Geology topics

M.S. Koo

Publications and source records attributed to M.S. Koo.

3 recordsLinked to original sources

USGS2024

Chytrid infections exhibit historical spread and contemporary seasonality in a declining stream-breeding frog

Species with extensive geographical ranges pose special challenges to assessing drivers of wildlife disease, necessitating collaborative and large-scale analyses. The imperilled foothill yellow-legged frog ( Rana boylii ) inhabits a wide geographical range and variable conditions in rivers of California and Oregon (USA), and is considered threatened by the pathogen Batrachochytrium dendrobatidis (Bd). To assess drivers of Bd infections over time and space, we compiled over 2000 datapoints from R. boylii museum specimens (collected 1897–2005) and field samples (2005–2021) spanning 9° of latitude. We observed a south-to-north spread of Bd detections beginning in the 1940s and increase in prevalence from the 1940s to 1970s, coinciding with extirpation from southern latitudes. We detected eight high-prevalence geographical clusters through time that span the species' geographical range. Field-sampled male R. boylii exhibited the highest prevalence, and juveniles sampled in autumn exhibited the highest loads. Bd infection risk was highest in lower elevation rain-dominated watersheds, and with cool temperatures and low stream-flow conditions at the end of the dry season. Through a holistic assessment of relationships between infection risk, geographical context and time, we identify the locations and time periods where Bd mitigation and monitoring will be critical for conservation of this imperilled species.

California↗

USGS2009

Quantifying ecological, morphological, and genetic variation to delimit species in the coast horned lizard species complex (Phrynosoma)

Lineage separation and divergence form a temporally extended process whereby populations may diverge genetically, morphologically, or ecologically, and these contingent properties of species provide the operational criteria necessary for species delimitation.We inferred the historical process of lineage formation in the coast horned lizard (Phrynosoma coronatum) species complex by evaluating a diversity of operational species criteria, including divergence in mtDNA (98 specimens; 2,781 bp) and nuclear loci (RAG-1, 1,054 bp; BDNF 529 bp), ecological niches (11 bioclimatic variables; 285 unique localities), and cranial horn shapes (493 specimens; 16 landmarks). A phylogenetic analysis of mtDNA recovers 5 phylogeographic groups arranged latitudinally along the Baja California Peninsula and in California. The 2 southern phylogeographic groups exhibit concordance between genetic, morphological, and ecological divergence; however, differentiation is weak or absent at more recent levels defined by phylogeographic breaks in California. Interpreting these operational species criteria together suggests that there are 3 ecologically divergent and morphologically diagnosable species within the P. coronatum complex. Our 3-species taxonomic hypothesis invokes a deep coalescence event when fitting the mtDNA genealogy into the species tree, which is not unexpected for populations that have diverged recently. Although the hypothesis that the 3 phylogeographic groups distributed across California each represent distinctive species is not supported by all of the operational species criteria evaluated in this study, the conservation status of the imperiled populations represented by these genealogical units remains critical.

Proceedings of the National Academy of Sciences of↗

USGS2008

Turning population trend monitoring into active conservation: Can we save the cascades frog (Rang cascadae) in the Lassen Region of California?

Monitoring the distribution, population size, and trends of declining species is necessary to evaluate their vulnerability to extinction. It is the responsibility of scientists to alert management professionals of the need for preemptive action if a species approaches imminent, regional extirpation. This is the case with Rana cascadae (Cascades Frog) populations near Lassen Peak From 1993 to 2007, we conducted 1,873 amphibian surveys at 856 sites within Lassen Volcanic National Park and Lassen National Forest, California, USA. These surveys encompassed all R. cascadae habitats: ponds, lakes, meadows, and streams on those lands. We found frogs at only six sites during 14 years of surveys, and obtained one report of a single frog at one additional locality. These sites represented < 1% of the historically suitable habitat within the Lassen region. The number of R. cascadae in the Lassen area has declined since 1991, and one population is now extirpated. We found no evidence of reproduction in most of the populations, and reproduction at all but one of the other sites remained lower than the annual reproductive output of one breeding pair for > 12 years. Causes for the decline remain unclear, but introduced trout, disease, and pesticides are likely factors. We recommend that (1) additional protection for R. cascadae within 50 km of Lassen Peak; (2) investigation of the genetics of R. cascadae in California; (3) research into the role of possible causative factors in these declines; and (4) implementation of a feasibility study to captive breed and reintroduce R. cascadae in the Lassen area. Copyright ?? 2008. Gary Fellers. All rights reserved.

Herpetological Conservation and Biology↗