts; (3) isobaric solubility curves for rhyolitic and basaltic melts; (4) isoplethic solubility curves (constant vapor composition) for rhyolitic and basaltic melts; (5) polybaric solubility curves for the two end members and (6) end member fugacities of H2O and CO2 vapors at magmatic temperatures. The basalt-H2O-CO2 macros in VOLATILECALC are capable of calculating melt-vapor solubility over a range of silicate-melt compositions by using the relationships provided by Dixon (American Mineralogist 82 (1997) 368). The output agrees well with the published solution models and experimental data for silicate melt-vapor systems for pressures below 5000 bar. ?? 2002 Elsevier Science Ltd. All rights reserved.

Computers & Geosciences

Degassing and microlite crystallization during pre-climactic events of the 1991 eruption of Mt. Pinatubo, Philippines

Dacite tephras produced by the 1991 pre-climactic eruptive sequence at Mt. Pinatubo display extreme heterogeneity in vesicularity, ranging in clast density from 700 to 2580 kg m-3. Observations of the 13 surge-producing blasts that preceded the climactic plinian event include radar-defined estimates of column heights and seismically defined eruptive and intra-eruptive durations. A comparison of the characteristics of erupted material, including microlite textures, chemical compositions, and H2O contents, with eruptive parameters suggests that devolatilization-induced crystallization of the magma occurred to a varying extent prior to at least nine of the explosive events. Although volatile loss progressed to the same approximate level in all of the clasts analyzed (weight percent H2O=1.26-1.73), microlite crystallization was extremely variable (0-22%). We infer that syn-eruptive volatile exsolution from magma in the conduit and intra-eruptive separation of the gas phase was facilitated by the development of permeability within magma residing in the conduit. Correlation of maximum microlite crystallinity with repose interval duration (28-262 min) suggests that crystallization occurred primarily intra-eruptively, in response to the reduction in dissolved H2O content that occurred during the preceding event. Detailed textural characterization, including determination of three-dimensional shapes and crystal size distributions (CSD), was conducted on a subset of clasts in order to determine rates of crystal nucleation and growth using repose interval as the time available for crystallization. Shape and size analysis suggests that crystallization proceeded in response to lessening degrees of feldspar supersaturation as repose interval durations increased. We thus propose that during repose intervals, a plug of highly viscous magma formed due to the collapse of vesicular magma that had exsolved volatiles during the previous explosive event. If plug thickness grew proportionally to the square root of time, and if magma pressurization increased during the eruptive sequence, the frequency of eruptive pulses may have been modulated by degassing of magma within the conduit. Dense clasts in surge deposits probably represent plug material entrained by each subsequent explosive event.

Bulletin of Volcanology

Factors influencing cattail abundance in the northern Everglades

Since the early 1900s, the Everglades have been influenced by anthropogenic actions including altered hydrology and increased nutrient loading. In the northern Everglades an apparent effect of these disturbances has been the development and proliferation of dense cattail ( Typha spp. ) stands in areas previously dominated by sawgrass ( Cladium jamaicense Crantz) and sloughs. Cattail cover, soil nutrient concentrations, topography and fire history were determined for the Holey Land and Rotenberger Wildlife Management Areas, located in the northern Everglades. These data were analyzed using multiple regression to assess the relative influence of fire, hydrology and soil nutrients on cattail abundance. Holey Land and Rotenberger were overdrained over recent decades which resulted in soil compaction and nutrient accumulation, illustrated by increased soil bulk densities and elevated nutrient storage. Average bulk densities were 0.13 g cm −3 for Holey Land and 0.22 g cm −3 for Rotenberger. Average total P (TP) stored in the surface 10 cm of soil in Holey Land and Rotenberger were 7 and 13 g m −2 , respectively. In contrast, Everglades soils uninfluenced by nutrient enrichment and with less severe overdrainage have bulk densities of 0.07 g cm −3 and TP storage of 4 g m −2 . Typically, elevated soil P concentrations have been considered a primary factor influencing cattail growth and distribution in the Everglades. With the apparent absence of P limitation in Holey Land and Rotenberger, cattail abundance was influenced by either fire or hydrology. Forty-six percent of the variation of cattail cover in Holey Land was explained by elevation, indicating that increased water depth and duration of flooding have a significant impact on cattail expansion. In Rotenberger, fire was the most influential factor, explaining 57% of the variation in cattail cover. Hydrology was the second most important factor limiting cattail abundance.

Florida

Effects of nutrients and hydroperiod on Typha, Cladium, and Eleocharis: Implications for everglades restoration

The recent expansion of Typha domingensis ( Typha ) into areas of the Everglades previously dominated by Cladium jamaicense ( Cladium ) communities has led to competing hypotheses about the importance of nutrient concentration vs. hydroperiod in controlling the distribution of these species. In this study, experimental mixtures of Typha domingensis , Cladium jamaicense , and Eleocharis interstincta ( Eleocharis ), a member of the Cladium community, were subjected to two levels of nutrient concentration and three contrasting hydroperiods to determine how these variables might affect Typha 's ability to displace the Cladium community. Mixtures of the three species were established in outdoor tanks containing soil from the northern Everglades region where the experiment was conducted. Nutrient treatments consisted of nutrient additions to adjust ambient water concentrations to either 50 μg/L phosphorus (P) or 100 μg/L P plus nitrogen (N). The three hydroperiods were achieved by maintaining water depths within ranges observed in the northern Everglades. Maximum water depths of 15, 30, and 60 cm were established throughout the wet season (May‐November) followed by lowering to 5 cm during the dry season. Over a 2‐yr period, biomass was monitored nondestructively and aboveground material was harvested at the end of the experiment. Analysis of the biomass changes over time showed that differences between the species developed by the end of the first growing season. Typha and Eleocharis had initial growth rates substantially higher than those observed for Cladium . Typha 's growth in mixtures responded positively to both elevated nutrients (by as much as 45%) as well as to increased water depth (by as much as 60%), while Cladium and Eleocharis did not increase in response to these variables. Tissue P concentrations were found to be higher for Typha and Eleocharis than for Cladium under nearly all conditions. Net accumulation of P in Typha shoots was 2‐3 times greater than in the other species. The enhancement of Typha by elevated nutrients and increased flooding is associated with a syndrome of life history characteristics that includes rapid growth rates, high tissue concentrations of P, tall leaves, and a greater response to contrasting environmental conditions. Cladium , in contrast, showed a slow growth rate, low tissue concentrations of P, a greater capacity to resist invasion by Typha in shallow waters, and less of a growth response to contrasting environmental conditions, traits that would seem to be well suited to the nutrient‐poor, hydrologically unstable conditions natural to the Everglades. Results from this study suggest that attempts to limit the spread of Typha should consider hydrologic restoration as well as reduction in surface water nutrients.

Florida

Volcanism in the Sumisu Rift, I. Major element, volatile, and stable isotope geochemistry

A bimodal volcanic suite with K Ar ages of 0.05–1.40 Ma was collected from the Sumisu Rift using alvin . These rocks are contemporaneous with island arc tholeiite lavas of the Izu-Ogasawara arc 20 km to the east, and provide a present day example of volcanism associated with arc rifting and back-arc basin initiation. Major element geochemistry of the basalts is most similar to that of basalts found in other, more mature back-arc basins, which indicates that back-arc basins need not begin their magmatic evolution with lavas bearing strong arc signatures. Volatile concentrations distinguish Sumisu Rift basalts from island arc basalts and MORB. H 2 O contents, which are at least four times greater than in MORB, suppress plagioclase crystallization. This suppression results in a more mafic fractionating assemblage, which prevents Al 2 O 3 depletion and delays the initiation of Fe 2 O 3 (tot) and TiO 2 enrichment. However, unlike arc basalts,Fe 3+/ ΣFe ratios are only slightly higher than in MORB and are insufficient to cause magnetite saturation early enough to suppress Fe 2 O 3 (tot) and TiO 2 enrichment. Thus, major element trends are more similar to those of MORB than arcs. H 2 O, CO 2 and S are undersaturated relative to pure phase solubility curves, indicating exsolution of an H 2 O-rich mixed gas phase. HighH 2 O/S, highδD, and low (MORB-like)δ 34 S ratios are considered primary and distinctive of the back-arc basin setting.

Earth and Planetary Science Letters