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Nathan J. Kleist

Publications and source records attributed to Nathan J. Kleist.

11 recordsLinked to original sources

Modeling chronic wasting disease transmission risk in mule deer related to habitat characteristics

Chronic wasting disease (CWD) is a prion disease of cervids that spreads to uninfected individuals through direct transmission (contact with infected individuals), vertical transmission (from mother to offspring), or indirect transmission (exposure to contaminated environments). The risk of indirect transmission is unevenly distributed on the landscape, and risk levels are expected to be controlled by patterns of habitat use by infected and uninfected individuals as well as environmental properties that alter the length of time prions remain infectious and available for uptake. Despite evidence from controlled or laboratory studies identifying environmental properties likely to affect patterns of CWD prion locations on the landscape, it remains difficult to connect mechanisms to realized increased or decreased risk of disease transmission, and few studies have attempted to detect patterns of different CWD risk in different environments. Using data from GPS-collared mule deer in Wyoming that were CWD-tested annually, we constructed models predicting annual probability of disease transmission contingent on environmental properties extracted from GPS use points. We compared models that emphasized different pathways of disease transmission by including or excluding sets of covariates that described deer density, habitat selection, and covariates expected to affect prion persistence in the environment. Results indicated that key habitat characteristics often selected by mule deer, such as proximity to secondary roads, were also associated with higher risk of testing positive for CWD, which supports the hypothesis that disease risk was correlated to patterns of habitat use by deer. We also found increased risk associated with spatial properties that were not selected-for by deer, such as areas where topography collects moisture, suggesting that prion retention mechanisms also play a role in risk. Incorporating these spatially-varying risk factors into our understanding of CWD transmission and outbreak progression can support managers in designing data collection and disease management strategies.

Wyoming

Mapping predicted ecological states at landscape scales using remote sensing data and machine learning

Dryland ecosystems, covering 45% of the Earth's land and supporting over one-third of the global population, face significant threats from land degradation and ecological state change. Managing these ecosystems is complex, and science-based frameworks like Ecological Site Descriptions and state-and-transition models are essential tools for guiding decisions to support ecological health while maintaining stakeholder values such as grazing, wildlife, and recreation. However, alignment of these frameworks with smaller scale soil survey maps limits their applicability to broader ecological processes. Here, we extend these frameworks to larger landscapes with a machine learning approach that integrates large-scale, high-resolution vegetation data with identified ecological states from a data-driven state-and-transition model developed for a landscape-scale Ecological Site Group. A “global” model, which used combined inputs from multiple remotely sensed datasets, outperformed individual dataset models based on evaluation with independent data. Ecological state maps generated through this approach broaden the utility of state-and-transition models across Ecological Site Groups, providing a more spatially robust tool for land management at watershed and larger landscape scales. These methods, and the associated ecological state maps, can help meet critical needs for improved land condition assessments that support development of resource management plans and help identify priority areas for restoration and conservation.

Arizona, Colorado, New Mexico, Utah, Wyoming

Effects of noise from oil and gas development on raptors and songbirds—A science synthesis to inform National Environmental Policy Act analyses

The U.S. Geological Survey is working with Federal land management agencies to develop a series of science syntheses to support environmental effects analyses that agencies conduct to comply with the National Environmental Policy Act (NEPA). This report synthesizes science information about the potential effects of noise from oil and gas development on North American raptors, songbirds, and other small avian species. We conducted a structured search of published scientific literature to find information about noise levels produced during oil and gas development, methods for analyzing sound propagation, the effects of noise on avian species, and measures to reduce noise emissions. We follow the organization first established in U.S. Geological Survey Scientific Investigations Report 2023-5114, in which the report sections align with standard elements of NEPA analyses. We found that oil and gas development is a common source of human-caused noise on public lands and includes noise sources such as heavy construction and drilling machinery, long-term production machinery, truck traffic, and aircraft. Common techniques for predicting potential noise include field data collection using a sound level meter, inference from previously published data, and sound propagation modeling. The effects of human-caused noise on songbirds are well researched, whereas, among raptors, only owl species have been well-studied in relation to noise. Several studies have established that noise can reduce owl hunting success because many owl species are heavily reliant on hearing prey when hunting. The effects of noise on songbirds depend on several factors. Typically, birds that rely on vocal communication for mating, predator detection, and spatial orientation, and that are less able to adjust the frequencies of their vocalizations, are more vulnerable to behavioral changes and decreased fitness in noisy areas. Techniques suggested in the literature for reducing noise emissions include artificial sound barriers, seasonal and daily timing restrictions, traffic control measures, and siting infrastructure to take advantage of natural sound barriers. Public land managers can use this report by incorporating it by reference in NEPA documentation, as supplemental information, or as a general reference to find literature or identify gaps in the literature about the effects of noise from oil and gas development on raptors and songbirds.

Scientific Investigations Report

Structured science syntheses to inform decision making on Federal public lands

The U.S. Geological Survey, Bureau of Land Management, and U.S. Fish and Wildlife Service partnered to develop a new type of science product: the structured science synthesis. Structured science syntheses are peer-reviewed reports that synthesize science information about a priority resource management issue on public lands. Structured science syntheses are developed explicitly to facilitate the application of science to decision making. Key characteristics of structured science syntheses include that they are coproduced with resource managers, developed using clear, repeatable methods and designed for ease of use. The syntheses include different types of science information needed for analyses completed under the National Environmental Policy Act.

Fact Sheet

Annotated bibliography of scientific research on Taeniatherum caput-medusae published from January 2010 to January 2022

Integrating recent scientific knowledge into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing scientific knowledge can be time consuming and costly. To assist in this process, the U.S. Geological Survey is creating a series of annotated bibliographies on topics of management concern for western lands. Previously published reports introduced a methodology for preparing annotated bibliographies to facilitate the integration of recent, peer-reviewed science into resource management decisions. Therefore, relevant text from those efforts is reproduced here to frame the presentation. Invasive annual grasses are widely distributed throughout the western United States and threaten native ecosystems by altering fire regimes, replacing native plants, and altering grazing patterns, often with tremendous associated costs. One invasive annual grass, Taeniatherum caput-medusae (hereafter, medusahead), was first documented in the United States in 1887 and has been identified as a species of management concern. Medusahead’s life history traits allow it to quickly and effectively dominate native plant communities, and it has already taken over millions of acres in western North America. Although medusahead can spread widely and disrupt ecosystem function, it has been studied less than other western invasive grass species. We compiled and summarized peer-reviewed journal articles, data products, and formal technical reports (such as U.S. Department of Agriculture Forest Service General Technical Reports and U.S. Geological Survey Open-File Reports) on medusahead, published between January 2010 and January 2022. We first performed a systematic search of three reference databases and three government databases using the search phrase “medusahead” OR “medusa head” OR “ Taeniatherum caput-medusae ” OR “ Taeniatherum caputmedusae ” OR “ Taeniatherum asperum .” We refined the initial list of products by removing (1) duplicates, (2) products not written in English, (3) publications that were not focused on North America, (4) publications that were not published as research, data products, or scientific review articles in peer-reviewed journals or as formal technical reports, and (5) products for which medusahead was not a research focus, or the study did not present new data or findings about medusahead. We summarized each product using a consistent structure (background, objectives, methods, location, findings, and implications) and identified the management topics (for example, species and population characteristics; habitat; and control and management efforts) addressed by each product. We also noted which publications included new geospatial data. The review process for this annotated bibliography included an initial internal colleague review of each summary, requesting input on each summary from an author of the original publication, and a formal peer review. Our initial searches resulted in 4,245 total products, of which 211 met our criteria for inclusion. The most commonly addressed management topics addressed in products summarized in the annotated bibliography were as follows: nonnative invasive plants, weed management, site-scale habitat characteristics, habitat restoration or reclamation, and cultural management of weeds. All published bibliographies, including the online version of this bibliography, are available at the Science for Resource Managers ( https://apps.usgs.gov/science-for-resource-managers ). This database is searchable by topic, location, and year and includes links to each original publication. The studies compiled and summarized here may inform planning and management actions that seek to maintain and restore sagebrush landscapes and associated native species across the western United States.

Open-File Report

Annotated bibliography of scientific research on greater sage-grouse published from October 2019 to July 2022

Integrating recent scientific knowledge into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing scientific knowledge can be time consuming and costly. To assist in this process, the U.S. Geological Survey (USGS) created a series of annotated bibliographies on topics of management concern for western lands. Previously published reports introduced a methodology for preparing annotated bibliographies to facilitate integration of recent, peer-reviewed science into resource management decisions. Therefore, relevant text from those efforts is reproduced here and built on to incorporate new information. The greater sage-grouse (Centrocercus urophasianus; hereafter “GRSG”) has been a focus of scientific investigation and management action for the past two decades. The 2015 U.S. Fish and Wildlife Service listing determination of “not warranted” under the Endangered Species Act was in part a result of a large-scale collaborative effort to develop strategies to conserve GRSG populations and their habitat and to reduce threats to both. New scientific information augments existing knowledge and can help inform updates or modifications to existing plans for managing GRSG and sagebrush ecosystems. However, the sheer number of scientific publications can be a challenge for managers tasked with evaluating and determining the need for potential updates to existing planning documents. To assist in this process, the USGS has reviewed and summarized the scientific literature published since January 1, 2015. Our most recent GRSG literature summary was published in 2020 (Carter and others, 2020) and included products published through October 2, 2019. Here, we consider products published between October 2, 2019, and July 21, 2022. We compiled and summarized peer-reviewed journal articles, data products, and formal technical reports (such as U.S. Department of Agriculture Forest Service General Technical Reports and USGS Open-File Reports) on greater sage-grouse. We first systematically searched three reference databases and three government databases using the search phrase “greater sage-grouse.” We refined the initial list of products by removing (1) duplicates, (2) publications not published as research, data products, or scientific review articles in peer-reviewed journals or as formal technical reports, and (3) products for which greater sage-grouse was not a research focus or the study did not present new data or findings about greater sage-grouse. We summarized each product using a consistent structure (background, objectives, methods, location, findings, and implications) and identified management topics addressed by each product; for example, species and population characteristics. We also identified projects that provided new geospatial data. The review process for this annotated bibliography included two initial internal colleague reviews of each summary, requesting input on each summary from an author of the original publication, and formal peer review. Our initial searches resulted in 221 total products, of which 147 met our criteria for inclusion. Across products summarized in the annotated bibliography, broad-scale habitat characteristics, behavior or demographics, site-scale habitat characteristics, habitat selection, and population estimates or targets were the most commonly addressed management topics. The online version of this bibliography, which will be available on the Science for Resource Managers tool ( https://apps.usgs.gov/science-for-resource-managers ), will be searchable by topic, location, and year, and will include links to each original publication. The studies compiled and summarized here may inform planning and management actions that seek to maintain and restore sagebrush landscapes and GRSG populations across the GRSG range.

Open-File Report

Effects of noise from oil and gas development on ungulates and small mammals—A science synthesis to inform National Environmental Policy Act analyses

The U.S. Geological Survey is working with Federal land management agencies to develop a series of science syntheses to support environmental effects analyses that agencies conduct to comply with the National Environmental Policy Act (NEPA). This report synthesizes science information about the potential effects of noise from oil and gas development on North American ungulates and small mammals, including rodents and leporids. We conducted a structured search of published scientific literature to find information about noise levels produced during oil and gas development, methods for analyzing sound propagation, the effects of noise on ungulates and small mammals, and measures to reduce noise emissions. We organized the sections of this synthesis to align with standard elements of NEPA analyses. We found that oil and gas development is a common source of human-caused noise on public lands and includes noise sources such as heavy construction and drilling machinery, long-term production machinery, truck traffic, and aircraft. Common techniques for predicting potential noise include field data collection using a sound level meter, inference from previously published data, and sound propagation modeling. A substantial body of research shows that human-caused noise can affect wildlife health and behavior, with variation in sensitivity to noise among species. Studies have shown consistent, detectable effects of noise on ungulates, but the amount of literature on ungulates is very small, and additional research could improve our understanding of differences in effects among species, seasons, and individual indicators of fitness. Several species of small mammals are dependent on audible signals for predator detection and communication, and noise has been shown to affect their vigilance and foraging behavior. However, other studies have documented no effects to rodents in noisy areas, and the effects of noise on small mammals may differ by species and study system. Techniques suggested in the literature for reducing noise emissions include sound barriers, seasonal and daily timing restrictions, traffic control measures, and siting infrastructure to take advantage of natural sound barriers. Public land managers can use this report by incorporating it by reference in NEPA documentation, as supplemental information, or as a general reference for literature about the effects of noise from oil and gas development on ungulates and small mammals.

Scientific Investigations Report

Annotated bibliography of scientific research on Gunnison sage-grouse published from January 2005 to September 2022

Integrating recent scientific knowledge into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing scientific knowledge can be time consuming and costly. To assist in this process, the U.S. Geological Survey is creating a series of annotated bibliographies on topics of management concern for western lands. Previously published reports introduced a methodology for preparing annotated bibliographies to facilitate the integration of recent, peer-reviewed science into resource management decisions. Therefore, relevant text from those efforts is reproduced here to frame the presentation. Centrocercus minimus (Gunnison sage-grouse; hereafter GUSG) has been a focus of scientific investigation since the early 2000s. The U.S. Fish and Wildlife Service listed GUSG as threatened under the Endangered Species Act in 2014 because of declining populations and increasing habitat loss. The U.S. Fish and Wildlife Service, Bureau of Land Management, and Colorado Parks and Wildlife have sought to increase the conservation of this species by adapting management and recovery plans to reduce threats and increase population resiliency. GUSG are studied less than the closely related Centrocercus urophasianus (greater sage-grouse); however, research efforts have recently increased to understand the life history, genetics, and habitat suitability of this sagebrush-obligate species. We compiled and summarized peer-reviewed journal articles, data products, and formal technical reports (such as U.S. Department of Agriculture Forest Service General Technical Reports and U.S. Geological Survey Open-File Reports) on GUSG, published between January 2005 and September 2022. We first systematically searched three reference databases and three government databases using the following search phrases: “Gunnison sage-grouse” or “lesser sage-grouse” or “Gunnison grouse” or “Gunnison sage grouse” or “lesser sage grouse” or “ Centrocercus minimus .” We refined the initial list of products by removing (1) duplicates, (2) publications that were not published as research, data products, or scientific review articles in peer-reviewed journals or as formal technical reports, and (3) products that did not have GUSG as a research focus or products that did not present new data or findings about GUSG. We summarized each product using a consistent structure (background, objectives, methods, location, findings, and implications) and identified the management topics (for example, population estimates or targets, habitat, and management efforts) addressed by each product. We also noted which publications included new geospatial data. The review process for this annotated bibliography included two initial internal colleague reviews of each summary, requesting input on each summary from an author of the original publication, and a formal peer review. Our initial searches resulted in 80 total products, of which 63 met our criteria for inclusion of which 53 were products that had not been summarized before. Across products summarized in the annotated bibliography, broad-scale habitat characteristics; population estimates or targets; behavior or demographics; and genetics were the most commonly addressed management topics. The bibliographies are available on the Science for Resource Managers tool ( https://apps.usgs.gov/science-for-resource-managers ) and are searchable by topic, location, and year, and the search tool includes links to each original publication. The studies compiled and summarized in this annotated bibliography may inform planning and management actions that seek to maintain and restore sagebrush landscapes and GUSG populations across the GUSG range.

Colorado

Annotated bibliography of scientific research on pygmy rabbits published from 1990 to 2020

Integrating recent scientific knowledge into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing scientific knowledge can be time consuming and costly. To assist in this process, the U.S. Geological Survey (USGS) is creating a series of annotated bibliographies on topics of management concern for western lands. Previously published reports introduced a methodology for preparing annotated bibliographies to facilitate the integration of recent, peer-reviewed science into resource management decisions. Therefore, relevant text from those efforts is reproduced here to frame the presentation. Sagebrush ecosystems throughout North America face management challenges including habitat loss and fragmentation. Brachylagus idahoensis (pygmy rabbits) are a sagebrush-obligate species that has experienced population declines and range contraction in recent decades. A disjunct population of pygmy rabbits in the Columbia Basin in Washington was listed as federally endangered in 2003. Due to their specialized habitat requirements and low dispersal ability, pygmy rabbits are a high priority for managers throughout their range. We compiled and summarized peer-reviewed journal articles, data products, and formal technical reports (such as U.S. Forest Service General Technical Reports and U.S. Geological Survey Open-File Reports) on pygmy rabbits published between January 1, 1990 and December 31, 2020. We first conducted a structured search of three reference databases and three government databases using the phrase “pygmy rabbit” or “ Brachylagus idahoensis .” We refined the initial list of products by removing (1) duplicates, (2) products not written in English, (3) publications that were not focused on North America, (4) publications that were not published as research, data products, or scientific review articles in peer-reviewed journals or as formal technical reports, and (5) products for which pygmy rabbits were not a research focus or for which the study did not present new data or findings about pygmy rabbits. We summarized each product using a consistent structure (background, objectives, methods, location, findings, and implications) and identified the management topics (for example, captive breeding, habitat characteristics, and population estimates) addressed by each product. We also noted which publications included new publicly available geospatial data. The review process for this annotated bibliography included an initial internal colleague review of each summary, requesting input on each summary from an author of the original publication, and a formal peer review. Our initial searches resulted in 2,285 total products, of which 105 met our criteria for inclusion. Sensitive/rare wildlife, behavior or demographics, site-scale habitat characteristics, habitat selection, and effects distances or spatial scale were the management topics most commonly addressed. The online version of this bibliography, Science for Resource Managers, will be searchable by topic, location, and year; it will include links to each original publication, where available. The studies compiled and summarized here may inform planning and management actions that seek to maintain and restore sagebrush landscapes and associated native species across the western United States.

Open-File Report

Quantifying aspects of rangeland health at watershed scales in Colorado using remotely sensed data products

During grazing permit renewals, the Bureau of Land Management assesses land health using indicators typically measured using field-based data collected from individual sites within grazing allotments. However, agency guidance suggests assessments be completed at larger spatial scales. We explored how the current generation of remotely sensed data products could be used to quantify aspects of land health at watershed scales in Colorado to provide broad spatial and temporal context for the land health assessment process. We found multiple indicators could be quantified using these data products and were relevant to land health standards. Within focal watersheds, bare ground cover decreased over the past 30 years, while annual herbaceous cover has increased over the last 10 years. Vegetation productivity was variable over time, but interannual fluctuations were consistent across watersheds. Remotely sensed data products can help resource managers understand how current conditions relate to broad spatial and temporal trends in the region and could provide another line of evidence for the land health assessment process. They may also identify target areas where management strategies, such as eradication of invasive annual grasses, should be focused, and could help resource managers communicate complex issues to the public.

Colorado

Annotated bibliography of scientific research on Ventenata dubia published from 2010 to 2020

Integrating recent science into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing science information can be time consuming and costly. To assist in this process, the U.S. Geological Survey (USGS) is creating a series of annotated bibliographies on topics of management concern for western lands. Previously published reports introduced a methodology for preparing annotated bibliographies to facilitate the integration of recent, peer-reviewed science into resource management decisions. Therefore, relevant text from those efforts is reproduced here to frame the presentation. Invasive annual grasses are widely distributed throughout the western United States and threaten native ecosystems by altering fire regimes, replacing native plants, and altering grazing patterns, often with tremendous associated costs. One invasive annual grass, Ventenata dubia (hereafter, ventenata), was first introduced to the United States in the 1950s and has recently been identified as a management concern. Ventenata has a wide native geographic range, from Africa to northern Europe, and could thus potentially spread widely in the United States if left unmanaged. We compiled and summarized peer-reviewed journal articles, government reports, and data products on ventenata published between January 1, 2010, and August 27, 2020. We first conducted a systematic search of three reference databases and three government databases using the search phrase: “ventenata” OR “Ventenata dubia.” We refined the initial list of products by removing (1) duplicates, (2) products not written in English, (3) publications that were not focused in North America, (4) publications that were not published as research, data products, or scientific review articles in peer-reviewed journals or as formal technical reports, and (5) products for which ventenata was not a research focus or for which the study did not present new data or findings about ventenata. We summarized each product using a consistent structure (background, objectives, methods, location, findings, and implications) and identified the management topics (for example, species and population characteristics, habitat, control and management efforts) addressed by each product. We also noted which publications included new geospatial data. The review process for this annotated bibliography included an initial internal colleague review of each summary, requesting input on each summary from an author of the original publication, and a formal peer review. Our initial searches resulted in 505 total products, of which 29 met our criteria for inclusion. Nonnative invasive plants; weed management; behavior or demographics; dispersal, spread, vectors and pathways; site-scale habitat characteristics; survival; and weed management subtopic: herbicides were the management topics most commonly addressed. The online version of this annotated bibliography will be searchable by topic, location, and year; it will also include links to each original publication, where available. The studies compiled and summarized here may inform planning and management actions that seek to maintain and restore landscapes and control nonnative invasive species across the western United States.

Open-File Report