Geology topics

Richard A. Erickson

Publications and source records attributed to Richard A. Erickson.

At least 91 records · Page 5Linked to original sources

USGS2017

Estimating linear temporal trends from aggregated environmental monitoring data

Trend estimates are often used as part of environmental monitoring programs. These trends inform managers (e.g., are desired species increasing or undesired species decreasing?). Data collected from environmental monitoring programs is often aggregated (i.e., averaged), which confounds sampling and process variation. State-space models allow sampling variation and process variations to be separated. We used simulated time-series to compare linear trend estimations from three state-space models, a simple linear regression model, and an auto-regressive model. We also compared the performance of these five models to estimate trends from a long term monitoring program. We specifically estimated trends for two species of fish and four species of aquatic vegetation from the Upper Mississippi River system. We found that the simple linear regression had the best performance of all the given models because it was best able to recover parameters and had consistent numerical convergence. Conversely, the simple linear regression did the worst job estimating populations in a given year. The state-space models did not estimate trends well, but estimated population sizes best when the models converged. We found that a simple linear regression performed better than more complex autoregression and state-space models when used to analyze aggregated environmental monitoring data.

Ecological Indicators↗

USGS2017

An integral projection model with YY-males and application to evaluating grass carp control

Invasive fish species disrupt ecosystems and cause economic damage. Several methods have been discussed to control populations of invasive fish including the release of YY-males. YY-males are fish that have 2 male chromosomes compared to a XY-male. When YY-males mate, they only produce male (XY) offspring. This decreases the female proportion of the population and can, in theory, eradicate local populations by biasing the sex-ratio. YY-males have been used as a population control tool for brook trout in montane streams and lakes in Idaho, USA. The YY-male control method has been discussed for grass carp in Lake Erie, North America. We developed and presented an integral projection model for grass carp to model the use of YY-males as a control method for populations in this lake. Using only the YY-male control method, we found that high levels of YY-males would need to be release annually to control the species. Specifically, these levels were the same order of magnitude as the baseline adult population (e.g., 1000 YY-males needed to be released annual for 20 years to control a baseline adult population of 2500 grass carp). These levels may not be reasonable or obtainable for fisheries managers given the impacts of YY-males on aquatic vegetation and other constraints of natural resource management.

Ecological Modelling↗

USGS2017

Seasonal trends in eDNA detection and occupancy of bigheaded carps

Bigheaded carps, which include silver and bighead carp, are threatening to invade the Great Lakes. These species vary seasonally in distribution and abundance due to environmental conditions such as precipitation and temperature. Monitoring this seasonal movement is important for management to control the population size and spread of the species. We examined if environmental DNA (eDNA) approaches could detect seasonal changes of these species. To do this, we developed a novel genetic marker that was able to both detect and differentiate bighead and silver carp DNA. We used the marker, combined with a novel occupancy model, to study the occurrence of bigheaded carps at 3 sites on the Wabash River over the course of a year. We studied the Wabash River because of concerns that carps may be able to use the system to invade the Great Lakes via a now closed (ca. 2017) connection at Eagle Marsh between the Wabash River's watershed and the Great Lakes' watershed. We found seasonal trends in the probability of detection and occupancy that varied across sites. These findings demonstrate that eDNA methods can detect seasonal changes in bigheaded carps densities and suggest that the amount of eDNA present changes seasonally. The site that was farthest upstream and had the lowest carp densities exhibited the strongest seasonal trends for both detection probabilities and sample occupancy probabilities. Furthermore, other observations suggest that carps seasonally leave this site, and we were able to detect this with our eDNA approach.

Journal of Great Lakes Research↗

USGS2017

Responses of invasive silver and bighead carp to a carbon dioxide barrier in outdoor ponds

Resource managers need for effective methods to prevent the movement of silver ( Hypophthalmichthys molitrix ) and bighead carp ( H. nobilis ) from the Mississippi River basin into the Laurentian Great Lakes. In this study, we evaluated dissolved carbon dioxide (CO 2 ) as a barrier and deterrent to silver (278 ± 30.5 mm) and bighead (212 ± 7.7 mm) carp movement in continuous-flow outdoor ponds. As a barrier, CO 2 significantly reduced upstream movement but was not 100% effective at blocking fish passage. As a deterrent, we observed a significant shift away from areas of high CO 2 relative to normal movement before and after injection. Carbon dioxide concentrations varied across the pond during injection and reached maximum concentrations of 74.5±1.9 mg/L CO 2 ; 29 532 – 41 393 µatm at the site of injection during three independent trials. We conclude that CO 2 altered silver and bighead carp movement in outdoor ponds and recommend further research to determine barrier effectiveness during field applications.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2017

Using dissolved carbon dioxide to alter the behavior of invasive round goby

Fisheries managers need effective methods to limit the spread of invasive round goby Neogobius melanostomus in North America. Elevating carbon dioxide (CO 2 ) in water at pinch points of rivers (e.g., inside locks) is one approach showing potential to deter the passage of invasive fishes, such as bigheaded carps Hypophthalmichthys spp., but the effectiveness of this method to alter round goby behavior has not been determined. The goal for this study was to determine CO 2 concentrations that alter round goby behavior across a range of water temperatures. Free-swimming avoidance (voluntary response) and loss of equilibrium (involuntary response) were quantified by exposing round goby to increasing CO 2 concentrations at 5, 15, and 25 °C using a shuttle box choice arena and static tank. Water chemistry was measured concurrent with behavioral endpoints and showed that round goby avoided a threshold of 99–169 mg/L CO 2 (79,000–178,000 µatm) and lost equilibrium at 197–280 mg/L CO 2 (163,000–303,000 µatm). Approximately 50% lower CO 2 concentrations were found to modify behavior at 5 °C relative to 25 °C, suggesting greater effectiveness at lower water temperatures. We conclude that CO 2 modified round goby behavior and concentrations determined in this study are intended to guide field testing of CO 2 as an invasive fish deterrent.

Management of Biological Invasions↗

USGS2016

Effects of wind energy generation and white-nose syndrome on the viability of the Indiana bat

Wind energy generation holds the potential to adversely affect wildlife populations. Species-wide effects are difficult to study and few, if any, studies examine effects of wind energy generation on any species across its entire range. One species that may be affected by wind energy generation is the endangered Indiana bat ( Myotis sodalis ), which is found in the eastern and midwestern United States. In addition to mortality from wind energy generation, the species also faces range-wide threats from the emerging infectious fungal disease, white-nose syndrome (WNS). White-nose syndrome, caused by Pseudogymnoascus destructans , disturbs hibernating bats leading to high levels of mortality. We used a spatially explicit full-annual-cycle model to investigate how wind turbine mortality and WNS may singly and then together affect population dynamics of this species. In the simulation, wind turbine mortality impacted the metapopulation dynamics of the species by causing extirpation of some of the smaller winter colonies. In general, effects of wind turbines were localized and focused on specific spatial subpopulations. Conversely, WNS had a depressive effect on the species across its range. Wind turbine mortality interacted with WNS and together these stressors had a larger impact than would be expected from either alone, principally because these stressors together act to reduce species abundance across the spectrum of population sizes. Our findings illustrate the importance of not only prioritizing the protection of large winter colonies as is currently done, but also of protecting metapopulation dynamics and migratory connectivity.

PeerJ↗

USGS2016

Evaluation of avoidance behavior of tadpole madtoms ( Noturus gyrinus ) as a surrogate for the endangered northern madtom ( Noturus stigmosus ) in response to granular Bayluscide ®

The vertical avoidance behavior of the tadpole madtom ( Noturus gyrinus ) exposed to environmentally relevant concentrations of the granular formulation of the lampricide Bayluscide ® was evaluated. The lampricide formulation (3.2 percent active ingredient coated on a sand granule) is used to control larval sea lamprey populations in the Great Lakes. The tadpole madtom was chosen as a surrogate to the federally endangered northern madtom ( Noturus stigmosus ) based on similar life history characteristics and habitat requirements. Vertical avoidance of tadpole madtoms in response to the granular formulation was documented in clear Plexiglas columns (107 centimeters in height, 30.5 centimeters in diameter) for 1 hour after chemical application. Each avoidance trial produced data consisting of the number of tadpole madtoms avoiding the chemical at a given time. Based on the overall data, tadpole madtoms in treated columns were 11.7 times more likely to display avoidance compared to those in untreated controls. Results indicate that it is likely that northern madtoms will be able to detect and avoid Bayluscide ® from granular applications if their response is similar to that of the tadpole madtom.

Great Lakes↗

USGS2016

Organic contamination in tree swallow ( Tachycineta bicolor ) nestlings at United States and binational great Lakes Areas of Concern

Contaminant exposure of tree swallows, Tachycineta bicolor , nesting in 27 Areas of Concern (AOCs) in the Great Lakes basin was assessed from 2010 to 2014 to assist managers and regulators in their assessments of Great Lakes AOCs. Contaminant concentrations in nestlings from AOCs were compared with those in nestlings from nearby non-AOC sites. Polychlorinated biphenyl (PCB) and polybrominated diphenyl ether concentrations in tree swallow nestling carcasses at 30% and 33% of AOCs, respectively, were below the mean concentration for non-AOCs. Polycyclic aromatic hydrocarbon (PAH) concentrations in nestling stomach contents and perfluorinated compound concentrations in nestling plasma at 67% and 64% of AOCs, respectively, were below the mean concentration for non-AOCs. Concentrations of PCBs in nestling carcasses were elevated at some AOCs but modest compared with highly PCB-contaminated sites where reproductive effects have been documented. Concentrations of PAHs in diet were sufficiently elevated at some AOCs to elicit a measurable physiological response. Among AOCs, concentrations of the perfluorinated compound perfluorooctane sulfonate in plasma were the highest on the River Raisin (MI, USA; geometric mean 330 ng/mL) but well below an estimated toxicity reference value (1700 ng/mL). Both PAH and PCB concentrations in nestling stomach contents and PCBs in carcasses were significantly correlated with concentrations in sediment previously reported, thereby reinforcing the utility of tree swallows to assess bioavailability of sediment contamination.

Environmental Toxicology and Chemistry↗

USGS2016

Detecting the movement and spawning activity of bigheaded carps with environmental DNA

Bigheaded carps are invasive fishes threatening to invade the Great Lakes basin and establish spawning populations, and have been monitored using environmental DNA (eDNA). Not only does eDNA hold potential for detecting the presence of species, but may also allow for quantitative comparisons like relative abundance of species across time or space. We examined the relationships among bigheaded carp movement, hydrography, spawning and eDNA on the Wabash River, IN, USA. We found positive relationships between eDNA and movement and eDNA and hydrography. We did not find a relationship between eDNA and spawning activity in the form of drifting eggs. Our first finding demonstrates how eDNA may be used to monitor species abundance, whereas our second finding illustrates the need for additional research into eDNA methodologies. Current applications of eDNA are widespread, but the relatively new technology requires further refinement.

Molecular Ecology Resources↗

USGS2016

Chesapeake Bay fish–osprey ( Pandion haliaetus ) food chain: Evaluation of contaminant exposure and genetic damage

From 2011 to 2013, a large-scale ecotoxicological study was conducted in several Chesapeake Bay (USA) tributaries (Susquehanna River and flats, the Back, Baltimore Harbor/Patapsco Rivers, Anacostia/ middle Potomac, Elizabeth and James Rivers) and Poplar Island as a mid-Bay reference site. Osprey ( Pandion haliaetus ) diet and the transfer of contaminants from fish to osprey eggs were evaluated. The most bioaccumulative compounds (biomagnification factor > 5) included p,p′ -dichlorodiphenyldichloroethylene (DDE), total polychlorinated biphenyls (PCBs), total polybrominated diphenyl ethers (PBDEs), and bromodiphenyl ether (BDE) congeners 47, 99, 100, and 154. This analysis suggested that alternative brominated flame retardants and other compounds (methoxytriclosan) are not appreciably biomagnifying. A multivariate analysis of similarity indicated that major differences in patterns among study sites were driven by PCB congeners 105, 128, 156, 170/190, and 189, and PBDE congeners 99 and 209. An integrative redundancy analysis showed that osprey eggs from Baltimore Harbor/Patapsco River and the Elizabeth River had high residues of PCBs and p,p ′-DDE, with PBDEs making a substantial contribution to overall halogenated contamination on the Susquehanna and Anacostia/middle Potomac Rivers. The redundancy analysis also suggested a potential relation between PBDE residues in osprey eggs and oxidative DNA damage in nestling blood samples. The results also indicate that there is no longer a discernible relation between halogenated contaminants in osprey eggs and their reproductive success in Chesapeake Bay. Osprey populations are thriving in much of the Chesapeake, with productivity rates exceeding those required to sustain a stable population.

Chesapeake Bay↗

USGS2016

Structure and spatial patterns of macrobenthic community in Tai Lake, a large shallow lake, China

Tai Lake (Chinese: Taihu ), the third-largest freshwater lake in China, suffers from harmful cyanobacteria blooms that are caused by economic development and population growth near the lake. Several studies have focused on phytoplankton in Tai Lake after a drinking water crisis in 2007; however, these studies primarily focused on microcystin bioaccumulation and toxicity to individual species without examining the effects of microcystin on macrobenthic community diversity. In this study, we conducted a survey of the lake to examine the effects of microcystine and other pollutants on marcobenthic community diversity. A totally of forty-nine species of macroinvertebrates were found in Tai Lake. Limnodrilus hoffmeisteri and Corbicula fluminea were the most abundant species. Cluster-analysis and one-way analysis of similarity (ANOSIM) identified three significantly different macrobenthic communities among the sample sites. More specifically, sites in the eastern bays, where aquatic macrophytes were abundant, had the highest diversity of macrobenthic communities, which were dominated by Bellamya aeruginosa , Bellamya purificata , L. hoffmeisteri , and Alocinma longicornis . Sites in Zhushan Bay contained relatively diverse communities, mainly composed of L. hoffmeisteri , C. fluminea , L. claparederanus , R. sinicus , and Cythura sp. Sites in the western region, Meiliang Bay and Wuli Bay had the lowest diversity, mainly composed of L. hoffmeisteri , C. fluminea , Branchiura sowerbyi , and Rhyacodrilus sinicus . In addition, the relationships between macrobenthic metrics (Shannon–Wiener, Margalef, and Pielou) and environmental variables showed that community structure and spatial patterns of macrobenthos in Tai Lake were significantly influenced by chemical oxygen demand (COD Cr ), biochemical oxygen demand (BOD 5 ), lead (Pb), and microcystin-LR (L for leucine and R for arginine). Our findings provide critical information that could help managers and policymakers assess and modify ecological restoration practices.

Tai Lake↗

USGS2016

Safety of the molluscicide Zequanox (R) to nontarget macroinvertebrates Gammarus lacustris (Amphipoda: Gammaridae) and Hexagenia spp. (Ephemeroptera: Ephemeridae)

Zequanox® is a commercial formulation of the killed bacterium, Pseudomonas fluorescens (strain CL145A), that was developed to control dreissenid mussels. In 2014, Zequanox became the second product registered by the United States Environmental Protection Agency (USEPA) for use in open water environments as a molluscicide. Previous nontarget studies demonstrated the safety and selectivity of P. fluorescens CL154A, but the database on the toxicity of the formulation (Zequanox) is limited for macroinvertebrate taxa and exposure conditions. We evaluated the safety of Zequanox to the amphipod Gammarus lacustris lacustris , and nymphs of the burrowing mayfly, Hexagenia spp. at the maximum approved concentration (100 mg/L active ingredient, A.I.) and exposure duration (8 h). Survival of animals was assessed after 8 h of exposure and again at 24 and 96 h post-exposure. Histopathology of the digestive tract of control and treated animals was compared at 96 h post-exposure. The results showed no significant effect of Zequanox on survival of either species. Survival of G. lacustris exceeded 85% in all concentrations at all three sampling time points. Survival of Hexagenia spp. ranged from 71% (control) to 91% at 8 h, 89–93% at 24 h post-exposure, and 70–73% at 96 h post-exposure across all treatments. We saw no evidence of pathology in the visceral organs of treated animals. Our results indicate that application of Zequanox at the maximum approved concentration and exposure duration did not cause significant mortality or treatment-related histopathological changes to G. lacustris and Hexagenia spp.

Management of Biological Invasions↗

USGS2015

Assessing local population vulnerability to wind energy development with branching process models: an application to wind energy development

Quantifying the impact of anthropogenic development on local populations is important for conservation biology and wildlife management. However, these local populations are often subject to demographic stochasticity because of their small population size. Traditional modeling efforts such as population projection matrices do not consider this source of variation whereas individual-based models, which include demographic stochasticity, are computationally intense and lack analytical tractability. One compromise between approaches is branching process models because they accommodate demographic stochasticity and are easily calculated. These models are known within some sub-fields of probability and mathematical ecology but are not often applied in conservation biology and applied ecology. We applied branching process models to quantitatively compare and prioritize species locally vulnerable to the development of wind energy facilities. Specifically, we examined species vulnerability using branching process models for four representative species: A cave bat (a long-lived, low fecundity species), a tree bat (short-lived, moderate fecundity species), a grassland songbird (a short-lived, high fecundity species), and an eagle (a long-lived, slow maturation species). Wind turbine-induced mortality has been observed for all of these species types, raising conservation concerns. We simulated different mortality rates from wind farms while calculating local extinction probabilities. The longer-lived species types (e.g., cave bats and eagles) had much more pronounced transitions from low extinction risk to high extinction risk than short-lived species types (e.g., tree bats and grassland songbirds). High-offspring-producing species types had a much greater variability in baseline risk of extinction than the lower-offspring-producing species types. Long-lived species types may appear stable until a critical level of incidental mortality occurs. After this threshold, the risk of extirpation for a local population may rapidly increase with only minimal increases in wind mortality. Conservation biologists and wildlife managers may need to consider this mortality pattern when issuing take permits and developing monitoring protocols for wind facilities. We also describe how our branching process models may be generalized across a wider range of species for a larger assessment project and then describe how our methods may be applied to other stressors in addition to wind.

Ecosphere↗

USGS2015

Chromosomal damage and EROD induction in tree swallows (Tachycineta bicolor) along the Upper Mississippi River, Minnesota, USA

The health of tree swallows, Tachycineta bicolor, on the Upper Mississippi River (UMR) was assessed in 2010 and 2011 using biomarkers at six sites downriver of Minneapolis/St. Paul, MN metropolitan area, a tributary into the UMR, and a nearby lake. Chromosomal damage was evaluated in nestling blood by measuring the coefficient of variation of DNA content (DNA CV) using flow cytometry. Cytochrome P450 1A activity in nestling liver was measured using the ethoxyresorufin- O -dealkylase (EROD) assay, and oxidative stress was estimated in nestling livers via determination of thiobarbituric acid reacting substances (TBARS), reduced glutathione (GSH), oxidized glutathione (GSSG), the ratio GSSG/GSH, total sulfhydryl, and protein bound sulfhydryl (PBSH). A multilevel regression model (DNA CV) and simple regressions (EROD and oxidative stress) were used to evaluate biomarker responses for each location. Chromosomal damage was significantly elevated at two sites on the UMR (Pigs Eye and Pool 2) relative to the Green Mountain Lake reference site, while the induction of EROD activity was only observed at Pigs Eye. No measures of oxidative stress differed among sites. Multivariate analysis confirmed an increased DNA CV at Pigs Eye and Pool 2, and elevated EROD activity at Pigs Eye. These results suggest that the health of tree swallows has been altered at the DNA level at Pigs Eye and Pool 2 sites, and at the physiological level at Pigs Eye site only.

Minnesota↗

USGS2015

Estimating the short-term recovery potential of little brown bats in the eastern United States in the face of White-nose syndrome

White-nose syndrome (WNS) was first detected in North American bats in New York in 2006. Since that time WNS has spread throughout the northeastern United States, southeastern Canada, and southwest across Pennsylvania and as far west as Missouri. Suspect WNS cases have been identified in Minnesota and Iowa, and the causative agent of WNS ( Pseudogymnoascus destructans ) has recently been detected in Mississippi. The impact of WNS is devastating for little brown bats ( Myotis lucifugus ), causing up to 100% mortality in some overwintering populations, and previous research has forecast the extirpation of the species due to the disease. Recent evidence indicates that remnant populations may persist in areas where WNS is endemic. We developed a spatially explicit model of little brown bat population dynamics to investigate the potential for populations to recover under alternative scenarios. We used these models to investigate how starting population sizes, potential changes in the number of bats overwintering successfully in hibernacula, and potential changes in demographic rates of the population post WNS may influence the ability of the bats to recover to former levels of abundance. We found that populations of the little brown bat and other species that are highly susceptible to WNS are unlikely to return to pre-WNS levels in the near future under any of the scenarios we examined.

Ecological Modelling↗

USGS2015

Preliminary methodology to assess the national and regional impact of U.S. wind energy development on birds and bats

The U.S. Geological Survey has developed a methodology to assess the impacts of wind energy development on wildlife; it is a probabilistic, quantitative assessment methodology that can communicate to decision makers and the public the magnitude of these effects on species populations. The methodology is currently applicable to birds and bats, focuses primarily on the effects of collisions, and can be applied to any species that breeds in, migrates through, or otherwise uses any part of the United States. The methodology is intended to assess species at the national scale and is fundamentally different from existing methods focusing on impacts at individual facilities. Publicly available fatality information, population estimates, species range maps, turbine location data, biological characteristics, and generic population models are used to generate both a ranked list of species based on relative risk as well as quantitative measures of the magnitude of the effect on species' population trend and size. Three metrics are combined to determine direct and indirect relative risk to populations. A generic population model is used to estimate the expected change in population trend and includes additive mortality from collisions with wind turbines. Lastly, the methodology uses observed fatalities and an estimate of potential biological removal to assess the risk of a decline in population size. Data for six bird species have been processed through the entire methodology as a test case, and the results are presented in this report. Components of the methodology are based on simplifying assumptions and require information that, for many species, may be sparse or unreliable. These assumptions are presented in the report and should be carefully considered when using output from the methodology. In addition, this methodology can be used to recommend species for more intensive demographic modeling or highlight those species that may not require any additional protection because effects of wind energy development on their populations are projected to be small.

Scientific Investigations Report↗

USGS2014

Estimating the spatial distribution of wintering little brown bat populations in the eastern United States

Depicting the spatial distribution of wildlife species is an important first step in developing management and conservation programs for particular species. Accurate representation of a species distribution is important for predicting the effects of climate change, land-use change, management activities, disease, and other landscape-level processes on wildlife populations. We developed models to estimate the spatial distribution of little brown bat ( Myotis lucifugus ) wintering populations in the United States east of the 100th meridian, based on known hibernacula locations. From this data, we developed several scenarios of wintering population counts per county that incorporated uncertainty in the spatial distribution of the hibernacula as well as uncertainty in the size of the current little brown bat population. We assessed the variability in our results resulting from effects of uncertainty. Despite considerable uncertainty in the known locations of overwintering little brown bats in the eastern United States, we believe that models accurately depicting the effects of the uncertainty are useful for making management decisions as these models are a coherent organization of the best available information.

Ecology and Evolution↗

USGS2014

BatTool: an R package with GUI for assessing the effect of White-nose syndrome and other take events on Myotis spp. of bats

Background: Myotis species of bats such as the Indiana Bat and Little Brown Bat are facing population declines because of White-nose syndrome (WNS). These species also face threats from anthropogenic activities such as wind energy development. Population models may be used to provide insights into threats facing these species. We developed a population model, BatTool, as an R package to help decision makers and natural resource managers examine factors influencing the dynamics of these species. The R package includes two components: 1) a deterministic and stochastic model that are accessible from the command line and 2) a graphical user interface (GUI). Results: BatTool is an R package allowing natural resource managers and decision makers to understand Myotis spp. population dynamics. Through the use of a GUI, the model allows users to understand how WNS and other take events may affect the population. The results are saved both graphically and as data files. Additionally, R-savvy users may access the population functions through the command line and reuse the code as part of future research. This R package could also be used as part of a population dynamics or wildlife management course. Conclusions: BatTool provides access to a Myotis spp. population model. This tool can help natural resource managers and decision makers with the Endangered Species Act deliberations for these species and with issuing take permits as part of regulatory decision making. The tool is available online as part of this publication.

Source Code for Biology and Medicine↗