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Melanie B. Prentice

Publications and source records attributed to Melanie B. Prentice.

2 recordsLinked to original sources

Vibrio pectenicida strain FHCF-3 is a causative agent of sea star wasting disease

More than 10 years following the onset of the sea star wasting disease (SSWD) epidemic, affecting over 20 asteroid species from Mexico to Alaska, the causative agent has been elusive. SSWD killed billions of the most susceptible species, sunflower sea stars ( Pycnopodia helianthoides ), initiating a trophic cascade involving unchecked urchin population growth and the widespread loss of kelp forests. Identifying the causative agent underpins the development of recovery strategies. Here we induced disease and subsequent mortality in exposure experiments using tissue extracts, coelomic fluid and effluent water from wasting sunflower sea stars, with no mortality in controls. Deep sequencing of diseased sea star coelomic fluid samples from experiments and field outbreaks revealed a dominant proportion of reads assigned to the bacterium Vibrio pectenicida . Fulfilling Koch’s postulates, V. pectenicida strain FHCF-3, cultured from the coelomic fluid of a diseased sunflower sea star, caused disease and mortality in exposed sunflower sea stars, demonstrating that it is a causative agent of SSWD. This discovery will enable recovery efforts for sea stars and the ecosystems affected by their decline by facilitating culture-based experimental research and broad-scale screening for pathogen presence and abundance in the laboratory and field.

Nature Ecology & Evolution

Metagenomic sequencing sheds light on microbes putatively associated with pneumonia-related fatalities of white-tailed deer (Odocoileus virginianus)

With emerging infectious disease outbreaks in human, domestic and wild animal populations on the rise, improvements in pathogen characterization and surveillance are paramount for the protection of human and animal health, as well as the conservation of ecologically and economically important wildlife. Genomics offers a range of suitable tools to meet these goals, with metagenomic sequencing facilitating the characterization of whole microbial communities associated with emerging and endemic disease outbreaks. Here, we use metagenomic sequencing in a case-control study to identify microbes in lung tissue associated with newly observed pneumonia-related fatalities in 34 white-tailed deer ( Odocoileus virginianus ) in Wisconsin, USA. We identified 20 bacterial species that occurred in more than a single individual. Of these, only Clostridium novyi was found to substantially differ (in number of detections) between case and control sample groups; however, this difference was not statistically significant. We also detected several bacterial species associated with pneumonia and/or other diseases in ruminants ( Mycoplasma ovipneumoniae , Trueperella pyogenes , Pasteurella multocida , Anaplasma phagocytophilum , Fusobacterium necrophorum ); however, these species did not substantially differ between case and control sample groups. On average, we detected a larger number of bacterial species in case samples than controls, supporting the potential role of polymicrobial infections in this system. Importantly, we did not detect DNA of viruses or fungi, suggesting that they are not significantly associated with pneumonia in this system. Together, these results highlight the utility of metagenomic sequencing for identifying disease-associated microbes. This preliminary list of microbes will help inform future research on pneumonia-associated fatalities of white-tailed deer.

Microbial Genomics