Search USGSSearch

Geology topics

Michael D. Porter

Publications and source records attributed to Michael D. Porter.

4 recordsLinked to original sources

Estimating predation of adult sockeye salmon by American white pelicans in the Columbia River using a state-space Bayesian approach

Adult sockeye salmon ( Oncorhynchus nerka ) migrate past the largest breeding colony of American white pelicans ( Pelecanus erythrorhynchos) in the Columbia River, USA. To investigate the magnitude of pelican predation on sockeye salmon, a state-space Bayesian model was used to estimate spatially and temporally explicit predation and survival probabilities, and to estimate the total number of salmon consumed by pelicans each year. Results show that pelican predation was a substantial source of salmon mortality in some years, with median predation probabilities ranging annually from 0.015 to 0.084, resulting in an estimate of 1328 to 47 265 fish consumed annually from 2014 to 2023. While there was evidence that predation probabilities were associated with the number of sockeye salmon returning to the Columbia River annually, there was no evidence that fish length was associated with susceptibility to predation. Additional research aimed at investigating how other biotic and abiotic factors influence sockeye salmon susceptibility to pelican predation are needed to broaden our understanding of predator–prey interactions and to determine to what degree predation limits sockeye salmon survival prior to spawning.

Washington

Quantifying flow and nonflow management impacts on an endangered fish by integrating data, research, and expert opinion

Managers charged with recovering endangered species in regulated river segments often have limited flexibility to alter flow regimes and want estimates of the expected population benefits associated with both flow and nonflow management actions. Disentangling impacts on different life stages from concurrently applied actions is essential for determining the effectiveness of each action, but difficult without models that integrate multiple information sources. Here, we develop and fit an integrated population model for endangered Rio Grande Silvery Minnow ( Hybognathus amarus ) in the Middle Rio Grande, New Mexico. We integrate catch per unit effort monitoring data collected during 2002–2018 with population estimates, data collected during rescue of minnow from drying pools, habitat availability estimates, laboratory results, releases of hatchery reared minnow, and expert opinion. We use expert elicitation to develop a larval carrying capacity index as an informed proxy for the complex interactions among flow, habitat, and life history in this species. We evaluate the model using out-of-sample forecasts of 2019 and 2020, develop an algorithm to identify supplemental water releases that maximize benefits to the minnow, and quantify the effectiveness of various actions. Experts generally agreed on the duration and timing of flow requirements and disagreed regarding the importance of different magnitudes. The integrated model with the larval carrying capacity index outperformed two alternative models in forecasting catch in 2019 and 2020. The model estimates that minnow abundance varied by more than three orders of magnitude between 2002 and 2018 and that in a few years recruitment was limited by spawner abundance. Evaluation of the expected benefits of flow and nonflow management actions to fall population abundance across different years suggests that efficient addition of water to the base hydrograph is the most effective action in most, but not all years. Many actions are effective only under certain hydrologic and population conditions and the effectiveness of different actions varies in different sections of the study area. Widespread water extraction and river regulation combined with periodic drought and ongoing climate change may necessitate creative management of federally listed fish species in arid systems informed by thorough analyses of management effectiveness.

Ecosphere

The North American Freshwater Migratory Fish Database (NAFMFD): Characterizing the migratory life histories of freshwater fishes of Canada, the United States and Mexico

Aim Migratory freshwater fishes are those that must access discrete habitats to complete their life cycles. Freshwater fish migrations occur around the world and provide numerous ecosystem services for humans and natural systems; however, many migratory species are in decline globally. A limiting factor to successfully conserve freshwater migratory fishes is that the migratory life histories of many species are unknown or only partially described. To provide researchers with critical and comprehensive information to conserve migratory fishes, we developed the North American Freshwater Migratory Fish Database (NAFMFD). Location Canada, Mexico and the United States. Taxon Freshwater fish. Methods To develop this database, we assigned migratory status, pattern and behaviour to a comprehensive list of freshwater fish species found throughout North America. We assembled the database which included assignments (i.e. migratory status, pattern and behaviour) as well as the sources used to make the assignments. Researchers and managers from across North America reviewed the database for completeness and accuracy on the migratory life histories of fishes. Results The database synthesizes current knowledge of migratory status, pattern and behaviour of native and non-native freshwater fishes throughout North America, including 1250 species representing 79 families and 325 genera. Results showcase the diversity of migratory life histories of freshwater fishes on the continent, including that at least 25% of North American freshwater fishes are migratory, 23% are non-migratory and 44% have undetermined migratory status. Main conclusions NAFMFD improves the quality of migratory data accessible to researchers, which supports a more holistic understanding of the threats encountered by migratory fishes, including habitat fragmentation. The approach we used in developing NAFMFD can provide guidance for developing similar databases in other regions. Collectively, our work offers new insights into the range of freshwater fish migratory life histories, stimulating a need to better understand this diversity globally.

Journal of Biogeography

Physical characteristics and fish assemblage composition at site and mesohabitat scales over a range of streamflows in the Middle Rio Grande, New Mexico, winter 2011-12, summer 2012

In winter 2011&ndash;12 and summer 2012, the U.S. Geological Survey (USGS), in cooperation with the U.S. Army Corps of Engineers, Albuquerque District and the U.S. Fish and Wildlife Service New Mexico Fish and Wildlife Conservation Office in Albuquerque, New Mexico, evaluated the physical characteristics and fish assemblage composition of available mesohabitats over a range of streamflows at 15 sites on the Middle Rio Grande in New Mexico. The fish assemblage of the Middle Rio Grande includes several minnow species adapted to hydrologically variable but seasonably predictable rivers, including the Hybognathus amarus (Rio Grande silvery minnow), a federally listed endangered species. Gaining a better understanding of habitat usage by the Rio Grande silvery minnow was the impetus for studying physical characteristics and fish assemblages in the Middle Rio Grande during different streamflow conditions. Data were collected at all 15 sites during winter 2011&ndash;12 (moderate streamflow), and a subset was collected at the 13 most downstream sites in summer 2012 (low streamflow). Sites were grouped into four river reaches separated by diversion dams listed in downstream order (names of the diversion dams are followed by short names of the sites nearest each dam in parentheses, listed in downstream order): (1) Cochiti (Pe&ntilde;a Blanca), (2) Angostura (Bernalillo, La Orilla, Barelas, Los Padillas), (3) Isleta (Los Lunas I, Los Lunas II, Abeytas, La Joya, Rio Salado), and (4) San Acacia (Lemitar, Arroyo del Tajo, San Pedro, Bosque del Apache I, and Bosque del Apache II). Stream habitat was mapped in the field by using a geographic information system in conjunction with a Global Positioning System. Fish assemblage composition was determined during both streamflow regimes, and fish were collected by seining in each mesohabitat where physical characteristic data (depth, velocity, dominant substrate type and size, and percent embeddedness) and water-quality properties (temperature, dissolved oxygen, specific conductance, and pH; during summer 2012 only) were measured. Nineteen species of fish were collected among the 15 sites and four reaches over both sampling periods; 10 of these 19 species are introduced. Fish-species richness (total number of fish species collected at each site during each sampling event) among sites that were sampled during both sampling periods ranged from 6 at Rio Salado to 12 at La Orilla. Fish were most abundant at the Lemitar site (1,786 individuals) and least abundant at the San Pedro site (275 individuals). The native Cyprinella lutrensis (red shiner) was the most abundant species collected among all of the sites, accounting for about 42 percent of fish collected. Fish-species richness and catch per unit effort (CPUE) were higher (or equivalent) at all sites during summer 2012 compared to winter 2011&ndash;12. The relations between fish assemblage composition (that is, total abundance, which refers to the number of individuals of each species that were collected) and selected environmental variables (physical characteristic data collected at the mesohabitat scale [depth, velocity, and substrate particle size], and mesohabitat types) were explored by using canonical correspondence analysis. Environmental variables explained 8 percent (p=0.48) of the variability in the Middle Rio Grande fish assemblage during winter 2011&ndash;12, and Rio Grande silvery minnow were weakly associated with sand substrates, relatively moderate velocities (qualitative descriptors are derived from synthetic gradients extracted from CCAs), and relatively shallow depths. Environmental variables explained 14 percent (p < 0.01) of the variability in the Middle Rio Grande fish assemblage during summer 2012, when Rio Grande silvery minnow were associated with run mesohabitats, relatively high velocities, sand substrates, and relatively moderate depths. The mean fish-species richness was greater in summer 2012 than in winter 2011&ndash;12 for each mesohabitat type, and the overall fish-species richness across all mesohabitat types was 0.62 during winter 2011&ndash;12, compared to 1.49 during summer 2012. The highest mean CPUE during winter 2011&ndash;12 was in isolated pools (54.3 fish per 100 square meters [m 2 ]), whereas the lowest was in flats (18.9 fish per 100 m 2 ). Ranges in CPUE were higher in summer 2012 relative to winter 2011&ndash;12 in each mesohabitat type sampled. As in winter 2011&ndash;12, the highest mean CPUE during summer 2012 was in isolated pools (233 fish per 100 m 2 ), whereas the lowest was in flats (29.6 fish per 100 m 2 ). Overall mean CPUE per mesohabitat across all mesohabitat types was 29.1 fish per 100 m 2 during winter 2011&ndash;12 compared to 85.3 fish per 100 m 2 during summer 2012. Four species of minnows (red shiner, Rio Grande silvery minnow, Pimephales promelas [fathead minnow], and Platygobio gracilis [flathead chub]) were selected to compare preferred mesohabitat characteristics because all are small-bodied minnows and because more than 200 individuals of each of these species were collected. Red shiner were collected across the largest range of depths in both winter 2011&ndash;12 (0.02&ndash;4.31 feet [ft]) and summer 2012 (0.05&ndash;3.4 ft), as well as the largest range of velocities (0.0&ndash;4.31 feet per second [ft/s]) during winter 2011&ndash;12 among the four minnow species of interest. Rio Grande silvery minnow occurred in the narrowest range of depths (0.30&ndash;2.1 ft) during summer 2012, as well as the narrowest range of velocities in both winter 2011&ndash;12 (0.0&ndash;3.18 ft/s) and summer 2012 (0.02&ndash;1.51 ft/s). Water-quality properties were only collected during summer 2012, when low-streamflow conditions existed and water-quality properties were thought to be potentially most limiting to aquatic life. Area-weighted mean water temperatures tended to be higher at the sites that were sampled in August 2012 (25.57 degrees Celsius [&deg;C]) compared to June 2012 (24.61 &deg;C). The highest area-weighted mean water temperature at a given site (29.03 &deg;C) was measured at the Lemitar site on August 7, 2012, coincident with the lowest measured discharge (4.13 cubic feet per second [ft 3 /s]). Area-weighted mean dissolved oxygen concentrations tended to be lower in August (7.46 milligrams per liter [mg/L]) compared to June (8.33 mg/L). The highest area-weighted mean dissolved oxygen concentration (9.13 mg/L) was measured at the Lemitar site on August 7, 2012, and the lowest area-weighted mean dissolved oxygen concentration (6.23 mg/L) was measured at the Los Padillas site on August 10, 2012. Area-weighted specific conductance in the sites upstream from La Joya did not exceed 400 microsiemens per centimeter (&mu;S/cm) at 25 &deg;C, whereas the area-weighted mean specific conductance at La Joya (837 &mu;s/cm at 25 &deg;C), Rio Salado (857 &mu;s/cm at 25 &deg;C), and Lemitar (1,300 &mu;s/cm at 25 &deg;C) were all well above the average of the area-weighted means for the 10 remaining sites (433 &mu;s/cm at 25 &deg;C). Lower area-weighted mean pH values were measured at the 3 sites in and near Albuquerque (La Orilla, Barelas, and Los Padillas&mdash;7.98, 8.08, and 7.81, respectively) compared to any of the 10 remaining sites, which had an overall mean pH of 8.44.

New Mexico