Geology topics

Nathaniel P. Hitt

Publications and source records attributed to Nathaniel P. Hitt.

At least 19 recordsLinked to original sources

USGS2025

Tracking status and trends in seven key indicators of river and stream condition in the Chesapeake Bay watershed

Freshwater streams and rivers are recognized as vital habitats within the Chesapeake Bay watershed, which has been undergoing extensive restoration efforts for more than 30 years. Resource managers need to understand stream and river condition and how these conditions are changing over time to determine whether regional long-term restoration and conservation goals are being met. The objective of this report was to document the spatial and temporal variability of conditions for seven indicators of river and stream health across the nontidal Chesapeake Bay watershed. The framework for the U.S. Geological Survey’s Nontidal Network (NTN), a network of more than 100 nutrient and suspended sediment monitoring locations, was extended to assess conditions for six additional indicators of stream health: temperature, salinity, toxic contaminants, streamflow, hydromorphology, and biological aquatic communities. For each indicator, the latest available data from multiple sources were compiled and harmonized, and key metrics were identified to describe indicator conditions across space and time. A status condition was defined for each indicator to describe overall spatial variability in recent condition, and trend analyses were used to describe changes in each indicator metric over time. The analysis revealed clear differences in spatial and temporal data coverage across the seven indicators, so individual indicator trend analyses were not constrained to a common time interval. However, a status snapshot was conducted across all indicators for the 2015–17 period to simultaneously explore spatial variability across all indicators. The status snapshot highlighted general degraded conditions across multiple indicators in large metropolitan regions, such as the Baltimore–Washington, D.C., metropolitan area. Regression analysis between indicator status metrics and major land cover for the sites suggest urbanization as a potential driver of degraded conditions for many of the indicator metrics, including total phosphorus, salinity, temperature, high-flow frequency, and metrics of habitat and biological assemblage quality. A final analysis exploring the spatial representation of each indicator network showed that some indicator monitoring networks did not cover certain settings, such as small watersheds. These results provided an initial assessment of stream health status and trends and will continue to be leveraged to describe conditions across the Chesapeake Bay watershed to help inform local and regional management decisions. These results also highlighted the need for improved coordination among monitoring organizations to support long-term multi-indicator monitoring and assessment.

Chesapeake Bay watershed↗

USGS2024

Declines in brook trout abundance linked to atmospheric warming in Maryland, USA

Salmonid fishes provide an important indicator of climate change given their reliance on cold water. We evaluated temporal changes in the density of stream-dwelling brook trout ( Salvelinus fontinalis ) from surveys conducted over a 36-year period (1988–2023) by the Maryland Department of Natural Resources in Eastern North America. Nonparametric trend analyses revealed decreasing densities of adult fish (age 1+) in 19 sites (27%) and increases in 5 sites (7%). In contrast, juvenile fish (age 0) densities decreased in 4 sites (6%) and increased in 10 sites (14%). Declining adult brook trout trends were related to atmospheric warming rates during the study period, and this relationship was stronger than the effects of land use change or non-native brown trout. In contrast, juvenile fish trends generally increased with elevation but were not related to air temperature trends or land use change. Our analysis reveals significant changes in several brook trout populations over recent decades and implicates warming atmospheric conditions in population declines. Our findings also suggest the importance of temperature for adult survival rather than recruitment limitation in brook trout population dynamics.

Maryland↗

USGS2024

Community for Data Integration 2020 project report

The U.S. Geological Survey Community for Data Integration annually funds small projects focusing on data integration for interdisciplinary research, innovative data management, and demonstration of new technologies. This report provides a summary of the 12 projects funded in fiscal year 2020, outlining their goals, activities, and accomplishments.

Open-File Report↗

USGS2024

Utility of an instantaneous salt dilution method for measuring streamflow in headwater streams

Streamflow records are biased toward large streams and rivers, yet small headwater streams are often the focus of ecological research in response to climate change. Conventional flow measurement instruments such as acoustic Doppler velocimeters (ADVs) do not perform well during low-flow conditions in small streams, truncating the development of rating curves during critical baseflow conditions dominated by groundwater inflow. We revisited an instantaneous solute tracer injection method as an alternative to ADVs based on paired measurements to compare their precision, efficiency, and feasibility within headwater streams across a range of flow conditions. We show that the precision of discharge measurements using salt dilution by slug injection and ADV methods were comparable overall, but salt dilution was more precise during the lowest flows and required less time to implement. Often, headwater streams were at or below the depth threshold where ADV measurements could even be attempted and transects were complicated by coarse bed material and cobbles. We discuss the methodological benefits and limitations of salt dilution by slug injection and conclude that the method could facilitate a proliferation of streamflow observation across headwater stream networks that are highly undersampled compared to larger streams.

Virginia↗

USGS2024

Connecting conservation practices to local stream health in the Chesapeake Bay watershed

The Chesapeake Bay Partnership is implementing conservation practices (CPs) throughout the Chesapeake Bay watershed to reduce nutrient and sediment delivery to the Bay. This study intends to provide an integrated and detailed understanding of how local streams respond to these CP-driven management efforts. Key issue: To what extent do CPs positively affect the health of local streams in the nontidal watershed (cobenefits)? Critical unknown: How do CPs change water quality and the stressors that affect stream aquatic life? Which CPs improve stream health more effectively? Critical knowledge to be delivered to stakeholders includes— the effects of CPs on local water-quality conditions, the degree to which these same CPs also provide local stream-ecosystem benefits, and a deeper understanding of local stream-ecosystems, including stressors and CPs, to guide the selection of management efforts that enhance both water quality and overall stream-ecosystem health.

Chesapeake Bay watershed↗

USGS2024

Effects of episodic stream dewatering on brook trout spatial population structure

Stream dewatering is expected to become more prevalent due to climate change, and we explored the potential consequences for brook trout ( Salvelinus fontinalis) within a temperate forest ecosystem in eastern North America. We estimated fish density within stream pools ( n = 386) from electrofishing surveys over 10 years (2012–2021) to compare a stream that exhibits episodic dewatering (Paine Run) against a stream of similar size that remains flow-connected (Staunton River) within Shenandoah National Park, Virginia (U.S.A.). Annual surveys encompassed fluvial distances ranging from 2.6 to 4.4 km in each stream. Mean annual fish density (fish/pool m 2 ) was not different between streams for juvenile or adult age classes, but spatial variation in density was greater in Paine Run for both age classes of fish. Paine Run also included a greater proportion of unoccupied pools than Staunton River and exhibited stronger spatial autocorrelation in fish density among nearby pools, suggesting dispersal limitation due to surface flow fragmentation. Fish density in pools increased during years with low summer precipitation, and this effect was observed in both streams but was stronger in Paine Run than Staunton River, further indicating the importance of fish movement into pools in response to low-flow thresholds. Our results indicate the importance of pools as ecological refuges during low-flow conditions and that episodic dewatering may affect extirpation risks for brook trout by sequestering more fish into fewer areas. Our findings also highlight the importance of hydrological variation within stream networks because downstream river gages could not predict the observed spatial heterogeneity in fish density or pool occupancy.

Freshwater Biology↗

USGS2024

Strong variation in Brook Trout trends across geology, elevation, and stream size in Shenandoah National Park

Objective Landscape context structures fish abundance and dynamics, and understanding trends in fish abundance across the landscape is often prerequisite for effective conservation. In this study, we evaluated the status and trends of Brook Trout Salvelinus fontinalis in Shenandoah National Park to understand how these are structured across bedrock geology, elevation, and stream size. Methods We used long-term monitoring data from 94 sites in Shenandoah National Park to evaluate trends in Brook Trout abundance over a 27-year period (1996–2022) and assess the importance of local environmental covariates using a hierarchical Bayesian N-mixture model based on depletion sampling. Focal covariates were chosen for their demonstrated importance in structuring fish populations in Shenandoah National Park and elsewhere. Bedrock geology controls sensitivity to acid deposition, watershed area is related to stream habitat features such as complexity and flow variability, and elevation creates gradients in temperature. Result Models revealed significant decreases in adult Brook Trout abundance over time (95% credible intervals < 0) for 31 of 94 sites (33%), and at least three sites exhibited apparent extirpations over the study period. Estimated Brook Trout abundance declined by 50% or more in approximately 70% of streams across the park over the study period. Sites with the warmest water temperatures exhibited the fastest declines in abundance. However, large watersheds on poorly buffered bedrock exhibited significant gains in abundance over time, suggesting some recovery from acid deposition due to improvements in air quality. Conclusion Our analysis revealed large and divergent changes in Brook Trout abundance over recent decades and suggests the importance of local water temperature and acid sensitivity as probable causal mechanisms. These results highlight the importance of considering local factors when evaluating long-term trends in stream fish populations. Results of this study can assist the development of targeted conservation actions within Shenandoah National Park and elsewhere.

Virginia↗

USGS2024

Taking heat (downstream): Simulating groundwater and thermal equilibrium controls on annual paired air–water temperature signal transport in headwater streams

Headwater stream temperature often exhibits spatial variation at the kilometer-scale, but the relative importance of the underlying hydrogeological processes and riverine perturbations remains poorly understood. In this study, we investigated the relative importance of groundwater (GW) and other processes on downstream annual stream temperature signal characteristics using deterministic heat budget model (HFLUX) scenarios within an idealized stream reach representative of mountainous forested conditions. We summarized annual stream thermal regimes from the relationship of paired sinusoidal air and water temperature signals (amplitude ratio, phase lag, and mean ratio). Results showed that downstream changes in annual temperature depended on the thermal gradient between water and the hypothetical equilibrium temperature (where all heat fluxes sum to zero). GW inflow, riparian shading, and the boundary input signal were the most significant factors affecting downstream annual water temperature signals, while flow volume and channel dimensions impacted how quickly annual temperature signals changed. Effects of GW were dominated by advective rather than conductive heat exchange processes, but conduction played a larger role when GW input was more spatially diffuse. Our results indicated several mechanisms by which local processes may affect stream thermal resilience to disturbances and can help guide management of wildfire and climate change.

Journal of Hydrology↗

USGS2023

Aging contrast: A contrastive learning framework for fish re-identification across seasons and years.

The fields of biology, ecology, and fisheries management are witnessing a growing demand for distinguishing individual fish. In recent years, deep learning methods have emerged as a promising tool for image-based fish recognition. Our study is focused on the re-identification of masu salmon from Japan, wherein fish were individually marked and photographed to evaluate discriminative body characteristics. Unlike previous studies where fish were sampled during the same time period, we evaluated individual re-identification across seasons and years to address challenges due to aging, seasonal variation, and other factors. In this paper, we propose a new contrastive learning framework called Ag ing Co ntrast (AgCo) and evaluate its performance on the masu salmon dataset. Our analysis indicates that, unlike large changes in body size over time, the pattern of parr marks on the lateral line of the fish body remains relatively stable, despite some change in coloration across seasons. AgCo accounts for such seasonally-invariant features and performs re-identification based on the cosine similarity of these features. Extensive experiments show that our AgCo method outperforms other state-of-the-art methods.

Conference Paper↗

USGS2023

Spatial asynchrony and cross-scale climate interactions in populations of a coldwater stream fish

Climate change affects populations over broad geographic ranges due to spatially autocorrelated abiotic conditions known as the Moran effect. However, populations do not always respond to broad-scale environmental changes synchronously across a landscape. We combined multiple datasets for a retrospective analysis of time-series count data (5–28 annual samples per segment) at 144 stream segments dispersed over nearly 1,000 linear kilometers of range to characterize the population structure and scale of spatial synchrony across the southern native range of a coldwater stream fish (brook trout, Salvelinus fontinalis ), which is sensitive to stream temperature and flow variations. Spatial synchrony differed by life stage and geographic region: it was stronger in the juvenile life stage than in the adult life stage and in the northern sub-region than in the southern sub-region. Spatial synchrony of trout populations extended to 100–200 km but was much weaker than that of climate variables such as temperature, precipitation, and stream flow. Early life stage abundance changed over time due to annual variation in summer temperature and winter and spring stream flow conditions. Climate effects on abundance differed between sub-regions and among local populations within sub-regions, indicating multiple cross-scale interactions where climate interacted with local habitat to generate only a modest pattern of population synchrony over space. Overall, our analysis showed higher degrees of response heterogeneity of local populations to climate variation and consequently population asynchrony than previously shown based on analysis of individual, geographically restricted datasets. This response heterogeneity indicates that certain local segments characterized by population asynchrony and resistance to climate variation could represent unique populations of this iconic native coldwater fish that warrant targeted conservation. Advancing the conservation of this species can include actions that identify such priority populations and incorporate them into landscape-level conservation planning. Our approach is applicable to other widespread aquatic species sensitive to climate change.

Global Change Biology↗

USGS2023

Stabilising effects of karstic groundwater on stream fish communities

Although groundwater exchange processes are known to modulate atmospheric influences on stream temperature and flow, the implications for ecological stability are poorly understood. Here, we evaluated temporal change in stream fish communities across a gradient of groundwater influence defined by karst terrain (carbonate parent materials) within the Potomac River basin of eastern North America. We surveyed 12 sites in 2022 that had been sampled 29–30 years previously with similar methods. We also collected stream temperature data from each site and used the regression slope of the air-water temperature relationship to index stream thermal sensitivity and groundwater exchange processes. Sites in karst terrain exhibited strong groundwater controls on stream temperature, and fish communities were more stable over time in these locations than elsewhere. However, stream thermal sensitivity was a stronger predictor of species persistence than the spatial distribution of karst terrain in contributing areas, highlighting the ecological importance of local variation in groundwater discharge processes. The presence of calcium precipitates (marl) in stream substrates was associated with low thermal sensitivity and ecological stability over time, and we suggest such visible features may be a useful indicator of climate change refugia in stream ecosystems.

Ecology of Freshwater Fish↗

USGS2023

Appendix D: Synthesis element 1 (revised): Water temperature effects on fisheries and stream health in nontidal waters

A limited review of relevant scientific literature related to temperature sensitivities of fish species, stream health indicators, and any related geospatial information was conducted. Based on this review, we provide a syntheses of information related to nontidal waters in the Chesapeake Bay Rising stream temperatures will have a range of impacts on nontidal aquatic ecosystems. Cold headwaters and associated species like brook trout and sculpin are especially vulnerable to higher stream temperatures. Efforts could be taken to identify and protect high quality resilient cold headwater brook trout (Salvelinus fontinalis) habitat. More information on groundwater impacts on stream temperatures and ecologically relevant temperature thresholds for species of concern could help resource managers identify temperature resilient habitats and populations. A vulnerability assessment could be valuable to better understand the drivers and stressors of rising stream temperatures, their effects on aquatic resources, and the risk to fish and other aquatic species. Further research could help in developing and fully vetting a complete list of cold/cool water benthic macroinvertebrate taxa and freshwater mussel taxa that are vulnerable to temperature change in the Chesapeake watershed.

Report↗

USGS2023

Karst terrain promotes thermal resiliency in headwater streams

The response of stream ecosystems to climate change will depend in part on groundwater processes that reduce the sensitivity of streams to atmospheric conditions. We investigated the thermal sensitivity of streams across a gradient of groundwater inputs defined by karst terrain (carbonate parent materials) in the headwaters of the Potomac River basin in eastern North America. We collected stream temperature data and quantified thermal sensitivity for 30 sites from the relationship between daily mean water and air temperatures. Our analysis demonstrates that thermal sensitivity is lower for streams in karst terrain than elsewhere, and that the effect of karst terrain is more important than effects of elevation or basin size in this regard. Our study indicates the importance of karstic groundwater for stream thermal resiliency and suggests the importance of riparian vegetation for maintaining stream temperatures elsewhere. Our study also provides a simple and rapid method for climate change research that can be implemented in conjunction with watershed organizations and citizen science networks.

West Virginia↗

USGS2022

Bedrock depth influences spatial patterns of summer baseflow, temperature and flow disconnection for mountainous headwater streams

In mountain headwater streams, the quality and resilience of summer cold-water habitat is generally regulated by stream discharge, longitudinal stream channel connectivity and groundwater exchange. These critical hydrologic processes are thought to be influenced by the stream corridor bedrock contact depth (sediment thickness), a parameter often inferred from sparse hillslope borehole information, piezometer refusal and remotely sensed data. To investigate how local bedrock depth might control summer stream temperature and channel disconnection (dewatering) patterns, we measured stream corridor bedrock depth by collecting and interpreting 191 passive seismic datasets along eight headwater streams in Shenandoah National Park (Virginia, USA). In addition, we used multi-year stream temperature and streamflow records to calculate several baseflow-related metrics along and among the study streams. Finally, comprehensive visual surveys of stream channel dewatering were conducted in 2016, 2019 and 2021 during summer low flow conditions (124 total km of stream length). We found that measured bedrock depths along the study streams were not well-characterized by soils maps or an existing global-scale geologic dataset where the latter overpredicted measured depths by 12.2 m (mean) or approximately four times the average bedrock depth of 2.9 m. Half of the eight study stream corridors had an average bedrock depth of less than 2 m. Of the eight study streams, Staunton River had the deepest average bedrock depth (3.4 m), the coldest summer temperature profiles and substantially higher summer baseflow indices compared to the other study steams. Staunton River also exhibited paired air and water annual temperature signals suggesting deeper groundwater influence, and the stream channel did not dewater in lower sections during any baseflow survey. In contrast, Paine Run and Piney River did show pronounced, patchy channel dewatering, with Paine Run having dozens of discrete dry channel sections ranging from 1 to greater than 300 m in length. Stream dewatering patterns were apparently influenced by a combination of discrete deep bedrock (20+ m) features and more subtle sediment thickness variation (1–4 m) depending on local stream valley hydrogeology. In combination, these unique datasets show the first large-scale empirical support for existing conceptual models of headwater stream disconnection based on spatially variable underflow capacity and shallow groundwater supply.

Virginia↗

USGS2022

Life history strategies of stream fishes linked to predictors of hydrologic stability

Life history theory provides a framework to understand environmental change based on species strategies for survival and reproduction under stable, cyclical, or stochastic environmental conditions. We evaluated environmental predictors of fish life history strategies in 20 streams intersecting a national park within the Potomac River basin in eastern North America. We sampled stream sites during 2018–2019 and collected 3801 individuals representing 51 species within 10 taxonomic families. We quantified life history strategies for species from their coordinates in an ordination space defined by trade-offs in spawning season duration, fecundity, and parental care characteristic of opportunistic, periodic, and equilibrium strategies. Our analysis revealed important environmental predictors: Abundance of opportunistic strategists increased with low-permeability soils that produce flashy runoff dynamics and decreased with karst terrain (carbonate bedrock) where groundwater inputs stabilize stream flow and temperature. Conversely, abundance of equilibrium strategists increased in karst terrain indicating a response to more stable environmental conditions. Our study indicated that fish community responses to groundwater and runoff processes may be explained by species traits for survival and reproduction. Our findings also suggest the utility of life history theory for understanding ecological responses to destabilized environmental conditions under global climate change.

Maryland, Virginia, West Virginia↗

USGS2022

Stream size, temperature, and density explain body sizes of freshwater salmonids across a range of climate conditions

Climate change and anthropogenic activities are altering the body sizes of fishes, yet our understanding of factors influencing body size for many taxa remains incomplete. We evaluated the relationships between climate, environmental, and landscape attributes and the body size of different taxa of freshwater trout (Salmonidae) in the USA. Hierarchical spatial modeling across a gradient of habitats (5221 sites) illustrated the importance of watershed effects, which explained 17%–45% of the of the variation in body size across taxa. Stream size had a strong, positive relationship with body size, yet there was approximately tenfold difference in the strength of the relationship across taxa. Trout body size consistently declined with increasing density across taxa. Despite reliance on cold water, we found positive relationships between summer stream temperature and trout body size across most taxa. Our results highlight how providing trout access to larger, productive rivers for the expression of growth and life-history variation would promote body size diversity within and across populations.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2022

Spout Run temperature study revisited- Part II: New insights for trout habitat from TU & USGS collaboration 2022

The Winchester TU Chapter partnered with US Geological Survey scientists to forecast habitat conditions for brook trout in Virginia. The results can be viewed here: https://chesapeake.usgs.gov/fishforecast/ TU members deployed stream temperature gages within several streams across the region: Dry River, Passage Creek, Spout Run, Beaver Creek, Mossy Creek. The USGS then used the temperature data to evaluate current and future conditions for brook trout.

Virginia↗

USGS2021

Comparative morphology of freshwater sculpin inhabiting different environmental conditions in the Chesapeake Bay headwaters

We compared body morphology of two freshwater sculpin taxa that inhabit distinct environmental conditions in the Chesapeake Bay watershed of eastern North America: Potomac sculpin ( C. girardi , Robins; PS) and checkered sculpin ( C. sp. cf. girardi ; CS). Both taxa are endemic to the study area, but PS are more broadly distributed than CS which are limited to karst groundwater-dominated streams in the central Potomac River basin. We examined preserved specimens from sites encompassing their geographic range (six sites per taxon) to evaluate taxonomic differences and environmental effects. Pelvic fin ray counts and body shape distinguished the study taxa. Morphological variation exhibited stronger relationships to environmental covariates (site elevation and basin size) in PS than CS as expected. In addition, the frequency of specimens with a united median chin pore increased with site elevation in PS (but not CS), suggesting thermal effects on preoperculomanibular canal development. However, contrary to expectation, PS did not exhibit greater among-population variation in body shape than CS, and this indicates the potential importance of unmeasured environmental differences among karst groundwater-dominated streams in the study area. Our study also indicated the utility of stream-level management units for CS, an undescribed species recognized as “critically imperiled” by state agencies.

Chesapeake Bay↗