Geology topics

Matthew A. Bowker

Publications and source records attributed to Matthew A. Bowker.

At least 19 recordsLinked to original sources

USGS2026

Fluvially-sourced sediment supply and climate modulate morphodynamics and state transitions in bistable aeolian dunefields

Alternative stable state theory in aeolian geomorphology describes the occurrence of bare and vegetated aeolian dunes in response to long-term climatic and ecological drivers. Transitions between states, as well as their co-occurrence (bistability), can arise from perturbations to drivers, disturbance, and associated biophysical feedbacks. Here, we examine the role of upwind fluvial sediment disturbance as a driver of aeolian state transitions. We analyze 24 source-bordering aeolian dunefields along 400 km of the Colorado River in Grand Canyon, USA, where active and inactive aeolian dune states occur downwind of fluvial sediment sources. Four decades of topographic change detection following upstream dam emplacement revealed that active aeolian dunes—which had indicators of recent aeolian transport—experienced four times more surface change than inactive dunes lacking such indicators of recent aeolian transport. Persistent aeolian activity occurred where bare upwind fluvial sandbars were maintained as sediment sources, whereas transitions toward inactivity accompanied the loss of bare sandbars and resulted in 50% less topographic change. Contrary to theory, the transition to aeolian inactivity did not correspond to significant reductions in erosion, despite decreased topographic changes. These results broadly demonstrate the effects of biophysical feedbacks within fluvially sourced aeolian environments. Specifically, they show that reductions in aeolian activity are not synonymous with geomorphic quiescence, as other sedimentary processes may become dominant agents of change within these coupled sedimentary systems that are ubiquitous throughout dryland regions on Earth.

Arizona↗

USGS2026

Biocrust restoration in novel climates: Assisted migration, habitat amelioration, and varied community composition as climate-smart techniques

Introduction Successful restoration of terrestrial drylands depends on stable, fertile soils that retain water. These functions are provided by biological soil crusts (biocrust), suggesting their reestablishment is a critical step in dryland restoration. Restoration may be hindered by the increasingly documented negative effects of climate change, while new climate-smart biocrust restoration methods may improve short- and long-term restoration outcomes. Objectives In this study, we evaluated three approaches to climate-smart biocrust restoration: assisted migration, habitat amelioration via shading, and varied community composition. Methods We collected biocrusts from across wide geographic gradients spanning multiple climate regimes, including wide ranges of mean annual temperature, mean annual precipitation, and precipitation seasonality. We used biocrust from these different environments as inoculum in two common garden restoration trials, in a research greenhouse testing shading and drying, and at a rangeland field site evaluating shading and warming. Results Community composition was related to climate across the natal (inoculum source) sites, and differences in the initial proportion of moss, lichen, and cyanobacteria resulted in different responses to experimental restoration treatments. We found mixed support for the efficacy of assisted migration and likely not enough success to outweigh the potential risks at present. Shading facilitated moss establishment even under warmer and drier conditions but inhibited lichen establishment and had little effect on cyanobacteria, which colonized quickly between mosses and lichens. Conclusion Overall, our results suggest several potential paths forward for biocrust restoration in warming drylands.

western United States↗

USGS2026

Functional restructuring of the global soil microbiome under multiple stressors

Microbes, as the planet’s most abundant and diverse organisms, drive soil functions globally and are vulnerable to environmental stressors triggered by global change. Yet, knowledge regarding the impacts of multiple environmental stressors on their functional profiles as well as the consequences for soil functionality largely remains unknown. Here, we analyze two global-scale datasets including information on soil metagenomics and multiple environmental stressors. We find that across terrestrial ecosystems worldwide, up to 60% of all functional genes significantly shift when soil microbes experience the high-level of concurrent stressors. In this regard, the relative abundances of genes involved in microbial growth are negatively linked to the increasing number of stressors. Conversely, those genes linked to stress resistance and energy production exhibit positive responses. Taken together, our findings highlight a significant restructuring of global soil functional microbiomes in response to multiple environmental stressors. Consequently, such restructuring drives community-level shifts in matter and energy reallocations, thereby impacting the maintenance of soil functionality under the projected global change.

Nature Communications↗

USGS2026

Abiotic and biotic controls of non-native perennial plant success in drylands

Drivers of non-native plant success in drylands are poorly understood. Here we identify functional differences between dryland native and non-native perennial plants and assess how biotic, abiotic and anthropogenic factors shape the success of the latter. On the basis of plant community and functional trait data from 98 sites across 25 countries, we report a total of 41 non-native plant species at 31 sites. Non-natives tend towards faster growth strategies than natives. Non-native plant richness is higher at sites with greater grazing pressure and under environmental conditions associated with higher soil fertility, decomposition and fungal richness—conditions that tend to occur in less arid regions—and lower where native plant and herbivore richness are greater. Non-native plant cover correlates positively with grazing pressure and negatively with native plant richness. Taken together, our results suggest that non-native plant success in drylands is facilitated when high grazing pressure coincides with elevated resource availability. Such context-dependence of non-native plant success and linkages with native plant and herbivore diversity highlight the need for managing grazing and conserving biodiversity across the world’s drylands.

Nature Ecology and Evolution↗

USGS2025

Developing biocrust field cultivation techniques for soil restoration: An assessment of bacterial communities

Biological soil crusts (biocrusts) are a coherent, thin soil surface layer, engineered and inhabited by a diverse community of moss, lichen, cyanobacteria, and other microorganisms. Biocrusts provide critical functions in dryland systems and may be lost from the ecosystem through physical disturbance or other global change drivers. Once biocrusts are lost, natural recovery can occur very slowly. This has led to the development of biocrust rehabilitation strategies, including cultivation of biocrust propagules to inoculate degraded sites. As the need for biocrust restoration grows in scale and across different regions, inoculum cultivation and application methods are being asked to keep up. In this work, we evaluate cyanobacterial community composition and abundance in greenhouse and field cultivation systems, with and without growth substrate and shade treatments. We also consider cultivation of locally and non-locally sourced biocrust inocula at a single cultivation facility on the Colorado Plateau. We found that field cultivation is a viable option for biocrust cultivation. For almost all cyanobacteria, habitat amelioration was necessary for growth in the field. Despite differences in inocula composition following cultivation, restoration outcomes five months after inoculation were poor with no significant increases in cyanobacterial abundance, soil chlorophyll a , or soil exopolysaccharide content. Thus, more work is needed to boost the initial growth and survival of biocrust inocula, regardless of the method of cultivation (i.e., greenhouse or field). Future work focused on assessing opportunities for habitat amelioration during application to improve biocrust establishment during this critical restoration phase would be highly valuable.

Utah↗

USGS2024

Unforeseen plant phenotypic diversity in a dry and grazed world

Earth harbours an extraordinary plant phenotypic diversity 1 that is at risk from ongoing global changes 2 , 3 . However, it remains unknown how increasing aridity and livestock grazing pressure—two major drivers of global change 4 , 5 , 6 —shape the trait covariation that underlies plant phenotypic diversity 1 , 7 . Here we assessed how covariation among 20 chemical and morphological traits responds to aridity and grazing pressure within global drylands. Our analysis involved 133,769 trait measurements spanning 1,347 observations of 301 perennial plant species surveyed across 326 plots from 6 continents. Crossing an aridity threshold of approximately 0.7 (close to the transition between semi-arid and arid zones) led to an unexpected 88% increase in trait diversity. This threshold appeared in the presence of grazers, and moved toward lower aridity levels with increasing grazing pressure. Moreover, 57% of observed trait diversity occurred only in the most arid and grazed drylands, highlighting the phenotypic uniqueness of these extreme environments. Our work indicates that drylands act as a global reservoir of plant phenotypic diversity and challenge the pervasive view that harsh environmental conditions reduce plant trait diversity 8 , 9 , 10 . They also highlight that many alternative strategies may enable plants to cope with increases in environmental stress induced by climate change and land-use intensification.

Nature↗

USGS2024

Vulnerability of mineral-associated soil organic carbon to climate across global drylands

Mineral-associated organic carbon (MAOC) constitutes a major fraction of global soil carbon and is assumed less sensitive to climate than particulate organic carbon (POC) due to protection by minerals. Despite its importance for long-term carbon storage, the response of MAOC to changing climates in drylands, which cover more than 40% of the global land area, remains unexplored. Here we assess topsoil organic carbon fractions across global drylands using a standardized field survey in 326 plots from 25 countries and 6 continents. We find that soil biogeochemistry explained the majority of variation in both MAOC and POC. Both carbon fractions decreased with increases in mean annual temperature and reductions in precipitation, with MAOC responding similarly to POC. Therefore, our results suggest that ongoing climate warming and aridification may result in unforeseen carbon losses across global drylands, and that the protective role of minerals may not dampen these effects.

Nature Climate Change↗

USGS2024

Hotspots of biogeochemical activity linked to aridity and plant traits across global drylands

Perennial plants create productive and biodiverse hotspots, known as fertile islands, beneath their canopies. These hotspots largely determine the structure and functioning of drylands worldwide. Despite their ubiquity, the factors controlling fertile islands under conditions of contrasting grazing by livestock, the most prevalent land use in drylands, remain virtually unknown. Here we evaluated the relative importance of grazing pressure and herbivore type, climate and plant functional traits on 24 soil physical and chemical attributes that represent proxies of key ecosystem services related to decomposition, soil fertility, and soil and water conservation. To do this, we conducted a standardized global survey of 288 plots at 88 sites in 25 countries worldwide. We show that aridity and plant traits are the major factors associated with the magnitude of plant effects on fertile islands in grazed drylands worldwide. Grazing pressure had little influence on the capacity of plants to support fertile islands. Taller and wider shrubs and grasses supported stronger island effects. Stable and functional soils tended to be linked to species-rich sites with taller plants. Together, our findings dispel the notion that grazing pressure or herbivore type are linked to the formation or intensification of fertile islands in drylands. Rather, our study suggests that changes in aridity, and processes that alter island identity and therefore plant traits, will have marked effects on how perennial plants support and maintain the functioning of drylands in a more arid and grazed world.

Nature Plants↗

USGS2024

Inoculated biocrust cover and functions diverged over a gradient of soil textures and water availability

Restoring biological crust (biocrust) in disturbed drylands is challenging due to the difficult environmental conditions, such as limited soil moisture, low soil nutrients, and extreme temperatures, that impede growth. Understanding how the key components of biocrust—mosses, lichens, and cyanobacteria—react to different environmental factors informs the optimal timing, locations, and species composition for biocrust reintroduction, thereby increasing the likelihood of establishment. Here, we inoculated soils with a diverse range of biocrust organisms, analogous to seeding an area with diverse vascular plant seeds, and varied environmental conditions to observe how these changes influenced the development and functions of reintroduced biocrust. We found that by manipulating soil texture and time spent wet, we can change the proportional cover of biocrust within a restoration-like setting. Specifically, we found that 4 months after inoculation, finer textured soils that received more water become dominated by moss cover, while coarser textured soils with less water remained dominated by cyanobacteria cover, and the interactions between texture and time spent wet strongly influenced cover. We found biocrust morphological group cover had a small, but detectable, effect on ecosystem functions (soil stability and nitrogenase activity, a proxy for nitrogen fixation), but that environmental conditions had a stronger impact on the functions we measured. Manipulative experiments in controlled environments, like this one, can help elucidate the mechanisms underlying the establishment rate and patterns of biocrusts post-inoculation, and inform implementation of inoculations in the field.

New Mexico↗

USGS2024

Do topographic changes tell us about variability in aeolian sediment transport and dune mobility? Analysis of monthly to decadal surface changes in a partially vegetated and biocrust covered dunefield

Vegetation and biological soil crust (biocrust) cover can have a stabilizing effect on dunes by fixing sediment in-place and increasing surface roughness, thus limiting dune mobility, sediment transport, and erosion. These biological effects influence rates of aeolian activity and thus surficial changes, though variability in wind and sediment supply may obscure these topographic effects. In this study, we compare monthly measures of sediment transport and decadal estimates of dune mobility to repeat topographic changes measured as a net volume change in sediment storage (difference in volume between all positive and negative topographic changes) and total volume change (absolute summed volume of all positive and negative changes) for areas of bare, vegetated, and biocrusted sand within a dunefield with limited sediment supply and unimodal winds. We found that monthly net volume changes normalized by area were similar between bare sand and sand with at least 20 % vegetation cover. However, total volume change was significantly greater for bare sand and correlated with monthly sediment flux estimates (R2 = 0.46), though the relationship was significantly improved by including monthly changes in surface roughness (R2 = 0.8). Longer-term decadal trends in topographic change showed larger total volume changes with the greatest decreases in vegetation canopy cover. Additionally, decadal total volume changes strongly correlated with estimates of dune mobility (R2 = 0.99). We also found that increased total volume changes did not necessarily signal increased net volume changes for all land cover types. Specifically, increases in total volume change for bare sand resulted in near equal or lower net volume changes, as both positive (deposition) and negative (erosion) change increased with sediment transport. Conversely, less mobile land covers, such as biocrust covered sand, increased in erosion without significant increases in total volume change, demonstrating that more stable surfaces might exhibit a larger topographic change imbalance than mobile sediment surfaces under the same conditions. This study highlights the importance of considering multiple measures of topographic change for interpreting sediment mobility, transport, and availability. Additionally, we hypothesize a novel framework for remote sensing-based empirical studies aimed at interpreting aeolian landscape evolution resulting from climate change effects on weather as well as biological controls such as vegetation and biocrusts.

Arizona↗

USGS2024

Drivers of woody dominance across global drylands

Increases in the abundance of woody species have been reported to affect the provisioning of ecosystem services in drylands worldwide. However, it is virtually unknown how multiple biotic and abiotic drivers, such as climate, grazing, and fire, interact to determine woody dominance across global drylands. We conducted a standardized field survey in 304 plots across 25 countries to assess how climatic features, soil properties, grazing, and fire affect woody dominance in dryland rangelands. Precipitation, temperature, and grazing were key determinants of tree and shrub dominance. The effects of grazing were determined not solely by grazing pressure but also by the dominant livestock species. Interactions between soil, climate, and grazing and differences in responses to these factors between trees and shrubs were key to understanding changes in woody dominance. Our findings suggest that projected changes in climate and grazing pressure may increase woody dominance in drylands, altering their structure and functioning.

Science Advances↗

USGS2023

Cultivating resilience in dryland soils: An assisted migration approach to biological soil crust restoration

Land use practices and climate change have driven substantial soil degradation across global drylands, impacting ecosystem functions and human livelihoods. Biological soil crusts, a common feature of dryland ecosystems, are under extensive exploration for their potential to restore the stability and fertility of degraded soils through the development of inoculants. However, stressful abiotic conditions often result in the failure of inoculation-based restoration in the field and may hinder the long-term success of biocrust restoration efforts. Taking an assisted migration approach, we cultivated biocrust inocula sourced from multiple hot-adapted sites (Mojave and Sonoran Deserts) in an outdoor facility at a cool desert site (Colorado Plateau). In addition to cultivating inoculum from each site, we created an inoculum mixture of biocrust from the Mojave Desert, Sonoran Desert, and Colorado Plateau. We then applied two habitat amelioration treatments to the cultivation site (growth substrate and shading) to enhance soil stability and water availability and reduce UV stress. Using marker gene sequencing, we found that the cultivated mixed inoculum comprised both local- and hot-adapted cyanobacteria at the end of cultivation but had similar cyanobacterial richness as each unmixed inoculum. All cultivated inocula had more cyanobacterial 16S rRNA gene copies and higher cyanobacterial richness when cultivated with a growth substrate and shade. Our work shows that it is possible to field cultivate biocrust inocula sourced from different deserts, but that community composition shifts toward that of the cultivation site unless habitat amelioration is employed. Future assessments of the function of a mixed inoculum in restoration and its resilience in the face of abiotic stressors are needed to determine the relative benefit of assisted migration compared to the challenges and risks of this approach.

Arizona, California, Utah↗

USGS2022

What is a biocrust? A refined, contemporary definition for a broadening research community

Studies of biological soil crusts (biocrusts) have proliferated over the last few decades. The biocrust literature has broadened, with more studies assessing and describing the function of a variety of biocrust communities in a broad range of biomes and habitats and across a large spectrum of disciplines, and also by the incorporation of biocrusts into global perspectives and biogeochemical models. As the number of biocrust researchers increases, along with the scope of soil communities defined as ‘biocrust’, it is worth asking whether we all share a clear, universal, and fully articulated definition of what constitutes a biocrust. In this review, we synthesize the literature with the views of new and experienced biocrust researchers, to provide a refined and fully elaborated definition of biocrusts. In doing so, we illustrate the ecological relevance and ecosystem services provided by them. We demonstrate that biocrusts are defined by four distinct elements: physical structure, functional characteristics, habitat, and taxonomic composition. We describe outgroups, which have some, but not all, of the characteristics necessary to be fully consistent with our definition and thus would not be considered biocrusts. We also summarize the wide variety of different types of communities that fall under our definition of biocrusts, in the process of highlighting their global distribution. Finally, we suggest the universal use of the Belnap, Büdel & Lange definition, with minor modifications: Biological soil crusts (biocrusts) result from an intimate association between soil particles and differing proportions of photoautotrophic (e.g. cyanobacteria , algae , lichens , bryophytes) and heterotrophic (e.g. bacteria , fungi , archaea) organisms , which live within , or immediately on top of , the uppermost millimetres of soil. Soil particles are aggregated through the presence and activity of these often extremotolerant biota that desiccate regularly , and the resultant living crust covers the surface of the ground as a coherent layer. With this detailed definition of biocrusts, illustrating their ecological functions and widespread distribution, we hope to stimulate interest in biocrust research and inform various stakeholders (e.g. land managers, land users) on their overall importance to ecosystem and Earth system functioning.

Biological Reviews↗

USGS2022

Grazing and ecosystem service delivery in global drylands

Grazing represents the most extensive use of land worldwide. Yet its impacts on ecosystem services remain uncertain because pervasive interactions between grazing pressure, climate, soil properties, and biodiversity may occur but have never been addressed simultaneously. Using a standardized survey at 98 sites across six continents, we show that interactions between grazing pressure, climate, soil, and biodiversity are critical to explain the delivery of fundamental ecosystem services across drylands worldwide. Increasing grazing pressure reduced ecosystem service delivery in warmer and species-poor drylands, whereas positive effects of grazing were observed in colder and species-rich areas. Considering interactions between grazing and local abiotic and biotic factors is key for understanding the fate of dryland ecosystems under climate change and increasing human pressure.

Science↗

USGS2021

Broader impacts for ecologists: Biological soil crust as a model system for education

Biological soil crusts (biocrusts) are a complex community of algae, cyanobacteria, lichens, bryophytes, and assorted bacteria, fungi, archaea, and bacteriophages that colonize the soil surface. Biocrusts are particularly common in drylands and are found in arid and semiarid ecosystems worldwide. While diminutive in size, biocrusts often cover large terrestrial areas, provide numerous ecosystem benefits, enhance biodiversity, and are found in multiple configurations and assemblages across different climate and disturbance regimes. Biocrusts have been a focus of many ecologists, especially those working in semiarid and arid lands, as biocrusts are foundational community members, play fundamental roles in ecosystem processes, and offer rare opportunities to study biological interactions at small and large spatial scales. Due to these same characteristics, biocrusts have the potential to serve as an excellent teaching tool. The purpose of this paper is to demonstrate the utility of biocrust communities as a model system in science education. Functioning as portable, dynamic mini ecosystems, biocrusts can be used to teach about organisms, biodiversity, biotic interactions, abiotic controls, ecosystem processes, and even global change, and can be easy to use in nearly every classroom setup. For example, education principles, such as evolution and adaptation to stress, or structure and function (patterns and processes) can be applied by bringing biocrusts into the classroom as a teaching tool. In addition, discussing the utility of biocrusts in the classroom – including theory, hypothesis testing, experimentation, and hands-on learning – this document also provides tips and resources for developing education tools and activities geared toward impactful learning.

Frontiers in Microbiology↗

USGS2021

Biocrust and the soil surface: Influence of climate, disturbance, and biocrust recovery on soil surface roughness

Biocrust communities promote soil surface roughness, a key functional characteristic for soil ecology. However, the spatial scales at which biocrust communities contribute to surface roughness are not well understood. To refine our understanding of the spatial dynamics between biocrust and soil surface roughness, we used mm-resolution terrestrial LiDAR to measure micro-topographic roughness at seven sub-meter, 3-dimensional kernels (spatial scales) for undisturbed and disturbed biocrusts within the cool Great Basin and the hot Chihuahuan Deserts of western North America. This multi-scalar approach applied within the different desert regions allowed us to explore two objectives: 1) assess the relative importance of climate and disturbance on biocrust roughness, and 2) evaluate how soil surface roughness evolves with biocrust recovery. For objective 1, we found that undisturbed cool desert biocrust was up to three times rougher than hot desert biocrust. Much of the difference in roughness between the two desert biocrust communities appeared to be from climate or other regional factors. However, positive correlations between roughness and biocrust indicators, including soil chlorophyll-a and the field-based Level of Development (LOD) index, suggested that differences in roughness at spatial scales ≤ 10 cm are directly related to biocrust development. Mechanical disturbance aimed at removing biocrust resulted in significant reductions in roughness and removed much of the observed differences in roughness between cool and hot desert soils. We evaluated biocrust recovery within the cool desert study area two years after mechanical disturbance and found that the disturbed soil increased in roughness up-to 300%. The increased surface roughness at spatial scales ≤ 10 cm were positively correlated with increased aggregate stability and indicators of biocrust reestablishment. We found that topographic change area was also an important contributor to roughness at all spatial scales, particularly at spatial scales ≥ 20 cm where it was the most important factor evaluated. These results provide insight into how biocrust interacts with other biophysical processes to influence soil surface roughness and how soil surfaces evolve at time scales relevant to soil restoration activities.

New Mexico, Utah↗

USGS2020

The pervasive and multifaceted influence of biocrusts on water in the world’s drylands

The capture and use of water are critically important in drylands, which collectively constitute Earth's largest biome. Drylands will likely experience lower and more unreliable rainfall as climatic conditions change over the next century. Dryland soils support a rich community of microphytic organisms (biocrusts), which are critically important because they regulate the delivery and retention of water. Yet despite their hydrological significance, a global synthesis of their effects on hydrology is lacking. We synthesized 2,997 observations from 109 publications to explore how biocrusts affected five hydrological processes (times to ponding and runoff, early [sorptivity] and final [infiltration] stages of water flow into soil, and the rate or volume of runoff) and two hydrological outcomes (moisture storage, sediment production). We found that increasing biocrust cover reduced the time for water to pond on the surface (−40%) and commence runoff (−33%), and reduced infiltration (−34%) and sediment production (−68%). Greater biocrust cover had no significant effect on sorptivity or runoff rate/amount, but increased moisture storage (+14%). Infiltration declined most (−56%) at fine scales, and moisture storage was greatest (+36%) at large scales. Effects of biocrust type (cyanobacteria, lichen, moss, mixed), soil texture (sand, loam, clay), and climatic zone (arid, semiarid, dry subhumid) were nuanced. Our synthesis provides novel insights into the magnitude, processes, and contexts of biocrust effects in drylands. This information is critical to improve our capacity to manage dwindling dryland water supplies as Earth becomes hotter and drier.

Global Change Biology↗

USGS2020

Inoculation and habitat amelioration efforts in biological soil crust recovery vary by desert and soil texture

As dryland degradation continues, it is increasingly important to understand how to effectively restore biocrust communities. Potential techniques include the addition of biocrust inoculum to accelerate biocrust recovery. Enhanced erosion typical of degraded environments creates a challenge for these approaches, due to loss by wind or water and burial by saltating particles. To retain and protect added inoculum, the inclusion of habitat‐amelioration techniques can improve recovery rates. This study tested three different types of inoculum (field‐collected, greenhouse‐cultivated, and laboratory‐cultivated biocrust) coupled with two treatments to augment soil stability and ameliorate habitat limitations: soil surface polyacrylamide additions and installation of straw barriers. This was done across two deserts (Great Basin and Chihuahuan) and separated into generally coarse‐ or finer‐textured soils in each desert, with results monitored for 3 years (2015, 2016, 2017). While the inoculum type, coupled with habitat ameliorations, occasionally enhanced biocrust growth across years and treatments, in other cases, it made no difference compared to natural recovery rates. Rather, the desert location and soil texture groupings were the most prominent factors in determining recovery trajectories. Recovery proportions were similar in the finer‐textured sites in both the Great Basin and the Chihuahuan deserts, while the coarser‐textured site in the Great Basin did show some recovery over time and the Chihuahuan coarser‐textured site did not. This study demonstrates the importance of understanding site potential and identifying key limitations to biocrust recovery for successful restoration projects.

New Mexico, Texas↗