Geology topics

Joshua K. Raabe

Publications and source records attributed to Joshua K. Raabe.

11 recordsLinked to original sources

USGS2025

Muskellunge spawning habitat characteristics and availability in Green Bay, Lake Michigan

Objective Habitat degradation has been associated with the loss of many self-sustaining Muskellunge Esox masquinongy populations, including those in Green Bay, where stocking has provided an exceptional trophy fishery but restoration goals include establishing self-sustaining populations and there is little evidence of natural recruitment. Our objectives were to determine whether (1) Muskellunge spawning locations and occurrence of successful hatching were related to a suite of habitat characteristics, (2) proportions of Muskellunge spawning in or outside of tributaries to lower Green Bay were different, and (3) Muskellunge showed spawning site fidelity. Methods From 2017 to 2019, adult Muskellunge ( N = 60) were surgically implanted with radio and acoustic transmitters to identify spawning locations, where we measured a suite of habitat variables and attempted to collect eggs and larvae. Side-scan sonar was used to quantify the amount of habitat available to Muskellunge for egg deposition in the Fox and Menominee rivers, which are tributaries to Green Bay. Results Muskellunge eggs were collected at 58 locations, but only two larvae were collected from a single location. Bottom slope, depth, distance to shore, gravel substrate, organic matter, and dissolved oxygen best predicted the presence of Muskellunge eggs. We determined that little habitat associated with Muskellunge egg deposition was available in the Fox and Menominee rivers. However, approximately half of tagged Muskellunge appeared to spawn outside of tributaries. Muskellunge in Green Bay displayed moderate spawning site fidelity. Conclusions Our results suggest that successful hatching occurs at very low levels and the lack of suitable Muskellunge spawning habitat in Green Bay tributaries may be limiting natural reproduction. Changes in spatial allocation of stocked fish and enhancement of known spawning locations may increase egg deposition and subsequent natural reproduction.

Michigan, Wisconsin↗

USGS2025

Estimating mortality of Lake Sturgeon in the Lake Winnebago system using traditional age-based approaches and capture–recapture models

Objective The Lake Winnebago system in Wisconsin supports a popular winter spear fishery for Lake Sturgeon Acipenser fulvescens . Setting harvest caps for this fishery relies on estimating instantaneous natural mortality rate ( M ), which can be done using age-based approaches or capture–recapture models that incorporate recoveries of fish with passive integrated transponder (PIT) tags or detections of fish with acoustic transmitters. Our objectives were to determine (1) if recent estimates of exploitation ( u ) have exceeded the 5% harvest cap, (2) if M and total mortality rates are similar among estimation methods that rely on age estimates or capture–recapture methods, and (3) if potential differences in mortality estimates would affect harvest caps. Methods Harvest of PIT-tagged fish was used to evaluate u from 2010 to 2019. Catch curves incorporating corrected fin ray ages were used to estimate total mortality and M for fish collected from 2010 to 2019. Capture–recapture models were used to estimate annual survival and M from detections of fish with acoustic transmitters from 2007 to 2019 and recoveries of PIT-tagged fish from 1999 to 2020. Mortality estimates were used to calculate and compare sex-specific harvest caps among estimation methods. Results Observed u did not exceed 5% for either sex between 2010 and 2019. Estimates of M varied among methods (males: M = 0.001–0.134; females: M = 0.001–0.131), with PIT-based models consistently providing the lowest and telemetry-based models providing the highest estimates. Simulations indicated that female u has limited potential to exceed 5% if M from fin ray ages or telemetry is used to set harvest caps, while PIT-based simulations showed no indication of cap exceedance. Conclusions Harvest management practices in the Lake Winnebago system appear to have kept Lake Sturgeon exploitation below the 5% harvest cap from 2010 to 2019. Capture–recapture models relying on PIT tags appear to provide the most precise approach for setting harvest caps for this fishery.

Wisconsin↗

USGS2022

Lake Sturgeon movement after trap and transfer around two dams on the Menominee River, Wisconsin-Michigan

Fish behavior after passage or transfer around dams is a critical component in determining whether the goals of these efforts are achieved, but these behaviors are often poorly understood. An elevator was constructed in the lowermost hydroelectric dam on the Menominee River, Wisconsin–Michigan; it is the first elevator specifically designed to capture Lake Sturgeon Acipenser fulvescens for upstream transfer above two dams, providing access to high-quality spawning and early life habitat. Our objectives were to determine whether (1) Lake Sturgeon transferred upstream remained upstream for at least one spawning opportunity; (2) spawning opportunity, time to reach the next dam upstream, and residency in different segments of the river were related to sex, capture method (elevator versus electrofishing), and season of transfer; and (3) the probability of fish transitioning back downstream of the two dams varied among months. We evaluated posttransfer behaviors of 139 Lake Sturgeon that were captured in the elevator or by electrofishing, implanted with acoustic transmitters, transferred upstream (in spring or fall) from fall 2014 to spring 2017, and monitored until fall 2018 using 20–23 stationary acoustic receivers deployed throughout the river. Most Lake Sturgeon (91%) remained upstream for at least one spawning opportunity. The probability of remaining for one spawning opportunity was not related to sex, fish capture method, or season of transfer. Residency times within the two impoundments and time to reach the next dam upstream varied among individual fish. A multistate model indicated that monthly survival after upstream transfer was high and that Lake Sturgeon typically remained above both dams in late fall to early spring, with most downstream movements occurring in April and May. Our results indicate that Lake Sturgeon transferred upstream have the potential to contribute offspring that may help to bolster the Lake Sturgeon population in Lake Michigan, but additional research may help in determining whether these contributions occur.

Michigan, Wisconsin↗

USGS2021

Pelagic forage versus abiotic factors as drivers of walleye growth in northern Wisconsin lakes

Understanding ecological relationships among fishes and their environments are important for informing management policies. We conducted a statewide assessment of cisco (Coregonus artedi) in inland lakes of Wisconsin to better understand the status of this pelagic, coldwater forage fish. We then used long-term (2005–2014), standardized walleye (Sander vitreus) survey data from the Ceded Territory of Wisconsin (CTWI) to test for the influence of cisco (present, extirpated, or never present) and several abiotic factors on walleye growth trajectories described using sex-specific asymptotic lengths (L∞), Brody growth coefficients (K), and time in years required to attain common length limits used to manage harvest of walleye in the recreational fishery (381 and 457 mm). Despite being top predators in many north-temperate waters, walleye growth was highly variable among lakes, suggesting that forage base and abiotic factors may be important drivers. Growth characteristics of 160 CTWI walleye populations revealed that females reached greatest L∞ in lakes with cisco compared to those where cisco were never present or those lakes where cisco have been extirpated; however, differences were not statistically significant. Male walleye L∞ did not differ based on cisco presence. Brody growth coefficients (K) for female walleye were positively correlated with growing degree days and Secchi depth; K for males was positively correlated with Secchi depth. Average time to attain 381 and 457 mm were lowest in lakes where cisco have been extirpated. Our results suggest that cooler water temperatures and lower water clarity may be more important drivers of walleye maximum growth potential in northern Wisconsin lakes than the presence of cisco.

Wisconsin↗

USGS2019

Brook trout (Salvelinus fontinalis) movement and survival after removal of two dams on the West Branch of the Wolf River, Wisconsin

Dam removals allow fish to access habitats that may provide ecological benefits and risks, but the extent of fish movements through former dam sites has not been thoroughly evaluated for many species. We installed stationary PIT antennas in 2016 and 2017 to evaluate movements and survival of brook trout Salvelinus fontinalis in the West Branch of the Wolf River (WBWR) in central Wisconsin following removal of two dams and channel modifications designed to promote fish movement. These changes provided access to lacustrine habitats that might provide suitable winter habitat or act as ecological sinks. We used multistate models to estimate transition probabilities between river sections, to determine whether brook trout: (a) moved between multiple river sections and (b) entered lacustrine habitats as seasonal refuges, but eventually returned to lotic habitat. We also used a Cormack-Jolly-Seber model to evaluate whether apparent survival of brook trout in the WBWR was comparable to other populations. Few fish moved among river sections or used lacustrine habitat (<5% of tagged fish); most brook trout remained in sections where they were initially tagged, potentially due to quality habitat located throughout the river. Like other studies, brook trout in the WBWR appear to experience high mortality based on low number of detections, few physical recaptures and an estimated eight-month apparent survival rate of 0.27. In scenarios where fish can already access suitable habitat, removal of dams may not result in substantial increases in fish movement and colonisation of newly accessible habitat may not occur immediately.

Wisconsin↗

USGS2014

Assessing distribution of migratory fishes and connectivity following complete and partial dam removals in a North Carolina River

Fish, especially migratory species, are assumed to benefit from dam removals that restore connectivity and access to upstream habitat, but few studies have evaluated this assumption. Therefore, we assessed the movement of migratory fishes in the springs of 2008 through 2010 and surveyed available habitat in the Little River, North Carolina, a tributary to the Neuse River, after three complete dam removals and one partial (notched) dam removal. We tagged migratory fishes with PIT tags at a resistance-board weir located at a dam removal site (river kilometer [rkm] 3.7) and followed their movements with an array of PIT antennas. The river-wide distribution of fish following removals varied by species. For example, 24–31% of anadromous American Shad Alosa sapidissima , 45–49% of resident Gizzard Shad Dorosoma cepedianum , and 4–11% of nonnative Flathead Catfish Pylodictis olivaris passed the dam removal site at rkm 56 in 2009 and 2010. No preremoval data were available for comparison, but reach connectivity appeared to increase as tagged individuals passed former dam sites and certain individuals moved extensively both upstream and downstream. However, 17–28% did not pass the partially removed dam at rkm 7.9, while 20–39% of those that passed remained downstream for more than a day before migrating upstream. Gizzard Shad required the deepest water to pass this notched structure, followed by American Shad then Flathead Catfish. Fish that passed the notched dam accessed more complex habitat (e.g., available substrate size-classes) in the middle and upper reaches. The results provide strong support for efforts to restore currently inaccessible habitat through complete removal of derelict dams.

North Carolina↗

USGS2014

American shad migratory behavior, weight loss, survival, and abundance in a North Carolina River following dam removals

Despite extensive management and research, populations of American Shad Alosa sapidissima have experienced prolonged declines, and uncertainty about the underlying mechanisms causing these declines remains. In the springs of 2007 through 2010, we used a resistance board weir and PIT technology to capture, tag, and track American Shad in the Little River, North Carolina, a tributary to the Neuse River with complete and partial removals of low-head dams. Our objectives were to examine migratory behaviors and estimate weight loss, survival, and abundance during each spawning season. Males typically immigrated earlier than females and also used upstream habitat at a higher percentage, but otherwise exhibited relatively similar migratory patterns. Proportional weight loss displayed a strong positive relationship with both cumulative water temperature during residence time and number of days spent upstream, and to a lesser extent, minimum distance the fish traveled in the river. Surviving emigrating males lost up to 30% of their initial weight and females lost up to 50% of their initial weight, indicating there are potential survival thresholds. Survival for the spawning season was low and estimates ranged from 0.07 to 0.17; no distinct factors (e.g., sex, size, migration distance) that could contribute to survival were detected. Sampled and estimated American Shad abundance increased from 2007 through 2009, but was lower in 2010. Our study provides substantial new information about American Shad spawning that may aid restoration efforts.

North Carolina↗

USGS2013

A spatial capture-recapture model to estimate fish survival and location from linear continuous monitoring arrays

We developed a spatial capture–recapture model to evaluate survival and activity centres (i.e., mean locations) of tagged individuals detected along a linear array. Our spatially explicit version of the Cormack–Jolly–Seber model, analyzed using a Bayesian framework, correlates movement between periods and can incorporate environmental or other covariates. We demonstrate the model using 2010 data for anadromous American shad ( Alosa sapidissima ) tagged with passive integrated transponders (PIT) at a weir near the mouth of a North Carolina river and passively monitored with an upstream array of PIT antennas. The river channel constrained migrations, resulting in linear, one-dimensional encounter histories that included both weir captures and antenna detections. Individual activity centres in a given time period were a function of the individual’s previous estimated location and the river conditions (i.e., gage height). Model results indicate high within-river spawning mortality (mean weekly survival = 0.80) and more extensive movements during elevated river conditions. This model is applicable for any linear array (e.g., rivers, shorelines, and corridors), opening new opportunities to study demographic parameters, movement or migration, and habitat use.

North Carolina↗

USGS2012

Quantity, structure, and habitat selection of natural spawning reefs by walleyes in a north temperate lake: A multiscale analysis

Spawning habitat, the cornerstone of self-sustaining, naturally reproducing walleye Sander vitreus populations, has received limited quantitative research. Our goal was to quantitatively describe the structure and quantity of natural walleye spawning habitat and evaluate potential selection of habitat in Big Crooked Lake, Wisconsin. In 2004 and 2005, we located and delineated walleye egg deposition polygons through visual snorkel and scuba surveys. We also delineated recently deposited, adhesive egg patches daily along one spawning reef in 2005. To determine habitat selection, we quantified and compared spawning and lakewide available habitat at different scales. In both years, walleyes used similar spawning habitat, including three geomorphic types: linear shorelines, a point bar, and an island. Walleyes used only 14% of the entire lake shoreline and 39% of the shoreline comprised of gravel (6.4–76.0 mm), cobble (76.1–149.9 mm), or coarser substrates for spawning in 2005, indicating selection of specific spawning habitat. Lakewide, walleyes spawned close to shore (outer egg deposition polygon boundary mean distance = 2.7 m), in shallow water (outer egg deposition polygon boundary mean depth = 0.3 m), and over gravel substrate (percent coverage mean = 64.3) having low embeddedness (mean = 1.30). Our best nearshore (0–13-m) resource selection function predicted an increase in the relative probability of egg deposition with the increasing abundance of gravel, cobble, and rubble (150.0–303.9-mm) substrates and a decrease with increasing distance from shore and water depth (89.9% overall correct classification). Adhesive egg patches confirmed that walleyes actively chose nearshore, shallow-water, and coarse-substrate spawning habitat. The quantitative habitat information and predictive models will assist biologists in developing walleye spawning reef protection strategies and potentially aid in designing and evaluating artificial spawning reefs.

Wisconsin↗

USGS2012

A Bayesian spawning habitat suitability model for American shad in southeastern United States rivers

Habitat suitability index models for American shad Alosa sapidissima were developed by Stier and Crance in 1985. These models, which were based on a combination of published information and expert opinion, are often used to make decisions about hydropower dam operations and fish passage. The purpose of this study was to develop updated habitat suitability index models for spawning American shad in the southeastern United States, building on the many field and laboratory studies completed since 1985. We surveyed biologists who had knowledge about American shad spawning grounds, assembled a panel of experts to discuss important habitat variables, and used raw data from published and unpublished studies to develop new habitat suitability curves. The updated curves are based on resource selection functions, which can model habitat selectivity based on use and availability of particular habitats. Using field data collected in eight rivers from Virginia to Florida (Mattaponi, Pamunkey, Roanoke, Tar, Neuse, Cape Fear, Pee Dee, St. Johns), we obtained new curves for temperature, current velocity, and depth that were generally similar to the original models. Our new suitability function for substrate was also similar to the original pattern, except that sand (optimal in the original model) has a very low estimated suitability. The Bayesian approach that we used to develop habitat suitability curves provides an objective framework for updating the model as new studies are completed and for testing the model's applicability in other parts of the species' range.

Florida, Georgia, North Carolina, South Carolina, ↗

USGS2011

Walleye and sauger habitat

No abstract available.

Book chapter↗