Geology topics

Mary K. Lindenberg

Publications and source records attributed to Mary K. Lindenberg.

9 recordsLinked to original sources

USGS2010

Water-Quality Data from Upper Klamath and Agency Lakes, Oregon, 2007-08

Significant Findings The U.S. Geological Survey Upper Klamath Lake water-quality monitoring program collected data from multiparameter continuous water-quality monitors, weekly water-quality samples, and meteorological stations during May-November 2007 and 2008. The results of these measurements and sample analyses are presented in this report for 29 stations on Upper Klamath Lake and 2 stations on Agency Lake, as well as quality-assurance data for the water-quality samples. Some of the significant findings from 2007 and 2008 are listed below. In 2007-08, ammonia concentrations were at or near the detection limit at all stations during the second week in June, after which they began to increase, with peak concentrations occurring from July through November. The concentration of un-ionized ammonia, which can be toxic to aquatic life, first began to increase in mid-June and peaked in July or August at most sites. Concentrations of un-ionized ammonia measured in the Upper Klamath Lake in 2007-08 did not reach concentrations that would have been potentially lethal to suckers. Samples collected for the analysis of dissolved organic carbon (DOC) late in the 2007 season showed no evidence of an increase in DOC subsequent to the breaching of the Williamson River Delta levees on October 30. In 2007-08, the lakewide daily median of dissolved oxygen concentration began to increase in early June, and peaked in mid- to late June. The lakewide daily median pH began to increase from early June and peaked in late June (2007) or early July (2008). Lakewide daily median pH slowly decreased during the rest of both seasons. The 2007 lakewide daily median specific conductance values first peaked on July 1, coincident with a peak in dissolved oxygen concentration and pH, followed by a decrease through mid-July. Specific conductance then remained relatively stable until mid-October when a sharp increase began that continued until the end of the season. Lakewide specific conductance values for 2008 steadily increased through the season to a maximum in late September. Lakewide daily median temperatures in both years began to increase during the beginning of June and peaked in July. These temperatures persisted until late August to early September when a gradual decrease occurred. In 2007-08, water-quality conditions monitored at the Agency Lake northern and southern stations were similar to those in Klamath Lake.

Open-File Report↗

USGS2009

Water Quality of a Drained Wetland, Caledonia Marsh on Upper Klamath Lake, Oregon, after Flooding in 2006

The unexpected inundation of Caledonia Marsh, a previously drained wetland adjacent to Upper Klamath Lake, Oregon, provided an opportunity to observe nutrient release from sediments into the water column of the flooded area and the resulting algal growth. Three sites, with differing proximity to the levee breach that reconnected the area to Upper Klamath Lake, were selected for water sample collection in the marsh. Chlorophyll a concentrations (an indicator of algal biomass) were lowest and dissolved nutrient concentrations were highest at the site farthest from the breach. At the site where chlorophyll a concentrations were lowest, dissolved organic carbon concentrations were highest, and the presence of tannic compounds was indicated by the dark brown color of the water. Both DOC and specific conductance was higher at the site farthest from the breach, which indicated less mixing with Upper Klamath Lake water at that site. Dissolved oxygen concentrations and pH were lowest at the beginning of the sampling period at the site farthest from the levee breach, coincident with the lowest algal growth. Phosphorus concentrations measured in the flooded Caledonia Marsh were greater than median concentrations in Upper Klamath Lake, indicating that phosphorus likely was released from the previously drained wetland soils of the marsh when they were flooded. However, a proportional increase in algal biomass was not measured either in the marsh or in the adjacent bay of the lake. Nitrogen to phosphorus ratios indicated that phosphorus was not limiting to algal growth at the marsh sites, and possibly was not limiting in the adjacent bay either. In terms of nutrient dynamics, wetlands normally function as nutrient sinks. In contrast, the drained wetlands around Upper Klamath Lake cannot be expected to provide that function in the short term after being flooded and may, in fact, be a source of nutrients to the lake instead. The consequences for algal growth in the lake, however, seem to be small.

Scientific Investigations Report↗

USGS2008

Water Quality Conditions in Upper Klamath and Agency Lakes, Oregon, 2005

During June-October 2005, water quality data were collected from Upper Klamath and Agency Lakes in Oregon, and meteorological data were collected around and within Upper Klamath Lake. Data recorded at two continuous water quality monitors in Agency Lake showed similar temperature patterns throughout the field season, but data recorded at the northern site showed more day-to-day variability for dissolved oxygen concentration and saturation after late June and more day-to-day variability for pH and specific conductance values after mid-July. Data recorded from the northern and southern parts of Agency Lake showed more comparable day-to-day variability in dissolved oxygen concentrations and pH from September through the end of the monitoring period. For Upper Klamath Lake, seasonal (late July through early August) lows of dissolved oxygen concentrations and saturation were coincident with a seasonal low of pH values and seasonal highs of ammonia and orthophosphate concentrations, specific conductance values, and water temperatures. Patterns in these parameters, excluding water temperature, were associated with bloom dynamics of the cyanobacterium (blue-green alga) Aphanizomenon flos-aquae in Upper Klamath Lake. In Upper Klamath Lake, water temperature in excess of 28 degrees Celsius (a high stress threshold for Upper Klamath Lake suckers) was recorded only once at one site during the field season. Large areas of Upper Klamath Lake had periods of dissolved oxygen concentration of less than 4 milligrams per liter and pH value greater than 9.7, but these conditions were not persistent throughout days at most sites. Dissolved oxygen concentrations in Upper Klamath Lake on time scales of days and months appeared to be influenced, in part, by bathymetry and prevailing current flow patterns. Diel patterns of water column stratification were evident, even at the deepest sites. This diel pattern of stratification was attributable to diel wind speed patterns and the shallow nature of most of Upper Klamath Lake. Timing of the daily extreme values of dissolved oxygen concentration, pH, and water temperature was less distinct with increased water column depth. Chlorophyll a concentrations varied spatially and temporally throughout Upper Klamath Lake. Location greatly affected algal concentrations, in turn affecting nutrient and dissolved oxygen concentrations - some of the highest chlorophyll a concentrations were associated with the lowest dissolved oxygen concentrations and the highest un-ionized ammonia concentrations. The occurrence of the low dissolved oxygen and high un-ionized ammonia concentrations coincided with a decline in algae resulting from cell death, as measured by concentrations of chlorophyll a. Dissolved oxygen production rates in experiments were as high as 1.47 milligrams of oxygen per liter per hour, and consumption rates were as much as -0.73 milligrams of oxygen per liter per hour. Dissolved oxygen consumption rates measured in this study were comparable to those measured in a 2002 Upper Klamath Lake study, and a higher rate of dissolved oxygen consumption was recorded in dark bottles positioned higher in the water column. Data, though inconclusive, indicated that a decreasing trend of dissolved oxygen productivity through July could have contributed to the decreasing dissolved oxygen concentrations and percent saturation recorded in Upper Klamath Lake during this time. Phytoplankton self-shading was evident from a general inverse relation between depth of photic zone and chlorophyll a concentrations. This shading caused net dissolved oxygen consumption during daylight hours in lower parts of the water column that would otherwise have been in the photic zone. Meteorological data collected in and around Upper Klamath Lake showed that winds were likely to come from a broad range of westerly directions in the northern one-third of the lake, but tended to come from a narrow range of northwesterly directions

Scientific Investigations Report↗

USGS2008

Modeling hydrodynamics and heat transport in Upper Klamath Lake, Oregon, and implications for water quality

The three-dimensional numerical model UnTRIM was used to model hydrodynamics and heat transport in Upper Klamath Lake, Oregon, between mid-June and mid-September in 2005 and between mid-May and mid-October in 2006. Data from as many as six meteorological stations were used to generate a spatially interpolated wind field to use as a forcing function. Solar radiation, air temperature, and relative humidity data all were available at one or more sites. In general, because the available data for all inflows and outflows did not adequately close the water budget as calculated from lake elevation and stage-capacity information, a residual inflow or outflow was used to assure closure of the water budget. Data used for calibration in 2005 included lake elevation at 3 water-level gages around the lake, water currents at 5 Acoustic Doppler Current Profiler (ADCP) sites, and temperature at 16 water-quality monitoring locations. The calibrated model accurately simulated the fluctuations of the surface of the lake caused by daily wind patterns. The use of a spatially variable surface wind interpolated from two sites on the lake and four sites on the shoreline generally resulted in more accurate simulation of the currents than the use of a spatially invariant surface wind as observed at only one site on the lake. The simulation of currents was most accurate at the deepest site (ADCP1, where the velocities were highest) using a spatially variable surface wind; the mean error (ME) and root mean square error (RMSE) for the depth-averaged speed over a 37-day simulation from July 26 to August 31, 2005, were 0.50 centimeter per second (cm/s) and 3.08 cm/s, respectively. Simulated currents at the remaining sites were less accurate and, in general, underestimated the measured currents. The maximum errors in simulated currents were at a site near the southern end of the trench at the mouth of Howard Bay (ADCP7), where the ME and RMSE in the depth-averaged speed were 3.02 and 4.38 cm/s, respectively. The range in ME of the temperature simulations over the same period was –0.94 to 0.73 degrees Celsius (°C), and the RMSE ranged from 0.43 to 1.12°C. The model adequately simulated periods of stratification in the deep trench when complete mixing did not occur for several days at a time. The model was validated using boundary conditions and forcing functions from 2006 without changing any calibration parameters. A spatially variable wind was used. Data for the model validation periods in 2006 included lake elevation at 4 gages around the lake, currents collected at 2 ADCP sites, and temperature collected at 21 water-quality monitoring locations. Errors generally were larger than in 2005. ME and RMSE in the simulated velocity at ADCP1 were 2.30 cm/s and 3.88 cm/s, respectively, for the same 37-day simulation over which errors were computed for 2005. The ME in temperature over the same period ranged from –0.56 to 1.5°C and the RMSE ranged from 0.41 to 1.86°C. Numerical experiments with conservative tracers were used to demonstrate the prevailing clockwise circulation patterns in the lake, and to show the influence of water from the deep trench located along the western shoreline of the lake on fish habitat in the northern part of the lake. Because water exiting the trench is split into two pathways, the numerical experiments indicate that bottom water from the trench has a stronger influence on water quality in the northern part of the lake, and surface water from the trench has a stronger influence on the southern part of the lake. This may be part of the explanation for why episodes of low dissolved oxygen tend to be more severe in the northern than in the southern part of the lake.

Oregon↗

USGS2008

Water Quality Conditions in Upper Klamath and Agency Lakes, Oregon, 2006

The U.S. Geological Survey Upper Klamath Lake water quality monitoring program gathered information from multiparameter continuous water quality monitors, physical water samples, dissolved oxygen production and consumption experiments, and meteorological stations during the June-October 2006 field season. The 2006 study area included Agency Lake and all of Upper Klamath Lake. Seasonal patterns in water quality were similar to those observed in 2005, the first year of the monitoring program, and were closely related to bloom dynamics of the cyanobacterium (blue-green alga) Aphanizomenon flos-aquae (AFA) in the two lakes. High dissolved oxygen and pH conditions in both lakes before the bloom declined in July, which coincided with seasonal high temperatures and resulted in seasonal lows in dissolved oxygen and decreased pH. Dissolved oxygen and pH in Upper Klamath and Agency Lakes increased again after the bloom recovered. Seasonal low dissolved oxygen and decreased pH coincided with seasonal highs in ammonia and orthophosphate concentrations. Seasonal maximum daily average temperatures were higher and minimum dissolved oxygen concentrations were lower in 2006 than in 2005. Conditions potentially harmful to fish were influenced by seasonal patterns in bloom dynamics and bathymetry. Potentially harmful low dissolved oxygen and high un-ionized ammonia concentrations occurred mostly at the deepest sites in the Upper Klamath Lake during late July, coincident with a bloom decline. Potentially harmful pH conditions occurred mostly at sites outside the deepest parts of the lake in July and September, coincident with a heavy bloom. Instances of possible gas bubble formation, inferred from dissolved oxygen data, were estimated to occur frequently in shallow areas of Upper Klamath and Agency Lakes simultaneously with potentially harmful pH conditions. Comparison of the data from monitors in nearshore areas and monitors near the surface of the water column in the open waters of Upper Klamath Lake revealed few differences in water quality dynamics. Median daily temperatures were higher in nearshore areas, and dissolved oxygen concentrations were periodically higher as well during periods of high AFA bloom. Differences between the two areas in water quality conditions potentially harmful to fish were not statistically significant (p < 0.05). Chlorophyll a concentrations varied temporally and spatially throughout Upper Klamath Lake. Chlorophyll a concentrations indicated an algal bloom in late June and early July that was followed by an algae bloom decline in late July and early August and a subsequent recovery in mid-August. Sites in the deepest part of the lake, where some of the highest chlorophyll a concentrations were observed, were the same sites where the lowest dissolved oxygen concentrations and the highest un-ionized ammonia concentrations were recorded during the bloom decline, indicating cell senescence. Total phosphorus concentrations limited the initial algal bloom in late June and early July. The rate of net dissolved oxygen production (that is, production in excess of community respiration) and consumption (due to community respiration) in the lake water column as measured in light and dark bottles, respectively, ranged from 2.79 to -2.14 milligrams of oxygen per liter per hour. Net production rate generally correlated positively with chlorophyll a concentration, except episodically at a few sites where high chlorophyll a concentrations resulted in self-shading that inhibited photosynthesis. The depth of photic zone was inversely correlated with chlorophyll a concentration. Calculations of a 24-hour change in dissolved oxygen concentration indicated that oxygen-consuming processes predominated at the deep trench sites and oxygen-producing processes predominated at the shallow sites. In addition, calculations of the 24-hour change in dissolved oxygen indicate that oxygen-consuming processes in the water column di

Scientific Investigations Report↗

USGS2007

Quantifying the benthic source of nutrients to the water column of Upper Klamath Lake, Oregon

Executive Summary Five sampling trips were coordinated in April, May and August 2006, and May and July 2007 to sample the water column and benthos of Upper Klamath Lake, OR (Fig. 1; Table 1), before, during and after the annual cyanophyte bloom of Aphanizomenon flos-aquae (AFA). A pore-water profiler was designed and fabricated to obtain the first high-resolution (centimeter-scale) estimates of the vertical concentration gradients for diffusive-flux determinations. Estimates based on molecular diffusion may underestimate benthic flux because solute transport across the sediment-water interface can be enhanced by processes including bioturbation, bioirrigation and ground-water advection. Water-column and benthic samples were also collected to help interpret spatial and temporal trends in diffusive-flux estimates. Data from these samples complement geochemical analyses of bottom-sediments taken from Upper Klamath Lake (UKL) in 2005. This ongoing study provides information necessary for developing process-interdependent solute-transport models for the watershed (that is, models integrating physical, geochemical and biological processes), and supports efforts to evaluate remediation or load-allocation strategies. To augment studies funded by the U.S. Bureau of Reclamation (USBR), the Department of Interior supported an additional full deployment of pore-water profilers in July 2007, during the summer AFA bloom. Results from this recent field trip are not fully completed. Data not presented herein will be included in a subsequent publication, scheduled for March 2009.

Oregon↗

USGS2006

Enhanced submarine ground water discharge form mixing of pore water and estuarine water

Submarine ground water discharge is suggested to be an important pathway for contaminants from continents to coastal zones, but its significance depends on the volume of water and concentrations of contaminants that originate in continental aquifers. Ground water discharge to the Banana River Lagoon, Florida, was estimated by analyzing the temporal and spatial variations of Cl − concentration profiles in the upper 230 cm of pore waters and was measured directly by seepage meters. Total submarine ground water discharge consists of slow discharge at depths > ∼70 cm below seafloor (cmbsf) of largely marine water combined with rapid discharge of mixed pore water and estuarine water above ∼70 cmbsf. Cl − profiles indicate average linear velocities of ∼0.014 cm/d at depths > ∼70 cmbsf. In contrast, seepage meters indicate water discharges across the sediment-water interface at rates between 3.6 and 6.9 cm/d. The discrepancy appears to be caused by mixing in the shallow sediment, which may result from a combination of bioirrigation, wave and tidal pumping, and convection. Wave and tidal pumping and convection would be minor because the tidal range is small, the short fetch of the lagoon limits wave heights, and large density contacts are lacking between lagoon and pore water. Mixing occurs to ∼70 cmbsf, which represents depths greater than previously reported. Mixing of oxygenated water to these depths could be important for remineralization of organic matter.

Florida↗

USGS2006

Advection within shallow pore waters of a coastal lagoon, Florida

Ground water sources can be a significant portion of a local water budget in estuarine environments, particularly in areas with high recharge rates, transmissive aquifers, and permeable marine sediments. However, field measurements of ground water discharge are often incongruent with ground water flow modeling results, leaving many scientists unsure which estimates are accurate. In this study, we find that both measurements and model results are reasonable. The difference between estimates apparently results from the sources of water being measured and not the techniques themselves. In two locations in the Indian River Lagoon estuarine system, we found seepage meter rates similar to rates calculated from the geochemical tracers 222 Rn and 226 Ra. Ground water discharge rates ranged from 4 to 9 cm/d using seepage meters and 3 to 20 cm/d using 222 Rn and 226 Ra. In contrast, in comparisons to other studies where finite element ground water flow modeling was used, much lower ground water discharge rates of ∼0.05 to 0.15 cm/d were estimated. These low rates probably represent discharge of meteoric ground water from land-recharged aquifers, while the much higher rates measured with seepage meters, 222 Rn, and 226 Ra likely include an additional source of surface waters that regularly flush shallow (< 1 m depth) sediments. This resultant total flow of mixed land-recharged water and recirculated surface waters contributes to the total biogeochemical loading in this shallow estuarine environment.

Florida↗

USGS2006

Water-quality conditions in Upper Klamath Lake, Oregon, 2002-04

Eleven (2002) to 14 (2003 and 2004) continuous water-quality monitors that measured pH, dissolved oxygen, temperature, and specific conductance, were placed in Upper Klamath Lake to support a telemetry tracking study of endangered adult shortnose and Lost River suckers. Samples for the analysis of chlorophyll a and nutrients were collected at a subset of the water-quality monitor sites in each year. The seasonal pattern in the occurrence of supersaturated dissolved oxygen concentrations and high pH associated with photosynthetic activity, as well as the undersaturated dissolved oxygen concentrations associated with oxygen demand through respiration and decay in excess of photosynthetic production, were well described by the dynamics of the massive blooms of Aphanizomenon flos aquae (AFA) that occur each year. Data from the continuous monitors provided a means to quantify the occurrence, duration, and spatial extent of water-quality conditions potentially harmful to fish (dissolved- oxygen concentration less than 4 milligrams per liter, pH greater than 9.7, and temperature greater than 28 degrees Celsius) in the northern part of the lake, where the preferred adult sucker habitat is found. There were few observations of temperature greater than 28 degrees Celsius, suggesting that temperature is not a significant source of chronic stress to fish, although its role in the spread of disease is harder to define. Observations of pH greater than 9.7 were common during times when the AFA bloom was growing rapidly, so pH may be a source of chronic stress to fish. Dissolved oxygen concentrations less than 4 milligrams per liter were common in all 3 years at the deeper sites, in the lower part of the water column and for short periods during the day. Less common were instances of widespread low dissolved oxygen, throughout the water column and persisting through the entire day, but this was the character of a severe low dissolved oxygen event (LDOE) that culminated in the start of a fish die-off in 2003. Documented evidence indicates that LDOEs played a role in three fish die-offs in the mid-1990s as well. In the historical context of 15 years of climate and water-quality data, 3 out of 4 of the recent fish die-off years, 1996, 1997, and 2003, were characterized by low winds and high temperatures in July or August coincident with the start of the die-off. High temperatures accelerate the oxygen demanding processes that lead to a LDOE. The role of low winds remains inconclusive, but it could include the development of stratification in the water column and/or the alteration of the wind-driven circulation pattern. At a site centrally located in the study area, die-off years could be successfully identified in the historical data by screening for water characterized by exceptionally low chlorophyll a concentration, exceptionally low dissolved oxygen concentration throughout the water column (not just near the bottom), and exceptionally high ammonia concentration and water temperature, just prior to or coincident with the start of a fish die-off. These conditions indicate that a severe decline in the AFA bloom and conversion of most of the organic matter into inorganic form had taken place.

Scientific Investigations Report↗